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CHM 171 Theme 3 Bonding and Molecular Geometry
CHM 171 Theme 3 Bonding and Molecular Geometry
Geometry
CHM 171
SYLLABUS THEME 3
Prescribed Text Book:
Kotz, Treichel and Townsend 9th Ed.
NOTE: Do not use the text book method when doing the Lewis
Chapter 8 structures:
Listen attentively in class and watch the video on click-up
A chemical bond is a lasting attraction between atoms that enables the formation
of chemical compounds.
The bond may result from
1. the electrostatic force of attraction between atoms with
opposite charges – ionic bond
2. or through the sharing of electrons - covalent bonds
Ionic bond Covalent bond
Why do atoms bond and how do they bond?
Aim: Lower energy
4
Ionic vs covalent bonding
Electronegativity, ∆E
A measure of the ability of an atom in a molecule to attract the shared electrons in a
covalent bond.
Lewis symbols of atoms
A representation of electrons
in the valence shell, i.e. valence
electrons
Ionic bonding – Lewis structures
When sodium loses an electron
to form Na+, its effective size
decreases to about half.
H
x
H Hx H H H H2
Lewis dot Lewis dot Structural Chemical
symbol structured formula formula
Replace bonded
electrons with a
line
H N H H–N–H
–
H
Bond Pair
H
11
Coordinate/ Dative Covalent Bonds
H ••F
14
Electronegativity (EN)
A measure of the electron-attracting power of a bonded
atom
Difference in EN (EN)
- indicates the degree of bond polarity 15
Electronegativity (EN)
EN: ↑ across period (left to right) on Periodic Table
EN: ↓ down group (top to bottom) on Periodic Table
• Larger difference = more polar bond
• negative end toward more electronegative atom
Indicates direction
of polarity with
arrow head towards
+ - Negative end
16
Exercise:
• Arrange elements in the following sets in order of
increasing electronegativity:
a. As, Br, Se, I
b. B, C, Al, Si
c. Ge, As, P, Sn
d. Li, Rb, Be, Sr
17
Electronegativity & Bond type
EN 2 Ionic
18
Writing Lewis Structures
1. Count the total number of valence e-‘s(Ve) in the
structure, for ions: add anion charge; OR subtract
cation charge;
Solution:
Step 1. Count the total number of valence electrons:
F – group 17 .: 7 valence electrons
N – group 15 .: 5 valence electrons
Total Ve = (3 x F) + (1 x N)
= (3 x 7) + (1 x 5)
= 26 e-
Step 2. Identify the central atom:
ENN = 3.0, and ENF = 4.0
.: N is the central atom
20
Exercise cont…
Step 3. Draw a skeletal structure:
F N F
F
Step 4. Subtract 2 electrons for each bond formed
from the total Ve:
Remaining electrons = 26 – (3 bonds x 2 e-/bond)
= 26 – 6
= 20 e-
21
Exercise cont…
Step 5. Complete the octets for the terminal atoms,
by placing lone pairs on the atoms:
F N F
F
Step 6. Subtract the Lone pair electrons from the
Remaining electrons
Rem. e-’s = 20 – 3 x (3 Lone pairs x 2 e-/LP)
= 20 – 18
= 2 e-
22
Exercise cont…
Step 7. Place any remaining electrons on the
central atom, and check that the Octet rule
is satisfied for ALL atoms
Rem. e-’s = 2 e-
F N F
F
Total Ve =2xC+2xN
= (2 x 4) + (2 x 5)
= 18 e-
Step 2. Identify the central atom:
ENC = 2.5, and ENN = 3.0
.: C is the central atom 24
Example 10.6 cont…
Step 3. Draw a skeletal structure:
N–C–C–N
Step 4. Subtract 2 electrons for each bond formed
from the total Ve:
Remaining electrons = 18 – (3 bonds x 2 e-/bond)
= 18 – 6
= 12 e-
N C C N 25
25
Example 10.6 cont…
Step 6. Subtract the Lone pair electrons from the
Remaining electrons
Rem. e-’s = 12 – 2 x (3 Lone pairs x 2 e-/LP)
= 12 – 12
= 0 e-
N C C N N C C N
26
26
Exercise cont..
• Write acceptable Lewis structures for:
1. H2NOH
2. HOClO2
3. O2SCl2
4. H2CO
5. FNO
6. BrO3-
7. C2H2
27
Example 10.7
Question:
Write the Lewis structure for the nitronium ion, NO2+.
Solution:
Step 1. Count the total number of valence electrons:
N – group 15 .: 5 valence electrons
O – group 16 .: 6 valence electrons
Total Ve = 1 x N + 2 x O – 1e (charge)
= (1 x 5) + (2 x 6) – 1e
= 16 e-
Step 2. Identify the central atom:
ENN = 3.0, and ENO = 3.5
O–N–O
29
29
Example 10.7 cont…
Step 5. Complete the octets for the terminal atoms,
by placing lone pairs on the atoms:
O N O
Step 6. Subtract the Lone pair electrons from the
Remaining electrons
30
Example 10.7 cont…
Step 7. The central atom, N, has only the 4 Be, so
need another 4, .: move 2 LP’s to form
multiple bonds.
There are 2 possible ways:
O N O OR O N O
Which result in 2 plausible products:
O N O OR O N O
31
Formal Charge
Describes the electron distribution of the valence
electrons on each atom, and is calculated for EACH
atom in a molecule.
O N O
O1 O2
Calculate the formal charge on each atom in the ion:
FC = Ve – LPe – ½ Be
O1 : FC = 6 Ve – 2 LPe – ½ (6 Be) = +1
N: FC = 5 Ve – 0 LPe – ½ (8 Be) = +1
O2 : FC = 6 Ve – 6 LPe – ½ (2 Be) = –1
+1 +1 -1
O N O
Note: the sum of the FC’s = the charge on the ion 34
Exercise cont..
Question:
Calculate the formal charges on the atoms in NO2+
O N O
O1 O2
Calculate the formal charge on each atom in the ion:
FC = Ve – LPe – ½ Be
O1 : FC = 6 Ve – 4 LPe – ½ (4 Be) = 0
N: FC = 5 Ve – 0 LPe – ½ (8 Be) = +1
O2 : FC = 6 Ve – 4 LPe – ½ (4 Be) = 0
0 +1 0
Answer:
Structure B is more stable as there are smaller FC’s
in the structure:
B (0,1,0) compared to A (1,1,-1) 36
Deciding the most stable Lewis structure with formal charges
3 guidelines involving FC: FC= # of valence electrons of an tom – (# of
1. A molecular structure in which all FC bonds around the atom + # of lone electrons
are zero is preferred to one in which around the atom)
some FC are not zero. -1 -1 Add # bond
and # lone
-1 +1 -1 0 0 -1 together
or
2. If the Lewis structure must have and subtract
from the ve
nonzero FC, the arrangement with -1
the smallest nonzero FC is -1
preferred. Atoms ve- #Bonds #Lone e FC
P 5 4 0 +1
-O 6 1 6 -1
3. When we must choose among
several Lewis structures with similar Atoms ve- Bonds Lone e FC
distributions of FC, the structure with P 5 5 0 0
the negative FC on the more -O 6 1 6 -1
electronegative atoms is preferred. =O 6 2 4 0
Deciding the most stable Lewis structure with formal charges
O O O O O O
Resonance hybrids – two plausible Lewis structures can be drawn for O3.
These structures are equivalent,
BUT neither is correct!
Resonance structure – a “summary” structure showing that the
electrons of the double bond are delocalized.
O O O
39
Resonance
Question:
Draw the plausible Lewis structures for CO32- ion.
40
Question:
Write the Lewis structure for the acetate anion, CH3COO-.
41
Exceptions to the Octet Rule
2. Incomplete Octet
3. Expanded Octets
42
Odd – Electron Species
These are species that have an unpaired electron in their
structure.
Eg. Nitrogen oxide, NO, has 11 valence electrons:
N O
Unpaired e- unstable compounds .: very reactive.
Compounds will bond with itself, dimerise, to pair e’s
E.g. NO2 molecules will bond together
O O O O
N N N N
O O O O 43
Incomplete Octet
Compounds of Groups 1, 2 and 13 (3), which do not have many
valence electrons.
E.g. BF3 Boron is in group 13, and so only has 3 electrons available for
forming bonds.
F–B–F
–
F
Form coordinate covalent bond with a compound that has a lone pair of
electrons.
H F H F
–
–
H – N: B–F H–N–B–F
–
–
H F H F
NH3 donates its lone pair to form coordinate covalent bond
Expanded Octet The Lewis structures where the central atom
ends up with more than an octet,
Elements ≥ n = 3 can use their d orbitals for bonding
E.g. Phosphorus and sulfur:
P [Ne] 3s 2 3p 3 [Ne] 3s 1 3p 3 3d 1
.: 5 unpaired electron .: 5 bonds
S [Ne] 3s 2 3p 4 [Ne] 3s 1 3p 3 3d 2
.: 6 unpaired electron .: 6 bonds
F F F
F F
P S
F F F F
F F
PF5 SF6
Expanded Octet
Sulfur trioxide, SO3
Plausible Lewis structure:
Ve = 24 e-
-Be -6 -1 +2 -1
= 18 e- O S O 3 resonance structures
-LPe - 18
= 0
0O
O
0
Decide which is more stable on the basis of formal charges
46
Expanded Octet
Sulfur dioxide, SO2 2 resonance structures
Plausible Lewis structure: 0 +1 -1
Ve = 18 e-
-Be -4 OR
= 14 e-
-LPe - 12
-1 +1 0
= 2
49
Expanded Octet
Sulfuric acid, H2SO4
52
Drawing of molecules using the Lewis structure
NO2F PCl5 COCl2
PF2O+ SF6 ICl4-
Violation of the octet
Expansion occurs in
expanded octet
expanded octet expanded octet atoms in P3 and
above.
12 electrons should
be the maximum of
electrons allowed
around the central
atom
Relationship between bond order, bond length and bond energy
Bond order is the number of chemical bonds between a pair of atoms.
Bond length is the average distance between nuclei of two bonded atoms in a
molecule. Related to the atomic size. The smaller the atom, the shorter the bond.
Bond energy is the energy required to break apart a mole of molecules into its
component atoms.
Use the bond energy values to calculate the enthalpy (heat) for the following reaction.
+
-82 kJ/mol
Practice exercises
Write resonance forms that describe the distribution of electrons in each of these
molecules or ions.
(a) selenium dioxide, OSeO
(b) nitrate ion, NO3−
(c) nitric acid, HNO3
(d) benzene, C6H6:
Draw the structure of hydroxylamine, H3NO, and assign formal charges; look up the
structure. Is the actual structure consistent with the formal charges?
Practice exercises
Draw the Lewis structure of each of the molecules listed below.
CH3+, NH2−, CH3−, NH4+, BF4−
In each case, use the method of calculating formal charge described to satisfy
yourself that the structures you have drawn do in fact carry the charges shown.
Give the formal charges for all non-hydrogen atoms in the following molecules:
BH4−, H2O, CH3O−
BH4− (B = −1);H2O (O = 0); CH3O− (C = 0, O = −1)
Valence Shell Electron Pair Repulsion Theory
(VSEPR)
Valence shell e- pairs (electron domains) keep as far
apart as possible to minimise the electron-electron
repulsion.
Most important factor in determining geometry is the
relative repulsion between electron pairs
64
Possibilities for Electron Group Geometries
Electronic and molecular geometries are based on
these 5 basic shapes
Number of Electron
Pairs/ Electron Domain Geometry Bond Angles
Bonding Domains
2 Linear 180o
3 Trigonal planar 120o
4 Tetrahedral 109.5o
5 Trigonal bipyramidal 90o, 120o, 180o
6 Octahedral 90o, 180o
65
66
Drawing conventions 3D structures
Include the bond angle, the charge and the direction of the dipole moment (𝝁). 67
Terminology
Basic VSEPR Formula:
AXyEz
72
The effect of multiple bonds on bond angles
• Electron domains for double and triple bonds exert
greater repulsive force on adjacent electron domains
than single bonds, therefore, they also affect bond
angles.
73
Molecular Geometry (learn!)
74
Example
Question:
Predict the molecular geometry of the polyatomic anion, ICl4.
Cl
Cl I Cl
Cl
Expanded octet
O3 XeF2 BrF5
SF6, XeF4
The Lewis structures of SF6 and XeF4 have 6
pairs of electrons around the central atom, the
electron pair arrangement about the central
atom is octahedral.
The molecular geometry of SF6 is octahedral,
but due to the lone pairs on Xe, the molecular
geometry of XeF4 is square planar.
Both are non polar.
Practice examples
5. Draw one Lewis structure of ICℓ2O2–. Use different symbols for the valance electrons
of the different elements. Show all lone pairs. Do not use lines (dashes) for bonds.
6. Draw the Lewis dot structure of XeOF3-. Use different symbols for the valance
electrons of the central atom (e.g. dots) and terminal atoms (e.g. crosses). Show all
lone pairs. NB! Do not use lines (dashes) for bonds. Your drawing must clearly
show the positions of the electrons.
7. Draw three possible resonance structures for HNO3. Use structural formulas (use
lines for bonds) only. All valence electrons must be represented. Allocate formal
charges to all atoms. Which of your structures probably don’t exist? Motivate your
answer.
8. (a) Draw the perspective three-dimensional structural formula of CℓF5. Use lines,
wedges and broken lines (dashes) for bonds. Include: all valence electrons in your
structure, sizes of all bond angles, polarity of the molecule. (b) What is the
molecular geometry of this molecule?
2017 86
Practise exercises
4. Use the chlorine atom as central atom, other elements from the periodic
table, but not hydrogen and construct the following species in i, ii and iii:
i. A polar compound with octahedral molecular geometry. Show clearly the Lewis
dot structure, the 3D Lewis line structure, the direction of the dipole moment
in the Lewis line structure as well as bond angles.
ii. A cation with see-saw molecular geometry. Draw the Lewis line structure and
calculate the formal charge on chlorine.
iii. An anion with trigonal bipyramidal molecular geometry. Draw the Lewis line
structure and calculate the formal charge on chlorine.
2017 90
Practice examples
9. The three Cℓ-O bonds in the chlorate anion, CℓO3–, have identical bond lengths,
closer to (but not equal to) that of a double bond than a single bond. (a) Draw
resonance structures of this molecule to support a brief explanation (only the first
15 words will be marked) of this observation. (b) What is Cℓ-O bond order in this
ion? Show how you determine this.
10.(a) Draw the Lewis dot structure and Lewis line structure for TeBr42-. Show all
lone pairs and bond angles. (b) Draw the line structure in 3D if applicable, using
lines, wedges and broken lines for bonds. (c) What is the name of the electron pair
geometry for TeBr42-? (d) What is the name of the molecular geometry for TeBr42-?
11.Determine whether POH3 is polar or not. Support your arguments with a three-
dimensional Lewis structure.
12.Use sulfur as the central atom and any other element(s) except hydrogen to
construct a molecule with a +1 charge and a tetrahedral molecular geometry. Draw
the three dimensional structure of this molecule and indicate all bond angles. Write
the
2017
formal charge next to each of the atoms in your structure. 91