The document outlines the three main steps of translation: initiation, elongation, and termination. Initiation involves assembly of the ribosomal subunits, mRNA, tRNAs, and initiation factors. In elongation, one amino acid is added to the growing polypeptide chain in each cycle through binding of aminoacyl-tRNA to the A site, peptide bond formation, and translocation. Termination occurs when a stop codon enters the A site, releasing the completed protein.
The document outlines the three main steps of translation: initiation, elongation, and termination. Initiation involves assembly of the ribosomal subunits, mRNA, tRNAs, and initiation factors. In elongation, one amino acid is added to the growing polypeptide chain in each cycle through binding of aminoacyl-tRNA to the A site, peptide bond formation, and translocation. Termination occurs when a stop codon enters the A site, releasing the completed protein.
The document outlines the three main steps of translation: initiation, elongation, and termination. Initiation involves assembly of the ribosomal subunits, mRNA, tRNAs, and initiation factors. In elongation, one amino acid is added to the growing polypeptide chain in each cycle through binding of aminoacyl-tRNA to the A site, peptide bond formation, and translocation. Termination occurs when a stop codon enters the A site, releasing the completed protein.
Initiation • Assembly of the components of translation • Two ribosomal subunits • mRNA • Before initiation, aminoacyl-tRNA synthetases attach amino acids to their respective tRNAs (charging) • Requires hydrolysis of ATP à AMP • Proofreading is possible to remove incorrect amino acids • Initiation factors (IF-1, IF-2, IF-3, eIF) • GTP (and ATP for eukaryotes) Initiation • In eukaryotes, the small (40s) ribosomal subunit binds close to the cap structure at the 5’-end of the mRNA and moves 5’ à 3’ along the mRNA until it encounters the initiation codon (AUG).
• Initiation codon is recognized by a special initiator
tRNA = attachment of Methionine (eukaryotes)/ N-formylated Methionine (prokaryotes) Initiation • In both prokaryotic and eukaryotic cells, this N-terminal Met is usually removed before translation is completed Elongation • A cyclic process on the ribosome in which one amino acid at a time is added to the growing peptide chain • Requires elongation factors • Steps: 1. Binding of aminoacyl tRNA to the A site 2. Peptide bond formation catalyzed by peptidyl transferase 3. Translocation of the ribosome on the mRNA 4. Expulsion of the deacylated tRNA from the P- and E-sites Termination
• Occurs when one of the three termination
codons moves into the A site
• Results in the release of the newly
synthesized protein and dissociation of the ribosomes and mRNA Keypoints in Protein Synthesis
tRNA Wobble Hypothesis
• In most cases, accurate base pairing is required only in the first two nucleotide positions of an mRNA codon • Allows a single tRNA to recognize more than one codon Keypoints in Protein Synthesis Energy Requirement • Addition of a single amino acid to the polypeptide chain requires cleavage of four high-energy bonds from ATP and GTP: • tRNA aminoacylation: ATP à AMP • Loading tRNA onto ribosome: GTP à GDP • Translocation: GTP à GDP Post-translational Modifications • Removal of excess amino acids • Phosphorylation • Glycosylation • Hydroxylation • Proteins that are defective or destined for rapid turnover are marked for destruction by ubiquitin and degraded by proteasomes