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Results for job emboss_needle-I20230301-093933-0160-

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########################################
(https://www.ebi.ac.uk/data-
# Program: needle
protection/privacy-notice/embl-ebi-
# Rundate: Wed 1 Mar 2023 09:34:01
# Commandline: needle
# public-website)
-auto and Terms of Use
# (https://www.ebi.ac.uk/about/terms-of-
-stdout
# -asequence emboss_needle-I20230301-093933-0160-93429071-p1m.asequence
# use).
-bsequence emboss_needle-I20230301-093933-0160-93429071-p1m.bsequence
# -datafile EDNAFULL
# -gapopen 10.0
# -gapextend 0.5
# -endopen 10.0
# -endextend 0.5
# -aformat3 pair
# -snucleotide1
# -snucleotide2
# Align_format: pair
# Report_file: stdout
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: M95529.1
# 2: NM_001833.4
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 3481
# Identity: 781/3481 (22.4%)
# Similarity: 781/3481 (22.4%)
# Gaps: 2483/3481 (71.3%)
# Score: 1067.0
#
#
#=======================================

M95529.1 1 GGATCCTCGTCCCTGGAGTCTGACACTGCTAGACACCTGGGCTTGGGTGG 50

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 51 GCCAAAGCGAAGGCCTGACTATAGTGAGGCAGAGAGGCCCCAAGTACACA 100

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 101 GAATGTAAGCAGGCACTCACACCATAGGTCCCTCTCTTGCCTTGGATTCG 150

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 151 TCCAGGCACTGCCAGGAGCTCAAGACACAAGGGCAGCCACCCTTACCCAC 200

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 201 TGCTTATGTGGCATATGGGAATATACAATATAAATATATTCTTATAATTG 250

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 251 TATATAATAATGTTTATATATATGTAACACATAAATGTGTATTAATTCCA 300

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 301 ACCCTCACAACTCTTTAAATTATCCCTTAGTTGACAGATAAGATGAAAGG 350

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 351 CAGAATAGTTGGAACAGATAGTAAGTTTGCCTCACTAATAACTTGTACAC 400

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 401 AGTCCATACTCTTAACCACGATGCAACACAATTATCACCAACACACACAC 450

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 451 ACACACACACACACACACACACACACACGAAAAAGGCCACCAGGTACTCA 500

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 501 CCCAGTTTCCTTATCAGGAACCGCCCCACAGCAGATTGGCCACAGCTGTG 550

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 551 CCTCTGCCCACGGCCAGCCCTGTGGGATGCAGGTGGATCTCGTGAGGTCA 600

NM_001833.4 1 -------------------------------------------------- 0
M95529.1 601 GGGCCCCTTTTATAGCCCCATCACCACAGCTGGCTCTGTCTCCCGCCACC 650

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 651 CACACCAGCTGTCCCACTCACCATGGAGAAGATCCTGATCCTCCTGCTTG 700

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 701 TCGCCCTCTCTGTGGCCTATGCAGCTCCTGGCCCCCGGGGGATCATTATC 750

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 751 AACCTGGTAAGAGGGTCTTCAGGGGAGGCGCCTCCTGAGTCCCCAGATGA 800

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 801 AGACTTCCTAAGCTTGGACCTTGACCTCTGATGTCTCCACCTGGACTGGC 850

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 851 AGGGGCTGGGAGGAGTGGCATCTTGCATCCCTCTGTTTACTTCCATGTCC 900

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 901 TGTCCTATGCCTCTTCCCAGAGGCCACAGGAAAGGCTGATCAGCCCTCTC 950

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 951 CAGCTCCAACTGGCGAATGCTCAGAGCAGCAGTCCAACCTGGCTATGAGG 1000

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 1001 GACCTTTTTTTTCTTTTTTTTCTTTTTGAAACGGAGTCTTGCTCTGTCAC 1050

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 1051 CAGGCTGGAGTGTAGTGGCACAATCTCGGCTCACTGCAATCTCTGCTCCC 1100

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 1101 GGGTTCAAATGATTCTCCTGCCTCAGCCTCCCAAGAAGCTGGGATTACAG 1150

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 1151 GTGCCTGCCATAACGCTCAGCTATTTTTTGTATTTTTAGTAGAAATAGGG 1200

NM_001833.4 1 -------------------------------------------------- 0

M95529.1 1201 TTTCACCATGTTGCCCAGGCTAGTCTCAAACTCCTGAC-CTCGTGATCCG 1249

||...||.||| ||||| .||||||.| ||.||
NM_001833.4 1 -----CCGCTTTACCC------GTCTC--CCTCCTGGCGCTTGT------ 31

M95529.1 1250 CCCACCTCGGCCTCCCAAAGTGTCGGGATTACAGGCTAGAGCCACCTCAC 1299

||.||| |||||| ||||| ||||.||
NM_001833.4 32 -CCTCCT----CTCCCA----GTCGG----------------CACCACA- 55

M95529.1 1300 CTGGCCTACGAGGGAGCTTTGTAAAAATCCAGAGCCCTGGGCTTCCTCCT 1349

|.||..||| ||| ||||.|
NM_001833.4 56 ---------GCGGTGGCT---------------GCC--GGGCGT------ 73

M95529.1 1350 GAGAAAATGCTTTGCGCCAATCATTCCAGCT-TCTGACTTATGGAGATGC 1398

|.| || |.||.
NM_001833.4 74 ----------------------------GGTGTC-----------GGTGG 84
M95529.1 1399 CTCGGAGATGTTTACTCATTCTGTTCTCATAATAACCACTGAGGGAGGTG 1448
.||| |.||.| ||.|| |||| ||| |..||||
NM_001833.4 85 GTCG--GTTGGT------TTTTG-TCTC------ACC------GTTGGTG 113

M95529.1 1449 TTTTCAGAGTCAGCCCTGTC-TTCAGACAGAGAGAGGGTGAGCAACCTGC 1497

| ||.||.| ||||| .|||
NM_001833.4 114 T------------CCGTGCCGTTCAG--------------------TTGC 131

M95529.1 1498 CTGAGGTCACATAGCTGGAAAG-TGGTTCAGCT-GGGGCCCCACCACTGC 1545

|.| .|||.|||| || |||.||.|.| ||.|||| ||||
NM_001833.4 132 CCG-----CCATGGCTG---AGCTGGATCCGTTCGGCGCCC-----CTGC 168

M95529.1 1546 CCCACACCACCTCTCCACCATGGCTGGACTTGGAGGTCCAGGACCCTTGG 1595

| ||| |..|.|||.|||||.| |.||
NM_001833.4 169 C--------------------GGC-GCCCCTGGCGGTCCCG--CGCT--- 192

M95529.1 1596 AGATTATAGATCAGATCTGTTGGGGGAGGAAGGAGTCTTGCAGGGAGATG 1645

||||| |.|||| |.||.||
NM_001833.4 193 ----------------------GGGGA--ACGGAG--TGGCCGG------ 210

M95529.1 1646 CAATCTTCACCGCCTCCTTAAAGAGGTGTGGGACCCAGAGTGGTTTGGAG 1695

|.|||.| .|||| .||||| ||.|
NM_001833.4 211 -------CGCCGGC-----GAAGA------AGACCC-----GGCT----- 232

M95529.1 1696 AACTTGTCTAGGGGCCTTGTGTGCACATTCCAAATGGGAACACTGAGGCT 1745

|.|||||| ||
NM_001833.4 233 ----------GCGGCCTT------------------------------CT 242

M95529.1 1746 TGGGAGGCAGTGACTTGCCCAGAGTCACACAG-GAGGTTGGTAGCACAGC 1794

||| .|||| |.|||| || |||.|| ||
NM_001833.4 243 TGG--CGCAG--------CAAGAG------AGCGAGATT---------GC 267

M95529.1 1795 CGGTA-CTAGAACCCAGGGTCCTGACCCTCTGTGCAAGTCTGCTTCTCTG 1843

.||.| |.||||| || |.||.| ||||.|
NM_001833.4 268 GGGCATCGAGAAC----------GA---------CGAGGC--CTTCGC-- 294

M95529.1 1844 TCACCGCATGCCCACTTCTCACGTGGGTGGGGGCACAGAGGCCACCAGAC 1893

||| |.|||..||.||| |||.||.|.|
NM_001833.4 295 ------CAT------------CCTGGACGGCGGC------GCCCCCGGGC 320

M95529.1 1894 CCAGGGGATGGACTCCTTCACACACATCCCTACCAGGGGAGACACTGTTA 1943

|| ||.||..|| ||.|||.|.|.|
NM_001833.4 321 CC----------------------CAGCCGCAC--GGCGAGCCGCCG--- 343

M95529.1 1944 GTGGTAGTGTGTGGTGGGTACAGGTCTGAATGGAGAAGGGACCTGAGGGA 1993

||| ||||.|.|||..| .|||.|||
NM_001833.4 344 ---------------GGG----GGTCCGGATGCTG-------TTGATGGA 367

M95529.1 1994 GTGGGGCCTGGGCTGACTGGCTGCTCCTGGCAGGAGAACGGTGAGCTCTG 2043

||
NM_001833.4 368 GT------------------------------------------------ 369

M95529.1 2044 CATGAATAGTGCCCAGTGTAAGAGCAATTGCTGCCAGCATTCAAGTGCGC 2093

.||||||.||| |.|.||.||||.| ||||
NM_001833.4 370 AATGAATGGTG---------------AATACTACCAGGA---AAGT---- 397

M95529.1 2094 TGGGCCTGGCCCGCTGCACATCCATGG-CCAGCGAGAACAGCGAGT---- 2138

.|||| || |||||..|||
NM_001833.4 398 ----------------------AATGGTCC------AACAGACAGTTATG 419

M95529.1 2139 --GCTCTGTCA-AGGTGGGTGCCTGAGGACTTGGCGTGGGTGGGGGAGAA 2185

|||.|.||| |.|||| |
NM_001833.4 420 CAGCTATTTCACAAGTGG-------------------------------A 438
M95529.1 2186 TGG---GGAGT-AGGGCCCTGAACACTTGTGAGTGGGATCAGGGAGGGGG 2231
|.| |.||| ||.| |||||| ||| |||.|
NM_001833.4 439 TCGATTGCAGTCAGAG-CCTGAA--------AGT---ATCCG-------- 468

M95529.1 2232 GTCAGCCTGGACACTGAATGTTGAGGAGACGAGAGGGAGGTCGACAGGTG 2281

|.||||..|||.|||..|.|.||| |.|..
NM_001833.4 469 --------------TAAATGGAGAGAAGAACAAATGGA-------ACGCT 497

M95529.1 2282 TCAAAGCACTTTCCCATCCCATCATCTCTCTTGACCCTCCCGAGTGACCA 2331

|..||||.|||
NM_001833.4 498 TGGAAGCCCTT--------------------------------------- 508

M95529.1 2332 GTGAGATGGGTGGGGTGGATTTGTTATCCCATTTCATGGCTGGGTAAATA 2381

|||| ||.||| ||.||.|...|
NM_001833.4 509 ----GATG-------------------CCAATT------CTCGGAAGCAA 529

M95529.1 2382 GAGGCTCCCCAGAGAGATCAAGCTAGTAAGA----GC--TAAATGAGCCA 2425

||.| ||||| |.|.|||| || ||||.||||.|
NM_001833.4 530 GAAG-----CAGAG---------TGGAAAGAAAAGGCAATAAAGGAGCTA 565

M95529.1 2426 GAGCAGAGGTCAGAGCTGGGGTCTCCAGGGCCCACGGCACCCCTGGGGAG 2475

|| ||| ..|||.|.||.| ||.|.|| ||
NM_001833.4 566 GA--AGA----------ATGGTATGCAAG----ACAGGAC-------GA- 591

M95529.1 2476 GCAGGTGGGAGAGGCACTCCCCGAAAACACAGGCTGGCCTACTGGTTCTC 2525

||||.| .|.|||||||.|.|| ...|.||
NM_001833.4 592 GCAGCT-------------ACAGAAAACAAAAGC-AAACAAC-------- 619

M95529.1 2526 TAGGTCAGGCAGGGACAAGTGATGTCCAAAGTATCTCCCCATAGCCT--- 2572

|||.|| |||| ||| .|||||
NM_001833.4 620 -AGGGCA-GCAG----AAG----------------------AAGCCTTTG 641

M95529.1 2573 ----TGACTCCATTGGCTGTGTC-TCTGCAGACGCTCTATGGGATTTACT 2617

||| |||||.| |.||| ||..|||.|.||...|||||
NM_001833.4 642 TAAATGA---CATTGAC-GAGTCGTCCCCAGGCACTGAGTGGGA------ 681

M95529.1 2618 ACAAGTGTCCC-----TGTGAGCGTGGCCTGACCTGTGAGGGAGACAAGA 2662

||..|||.||| ||||| |.| |.||| .||||
NM_001833.4 682 ACGGGTGGCCCGGCTGTGTGA-CTT----TAACC----------CCAAG- 715

M95529.1 2663 CCATCGTGGGCTCCATCACCAACA--CCAACTTTGGCATCTGC--CATGA 2708

||.|.|| |.|| ||||...|| |||.| ||||
NM_001833.4 716 -----------TCTAGCA--AGCAGGCCAAAGATG---TCTCCCGCATG- 748

M95529.1 2709 CGCTGGACGCTCCAAGCAGTGAGACTGCCCACC-CA-CTCCCACACCTAG 2756

|||| |||| || || |||||.|| ||
NM_001833.4 749 CGCT------------CAGT-----------CCTCATCTCCCTCA---AG 772

M95529.1 2757 CCCAGAATGCTGTAGGCCACTAGGCGCAGGGGCATCTCTCCCCTGCTCCA 2806

| ||||| .|||.||.||| ||..|
NM_001833.4 773 C------------AGGCC-----CCGCTGGTGCA-----------CTGAA 794

M95529.1 2807 GCGCATCTCCCGGGCTGGCCAC-CTCCTTGACCAGC-ATATCTGTT---- 2850

|.|| |.|||.| |||..|| ||.| |.|.|| ||||| ||
NM_001833.4 795 GAGC--CACCCTG--TGGAAACACTAC---ATCTGCAATATC--TTAATC 835

M95529.1 2851 -TTCTGATTG-CGCTCTTCACA--------ATTAA--------AGGCCTC 2882

|.||.|.|| .|||||||||| ||||| ||..||.
NM_001833.4 836 CTACTCAGTGAAGCTCTTCACAGTCATTGGATTAATTATGTTGAGTTCTT 885

M95529.1 2883 CTG---CAAACCTTTCCCAGTCT-----CCTGCATATTCTTTCTGACTCA 2924

.|| ||||||||| ..|||| ..||...|||.|||.|||.|
NM_001833.4 886 TTGGACCAAACCTTT--TTGTCTTTAGAGTTGTTCATTGTTTGTGATT-- 931
M95529.1 2925 GCATCTTCTCTGAAGTTGCATCAGGCCTTTGGTCCACCAGGGCAGGCTTC 2974
||||.||..| ||.|.||| .||.| ||.|.||..|||| |||
NM_001833.4 932 GCATGTTTCC-----TTCCTTCA--ACTGT-GTTCTCCCTGGCA---TTC 970

M95529.1 2975 AGGCAGGTCAGAAGAACAAGGGATGGGTCTGGGGCTGAAGAAGTTGTGGC 3024

||..||| ||||| ||
NM_001833.4 971 AGAGAGG-----------AGGGA-------------GA------------ 984

M95529.1 3025 CAAACAGATTGGAGACTGAAGACAAAGCTGTGAAGGAGACCCAGCCAGCC 3074

|||| ||||| .|||||.|
NM_001833.4 985 ----------GGAG---GAAGA--------GGAAGGGG------------ 1001

M95529.1 3075 TAGGAAACCT--CCATTTCTGGGGAGAATGCACACCTACCGGTAGCCCTC 3122

|||.||.|| ||| ||| |||| ||||
NM_001833.4 1002 -AGGGAAGCTTCCCA---------AGA--------------GTAG-CCTC 1026

M95529.1 3123 --CTTGTTCCGGTTCCAAAGAGACAAGCGGGCACATGTGCATGCGCGCGC 3170

|.||| |.||| |||||||
NM_001833.4 1027 AACCTGT---GCTTC--------------------TGTGCAT-------- 1045

M95529.1 3171 ACATACACACACACACACACACACACACACACACACACTTGTGGGTAAGG 3220

|| ||.||.| ||..
NM_001833.4 1046 ---TA---------------------------------TTCTGAG-AATA 1058

M95529.1 3221 AGTTTTAATGGCCCATGTTCGTCACCCTGCATCAGAGGCATCAGAATCCT 3270

|.||| .|||| |||..|||.|
NM_001833.4 1059 AATTT---------CTGTT--TCAAACTGTA------------------- 1078

M95529.1 3271 GGGCTCTCACCTCTTTTCTGGACACAATTCTCAAATATGACAGCTAGCTG 3320

NM_001833.4 1079 -------------------------------------------------- 1078

M95529.1 3321 ACACAACTCATGTGTTAAGGGGTCAGACCACTCTCAATTGCTATGAGCTT 3370

NM_001833.4 1079 -------------------------------------------------- 1078

M95529.1 3371 ACTCTCTGCCAGCAAATGCTCACAAGGATCC 3401

NM_001833.4 1079 ------------------------------- 1078

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