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ELSEVIER Sedimentary Geology 126 (1999) 205–222

Bacterially mediated formation of diagenetic aragonite and native


sulfur in Zechstein carbonates (Upper Permian, Central Germany)
J. Peckmann a,Ł , J. Paul a , V. Thiel b
a Institut und Museum für Geologie und Paläontologie, Georg-August-Universität, Goldschmidtstrasse 3, D-37077 Göttingen, Germany
b Institut für Biogeochemie und Meereschemie, Universität Hamburg, Bundesstrasse 55, D-20146 Hamburg, Germany

Received 9 March 1998; accepted 3 March 1999

Abstract

Neoformed diagenetic aragonite associated with organic-rich aggregations and native sulfur occur within cavities of the
Ca2 and Ca3 Zechstein carbonates in Central Germany. The cavities were formerly filled with gypsum. Bacterial sulfate
reduction favored the precipitation of the carbonate phase. This can be attributed to an increase in alkalinity accompanied
with sulfate reduction. The high Sr concentrations of the neoformed aragonites compared to the low concentrations in
the carbonate host rocks point to sulfate dissolution as the cation supplying process for the precipitation of aragonite.
Low δ13 C values ( 10‰ PDB) of the aragonite indicate that some of its carbon is derived from organic matter that
has been oxidized by bacterial sulfate reduction. Aragonite inclusions bear rhomb-shaped crystals of calcite, replacing
former dolomite. Elevated Mg=Ca ratios due to this dedolomitization may have promoted the precipitation of aragonite
instead of calcite. The aragonite precipitated in the near-surface meteoric–vadose zone in recent times. Aragonite crystals
display a platy habit. SEM analyses show that two types of micro-rods are associated with these plates. The mineralized
micro-rods are interpreted to be fossilized bacteria. Aragonite inclusions, most of which contain organic-rich aggregations,
yield a distinctive biomarker pattern. High concentrations of specific unsaturated fatty acids are clearly indicative of newly
produced organic matter and reflect the presence of a discrete microbial community being associated with the formation
of the aragonite. At one of the studied localities the aragonite is accompanied by native sulfur. The formation of sulfur
was mediated by H2 S-oxidizing bacteria. This is corroborated by the presence of densely packed curved rods representing
permineralized bacterial cells on and within the sulfur.  1999 Elsevier Science B.V. All rights reserved.

Keywords: aragonite; sulfur; bacteria; gypsum replacement; Zechstein; Germany

1. Introduction known example are the carbonates recognized in the


Permian evaporites of the Castile and Salado For-
A strong link between gypsum deposits and neo- mations from the Delaware Basin. These carbonates
formed carbonate minerals is well established in the have been interpreted as replacing gypsum and an-
literature. Diagenetic carbonates have been reported hydrite (Davis and Kirkland, 1979; Kirkland and
from sulfate-dominated host rocks and soils. A well Evans, 1976) and are associated with biogenic sul-
fur (Hentz and Henry, 1989). Similar associations of
Ł Corresponding
author. Fax: C49 551 397918; E-mail: diagenetic carbonates (calcite, aragonite, dolomite,
jpeckma@gwdg.de and magnesite) and sulfur deposits like these Amer-

0037-0738/99/$ – see front matter  1999 Elsevier Science B.V. All rights reserved.
PII: S 0 0 3 7 - 0 7 3 8 ( 9 9 ) 0 0 0 4 1 - X
206 J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222

ican examples occur on the Gemsa Peninsula on the gypsum) and aragonite are forming (Podwojewski,
west coast of the Gulf of Suez in a cap rock of 1995). However, Laya et al. (1992) and Podwojew-
a diapir (Pierre and Rouchy, 1988; Youssef, 1989). ski (1995) do not presume that carbonate precipita-
The δ18 O values of the carbonates indicate that the tion might be mediated by soil bacteria. Both soil
replacement of sulfate minerals by carbonates took bacteria and soil fungi were found to precipitate cal-
place at both an early and late diagenetic stage cite when cultured on a Ca-rich medium (Boquet
(Pierre and Rouchy, 1988; Youssef, 1989). In the et al., 1973; Monger et al., 1991). Applying the
case of the Tripoli Formation in Sicily, replacement ‘biomarker-concept’, Newman et al. (1997) demon-
occurred very soon after deposition (McKenzie et al., strated that calcites formed in fractures in the vadose
1979/1980; McKenzie, 1985). Sulfur within lagoonal zone were derived from microbial activity. The au-
evaporite–carbonate sequences in Sicily has been in- thors suppose that the precipitation of other types of
terpreted to be of biogenic origin (Dessau et al., pedogenic calcites is also controlled biologically.
1962). The process of transforming sulfate minerals Aragonite aggregations within Zechstein carbon-
in the presence of petroleum to carbonate miner- ates are known as ‘Schaumspat’ (Köhler, 1930). It
als and native sulfur is attributed to sulfate-reducing is described as a leafy and loose pseudomorphism
bacteria (Thode et al., 1954). of aragonite after gypsum. Köhler suggested that
Carbonate replacement of gypsum is not restricted the aragonite formed during burial diagenesis with
to marine sediments, but occurs likewise in lacustrine enhanced pressure and temperature. In this paper
environments. Calcite and dolomite pseudomorphs we report on neoformed aragonite and native sulfur
after aragonite crystals occur embedded in paleo– in a vadose–meteoric environment within Zechstein
lacustrine sediments of the rift basins on the east carbonates. Petrographic and stable isotope analyses
coast of North America (Triassic–Jurassic; Riccioni indicate that diagenesis was mediated by biologi-
et al., 1996). Much of the original crystal form is cal processes involving sulfate-reducing and sulfur
still preserved. Formation of aragonite is attributed bacteria.
to the release of CO2 by bacterial decomposition of
organic matter. Elevated Mg=Ca ratios were found to
be crucial for the preferential formation of aragonite 2. Geological setting and stratigraphy
over calcite (Riccioni et al., 1996). In the lacustrine
deposits of the Miocene Teruel and Cabriel Basins, Sediments of the Upper Permian Zechstein Group
gypsum is replaced by aragonite and calcite (Anadón crop out in a small belt south of the Variscan Harz
et al., 1992). Replacement occurred soon after de- Mountains in Central Germany (Fig. 1). The Zech-
position in the Libros gypsum (Teruel Graben), re- stein Basin is a giant evaporite–carbonate basin in
spectively at shallow burial depths in contact with which huge masses of rocksalt and sulfate (anhy-
meteoric waters (Cabriel Basin). Sulfate reduction is drite and gypsum), and smaller amounts of carbonate
believed to be the driving mechanism for carbonate were deposited. Evaporitic cycles, which document
precipitation in the Libros gypsum, which is sup- the changing conditions within the basin, were used
ported by the high content of organic matter and the to establish a stratigraphic division of the Zechstein
associated native sulfur (Anadón et al., 1992). (Richter-Bernburg, 1955). Each cycle starts with ei-
Sulfate-rich soils are another reactor for the neo- ther a clay (T) or carbonate (Ca) horizon, both
formation of carbonates. In soils derived from gyp- deposited under normal marine conditions. These
sum-bearing Keuper strata in east-central Spain, fi- horizons are overlain by sulfate (A) and rocksalt
brous radial aragonite nodules are common (Laya (Na) deposits, which precipitated from hypersaline
et al., 1992). The quality of preservation of the waters more or less isolated from the open sea.
nodules decreases downward, indicating that arago- During the Mesozoic, an overburden of several kilo-
nite formation is a very recent near-surface process. meters of clastic and carbonate rocks accumulated
Within gypsum-bearing horizons in soil profiles in in this area. This resulted in the conversion of the
the Tamoa Valley on the western coast of New Cale- gypsum deposits to anhydrite. Beginning in the Late
donia, calcite (in situ pseudomorphs after lenticular Cretaceous, the evaporites were uplifted and exposed
J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222 207

Fig. 1. Geological sketch map of the Harz Mountains in Central Germany with the localities of aragonite occurrences.

to surface conditions. The humid climate of Central platform. The rocksalt of this cycle (Na2), which
Europe favors the dissolution of the rocksalt to a once filled up the basin, has been dissolved in the
depth of several hundred meters and the near-surface study area. The third evaporitic cycle starts with
reconversion of anhydrite to gypsum. claystones and thin carbonate beds (Ca3), which
During the deposition of evaporites, the central have a uniform thickness, like the overlaying sulfate
part of the Zechstein belt south of the Harz Moun- (A3) which terminates the evaporite sequence south
tains was influenced by a palaeo-high, the Eichsfeld of the Harz Mountains.
High (Paul, 1993). The evaporite accumulation from
the first cycle (A1) is strongly influenced by this 2.1. Walkenried
high. Here, a thick succession of shallow water gyp-
sum was deposited, generating a sulfate platform Aragonitic inclusions within the second cycle car-
(Fig. 2). The carbonates of the second cycle (Ca2) bonate (Ca2) were collected 3 km southwest of the
draped this platform. The Ca2 oolitic grain- and village of Walkenried. Unfortunately, these strata are
packstones on the platform, which reach more than not well exposed; therefore the exact position of the
50 m in thickness, pass basinward into thin-bedded inclusions in the carbonate sequence is not clear.
mud- and wackestones. The edge of the platform is Palaeogeographically, the rocks were deposited on
characterized by an intense brecciation of the carbon- top of the Eichsfeld High (Fig. 2). They consist
ate, due to early slumping and sliding processes. The of about 50 m of oolitic and oncolitic grain- and
pre-existing differences in the platform and basin packstones (dolomites and dedolomites).
facies were intensified by variable diagenesis and
resulted in two different lithologies. The Ca2 unit of 2.2. Mühlberg
the platform is preferentially dolomitic, whereas the
basinal facies was converted to dedolomite (Clark, Aragonite occurrences of the Mühlberg locality
1980; Huttel and Mausfeld, 1991). are found near the top of an abandoned quarry at
The sulfate of the second cycle (A2) is up to 50 the northwestern margin of the village of Nieder-
m thick in the basin and wedges out on top of the sachswerfen, north of Nordhausen. They are also
208 J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222

Walkenried
Mühlberg
A B
0
Alter
Stolberg
200

400
m 5 km

Fig. 2. Stratigraphic and palaeogeographic position of the host rocks containing neoformed aragonite on the eastern slope of the Eichsfeld
Palaeo-High. Ca1 D first cycle carbonate; A1 D first cycle sulfate; Ca2 D second cycle carbonate; A2 D second cycle sulfate; T3 D third
cycle clay; Ca3 D third cycle carbonate; A3 D third cycle sulfate.

embedded in second cycle carbonates (Ca2), which Fluorescence microscopy was carried out on a Zeiss
were deposited at the steep eastern slope of the Axiolab (lamp: HBO 50; filter: BP 450-490 FT 510
Eichsfeld High. As a consequence of this, the car- LP 520). Thin sections and polished rocks were
bonate sequence consists of sedimentary breccias stained with combined potassium ferricyanide and
in the lower part, followed by fossiliferous wacke- alizarin red, dissolved in 0.1% HCl solution (Fücht-
stones, which are overlain by oncolitic and peloidal bauer, 1988, pp. 240–241), and with Feigl’s solution
dolomite bearing the aragonite inclusions. Today the to stain aragonite (Feigl, 1958). SEM analyses were
Ca2 crops out in a steep slope of 50 m in height with performed with gold-coated samples using a Hitachi
the Bere Creek at its base, indicating that the recent S-2300. A LEO 1530 Gemini was used for field-
water table is almost 50 m below the occurrences of emission (FE)–SEM analyses on uncoated samples.
neoformed aragonite. Mineralogy was determined by X-ray diffraction on
unoriented slurries using a diffractometer with CuKa
2.3. Alter Stolberg radiation (Philips PW 1800). Chemical composition
was measured by atomic absorption spectrometry
The aragonite inclusions of the Alter Stolberg area (AAS) on a Philips PU 9200X. Samples for car-
were found between the villages of Steigerthal and bon and oxygen stable isotope ratios were taken
Stempeda, northeast of Nordhausen. In contrast to from polished slabs using a hand-held microdrill.
the other occurrences, aragonite is hosted in carbon- CO2 was liberated by the standard phosphoric acid
ates of the third evaporite cycle (Ca3). The Ca3 has technique (McCrea, 1950) at 75ºC. Isotope mea-
a thickness of a few meters and consists of alternat- surements were made with a Finnigan Mat 252
ing well-bedded grayish, platy calcitic mudstones, mass spectrometer, using a Carbo-Kiel carbonate
massive limestones and grayish marly claystones. preparation technique, at the University of Erlan-
The limestones are porous due to the dissolution gen. The δ13 C and δ18 O results are reported rela-
of gypsum nodules. The aragonite occurs in these tive to the PDB standard and appropriate correction
dissolution cavities. factors were applied (Craig, 1957). The standard
deviation ranges for carbon and oxygen from 0.01
to 0.04‰. A correction factor for δ18 O values of
3. Methods 0.7‰ (Grossman and Ku, 1986) was added to the
aragonite samples and a correction factor of 0.8‰
Thin sections (15 ð 10 cm) and polished thin sec- (Sharma and Clayton, 1965) was added to the δ18 O
tions (48 ð 28 mm) were studied petrographically. ratios of dolomitic samples. 3.7 g of aragonite were
J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222 209

mechanically prepared and subjected to biomarker in diameter, are common. Occasionally remains of a
analysis. After saponification of the ground sam- dark-gray, homogenous micrite are preserved within
ple in 6% KOH in methanol (60ºC, 2 h), the su- the neomorphic fabric (Alter Stolberg) or the primary
pernatant was decanted and the sample was ultra- fabric of a former oolitic limestone is still obvious
sonically extracted with dichloromethane=methanol (Mühlberg). Acicular gypsum lines the ooids. Lo-
(3 : 1; v=v). The combined supernatants were acid- cally granular gypsum may be volumetrically even
ified to pH2 and extracted with dichloromethane. more important than carbonate. Its crystal sizes range
The resulting organic phase was fractionated by sil- from 10 to 150 µm. Less common than gypsum is
ica gel column chromatography into hydrocarbons, anhydrite, the crystal size of which may reach 1.2
alcohols (not discussed here) and an acidic fraction mm. Gypsification of some of the anhydrite crys-
(elution with dichloromethane=methanol; 3 : 1, v=v). tals is obvious with transformation directed from the
Methyl esters of the organic acids were prepared by crystal surface to the center. Veins crosscutting the
treatment with 1 ml methanol=trimethylchlorosilane rock consist dominantly of anhydrite and to a lesser
(8 : 1, v=v; 60ºC, 2 h). After filtration over silica extent of gypsum. Framboidal pyrite is locally abun-
gel, the hydrocarbon and methyl ester fractions were dant. The only fossils found in the thin sections are
subjected to gas chromatography (GC) and com- foraminifera of the genus Nodosaria (Mühlberg).
bined gas chromatography–mass spectrometry (GC–
MS). GC analyses were run on a Carlo Erba Frac- 4.2. Aragonite and native sulfur
tovap 4160 gas chromatograph, using ‘on-column’
injection and a flame ionization detector. The GC Aragonite inclusions occur in voids of the host
was equipped with a 30-m DB5 column (0.3 mm rocks, which were formerly filled with gypsum.
i.d., 0.25 µm film thickness; carrier gas H2 ). The These inclusions of white aragonite may reach 3
GC–MS system was a Finnigan Mat CH7A mass cm in diameter (Fig. 4a). Joint surfaces may also be
spectrometer interfaced to a Carlo Erba 4160 GC covered by aragonite over areas of about 10 cm2 .
(60 m XLB, 0.25 mm i.d., 0.32 µm film thick- The aragonite is not indurated and is always closely
ness, carrier gas He, ‘on-column’ injection). The associated with gypsum. Internally the aragonite in-
identification of the compounds was based on a com- clusions are formed of platy crystals (Fig. 4b). Plates
parison of their mass spectra and of GC retention may exhibit the same general orientation in one in-
times with those of published data or with reference clusion (Fig. 4c) or may be arranged in bundles with
compounds. Quantification was carried out by GC- the orientation of the plates changing from one bun-
peak area integration (Bruker Chromstar software) dle to the other (Fig. 4d). Perfectly preserved arag-
and comparison with an internal standard of known onite crystals also occur on heavily weathered joint
concentration. surfaces (Fig. 4e). Only one example has been found
of fibrous aragonite crystals (Fig. 4f). Some arag-
onite inclusions enclose rhomb-shaped crystals of
4. Carbonate petrography calcite replacing former dolomite (Fig. 4g). Within
some veins there is a sequence from acicular gypsum
4.1. The host rocks (Ca2 and Ca3) to granular gypsum to aragonite towards the center
of the vein. Aragonite crystals are oriented orthogo-
The host rocks consist of a crystal mosaic of nally or at an obtuse angle to solution fronts on the
carbonate, gypsum and anhydrite. The carbonate is gypsum crystals (Fig. 4h). Replacement of gypsum
calcite at the localities Walkenried and Alter Stolberg by aragonite is obvious from these solution fronts
and dolomite at the Mühlberg locality. Neomorphic along gypsum crystals (Fig. 5a,b). Acicular gypsum
fabrics prevail. Carbonate crystals mostly exhibit appears to be less affected by replacement than the
irregular crystal boundaries typical for a neomor- granular gypsum.
phic spar. Their crystal size distribution is patchy Two types of micro-rods are associated with the
with a mean of about 20 µm. At Mühlberg rhomb- aragonite plates (Fig. 5c). The first type of micro-rod
shaped dolomite crystals, which are about 150 µm is about 0.1 µm in diameter and 1 µm in length. Rods
210 J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222

Fig. 3. Gas chromatograms of the total hydrocarbons (a) and the fatty acids (b) extracted from neoformed aragonite (Alter Stolberg).

of this type are frequent. Often these rods were found surfaces or even appear to be slightly embedded in
to be arranged in nest-like structures (Fig. 5d). They depressions on the crystal surfaces (Fig. 5e).
are cylindrical in cross section, have rounded termi- Both at the margins of the aragonite inclusions
nations, and may be straight or curved along their and between the bundles of aragonite, dark-brown to
length. The second type of micro-rod is less common. black organic-rich aggregations occur. These very
Rods with larger dimensions of about 0.8 µm in di- characteristic residues are restricted to the arag-
ameter and 4 µm in length are attached to the crystal onite. Within the host rocks nothing similar was
J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222 211

found. The organic-rich aggregations have an irreg- Table 1


ular shape and may reach 1 mm in diameter. Half Mineralogy and chemical composition of host rocks (Müh-B,
Sto-C) and aragonite inclusions
of the volume of some aragonite inclusion may be
composed of these organic residues. Their fabric is Sample Mineralogy Ca2C Mg2C Sr2C Fe2C Mn2C
peloidal, and at their margins it becomes obvious (%) (%) (ppm) (ppm) (ppm)
that they are formed of accumulations of globules Müh-A aragonite 38.7 0.374 2800 20 20
(Fig. 5f). The diameters of globules show a contin- Müh-B dolomite 22.5 13.3 90 310 250
uous spectrum from 3 µm to smaller sizes. Epiflu- Sto-A aragonite 37.6 0.190 820 2820 730
orescence-microscopy applied on these thin sections Sto-B aragonite 36.7 0.051 1620 140 85
Sto-C calcite 34.9 0.093 80 980 920
is a useful tool to prove the organic composition of
these aggregations within the aragonite. Irradiation
with ultraviolet light causes an intense fluorescence the occurrence of Fe–Mn-oxy-hydroxides within the
of the organic residues (Fig. 5g,h and Fig. 6a,b). aragonite inclusion analyzed. XRD studies indicate
Another feature of the Ca3 from the locality Al- that the black phases associated with aragonite are
ter Stolberg is the local occurrence of native sulfur X-ray amorphous. The Fe–Mn minerals were found
within micro-cavities. The latter is found associated in association with only one aragonite inclusion,
with aragonite, but more commonly it occurs in cav- whereas the overwhelming majority of the aragonite
ities without any aragonite phases (Fig. 6c). Where inclusions contained no additional mineral phase,
aragonite and sulfur are associated, the formation except for rhomb-shaped calcites. The high Mg con-
of sulfur postdates the former. Globular aggregates tent (0.051–0.374 wt.%) of the aragonite samples is
consisting of microcrystalline sulfur reach 800 µm probably related to these dedolomite rhombs.
in diameter. The surfaces of sulfur are densely cov-
ered with mineralized curved rods (Fig. 6d). These
5.2. Stable isotopes
rods are about 7 µm in length and 3 µm in width.
Their size and shape are extremely constant. Many of Carbon and oxygen isotopes of Zechstein carbon-
them exhibit small depressions on their outer surface ates and the aragonite inclusions are given in Table 2.
(Fig. 6d). With ongoing precipitation of sulfur, the The δ13 C differ significantly from host rock to arago-
rods become enveloped (Fig. 6e). Associated with nite at the localities Mühlberg and Alter Stolberg. The
them are coccoid-shaped bodies. The latter have a host rock is slightly enriched in 13 C at the Mühlberg
diameter of about 0.4 µm (Fig. 6d). (C0.96 to C0.97‰) and depleted at Alter Stolberg
At the locality Walkenried some aragonite inclu- ( 5.28 to 5.63‰). At both localities δ13 C values of
sions exhibit a small central cavity caused by the aragonite ( 9.67 to 10.20‰) are lower than those
solution of aragonite. These cavities are lined with of the surrounding rock. The aragonite from Walken-
microcrystalline gypsum growing on the aragonite ried yielded similar δ13 C values, ranging from 9.24
and partially replacing the carbonate. to 9.64‰. In contrast to the other localities, the host
rock here does not differ significantly from the arag-
onite values ( 9.45 to 9.99‰).
5. Geochemistry Oxygen isotope measurements from aragonite in-
clusions yield rather uniform values, ranging from
5.1. Mineralogy and chemical composition 6.17 to 7.21‰. The host rocks exhibit a broader
range, with values for Mühlberg of 3.66 to
Chemical analyses of the host rocks and the arag- 4.84‰, for Walkenried of 6.64 to 6.66‰, and
onite inclusions are shown in Table 1. Measured for Alter Stolberg of 6.60 to 6.63‰.
Sr concentrations in the samples of the host rock
are smaller than 100 ppm, whereas the aragonite 5.3. Organic geochemistry
inclusions exhibit elevated Sr concentrations rang-
ing from 820 to 2800 ppm. The high concentrations A gas chromatogram of the total hydrocarbon
of Fe and Mn in the sample Sto-A are related to fraction is shown in Fig. 3a. The aragonite with or-
212 J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222
J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222 213

Table 2 Table 3
Stable carbon (δ13 C) and corrected oxygen (δ18 O) isotope analy- Concentrations of selected molecular markers present in the
ses of Zechstein carbonates and aragonite inclusions hydrocarbon and fatty acid fractions of the neoformed aragonite
(Alter Stolberg) cements
Sample Carbonate phase δ13 C δ18 O
(‰ PDB) (‰ PDB) Compound (ng=g cement)
Wal-1 calcitic matrix 9.45 6.64 Hydrocarbons
Wal-2 calcitic matrix 9.99 6.66 n-C21 92
Wal-3 aragonite inclusion 9.24 7.21 n-C28 70
Wal-4 aragonite inclusion 9.64 7.02
Fatty acids
Müh-1 dolomitic matrix C0.96 3.66
16 : 1ω7c 750
Müh-2 dolomitic matrix C0.97 3.68
16 : 1ω7t 430
Müh-3 dolomitic matrix C0.97 4.84
16 : 1ω5c 16780
Müh-4 aragonite inclusion 9.67 6.69
16 7880
Müh-5 aragonite inclusion 9.97 6.17
18 : 2ω9 1240
Müh-6 aragonite inclusion 9.98 6.54
18 : 1ω9c 3340
Sto-1 calcitic matrix 5.28 6.63
18 : 1ω7c 1840
Sto-2 calcitic matrix 5.63 6.60
18 2250
Sto-3 aragonite inclusion 10.08 6.56
Sto-4 aragonite inclusion 10.16 6.75 Fatty acids: c, t refer to cis- and trans-configuration of the
Sto-5 aragonite inclusion 10.20 6.26 (terminal) double bond, respectively.

ganic-rich aggregations shows a simple compound The fatty acid pattern of the aragonite is shown
pattern comprising a modal n-alkane distribution in Fig. 3b. Fatty acids act as building blocks of
with a first concentration maximum at n-heneicosane the cell membranes in most living organisms. In the
(n-C21 , 92 ng=g dry sample). Such pattern may de- sample studied, the compounds are present in re-
rive from a petroleum source and=or microbial re- markably high concentrations which exceed those of
working of organic matter rather than from a specific individual hydrocarbons by more than two orders of
input. A conspicuous feature of the hydrocarbon magnitude. The fraction contains mainly even-chain
fraction is the presence of a second, more distinc- saturated and monoenoic n-acids with chain lengths
tive concentration maximum at n-octacosane (n-C28 , from 14 to 18 carbon atoms (C16 predominant, see
70 ng=g) and the occurrence of an unusual suite of Table 3). The pattern found yields some valuable im-
terminally (2- and 3-methyl- D iso- and anteiso-) plications on the nature and the source of the organic
branched alkanes in the range of C21 to C25 . Al- inclusions present in the neoformed aragonite: (1)
though no information on biomarker significance, The prominent concentrations and the high relative
age and=or the biological function of these com- amounts of comparably unstable, unsaturated fatty
pounds is available, they are likely to reflect a pri- acids are clearly indicative of fresh, newly produced
mary contribution of lipids from discrete microbial organic matter. (2) The simple fatty acid pattern
sources. points to a single organism, or a simple consortium

Fig. 4. (a) Polished slab of the Ca3 from the locality Alter Stolberg with several bright inclusions of aragonite embedded in the dark
matrix of the host rock. Scale bar D 2 cm. (b) SEM image of aragonite plates. The arrow points to a nest-like aggregation of M
micro-rods. Ca3, Alter Stolberg. Scale bar D 20 µm. (c) Sharp transition between the granular, calcitic host rock and an aragonite
inclusion (stained with Feigl’s solution). Ca3, Alter Stolberg. Scale bar D 200 µm. (d) Arrangement of bundles of plates in groups with
the orientation of the plates changing from one bundle to the other. Ca2, Walkenried. Scale bar D 200 µm. (e) Aragonite on a weathered
joint surface. Ca3, Alter Stolberg. Scale bar D 1 cm. (f) Aragonite inclusion made of fibrous crystals. Ca3, Alter Stolberg. Scale bar D
1 mm. (g) Rhomb-shaped crystals of calcite replacing former dolomite within an aragonite inclusion. The bright object on the left is an
organic inclusion. Thin section excited with ultraviolet light. Ca3, Alter Stolberg. Scale bar D 200 µm. (h) Gypsum crystals (left) and
platy aragonite. Center: aragonite crystals are oriented at an obtuse angle to the solution front along the gypsum crystal below the center.
Ca2, Mühlberg. Scale bar D 100 µm.
214 J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222
J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222 215

of organisms as the key biota associated with the for- 6.2. Diagenetic aragonite
mation of the aragonite cements. (3) The molecular
characteristics of the acids found strongly suggest The delicate aragonite crystals are not affected by
a bacterial source input, since all of them have weathering. This is surprising, as they are directly
been observed as bacterial lipid constituents, or from exposed to the changing conditions at the surface in-
recent sediments showing a pronounced microbial cluding episodic soaking by rainfall. Even aragonite
activity (e.g., Volkman et al., 1980; Nichols et al., crystals originating on weathered joint surfaces were
1986 and refs. cited therein). Notably, the 18 : 1ω7 found. This indicates that the aragonite formation
fatty acid was previously reported by Russell et al. postdates at least part of the weathering. All inclu-
(1997) from diagenetic carbonates replacing gypsum sions are not indurated and the crystal aggregates
and was interpreted as a marker of bacterial activ- readily disintegrate. Taking the metastability of arag-
ity. onite under surface conditions into account, the Re-
cent formation of this mineral phase is likely. Arag-
onite deposits, that were formed in pre-Holocene
6. Discussion times and still preserve their primary mineralogy, are
not uncommon. However, to the best of our knowl-
6.1. Diagenesis of the host rocks edge, all of these aragonite deposits were protected
from alterations by the surrounding rock or mineral
A general scheme of successive diagenetic pro- phases.
cesses of Zechstein carbonates and anhydrites was Comparing the development at the three localities,
proposed by Clark (1980) and Huttel and Mausfeld the process of aragonite formation is least advanced
(1991). Their model is also valid for the carbonates in the Ca2 from the Mühlberg locality. Here the
of the Eichsfeld High. They assume an early perva- aragonite is growing in cavities and veins which
sive dolomitization of carbonates in response to the are still partly filled with gypsum. Aragonite crys-
reflux of brines from sabkhas and playas. Due to this tals are found to protrude into both granular and
process, microcrystalline dolomites were formed and fibrous gypsum crystals, replacing the sulfate min-
later recrystallized. During burial diagenesis anhy- erals. The granular gypsum crystals are significantly
dritization of gypsum formations, pressure solution, more affected by this process. The interface between
leaching and calcitization of dolomite due to the gen- the gypsum crystals and aragonite is very irregu-
eration of CO2 from microbial oxidation of organic lar, indicating the dissolution of gypsum. The plates
matter occurred. The latter process took place prefer- of aragonite are probably directly related to the re-
entially at basinal sites, where the available amount placement of the gypsum. This is indicated by an
of organic matter was higher than on top of the plat- almost constant angle of the aragonite plates to the
forms, resulting in present-day calcitic lithologies in dissolution fronts along the gypsum crystals and the
the basinal settings and in dolomitic lithologies on circumstance that aragonite is always in direct con-
the platforms. In addition, uplifting, erosion, and ac- tact with these fronts. If the aragonite formation did
cess of water enriched in Ca-ions due to the leaching not occur immediately after dissolution of gypsum,
of anhydrite led to calcification of former dolomites a more indiscriminate infill of the cavities should be
under near-surface, meteoric conditions. expected.

Fig. 5. (a) Aragonite (dark) growing in a micro-cavity surrounded by acicular gypsum. Ca2, Mühlberg. Scale bar D 250 µm. (b) Detail
from Fig. 4a. Solution front on a gypsum crystal with aragonite crystals orientated orthogonally to this surface. (c) SEM image of two
types of micro-rods attached to aragonite plates. Ca3, Alter Stolberg. Scale bar D 6 µm. (d) Detail from Fig. 4c. M micro-rods arranged
in a nest-like cluster. Scale bar D 5 µm. (e) FE–SEM image of a micro-rod. Ca3, Alter Stolberg. Scale bar D 4 µm. (f) Organic-rich
aggregations (bright) within an aragonite inclusion. Note the flaky fabric of the organic aggregate in the center. Excited with ultraviolet
light. Ca3, Alter Stolberg. Scale bar D 100 µm. (g) Aragonite inclusion containing several organic-rich aggregations (dark). The long
axes of organic-rich aggregations are parallel to the orientation of aragonite plates. Ca3, Alter Stolberg. Scale bar D 200 µm. (h) Same
view as Fig. 4c now excited with ultraviolet light, causing the organic-rich inclusions to emit an intense fluorescence.
216 J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222

Fig. 6. (a) Organic-rich aragonite replacing gypsum crystals (right). Ca3, Alter Stolberg. Scale bar D 100 µm. (b) Same view as Fig. 5a
now excited with ultraviolet light. Organic compounds cause an intense fluorescence. (c) Globular aggregation of native sulfur within a
micro-cavity. Ca3, Alter Stolberg. Scale bar D 500 µm. (d) SEM image of native sulfur with curved rods (arrows) and coccoid-shaped
bodies. Ca3, Alter Stolberg. Scale bar D 10 µm. (e) SEM image of native sulfur. Curved rods (arrow) become enveloped by extracellular
precipitation of sulfur. Ca3, Alter Stolberg. Scale bar D 10 µm.

These processes are most advanced in Walkenried, gypsum under aerobic conditions was already de-
where the return to oxidizing conditions caused some scribed by Anadón et al. (1992) from a similar setting.
aragonite to be replaced by secondary gypsum. At
the contact surface between aragonite and gypsum, 6.3. Aragonite vs. calcite precipitation
which is very irregular, microcrystalline gypsum pro-
trudes into the laminated aragonite fabric. The process Several factors such as the presence of bacteria
of secondary replacement of aragonite by diagenetic and organic matter, the magnesium concentration of
J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222 217

the solution, high temperature and the degree of 6.4. Implications on the elemental composition
carbonate supersaturation have been suggested to fa-
vor aragonite precipitation instead of calcite. The The contents of Sr in subsurface Zechstein car-
relationship between microbial activity and the for- bonates vary from less than 100 ppm to some hun-
mation of aragonite or calcite still remains unclear. dred ppm, with extremely rare values above 1000
Buczynski and Chafetz (1991) found that media with ppm (Clark, 1980; Huttel and Mausfeld, 1991). Car-
the same bacterial composition yield aragonite or bonates from outcrops exhibit concentrations up to
calcite precipitates dependent on the viscosity of the 110 ppm. Limestones have higher Sr contents than
media. Oppenheimer (1961) noted the formation of dolomites, whereas Fe and Mn are enriched in micro-
aragonite in the presence of bacteria, whereas several crystalline dolomites indicating reducing conditions
others report on microbially-derived calcites (Boquet and saline solutions favoring the transport of Fe and
et al., 1973; Monger et al., 1991; Newman et al., Mn as metal complexes. The values in subsurface
1997). Bacteria may not be able to influence the samples are between 200 and 1000 ppm for Mn and
mineralogy of the precipitate, but calcifying organic 300–2000 ppm for Fe, for both dolomite and calcite.
substances derived from the decay of bacteria might Ranging from 820 to 2800 ppm, the neoformed
trigger matrix-mediated precipitation as described aragonites exhibit lower Sr concentrations than ma-
for microbialites from Lizard Island (Reitner, 1993). rine aragonites, which exhibit values of about 10,000
Rising Mg=Ca ratios have been demonstrated to ppm (Veizer, 1983). The host rocks analyzed in this
promote the precipitation of aragonite instead of cal- study yield much lower Sr concentrations, ranging
cite (Riccioni et al., 1996; Laya et al., 1992). Kitano from 80 to 90 ppm. This indicates that the neoformed
et al. (1962) found that the presence of MgCl2 in aragonites have sources of cations other than the cal-
Ca(HCO3 )2 solutions favors the formation of arago- citic or dolomitic matrices. Botz and Müller (1981)
nite. This is supported by Berner (1975), who stud- report Sr concentrations in the range of 1300–1700
ied the crystal growth of aragonite and calcite in ppm of the gypsum-rich transition horizons below
sea water, magnesium-depleted sea water, and mag- and above the Zechstein carbonates. Local enrich-
nesium-free sea water. He reported that dissolved ment of Sr is obvious from celestite crystals which
magnesium at sea water levels reduces the crystal occur within gypsificated anhydrite deposits (Lang-
growth of calcite. The process which supplies excess bein, 1968). Jung and Knitzschke (1961) report that
magnesium in the Zechstein carbonates is suggested the A2 contains up to 5300 ppm Sr. The distribution
to be dolomite replacement. This is corroborated by of Sr in carbonates and sulfates elucidates the crucial
the presence of calcitized dolomite crystals within part of sulfate dissolution as the process supplying
the aragonite inclusions. cations for the precipitation of aragonite.
High temperature has been demonstrated to pro-
mote precipitation of aragonite relative to calcite 6.5. Implications on the stable isotope compositions
(Kitano et al., 1962), but is very unlikely to be
responsible for the aragonite formation in the near- The aragonite that replaces gypsum is character-
surface setting as discussed here. ized by distinctly lower δ13 C values than the host
The degree of carbonate supersaturation predeter- rocks, except for the Ca2 from Walkenried. The nar-
mines the mineralogy of the precipitates, with very row range of the δ13 C values of aragonite suggests
high supersaturation levels promoting aragonite for- that precipitation at the different locations was trig-
mation (Chafetz et al., 1991). In the case of our gered by the same process. The values reported here
example high degrees of supersaturation in Ca2C of about 10‰ indicate two different carbon sources.
(due to the solution of gypsum), and an elevated δ13 C values of about 25‰ are typically associated
PCO2 (due to microbial activity), cannot be proven, with bacterial sulfate reduction and depend on the
but may have occurred. composition of the organic matter that becomes ox-
idized (Irwin et al., 1977). Accordingly, the isotopic
composition of the aragonites studied implies a mix-
ing with a less depleted carbon source, probably the
218 J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222

carbonate host rocks. The sulfate sources for the bac- as the alteration of the host rock in earlier times. To
terial sulfate reduction are the minerals gypsum and a lesser extent, this also holds true for the locality
anhydrite. The organic matter that became oxidized Alter Stolberg (δ13 C 5 to 6‰).
was probably derived from the Ca2 and Ca3 and not For subsurface samples Huttel and Mausfeld
from deeper strata. Indeed, the basinal facies of the (1991) report δ18 O values in the range of C4 to
Ca2 contains up to 1.75% organic carbon (Botz and 4‰ in Zechstein carbonates. The δ18 O values of
Müller, 1981) and has thus been discussed for its oil the dolomite host rock from Mühlberg have to be
and gas potential (Botz et al., 1981). lowered by 3–7‰, because of the differential oxy-
The negative δ18 O values of aragonite of about 6 gen isotope fractionation during crystallization of
to 7‰ indicate that precipitation occurred under calcite with respect to dolomite (O’Neil and Epstein,
the influence of meteoric waters. Today, all outcrops 1966; Fritz and Smith, 1970; Tan and Hudson, 1971;
are above the ground water table, implying that Land, 1980). The low temperature precipitation of
aragonite formation occurs in the vadose–meteoric protodolomite yields an enrichment in 18 O by 3–
zone. 4‰ relative to coexisting calcite (Fritz and Smith,
Data from Botz and Müller (1981) regarding the 1970), which corresponds well with the data of Irwin
δ13 C values of the Zechstein carbonates show a range et al. (1977). Taking this into account, all the host
from C7 to C4‰. Only those samples which contain rocks described here exhibit δ18 O values of about 6
considerable amounts of sulfate yielded values that to 7‰, indicating an exchange with isotopically
range from C2 to 0‰. These positive δ13 C values light meteoric waters during diagenesis (cf. Tan and
of Zechstein carbonates are interpreted by Huttel Hudson, 1971).
and Mausfeld (1991) to be derived from the relative
enrichment of 13 C in the seawater. This is due to the 6.6. Bacterial mediation
preferential fixation of 12 C in the anoxic sediments
as organic carbon (Magaritz et al., 1983). The bacterial mediation in the diagenetic pro-
In comparison with the data from Botz and Müller cesses taking place within Zechstein carbonates is
(1981) and Huttel and Mausfeld (1991), the deple- evidenced by the co-occurrence of characteristic
tion of 13 C in the host rocks of this study indicates phenomena. These are carbonate replacement of
a higher carbon content that was derived by the oxi- gypsum, low δ13 C values of the replacing carbon-
dation of organic matter. Only the dolomitic Ca2 of ates, and the presence of native sulfur. The crucial
the Mühlberg is slightly enriched in 13 C (¾C1‰), role of bacteria is further corroborated by bacterial
whereas the matrices at the other localities are de- body- and chemo-fossils associated with the diage-
pleted in this isotope. Studies on the isotopic com- netic phases.
position of co-existing dolomites and calcites have The smaller micro-rods attached to the aragonite
revealed that dolomites are slightly enriched in 13 C plates are organized in nest-like accumulations, lack
with respect to associated calcites (Fritz and Smith, any crystallographic form or indication of cleavage,
1970; Tan and Hudson, 1971). However, this en- and their form exhibits similarities to bacteria. This
richment is not sufficient to explain the offset in indicates a biotic origin. They correspond to the M
the δ13 C values between the Mühlberg-Ca2 and the micro-rods described by Verrecchia and Verrecchia
other calcitic host rocks. The 13 C isotopic compo- (1994). These M micro-rods are thought to be calci-
sition of the Mühlberg-Ca2 indicates precipitation fied bacteria or physicochemical nuclei. Phillips and
from marine sources. At Walkenried the calcitic host Self (1987) interpret them as calcified rod-shaped
rock exhibits a similar depletion in 13 C of about bacteria and notice their frequent association with
10‰ like the aragonite inclusions. This low value organic matter. They also have been attributed to
indicates that some carbonate carbon was derived bacteria by their form and their types of organiza-
from the oxidation of organic matter. Probably the tion (Chafetz et al., 1998). Micro-rods of the second
host rock at Walkenried has also been affected by type (about 4 µm in length) found on the aragonite
bacterial sulfate reduction. This implies that similar plates exhibit the typical size and form of rod-shaped
processes account for formation of aragonite as well bacteria and are probably also calcified bacteria.
J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222 219

Biomarker studies on aragonite including organic- in the completely dark cavities within Zechstein car-
rich aggregations yielded high concentrations of spe- bonates.
cific unsaturated fatty acids, which are clearly indica- The following processes of gypsum solution
tive of newly produced organic matter and reflect the (Eq. 1), reduction of sulfate ions (Eq. 2), aragonite
presence of a discrete microbial community being precipitation (Eq. 3), and sulfur formation (Eq. 4) are
associated with aragonite formation. envisaged:
Bacterial sulfate reduction leads to the produc-
CaSO4 ð 2H2 O ! Ca2C C SO24 C 2H2 O (1)
tion of H2 S, which might be converted to native
sulfur under aerobic conditions or by the reaction The gypsum involved here comes from the nod-
with Fe–Mn–oxy-hydroxides even under anaerobic ules embedded in the carbonate host rocks. The
conditions (Jørgensen, 1987). However, as iron and widespread dissolution of the sulfate deposits of the
manganese primarily occur in reduced state in Zech- A1, A2 and A3 may generate additional sources of
stein carbonates, an exposure to oxygen is required Ca2C and SO4 ions.
anyway. A shift from anaerobic conditions during
SO24 C 2CH2 O ! 2HCO3 C H2 S (2)
aragonite formation to an aerobic micro-environ-
ment during sulfur formation within some cavities Due to the utilization of organic material by
is most likely related to an exposure to oxygen due sulfate-reducing bacteria, alkalinity increases (see
to progressive weathering of the sulfate-rich carbon- Eq. 2). Together with the availability of Ca2C ions
ate rocks. As sulfate-reducing bacteria are obligate (see Eq. 1), precipitation of aragonite will be induced
anaerobes, the oxidation of H2 S probably did not (Eq. 3):
occur at the same time as the sulfate reduction and
Ca2C C 2HCO3 ! CaCO3.ara/ C H2 O C CO2 (3)
aragonite precipitation at the locality Alter Stol-
berg. Formation of native sulfur might have taken If the product of sulfate reduction, H2 S, gets
place at a later stage, when H2 S, trapped in cav- trapped in the aerobic zone for a sufficient length of
ities, came into contact with oxidizing waters. A time, it can be oxidized to sulfur and sulfur-oxides
contemporaneous formation of aragonite and sulfur (Eq. 4):
due to the upward seepage of H2 S into an aero-
3H2 S C 4O2 ! S0 C 3H2 O C SO2 C SO3 (4)
bic environment cannot be excluded, but is con-
sidered to be unlikely as cavities represent rather The latter process can accumulate sulfur to de-
isolated traps. The process of sulfur formation is posits of commercial value, such as in the Permian
also bacterially mediated. Several groups of bac- anhydrite formations of West Texas (cf. Davis and
teria are able to use H2 S as an electron donor. Kirkland, 1979), as well as in the Tertiary of the
We interpret the curved rods which are associated Mediterranean area (Dessau et al., 1962), and in the
with the native sulfur as fossilized bacterial bodies. Middle Miocene of the Gulf of Suez (Pierre and
The small depressions on their outer surface indi- Rouchy, 1988).
cate that shrinkage of the bacterial bodies occurred
at a low extent before they were completely min-
eralized. The permineralization of bacterial bodies 7. Conclusions
is followed by an extracellular mode of precipita-
tion enveloping the rods. The coccoid-shaped bodies Bacterial mediation is a widespread phenomenon
in the sulfur deposits may also represent fossilized in the formation of diagenetic minerals in different
bacteria. With a diameter of 0.4 µm, these bodies sedimentary environments. Neoformed aragonite and
exceed the size of nannobacteria described by Folk native sulfur in the Zechstein carbonates from Cen-
(1993). Apart from chemolithotrophic sulfur-oxidiz- tral Germany described here, highlight the influence
ing bacteria, purple sulfur bacteria are also able to of microbial activity on diagenesis. The precipitation
oxidize H2 S to elemental sulfur. However, as the of diagenetic aragonite and sulfur within cavities of
anoxigenic purple bacteria are phototrophic, it is the carbonates was mediated by bacteria. All occur-
highly unlikely that they formed the sulfur deposits rences of the neoformed, metastable aragonite and of
220 J. Peckmann et al. / Sedimentary Geology 126 (1999) 205–222

sulfur are located far above the watertable, indicat- tous loose and platy appearance of the aragonite
ing that aragonite formation occurred in the vadose– inclusions are believed to be caused by the replace-
meteoric zone. ment of gypsum by aragonite. The crucial factor for
The processes which led to the formation of arag- the precipitation of aragonite instead of calcite was
onite started with the dissolution of sulfate nodules probably an elevated Mg=Ca ratio.
embedded in the carbonate host rocks. Solution of
gypsum provided both Ca ions for the precipitation
of aragonite and sulfate ions for the metabolic pro- Acknowledgements
cesses of sulfate-reducing bacteria. The substrate for
these bacteria was organic matter, probably derived We are indebted to M. Plache, A. Quast and K.
from the carbonate host rocks. The oxidation of or- Träger, who discovered the rocks which are the
ganic matter was coupled with sulfate reduction in subject of this study. We thank H. Becker and
an anaerobic micro-environment. Aragonite forms as K.-H. Faber for the preparation of thin sections.
a consequence of the increase in alkalinity accompa- M. Joachimski is acknowledged for stable isotope
nied with bacterial sulfate reduction. The importance analyses and H. Huckriede and C. Gross for their
of this process is corroborated by the low δ13 C val- comments. Special thanks to I. Harding for a care-
ues of the aragonite, which indicate that some of its ful review of an earlier version of the manuscript
carbon is derived from organic matter. The bacterial and to H. Lehnert and K. Techmer for their electron
oxidation of H2 S (product of sulfate reduction) re- microscope support. We acknowledge the logisti-
sulted in the formation of native sulfur, which occurs cal support provided by the IMGP, Göttingen (AG
as globular aggregates at one of the study localities. Reitner) and the IfBM, Hamburg (AG Michaelis).
Aragonite crystals exhibit a platy habit. SEM Comments by J.M. Rouchy and an anonymous re-
analyses show that two types of micro-rods are asso- viewer greatly improved the manuscript. This paper
ciated with the plates. The smaller type (1 µm long is a contribution to the SFB 468 ‘Wechselwirkungen
and 0.1 µm in diameter) corresponds to the M micro- an geologischen Grenzflächen’ (publ. no. 8) at the
rods described by Verrecchia and Verrecchia (1994). University of Göttingen.
This type and a larger type of mineralized rods (4
µm long and 0.8 µm in diameter) are interpreted
to be bacterial fossils. The volumetrically important
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