Professional Documents
Culture Documents
Gene
Gene
Gene
1
Continued…
• Contents:
1. Introduction
2. Mutation
3. Categories of Genetic Disease
4. Diagnostic Approach
5. Genetic Counseling
1. Introduction
• Human genome project- about 100,000
genes.
• All diseases involve changes in gene
structure or expression.
• Chromosomes
• DNA+ Histone
• dNT
• A, G, T, C
The Cell
Nucleus
12
Sex chromosomes
O Genetic sex = composition of X and Y
O Large X: many genes, many activities
O Small Y: almost entirely male sexual
differentiation.
O Female: XX, male XY
O One X randomly inactivated and
nonfunctional after first week of embryonic
development
O Same inactivated X in descendant cells
karyotype
14
Gene locus
• 23 paired
chromosomes
• P&Q arms (short
&long)
• Regions , 1,2 or 3
• Bands
• Sub bands
• e,g
12q22,1
15
Alleles: alternate forms of a gene can
occupy the same locus (homozygous,
heterozygous)
Recessive gene: expressed only when
homozygous
Dominant gene: expressed whether
homozygous or heterozygous,
both expressed when co-dominant
Sex-linked gene: only X-linked in males,
most are recessive, homozygous (no
allele on Y) 16
Genome
O Sum total of all genes contained in a
cell’s chromosomes
O Identical in all cells
O Not all genes are expressed in all cells
O Not all genes are active all the time
O May code for enzymes or other
functional proteins, structural proteins,
regulators of other genes
Human Genome
O 3 billion+ pairs of DNA nucleotides
O ~ 50,000 – 100,000 genes
O Protein-coding Genes = <10% of human genome
O Exons: parts of the DNA chain that code for
specific proteins
O Introns: the parts in-between the exons
O Both exons and introns are transcribed but only
the exons are translated (introns are removed from
mRNA before leaving nucleus)
O”Junk DNA”: no obvious function but 80%
expressed
Central dogma
19
mRNA and t RNA
21
Continued…
• Hereditary(familial) or Genetic disorders-
Derived from one's parents, transmitted
in the gametes through the generations.
• Can occur
Spontaneously during cell division.
Induced by mutagens (Radiation, infections &
chemicals)
Continued…
• Can affect
Germ line cells (ovum and gametocyte)-
genetic disease.
25
Gene mutation
– Results in partial or complete deletion
of gene, more often affect single gene
– has three types
A. point mutation
B. deletion and insertion
C. tri nucleotide repeat mutations
26
A, Point mutations
• result from the substitution of a single nucleotide
base by a different base, resulting in the
replacement of one amino acid by another in the
protein product
types of point mutation
– Missense mutations
– nonsense mutations
– Silent mutations
Missense mutation
• Change in single base pair results in
changing the amino acid
– If biochemically similar to the original,
=>called a “conservative” missense mutation.
– “nonconservative” missense mutation
=>replaces the normal amino acid with a
biochemically different one
• e,g sickle cell anemia
• GAG (glutamic) GUC(valine)
28
Nonsense mutation
substation of one base stops the
transcription
Ex. βo – thalassemia
29
Silent mutation
• Point mutations which don’t have change
in the amino acids
UUU UUC
30
B, Deletions and insertions
31
Deletion and insertion can result in one of the
following:
Coding sequences => Frame shift changing
=> Non frame shift
changing
33
C,Trinucleotide repeat mutations
• Trinucleotide repeat mutations - these
mutations are characterized by
amplification of a sequence of three
nucleotides.
– E.g. in fragile X syndrome, there are 250
to 4000 tandem repeats of the sequence
CGG within a gene calledFMR1.
– In normal populations, the number of
repeats is small, averaging 29
34
2.2. Mutation effect
• Mutation
• Tissue injury
• Genetic diseases.
Genetic Disorders
• Genetic disorders are far more common than is widely
appreciated.
• The lifetime frequency of genetic diseases is
estimated to be 670 per 1000.
• Furthermore, the genetic diseases encountered in
medical practice represent only the tip of the iceberg,
that is,
– those with less extreme genotypic errors that permit full
embryonic development and live birth.
– It is estimated that 50% of spontaneous abortuses during
the early months of gestation have a demonstrable
chromosomal abnormality
• About 1% of all newborn infants possess a gross
chromosomal abnormality,
3. Categories of Genetic Diseases
a. The criteria
b. Additional features.
c. Pathogenesis
d. Clinical examples
Continued…
a. Criteria
• The transmission of the trait is from
generation to generation without skipping.
• Except for new mutation, every affected child
will have an affected parent.
• both males and females are affected, and both
can transmit the condition
• Mating of affected heterozygote to a normal
homozygote, each child has a 50% chance to
inherit the abnormal allele & be affected & a 50
% chance inherit the normal allele.
Continued…
• The 2 sexes are affected in equal numbers.
Continued…
b. Additional features.
• New mutations
–With every autosomal dominant disorder, some proportion of
patients do not have affected parents
• Ex. Achondroplasia.
• Clinical features can be modified by variations in
penetrance and expressivity
• Reduced penetrance.
• This is referred to asincomplete penetrance.
• Penetrance is expressed in mathematical terms.
– Thus, 50% penetrance indicates that 50% of those who carry
the gene express the trait
• Variable expressivity- Phenotyic spectrum
• Ex. Neurofibromatosis type 1
• if a trait is seen in all individuals carrying the
mutant gene but is expressed differently
among individuals, the phenomenon is called
variable expressivity.
• For example, manifestations of
neurofibromatosis type 1 range from brownish
spots on the skin to multiple skin tumors and
skeletal deformities
• In many conditions the age at onset is delayed;
symptoms and signs may not appear until
adulthood (as in Huntington disease).
Neurofibromatosis
• Café au lait spots
Neurofibromatosis
49
Continued…
c. Pathogenesis
i. Loss of function- structural and regulator protein
- 50% reduction in these proteins.
- ex. LDL receptor and Collagen.
• Ocular
o Ectopia lentis
Continued…
• Skeletal
o Pectus excavatum
o Scoliosis
o Joint laxity.
o Ratio of the upper segment to the lower
segment of body is usually 2 SDs below mean
for age, race, and sex
Continued…
Continued…
Joint
hypermobility
59
Continued…
Diagnosis
• Clinical
Skeletal changes
Ectopia lentis
Aortic aneurysm (ultrasound or x-ray)
• Histology
Cystic medial necrosis of aorta (autopsy)
Dissecting aortic aneurysm most common
cause of death
Continued…
• Genetic and molecular
Problematic because there are 500
distinct mutations.
66
67
Complications
• Joint dislocation
• Skin trauma
• serious internal complications.
– rupture of the colon and large arteries (vascular
EDS)
– ocular fragility with rupture of cornea and
retinal detachment (kyphoscoliosis EDS)
– diaphragmatic hernia (classic EDS
• Poor wound healing
Familial hypercholesterolemia
b. Additional features
Less variable expressivity than autosomal
dominant.
Commonly show complete penetrance.
• Generalized lymphadenopathy
• Pathologic fractures & bone pain due to erosion of
the bone.
Diabetes insipidus
Lesch-Nyhan syndrome
Fragile X syndrome
Duchenne muscular dystrophy
Hemophilia A & B
Continued…
• Chronic granulomatous disease of childhood
.
1. Karyotype.
Is an exchange of chromosomal
segments between 2 non-homologous
chromosomes.
138
• True hermaphrodites
– have both ovarian and testicular tissue
– Extremely rare
– in some cases ,there is a testes on one side
and an ovary on the other
– In others there is a combined ovarian and
testicular tissue – ovotestes
– 46, XX in 50%, the remaining are mosaics with
46,XX/46XY
139
True hermaphrodite
• Pseudohermaphrodites
– have disparity between gonadal and phenotypic sex
• Female pseudohermaphrodite
– has ovaries and penis, usually because of exposure
to male hormones before birth
– 46XX, 20 to androgen in congenital adrenal
hyperplasia
– The usual problem is a glitch in glucocorticoid
synthesis, in which steroids are shunted into male
pathways
– The "penis" is really a big clitoris
141
male pseudohermaphrodite
• has a vulva and testes
• defects in androgen
– synthesis
– action (receptor)
– Both
• Eg.testicular feminization
142
C. Multifactorial Disorder
• Are more common than mendelian disorders.
• Result from the combined actions of
environmental factors & 2 or more mutant genes
having additive effects (i.e. the greater the
number of inherited mutant genes, the more
severe the phenotypic expression of the disease).
• The disease clinically manifests only when
– the combined influences of the genes &
– the environment cross a certain threshold.
• 2-7% recurrence for 10 relatives
Continued…
• Diabetes mellitus
• Hypertension
• Ischemic heart disease
• Gout
• Schizophrenia
Continued…
• Bipolar disorders
• Neural tube defects