HMGCS2 (block 2)

1: rs752729912 2: rs1386957244 3: rs1382579134 5: rs1401213260

6: rs1333199361 8: rs764299408 10: rs1274983621
15: rs137852636 15: CM011366 16: rs879133941 18: rs757431290
20: rs867469566 26: rs779249605 29: rs1237226874
29: CM0911409 33: rs746217014 33: CM154437 34: rs758839673
35: rs137852640 35: CM032943 40: rs1255800042
44: rs1289541397 47: rs1486964047 50: rs780406594
56: rs748155656 57: rs993282740 58: rs1026894407
59: rs866366934 63: rs756896188 65: rs916186024
66: rs1051823691 74: rs1338594261 76: rs748883811
77: rs770478547 84: rs1172810724 90: rs774091075
91: rs1557993907 92: rs1557993914 93: rs890302302
99: rs1313393068 100: rs759228303 103: CD154598
104: rs767366737 105: rs775528207 107: rs760689678
109: rs1321279061 113: rs1406920400 115: rs370900322
120: rs1232767876
123: rs764209022 131: rs1350489274 133: rs1212314291 136: rs1553241043 139:
rs753951770 142: rs587741129 146: rs375313694 148: rs750709310 151:
rs1251993883 154: rs587616028 156: rs780431922 157: rs1393101212 159:
rs1436348108 160: rs1173958102 163: rs751997256 166: rs780926888 167:
rs755489615 168: rs1300010645 169: rs138170167 171: rs368014391 172:
rs770521945 177: rs758033248 178: rs1246669403 182: rs1235493293 184:
rs928663340 186: rs1453735975 187: rs146073837 188: rs147906427 189:
rs200607527 190: rs1397104251 196: rs1252609545 199: rs1260008829 200:
rs145633208 201: rs768707273 207: rs1250760247 210: rs776751915 211:
rs372251981 212: rs765384188 217: rs1426710599 219: rs750575658 224:
rs763241833 229: rs955697615 230: rs766672926 232: rs201187096 233:
rs751909473 237: rs1332784240 238: rs147746231 239: rs781647908
124: rs1081752592 175: rs1066799129 226: rs1078661579
130: rs1151233088
245: rs1024035971 247: rs1303628202 256: rs1557994090 260: rs144921290 261:
rs771955824 263: rs587697520 265: rs41302817 266: rs1557994116 269:
rs114033510 272: rs1270679177 273: rs1469561308 274: rs779916834 275:
rs768463219 277: rs1484767754 278: rs1187974723 280: rs768623326 282:
rs776664327 283: CM1010378 284: rs1162910493 286: rs1420068119 287:
rs1462212320 289: rs1479205954 292: rs761845625 294: rs151187711 298:
rs1433333813 300: rs763001714 303: rs766584879 308: rs1413432644 310:
rs774411362 311: rs774598305 313: rs759842428 315: rs587688416 322:
rs145514933 325: rs756658111 326: rs1469630685 328: rs142709072 330:
rs1217700912 337: rs749941890 341: rs1485324823 344: rs1185689932 346:
rs758019802 349: rs1199311850 353: rs1553241079 353: rs747388657 353:
rs779833095
354: rs746685363 360: rs181428774
277: rs1084362133 318: rs308433437 352: rs288130580 243: rs1145979756
361: rs138739620 366: rs1402619037 367: rs1051817360 368: CM1010375 373:
rs911961081 375: rs1160328101 375: rs28937320 375: CM032942 376:
rs201239391 379: rs772149969 386: rs866803752 389: rs756404916 393:
rs199670317 400: rs200816212 404: rs1331676978 404: rs749336738 407:
rs771019602 407: rs1278392688 409: rs774514655 411: rs375279621 416:
rs1346871356 416: rs1475398406 420: rs1208729772 422: rs1282393883 423:
rs77241754 424: rs200675569 427: rs775905632 430: rs1231210408 431:
rs761008285 433: rs1035647830 434: rs764628597 436: rs1452967906 437:
rs1175855181 438: rs754348576 438: rs769502150 439: rs766022017 441:
rs587615326 444: rs1352232809 446: rs1285274003 449: rs1444004438 453:
rs1309529302 457: rs1389498414 460: rs371588866 461: rs780766127 463:
rs1305297789 464: rs747971689 465: rs1195126364 466: rs755903114
470: rs374244366 471: rs749252879 473: rs941134548 476: rs1467271396 476:
rs773027670 478: rs1195925602 T
424: rs1138293582 474: rs1149128906
481: rs770929896 497: rs989262226 500: rs587652395 503: rs914679650 513:
rs1248845647 540: rs1376557965 542: rs1298168190 551: rs891472407 564:
rs946513941 567: rs1013902225 579: rs1487698725 591: rs1193608306 593:
rs1183642531 600: rs1473195349
499: rs299634845 503: rs1073850266
635: rs1249189073 642: rs760923268 647: rs189114835 651: rs1286390926 674:
rs1557994372 676: rs1220581750 680: rs1166805772 685: rs1418804943 689:
rs1406200911 693: rs1314475641 694: rs1228368801 696: rs1167124181 705:
rs1347955054 711: rs587607351 712: rs766667753 715: rs587653750 719:
rs1002412524
714: rs309309616
724: rs1348336849 731: rs943262545 744: rs1406021669 745: rs1033850257 748:
rs1191612209 755: rs1441009 759: rs587595347 764: rs587671289 773:
rs919494794 779: rs587751394 792: rs929007678 800: rs2843020 801:
rs1255550634 809: rs1219969487 816: rs1342905381 817: rs887524995 820:
rs587678254 827: rs587730254 828: rs906076232 828: rs1229721567 830:
rs1295657099 832: rs1441842717 833: rs76331743 833: rs1557994452 834:
rs1168571610 837: rs1557994474 837: rs1467282225 838: rs1373545538 840:
rs1320361001
752: rs293990089 760: rs1074805581 799: rs300137721 834: rs309522975
778: rs1142189090 787: rs1135883202
841: rs1035905144 842: rs1213440581 844: rs1431377083 847: rs1269106071
849: rs1466644718 853: rs1269135072 856: rs1191582310 859: rs1457012452
866: rs925790606 867: rs956210905 869: rs1199961038 872: rs1318071929 878:
rs988841313 880: rs935824018 882: rs1310970756 888: rs1022071243 894:
rs1303797400 903: rs1235517226 914: rs1376394186 920: rs1329615167 941:
rs1053468846 950: rs759668122 951: rs1302353473 952: rs1464443912 953:
rs1379334740 954: rs181822384 955: rs968810779 957: rs891698431
885: rs194304073 934: rs304428626
946: rs284334520
963: rs1014371156 964: rs776726862 965: rs1198252543 974: rs1482538883
974: rs1411893553 992: rs1460780863 993: rs587775125 999: rs1390513336
1003: rs369528164 1003: rs587611776 1004: rs905488351 1016: rs1001293749
1017: rs1313472283 1021: rs1418862697 1023: rs587637911 1024: rs763141264
1027: rs1340590953 1035: rs1449572970 1036: rs376484827 1040: rs1425085970
1043: rs775542283 1044: rs1488250645 1046: rs1284264310 1051: rs767157936
1053: rs994999678 1054: rs1354438203 1057: rs1265136840 1061: rs1228556428
1062: rs943187292 1068: rs1557994581 1071: rs1269199025 1074: rs1331613389
1080: rs1027013634
997: rs290194382 1070: rs1070048908 1078: rs302214345

1082: rs975975775 1086: rs923199622 1087: rs1161151388 1092: rs950990945

1101: rs929245669 1102: rs1047372862 1107: rs887480525 1118: rs1477759466
1125: rs941781976 1126: rs1284147016 1131: rs1195757204 1137: rs1447997548
1139: rs769970052 1147: rs1289425442 1153: rs1231886328 1154: rs1443144499
1156: rs1212320914 1157: rs35238701 1160: rs1273835639 1161: rs1475020909
1162: rs1557994631 1162: rs1218123482 1165: rs1183103920 1166:
rs1413967582 1167: rs1315952134 1168: rs1280069874 1168: rs1471468792
1171: rs906000748 1182: rs587771753 1183: rs1402802347 1184: rs1321343380
1189: rs1388089149 1190: rs1416038999 1191: rs1003013633 1193: rs1169309098
1194: rs964651164 1200: rs368272885
1086: rs284867760 1157: rs294825073 1201: rs892035391 1202: rs1476031225
1206: rs1352761551 1215: rs1010926491 1217: rs1021622064 1219: rs969156161
1221: rs1237333183 1222: rs1279547080 1225: rs1346344145 1229: rs1456543811
1252: rs868456497 1255: rs1215018154 1263: rs1344231560 1269: rs1006944549
1276: rs1235198368 1279: rs56239558 1286: rs988653206 1288: rs964512133
1290: rs1206185528 1291: rs975900776 1292: rs755805124 1297: rs1171151421
1299: rs1455892055 1300: rs1180834092 1303: rs913178922 1315: rs1478988069
1264: rs305631292 1274: rs282129945 1276: rs1084221985 1288: rs194566966
1322: rs950663047 1361: rs1170694620 1363: rs983809568 1372: rs949951549
1373: rs1276481728 1377: rs187299639 1394: rs1429793917 1399: rs1309542666
1402: rs1237434312 1419: rs1375105296 1428: rs1368304480 1426: rs170967301
1332: rs1081755333
1345: rs1149894576 1447: rs776420258 1449: rs941701539 1450: rs587757006
1452: rs867852616 1465: rs1158430851 1470: rs192409015 1472: rs1301837602
1477: rs587716519 1482: rs1472545242 1485: rs938460732 1486: rs1229211003
1487: rs1276786797 1488: rs587595074 1494: rs1189898156 1502: rs1485966298
1513: rs754805166 1514: rs891998379 1517: rs1318315247 1522: rs1195408061
1530: rs1010478876 1547: rs1227232018 1553: rs587669474
1477: rs293599975 1548: rs308273760
1567: rs995450433 1572: rs1417097655 1575: rs587726531 1583: rs12079115
1591: rs1418311177 1604: rs1160198428 1609: rs886570922 1618: rs1411646345
1630: rs1190181201 1633: rs1475472433 1635: rs587671958 1665: rs774399499
1666: rs751988060 1674: rs1486757773 1677: rs1242334361
1573: rs1077444032 1592: rs289159825 1615: rs1065957597 1627: rs297880536
1616: rs1139574569
1689: rs1220282370 1692: rs998312697 1694: rs112686539 1697: rs964704529
1693: rs1078373628 2685: rs950617143 2694: rs1274448816 2698: rs1233397870
2699: rs983350180 2721: rs1553241186 2721: rs35428949 2722: rs72506204
2725: rs909139407 2726: rs974701660 2731: rs1163455398 2733: rs587624692
2741: rs767990152 2745: rs962984199 2746: rs587684681 2748: rs1289833036
2749: rs767582968 2757: rs368961538 2760: rs1167157825 2760: rs1388882848
2686: rs305905076 2752: rs783390522
2762: rs1462076529 2764: rs1324536140 2801: rs989262386 2811: rs1430242236
2814: rs913072982 2817: rs1370922569 2824: rs1487276209 2828: rs753268381
2829: rs1213760307 2830: rs981375804 2838: rs1299950256 2851: rs1324717170
2860: rs1309807123 2862: rs1296688177 2876: rs927178004 2880: rs772103260
2768: rs1072586207 2774: rs289218214 2777: rs1067870556 2829: rs299977080
2882: rs765957203 2884: rs1227037732 2885: rs1266230365 2891: rs1038034521
2899: rs1057317187 2909: rs587764406 2910: rs1355069996 2913: rs946208757
2931: rs180803835 2939: rs1047220822 2950: rs1396505925 2953: rs1043285948
2969: rs1193807467 2977: rs904763786 2978: rs1190378184 2979: rs1235774749
2886: rs120496612 2905: rs120496596
2881: rs1073532114 2888: rs1074995401 2893: rs309482762 2936: rs1073109788
3005: rs886625346 3009: rs1481889640 3028: rs1252459227 3032: rs1008999910
3033: rs1346248247 3038: rs1306090510 3042: rs1235224841 3054: rs150274401
3055: rs942956442 3057: rs587746666 3064: rs139000085 3073: rs773249750
3087: rs1369822985 3090: rs1302264464 3096: rs1432795021 3100: rs587676510
3042: rs170967300 3085: rs120496578
3057: rs290543027 3082: rs1068757151 3100: rs301472349

3165: rs311262548 3170: rs291766727 3171: rs1071728734 3190: rs1082468488

3198: rs300052327 3199: rs1077902103 3205: rs311116961 3215: rs290912683

3361: rs1077249784 3384: rs301486582 3410: rs1072206387 3434: rs1077358421

3443: rs1079947519 3444: rs282075558
3739: rs1174056630 3742: rs1418675699 3745: rs587761164 3762: rs1361745940
3766: rs1183325680 3770: rs901210754 3771: rs376958600 3774: rs1251861109
3775: rs1163225294 3781: rs1484984864 3783: rs747143770 3788: rs886249285
3802: rs1005135390 3803: rs957566866 3808: rs587628935 3809: rs963244156
3813: rs1241272184 3818: rs587714559 3825: rs1412809980 3825: rs879722733
3827: rs587770562 3832: rs981261353 3833: rs1360008355 3834: rs927230547
3835: rs1382311453 3837: rs1381720606
3776: rs120496554
3734: rs1076924255 3735: rs295791933 3773: rs305345203 3780: rs284623965
3822: rs296395652
3843: rs1313777121 3845: rs1160005441 3856: rs958611024 3858: rs1367317271
3859: rs1033967716 3860: rs1474489950 3863: rs1260277475 3864: rs919612563
3873: rs959706636 3876: rs1231612336 3885: rs1046832731 3899: rs912298570
3908: rs1351700623 3911: rs1264897466 3913: rs1231577920 3932: rs1329575627
3933: rs587644997 3952: rs1210559566 3960: rs992550195
3879: rs170967299
3862: rs304140298 3879: rs289715686 3885: rs295991607
3963: rs1399162343 3964: rs912987742 3965: rs1320056495 3981: rs1258886918
3985: rs775316789 4006: rs1382386786 4009: rs1040516746 4012: rs945846094
4013: rs771048866 4015: rs1485291752 4023: rs996449381 4025: rs1475382893
4043: rs1371650286
3985: rs26705570
3995: rs306273053 4012: rs286208331 4018: rs299498420 4025: rs310238673
4036: rs1071185018 4037: rs286736127
4004: rs1138785166
4156: rs1195822223 4162: rs1447771700 4162: rs12563433 4163: rs1211888818
4170: rs1469932740 4170: rs893155723 4173: rs61787148 4177: rs1417662848
4180: rs942924385 4181: rs780766221 4182: rs901136939 4183: rs1300875500
4184: rs1442456435 4187: rs1343939000 4194: rs587676190 4198: rs1002747924
4199: rs587705558

4158: rs298529337 4176: rs312080356 4197: rs195322591

4201: rs1404394219 4204: rs1395017562 4207: rs1413221180 4208: rs587609133
4214: rs1350949562 4222: rs145752253 4230: rs769085187 4236: rs1005656929
4252: rs765648231 4256: rs974033820 4259: rs1016505868 4263: rs1455754960
4265: rs1253646715
4203: rs170967298
4235: rs1065178904 4248: rs301438700 4283: rs308995805
4601: rs1203948443 4603: rs919817437 4607: rs1196144634 4610: rs1316273001
4623: rs1346962981 4632: rs1233828363 4633: rs1301000017 4637: rs587764304
4644: rs899037728 4645: rs758342398 4649: rs3790696 4651: rs1034231170
4656: rs959675412 4659: rs2843019 4671: rs149270373 4675: rs1483621370
4637: rs170967297 4632: rs1083466538 4678: rs1075876880
4686: rs967530338 4687: rs978569637 4688: rs926079731 4695: rs756758557
4698: rs964212116 4699: rs1557995117 4703: rs975640562 4706: rs922861352
4710: rs1039393145 4720: rs1436771580 4726: rs1406157613 4729: rs1395958360
4731: rs934287462 4754: rs1176668421 4757: rs922116463 4762: rs1419036109
4763: rs764746833 4769: rs1277877402 4777: rs587618935 4781: rs587682052
4782: rs3828089 4783: rs1173309854 4784: rs765877685 4789: rs1410922016
4796: rs114228511
4704: rs1079715767 4719: rs293474129 4759: rs1083318213
4805: rs767979283 4827: rs1376276533 4832: rs1001340516 4857: rs1055583535
4858: rs895704429 4865: rs1159253232 4877: rs1474822313 4889: rs587691947
4898: rs113478867 4904: rs1002968947 4905: rs1189788526 4906: rs1387327706
4887: rs170967296 4910: rs170967295
4803: rs301577769 4812: rs283144703 4837: rs1067386917 4840: rs1074724167
4847: rs294152404 4848: rs1075904904
4921: rs1485916962 4925: rs1303282134 4939: rs77067711 4940: rs894371266
4941: rs1232913549 4949: rs753538775 4956: rs1274659939 4962: rs587644928
4964: rs778796691 4972: rs967081217 4975: rs1292041470 4978: rs3790694
4982: rs148407051 4985: rs964180021 4986: rs1428844323 4990: rs758313784
4993: rs1319040488 4994: rs975565121 4996: rs777748220 4999: rs3790693
5001: rs1166931352 5009: rs920947672 5019: rs587708532 5025: rs1418473883
5036: rs1184590265 5037: rs1486624085 5038: rs955808648 5039: rs932223797
4954: rs302993252 4996: rs1081548222 5002: rs1067672890
5044: rs1390820149 5052: rs1466803128 5057: rs1411884279 5067: rs587603025
5091: rs1168569090 5097: rs77937859 5102: rs1213228875 5105: rs908504776
5111: rs1353752126 5122: rs1392309022 5158: rs1328036167
5045: rs285443615 5051: rs1084984330
5162: rs12123085 5174: rs1353898216 5176: rs1168026952 5177: rs759756161
5178: rs776661376 5187: rs1419783920 5191: rs1295284323 5202: rs1452199601
5453: rs1368720820 5457: rs587596610 5462: rs34999762 5479: rs1254279024
5481: rs1213816883 5483: rs1489081555 5503: rs1297735266 5514: rs1041940271
5516: rs907271156 5517: rs1212493613
5527: rs1271844736 5528: rs926722341 5534: rs1557995284 5537: rs1369096157
5541: rs938122117 5555: rs1222787194 5566: rs587691042 5574: rs587722036
5578: rs587604552 5581: rs1463465230 5603: rs1370876780 5604: rs1172804375
5567: rs296504313 5605: rs1080123359
5686: rs785005168
5870: rs1432447146 5871: rs746124059 5880: rs1027316251
5881: rs1014554073 5891: rs887065205 5904: rs1193503689 5905: rs1476413081
5905: rs769456344 5910: rs1481921455 5921: rs1185071158 5923: rs778319331
5924: rs1041639768 5925: rs186244146 5927: rs1419060131 5929: rs1210662292
5930: rs999877430 5935: rs1003989575 5945: rs1032709410 5946: rs770014384
5952: rs1282802114 5953: rs963770176 5954: rs1557995373 5962: rs1316343988
5966: rs996635424 5970: rs3790692 5971: rs1351065329 5978: rs1312025249
5981: rs955574581 5983: rs1412768579 5996: rs1376891198
5945: rs1084848135 5987: rs306239170
6004: rs763469190 6005: rs587634390 6017: rs752515143 6019: rs587691729
6019: rs1452627515 6034: rs1361513080 6035: rs147220042 6036: rs1321117650
6038: rs775000484 6039: rs963003792 6049: rs587622165 6050: rs957944143
6050: rs190083421 6051: rs926666797 6053: rs1485677931 6057: rs914799165
6060: rs1241336974 6065: rs755353223 6066: rs1295521096 6089: rs946307549
6092: rs1231384896 6096: rs1357070680 6107: rs1334597735 6111: rs765932669
6117: rs1381270080
6040: rs170967294
6041: rs1079752698 6100: rs196186589
6015: rs1145778574
6122: rs775662531 6126: rs1333118746 6131: rs1382379166 6135: rs587750633
6136: rs866791829 6141: rs587652313 6144: rs894600314 6148: rs587681043
6149: rs1241526901 6151: rs587774238 6164: rs1370511829 6165: rs1188718564
6166: rs182527373 6176: rs1190269447 6179: rs587737774 6182: rs887007676
6185: rs935925172 6190: rs1415461885 6207: rs759199399 6209: rs764922257
6211: rs1284543293 6212: rs1159893019 6222: rs1004104081 6223: rs899531334
6237: rs587596641
6125: rs297950446 6194: rs306633441 6212: rs1078473060
6191: rs1140538704
6246: rs1040826719 6254: rs1393019451 6259: rs996561286 6260: rs901020508
6261: rs1029416171 6273: rs1393566426 6286: rs1164176292 6288: rs1461855520
6289: rs185698687 6309: rs1190694537 6311: rs1450353796 6326: rs1252412764
6331: rs74115092 6338: rs144457613 6344: rs1359183405 6346: rs371689835
6347: rs1004396474 6351: rs1265201223 6352: rs1369826959
6296: rs287832572 6353: rs296210701
6362: rs587679985 6372: rs190551141 6373: rs1442527336
6372: rs312055263 6382: rs287712212
6527: rs1333329002 6528: rs1354027335 6531: rs79665498 6547: rs1394723588
6551: rs974331032 6556: rs587665481 6559: rs1394763287 6560: rs977680453
6561: rs1479084381 6570: rs770279169 6570: rs1441008 6571: rs771848277
6571: rs1557995591 6572: rs1253653878 6586: rs587620311 6586: rs991707290
6587: rs1213341920 6593: rs1255664443
6580: rs170967293
6528: rs1072232393 6562: rs297872789 6570: rs309378004 6577: rs1068651037
6579: rs194489639
6559: rs1138955722 6592: rs1143846196
6615: rs866651455 6618: rs1220604989 6620: rs1345040865 6628: rs915969080
6631: rs1442067108 6632: rs1485433633 6654: rs931439693 6656: rs918023606
6658: rs1410893620 6660: rs945483254 6670: rs1311216105 6684: rs1234354238
6691: rs1425896436 6700: rs1158100448 6707: rs1468552910 6719: rs11585735
6626: rs300197363 6651: rs1067845197 6670: rs309979425 6690: rs290595150
6693: rs1084702599
6721: rs1468506663 6724: rs1414156232 6727: rs977266492 6730: rs1485184658
6754: rs1255152729 6755: rs924477428 6758: rs777621677 6760: rs1442676870
6771: rs182988803 6773: rs939906335 6775: rs1054379581 6779: rs1327689584
6782: rs901135184 6784: rs1229549525 6794: rs768033281 6796: rs1171431451
6797: rs996625818 6798: rs1301481596 6799: rs1450415065 6801: rs587731316
6804: rs1317697281 6805: rs1409989420 6812: rs932324339
6736: rs196607155 6750: rs285396998 6776: rs292253395 6783: rs303171216
6798: rs282675785
7925: rs367660700 7927: rs1051256163 7931: rs1390740061 7939: rs757236079
7949: rs587620771 7950: rs587684233 7951: rs1415344019 7955: rs1015755812
7972: rs1337855128 7978: rs1183424524 7979: rs781365039 7991: rs1440712726
7994: rs1241221629 7995: rs898675806 7998: rs1279458097 8002: rs995677033
8011: rs1268221249 8021: rs1033913571 8028: rs959340490
Bonobo ----TGATGGTA--GCATAATGAAAAATATAAGAAAGCT------
ATGTGCATTTGCCT------CTACCATGCACATCTATACACCCAGGTTCCTTGGGTATTTGGCAAGGAAAGACAC
Chimpanzee ----TGATGGTA--GCATAATGAAAAATATAAGAAAGCT------
ATGTGCATTTGCCT------CTACCATGCACATCTATACACCCAGGTTCCTTGGGTATTTGGCAAGGAAAGACAC
Gorilla ----TGATGGTA--GCATAATGAAAAATATAAGAAAGCT------
ATGTGCATCCGCCT------CTACCATGCACATCTATACACCCAGGTTCCTTGGGTATTTGGCAAGGAAAGACAC
Orangutan ----TGATGGRA--GCATAATGAAGAATATAAGAAAGCT------
ATGTGCATRCGCCT------CTACCATGSACATCTATAKACCCAGGTTCCCTGGGTATTTGGCAAGGAAAGACAC
7931: rs170967292 7974: rs170967291 7994: rs170967290 8004: rs170967289
Vervet-AGM ----CGATGGTA--GCACAATGAAGAATATAAGAAAGCT------
ACGTGCATCAGCCC------CTACCATGCACATCTATACACCTAGGTTCCCTGGGTATTTGGCAAGGAAAGACAC
Crab-eating macaque ----CGATGGTA--GCACAATGAAGAATATAAGAAAGCT------
ACGTGTATCAGCCC------CTACCATGCACATCTATACACCCAGGTTCCCTGGGTATTTGGCAAGGAAAGACAC
Macaque ----RGATGGTA--GCACAATGAAGAATATAAGAAAGCT------
ACGTGRATCAGCRR------CTACCATGCYCATCRATACACCCAGGTTCCCTGGGTATTTGGCAAGGAAAGACAC
7925: rs195126817 7971: rs307400505 7978: rs1077887461 7979: rs1080307289
7995: rs1072285186 8000: rs1075030075
Olive baboon ----CGATGGTA--GCACAATGAAGAATATAAGAACGCT------
ACGTGTATCAGCCC------CTACCATGCACATCTATACACCCAGGTTCCCTGGGTATTTGGCAAGGAAAGACAC
Gelada ----CGATGGTA--GCACAATGAAGAATATAAGAACGCT------
ACGTGTATCAGCCC------CTACCATGCACATCTATACACCCAGGTTCCCTGGGTATTTGGCAAGGAAAGACAC
Mouse Lemur ----GGATGGTA--GTGTCATGAAGAAAATAAGATGGCT-----------
AATAAGCTT------------CGCACATCTATACACCCAGCTTCCCTGGGTACCAAGCAAGGGAAGGTAC
Horse ----CAATGGTGGAGAGTCACAAAGAAAAGAAGAAGGCTAAGGAY-----
CACTACTCCCTACCC------CACACATCCATACAGCCAGGTTCCCTGGGTACCAGACAAAGGAAGACAC
7965: rs1144984063
Cat ----CAATGGCAGAGAATCAGTAAGAGAATAAGAAGCTTAAGGAG-----
CATCAGC-CCTTCTC------TACACATTGGTACAGCCAGGTTCCCTGGGTCCCAGGCAAGGGAAGACAC
Canada lynx ----CAATGGCAGAGAATCAGTAAGAGAATAAGAAGCTTAAGGAG-----
CATCAGC-CCTTCTC------TACACATTCGTACAGCCAGGTTCCCTGGGTCCCAGGCAAGGGAAGACAC
Leopard TGGACAATGGCAGAGAATCAGTAAGAGAATAAGAAGCTTAAGGAG-----
CATCAGCCCCTACTC------TACACATTCATACAGCCAGGTTCCCTGAGTCCCAGGCAAGGGAAGACAC

Human
TAGGTCAAAAYMATTTWTCTAARTAWWTARTARTCRTAGAAYRT-------------------------------
----------------ABAGKAAAAATKTAARGAAATAAARAAYT 8051: rs1013575823 8052:
rs1025421482 8057: rs966814988 8063: rs1021007367 8066: rs978614965 8067:
rs924403514 8070: rs957192274 8073: rs990042660 8076: rs1230434701 8077:
rs1236602327 8082: rs188724409 8083: rs921195300 8133: rs796575643 8136:
rs1433186810 8143: rs115885799 8147: rs745983682 8156: rs748419037 8159:
rs1460831489
Bonobo
TAGGTCAAAATCATTTTTCTAAATATTTAGTAGTCATAGAATAT-------------------------------
----------------AGAGTAAAAATGTAAGGAAATAAAGAACT
Chimpanzee
TAGGTCAAAATCATTTTTCTAAATATTTAGTAGTCATAGAATAT-------------------------------
----------------AGAGTAAAAATGTAAGGAAATAAAGAACT
Gorilla
TAGGTCAAAATCATTTTTCTAAATATTTAGTAGTCACAGAATAT-------------------------------
----------------AGAGTAAAAATGTAACGAAATAAAGAACT
Orangutan
CAGGTCAAAATCATTTTTCTAAATATTTAGTAGTCATAGAATAT-------------------------------
----------------AGAGTAAAAATGTAAGGAAATAAAGAACT
Vervet-AGM
TAGATCAAAATCATTTTTATAAATATTTAGTAGTCATAGAATAT-------------------------------
---------------------------------------AAAACT
Crab-eating macaque
TAGATCAAAACCATTTTTCTAAATATTTAGTAGTCATAGAATAT-------------------------------
---------------------------------------AAAACT
Macaque
TAGATCAAAARCATTTTTKTAAATATTTAGTAGTCATAGAATAT-------------------------------
---------------------------------------AAAACT 8051: rs283467243 8059:
rs1074184877
Olive baboon
TAGATCAAAATCATTTTTCTAAATATTTGGTAGTCATAGAATAT-------------------------------
---------------------------------------AAAACT
Gelada
TAGATCAAAATCATTTTTCTAAATATTTGGTAGTCATAGAATAT-------------------------------
---------------------------------------AAAACT
Mouse Lemur
CAGGTCAAAATCGCTTTTCTAAGTATTCAGTATTCACAGAATGC-----------------------
AAAGGAAAAAATGGAAGGAAAGAA-----------------------AGAACT
Horse TAGATCAAAGTCATTGTTCTAAGTA-------
TTCAAGGAATGCGGTGTAGAAACGGGAGGAAAGAA----------------------------------------
-------AGGGCT
Cat TAGATCACAGTCATTTTTCTAAGTA-------TTCATGGAATGCAGTG------
T----GGGAGGAA-----------------------------------------------TGGGCT
Canada lynx TAGATCATAGTCATTTTTCTAAGTA-------TTCATGGAATGCAGTG------
T----GGGAGGAA-----------------------------------------------TGGGCT
Leopard TAGATCATAGTCATTTTTCTAAGTA-------TTCATGGAATGCAGTG------
T----GGGAGGAA-----------------------------------------------TGGGCT

Human
RGTCCYARYGBGTAGYGGATGGKTWSG------------------------------------------------
--------------------------------------------- 8161: rs960307631 8166:
rs1435831055 8168: rs1181080048 8169: rs1405810708 8171: rs912249656 8176:
rs375200606 8183: rs1419796071 8185: rs1037192009 8186: rs770043834
Bonobo
AGTCCCAATGTGTAGTGGATGGTTTGG---------------------------------------------------------
------------------------------------
Human -----------------------
GGATTAGACAGAAACAYATAGRTGRCTG-----------
GSARMCTGAGKCRCTAAYRATAGCTGTRTTACSAWMRYYRCTGACAAHGGAAAACATR 8558:
rs1184340790 8560: rs916099595 8565: rs1248056867 8568: rs952877339 8584:
rs1430029718 8586: rs751907362 8587: rs898646057 8593: rs1224230884 8595:
rs759254398 8598: rs1272770474 8600: rs193296189 8601: rs940021730 8610:
rs1055252193 8615: rs1440341637 8617: rs922508789 8618: rs1295153400 8619:
rs895385062 8620: rs1050000304 8621: rs1166513704 8622: rs373109092 8630:
rs946422227 8640: rs1443700726
Bonobo -----------------------
GGATTAGACAGAAACACATAGGTGGCTG-----------
GGAGCCTGAGGCACTAACGATAGCTGTGTTACCATCATCACTGACAATGGAAAACATA
Chimpanzee -----------------------
GGATTAGACAGAAACACATAGGTGGCTG-----------
GGAGCCTGAGGCACTAACGATAGCTGTGTTACCATCATCACTGACAATGGAAAACATA
Gorilla -----------------------
GGATTAGACAGAAACACATAGGTGGCTG-----------
GGAGCCTGAGGCACTAACAATAGCTGTGTTACCATCATCGCTGACAATGGAAAACATA
Orangutan -----------------------
GGATTAGACAGAAACACACAGGTGGCTG-----------
GGAGCCTGAGGCACTAACGATAGCTATGTTACCATCATCGCTGATGATGGAAAACATA
Vervet-AGM -----------------------
GGACTAGACAGCAACACATAGGTGGCTG-----------
GGAGCCGGAGGCACTAACGATAGCTGTATTACCATCATTGCTGACTATGGAAAACATA
Crab-eating macaque -----------------------
GGACTAGACAGCAACACATAGGTGGCTG-----------
GGAGCCAGAGGCACTAACGACAGCTGTATTACCATCATCGCTGACTATGGAAAACATA
Macaque -----------------------
GGACTAGACAGCAACACARAGGTGGCTG-----------
GGAGCCYGAGGCACTAACGARAGCTGTATTACCATCATCYCTGACTATGGAAAACATA 8562:
rs295193999 8589: rs196050648 8603: rs196945791 8622: rs1078065442
Olive baboon -----------------------
AGACTAGACAGCAACACATAGGTGGCTG-----------
GGAGCCAGAGGCACTAACGACAGCTGTATTACCATCATCGCTGACTATGGAAAACATA
Gelada -----------------------
CGACTAGACAGCAACACATAGGTGGCTG-----------
GGAGCCAGAGGCACTAACGACAGCTGTATTACCATCATCGCTGACTATGGAAAACATA
Mouse Lemur
GACTCAGTCTCAAAAAAAATAAAAGAATAAAAAATAACACAGAGGTGGCTG-----------
GAAGCCCAAGTCACCAAATATAGCTGTGTTATCATCTTCACT-----GGGAAAACACA
Horse ---------------------------------------------------
GTATGGCTTAGGGATCCTGAGGGGCTAMCTATAGCTGTGTTACCACCAACACT-----GGGAGACGGCA 8599:
rs1150263496
Cat
--------------------------------------------------------------
GGGTCCCCAGGTGCTAGCTGTAGTTATTTTACTACCAACGCT-----GGTAGGCTCCA
Canada lynx
--------------------------------------------------------------
GGGTCCCGAGGTGCTAGCTGTAGTTATTTTACTACCAACGCT-----GGTAGGCTCCA
Leopard
--------------------------------------------------------------
GGGTCCCGAGGTGCTAGCTGTAGTTATTTTACTACCAACGCT-----GGTAGGCTCCA

Human
AGMACYTRAGYCATGTTCARGGACYRTTTACAAAGRMAAGGAGTGYGMATGTT---CTTY-T--T----------
GCAAAGAGYRKRTRCACAT-------------ACRYACATA---- 8643: rs1268847015 8646:
rs760813973 8648: rs1193379325 8651: rs140012411 8660: rs1489111968 8665:
rs587721807 8665: rs1232635812 8666: rs967120216 8676: rs1344569854 8677:
rs1301365961 8686: rs1233856848 8688: rs1310461831 8700: rs999574904 8724:
rs1219693367 8725: rs749597071 8726: rs1003198152 8727: rs1411490959 8729:
rs1032445977 8750: rs1557995868 8751: rs182562744
Bonobo
AGCACTTGAGCCATGTTCAGGGACTATTTACAAAGAAAAGGAGTGTGCACGTT---CTTC-T--T----------
GCAAAGAGCATGTACACGT-------------ACACACATA----
Chimpanzee
AGCACTTGAGCCATGTTCAGGGACTATTTACAAAGGAAAGGAGTGTGCATGTT---CTTC-T--T----------
GCAAAGAGCATGTACACAT-------------ACACACATA----
Gorilla
AGCACTTGAGCCATGTTCAGGGACTATTTACAAAGAAAAGGAGTGTGCATGTT---CTTC-T--T----------
GCAAAGAGCATGTACACAT-------------ACACACATA----
Orangutan
AGCACTTGGGCCATGTTCAGGGACTATTTACAAAGAAAAGGAGTGTGCATGTT---CTTC-T--T----------
GCAAASAGCATGTACACAT-------------ACACACYTA---- 8721: rs170967288 8754:
rs170967287
Vervet-AGM
AGTACTTGGGCCACATTCAGGGAGTATTTACAAAGAAAAGGAGTGTGCCTGTT------C-T--T----------
ACAAAGAACATGTACACAT-------------ACACACATA----
Crab-eating macaque
AGCACTTGAGCCACATTCAGGCAGTATTTACAAAGAAAAGGAGTGTGCCTGTT------C-T--T----------
GCAAAGAACATGTACACAT-------------ACACACATA----
Macaque
AGKACTTGYGCCACATTCAGGSAGTATTTACAAAGAAAAGGAGTGTGRCTGTT------C-T--T----------
GCAAAGAACATGTACACAT-------------ACACACATA---- 8643: rs196612030 8649:
rs194989900 8662: rs194846304 8688: rs297978254
Olive baboon
AGCACTTGAGCCACATTCAGGCAGTATTTACAAAGAAAAGGAGTGTGCCTGTT------C-T--T----------
GCAAAGAACATGTACACAT-------------ACACACATA----
Gelada
AGCACTTGAGCCACATTCAGGCAGTATTTACAAAGAAAAGGAGTGTGCCTGTT------C-T--T----------
GCAAAGAACATGTACACAT-------------ACACACATA----
Mouse Lemur
AGCACTCGGGCCACACTGAGGGGGTGTTTACAAAGAAAAGGAGTGTGTGTGTG------C-C--
T--------------GGCACATGCGCAAAC-------------ACGCACATA----
Horse
AGCACTTGGGCCAGATTTGAGGAYTGTTTACAAAGAAAAGGAGTGCTTTTGCACTT---
CGGTGCACAAGCACAT----TGCACACATACGCACAAACACATTACATACACACATGCTCA 8664:
rs396290040
Cat
AGCACATGGGCCAAAGCGGAGGAGTGTTTACAAATAAAAGGTATGCGTGTGTGCTT---CTGTGCGCA-
ACCCAC----TGCGCATGCGCGCAC-------------GCACACACACGTA
Canada lynx
AGCACATGGGCCAAAGCGGAGGAGTGTTTACAAATAAAAGGTATGCGTGTGTGCTT---CTGTGCGCA-
ACCCAC----TGCGCATGCGCGCAC-------------GCACACACACTTA
Leopard
AGCACATGGGCCAAAGCAGAGGAGTGTTTACGAATAAAAGGTATGTGTGTGTGCTT---CTGTGCGCA-
ACACAT----TGCGCATGCGCGCAC-------------ACACACACACTTA

Human ----AAS-AY-------------------------
ACRYTTHCCSTTTYCATAAAATTGGAACACAARGCMAACRYAGCTTCYCATYCTCMGTCCATTTCTGATTCTKCT
GCAGYGAYAY 8767: rs989968842 8770: rs1311826199 8798: rs921121557 8799:
rs953980582 8802: rs1253286968 8805: rs1337268615 8809: rs1434237699 8828:
rs187879482 8831: rs1195026184 8835: rs868622515 8836: rs912190429 8843:
rs1484205162 8847: rs1253009773 8851: rs1023520263 8868: rs1482415003 8875:
rs939700837 8878: rs1211692766 8880: rs1210970723
Bonobo ----AAC-AC-------------------------
ACATTTCCCCTTTTCATAAAATTGGAACACAAGGCAAACACAACTTCTCATCCTCAGTCCATTTCTGATTCTGCT
GCAGTGATAT
Chimpanzee ----AAC-AC-------------------------
ACATTTCCCCTTTTCATAAAATTGGAACACAAGGCAAACACAACTTCTCATCCTCAGTCCATTTCTGATTCTGCT
GCAGTGATAT
Gorilla ----AAC-AC-------------------------
ACATTTCCCCTTTTCATAAAATTGGGACACAAGGCAAACACAGCTTCTCATCCTCAGTCCATTTCTGATTCTGCT
GCAGTGATAT
Orangutan ----AAC-AC-------------------------
ACATTTCCCCTTTTCATAAAATTGGAACACAAGGCAAACACAGSTTCTCATTCTCAGTCCATTTCTGATCCTGCT
GCAGTGATAT 8839: rs170967286
Vervet-AGM ----AAC-AC-------------------------
ACATCTCCCCTTTTCATAAAATTGGAACACAAGACAAACATAGCTTCTTATCCTCGGTCCATTTCTGATCCTGTT
GCAGTGATTT
Crab-eating macaque ----AAC-AC-------------------------
ACATTTCCCCTTTTCATAAAATTGGAACACAAGACAAACATAGCTTCTTATCCTCGGTCCATTTCTGATCCTGTT
GCAGTGATTT
Macaque ----AAC-AC-------------------------
ACATTTCCCCTTTTCATAAAATTGGAACACAAGACAAACATAGCTTCTTATCCTRGGTCCATTTCTGATCCTGTT
GCAGTGATTT 8850: rs1071504737
Olive baboon ----AAC-AC-------------------------
ACATTTCCCCTTTTCATAAAATTGGAACACAAGACAAACATAGCTTCTTATCCTCGGTCCATTTCTGATCCTGTT
GCAGTGATTT
Gelada ----AAC-AC-------------------------
ACATTTCCCCTTTTCATAAAATTGGAACACAAGACAAACATAGCTTCTTATCCTCGGTCCATTTCTGATCCTGTT
GCAGTGATTT
Mouse Lemur ----AAC-
ACCTACACACATTCTTATCTTCACAATTTATTTCCCCTTTTCATAAAGCTGGAGTGCAGGACAAACACAGCTTCC
TACCCCGAGTCCATTTTAGACGTTACTGCAGTGACTT
Horse CCTTTACATC-------------------------TCATTTCCCCR-
TTCTTGAAATCAGAGGGC-AGAGAAACA-TCCTTTTTATCCTCAGTGCATTTCGAGCTTTGCTGCAGTGACTC
8806: rs395526980
Cat TYTTTACATC-------------------------
CCATTTCCCCTTCTCATGAAATCCGAGAGC-AGTGAAACA-
TGCTTCTGATCCCCAGTCCATTGGGAATCTTGCTGCAGTGAT-T 8762: rs785920201
Canada lynx TCTTTACATC-------------------------
CCATTTCCCCTTCTCATGAAATCCGAGAGC-AGTGAAACA-
TGCTTCTGATCCCCAGTCCATTGGGAATCTTGCTGCAGTGAT-T
Leopard TCTTTACATC-------------------------
CCATTTCCCCTTCTCATGAAATCAGAGAGC-AGTGAAACA-
TGCTTCTGATCCCCAGTCCATTGGGAATCTTGCTGCAGTGAT-T

Human
AAAVTYRCTGGTTTTACTAACACYRCAGTWGGCACAAGGYCCTRTRKYTSYAGGCAGAGKYTAGGGGTRAAKRKG
BGAATGGKGGYRTD-------KWGASSAAAGCYGTG--------- 8884: rs952911748 8886:
rs1286449783 8887: rs1230155572 8904: rs150004931 8905: rs778500398 8910:
rs1194970009 8920: rs1292483263 8924: rs587611185 8926: rs1370974630 8927:
rs1403970005 8928: rs587665268 8930: rs919666152 8931: rs931089076 8940:
rs1452512447 8941: rs961468261 8949: rs2843018 8952: rs1473873308 8953:
rs1413105853 8954: rs1187328155 8956: rs922621775 8963: rs932529802 8966:
rs1485545559 8967: rs1266328570 8969: rs1210459600 8977: rs1272287235 8978:
rs1242411578 8981: rs1341887071 8982: rs764735220 8988: rs895350514
Bonobo
AAAGTCACTGGTCTTACTAACACTGCAGTTGGCACAAGGTCCTGTGGTTCTAGGCAGAGGCTAGGGGTAAAGGTG
GGAATGGTGGTGTA-------GAGAGGAAAGCTGTG---------
Chimpanzee
AAAGTCACTGGTTTTACTAACACTGCAGTTGGCACAAGGTCCTGTGGTTCTAGGCAGAGGCTAGGGGTAAAGGTG
GGAATGGTGGTGTA-------GAGAGGAAAGCTGTG---------
Gorilla
AAAGTCACTGGTTTTACTAACACTGCAGTTGGCACAAGGTCCTGTGGTTCTTGGCAGAGGCTAGGGGTAAAGGTG
GGAATGGTGGTGGA-------GAGAGGAAAGCTGTG---------
Orangutan
AAAGTCACTGGTTTTACTAACACTGCAGTTGGCACAAGGTCCTGAGGGTCTTGGCAGAGGCTAGGGGTAAAGGTG
GGAATGGTGGTGGA-------GAGAGGAAAGCTGTG---------
Vervet-AGM
AAAGTCACAGGTTTTATTTACACTGCAATTGGCACAGGGTACTGAGGGTCTTGGCAGAGGCTAGGGGTAAAGGTT
GGAATGGTGGTGGA-------GAGAGGAGAGCTGTG---------
Crab-eating macaque
AAAGTCACTGGTTTTATTAACACTGCAGTTGGCGCAGGGTACTGAGGGTCTTGGCAGAGGCTAGGGGTAAAGTTT
GGAATGGTGGTGGA-------GAGAGGAGAGCTGTG---------
Macaque
AAAYTCACTGGTTTTATTAACACTGCAGTTGGCYCAGGGTKCTGAGGGTCTTGGCAGAGGKTAGGGGTAAAGTTT
GGAATGGTGGTGGA-------GAGAGGAGAGCTGTG--------- 8884: rs1084073489 8914:
rs309296436 8921: rs289167688 8941: rs300605462
Olive baboon
AAAGTCACTGGTTTTATTAACACTGCAGTTGGCGCAGGGTACTGAGGGTCTTGGCAGAGGCTAGGGGTAAAGTTT
GGAATGGTGATGGA-------GAGAGGAGAGCTGTG---------
Gelada
AAAGTCACTGGTTTTATTAACACTGCAGTTGGCGCAGGGTACTGAGGGTCTTGGCAGAGGCTAGGGGTGAAGTTT
GGAATGGTGGTGGA-------GAGAGGAGAGCTGTG---------
Mouse Lemur AAA-
GCACTGCTGCTGCCAACCCTGTGGTTGGCGCAAAAGCCTGAGGGTCTTGGCAGAGCCAAGAGGTCAAGGTGGGAA
CGGCGGTGGA--------------GAGCTGTG---------
Horse
GGAACAGTTYGTTATACTAACTCTGCAGTTGGCACAGAATCCTGAAGGTCTTGGCTGGGACTGGGGGTCAAGATG
CGAAAGGTGGTGGAYAGGGGA-------ATGCTGTG--------- 8890: rs1151272579 8970:
rs1148555586
Cat
GAGGCAGCGGGTGTGACTAACCCTGCAGTTGGCACAGAATGCTGTGGGTCTTGGCAGGAGCTCAGGGTAAAGGTG
GAAACAGTGGTGGAGAAGAGA-------ATGATGGG---------
Canada lynx
GAGGCAGCGGGTGTGACTAACACTGCAGTTGGCACAGAATGCTGTGGGTCTTGGCAGGAGCTCAGGGTAAAGGTG
GAAACAGTGGTGGAGAAGAGA-------ATGATGGG---------
Leopard
GAGGCAGCGGGTGTGACTAACATTGCAGTTGGCACAGAATGCTGTGGGTCTTGGCAGGAGCTCAGGGTAAAGGTG
GAAACAGTGGTGGAGAAGAGA-------ATGATGGGGCGGGGGGG

Human ----D-
CCTGGTACTGATAYTTCTAYYGSTTCATGMAGSTGGMAGWGTAAAAGYKGCCAYYG---
CTCACAAACRCASCRTRTGTYASAKGTTWRGVCTCKTSTCACKCTRCARCTGRAR 9005: rs985400338
9008: rs753079822 9020: rs767309190 9026: rs752254722 9027: rs1390087381
9029: rs587599683 9036: rs776185792 9039: rs1456773678 9043: rs1042274873
9046: rs902247352 9054: rs1449116308 9055: rs902487041 9060: rs1324916239
9061: rs191647650 9075: rs999947682 9078: rs1465280206 9080: rs1266666226
9081: rs939102306 9082: rs1293707251 9086: rs1265830051 9088: rs1032372513
9090: rs779900752 9094: rs1272468648 9095: rs1435262484 9097: rs112315124
9101: rs587724075 9103: rs1028126606 9108: rs1393266422 9111: rs1013546890
9114: rs954016523 9118: rs184236751 9120: rs1187786070
Bonobo ----G-
CCTGGTACTGATATTTCTACTGCTTCATGCAGCTGGCAGAGTAAAAGTTGCCATTG---
CTCACAAACACAGCATGTGTCAGAGGTTTGGGCTCTTCTCACTCTACAGCTGAAA
Chimpanzee ----G-
CCTGGTACTGATATTTCTACTGCTTCATGCAGCTGGCAGAGTAAAAGTTGCCATTG---
CTCACAAACACAGCATGTGTCAGAGGTTTGGGCTCTTCTCACTCTACAGCTGAAA
Gorilla ----G-
CCTGGTACTGATATTTCTACTGCTTCATGCAGCTGGCAGAGTAAAAGTTGCCATTG---
CTCACAAACACAGCATGTGTCAGAGGTTTGGGCTCTTCTCACTCTACAGCTGAAA
Orangutan ----G-
CCTGGTACTGATATTTCTACTGCTTCGTGCAGCTGGTGGAGTAAAAGTTGCCATTG---
CTCACAAACACAGCATGTGTCAGAGGTTTGGGCTCTTCTCACTTCACAGCTGAAA
Vervet-AGM ----
GCCCTGGTACTGATACTTCTACTGCTTCGTGCAGTTGGTGGAGTAAAAGATGCCATTG---
CTCACAAACACAGCATGTGTCAGAGGTTTGGGCTCTTCTCATTCTACAGCTGAAA
Crab-eating macaque ----
GCCCTGGTACTGATATTTCTACTGCTTCATGCAGTTGGTGGAGTAAAAGATGCCATTG---
CTCACAAACACAGCATGTGTCAGAGGTTTGGGCTCTTCTCATTCTACAGCTGAAA
Macaque ----
GCCCTGGTACTGATAWTTCTACTGCTTCATGCAGTTGGTGGAGTAAAAGATGCCATTG---
CTCACAAACACAGCATGTGTCAGAGGTTTGGGCTCTTCTCATTCTACAGCTGAAA 9020: rs309965122
Olive baboon ----
GCCCTGGTACTGATATTTCTACTGCTTCATGCAGTTGGTGGAGTAAAAGATGCCATTG---
CTCACAAACACAGCATGTGTCAGAGGTTTGGGCTCTTCTCATTCTACAGCTGAAA
Gelada ----
GCCCTGGTACTGATATTTCTACTGCTTCATGCAGTTGGTGGAGTAAAAGATGCCATTG---
CTCACAAACACAGCATGTGTCAGAGGTTTAGGTTCTTCTCATTCTACAGCTGAAA
Mouse Lemur G---
GCCCCGGTGCTGATATTTCTACTGCTTTGCGCATCTGGCAGAGTAAAAGGTGCTGTTG---
TTCATAAACACAGCATGCGTCAGAGGTTTGGGATCCTCTAATTCTACAGCCGAAA
Horse G---
GCCCTGGTGCTGATATTTCCACTGCTTTGTGCAGCTAGGGGAGTAAGAGATGTCA------TTTACA--
AATAGCAGGTGTCAGAGGTTCGGGATCCTGGAATTCTGCAGCTGAAA
Cat GGG-
TCCCTGGTACTGATATTTCCACTGCTTTGTGCAGCTGGGGGAGTGAAAGATGTCA---TCATCTGTG--
AACAACAGGTATCAGAGGTTCAGGATCCCGGAGCTCTGCAGCTG--A
Canada lynx GGG-
TCCCTGGTACTGATATTTCCACTGCTTTGTGCAGCTGGGGGAGTGAAAGATGTCA---TCATCTGTG--
AACAACAGGTATCAGAGGTTCGGGATCCCGGAGCTCTGCAGCTG--A
Leopard
GGGTCCCCTGGTACTGATATTTCCACTGCTTTGTGCAGCTGGGGGAGTGAAAGATGTCA------TCTGTG--
AACAACAGGTATCAGAGGTTCGGGATCCCGGAGCTCTGCAGCTG--A

Human GGG---ATTRTYWRTTTAKA-GATGAGGTAACTGASAYCCT-
TYAAAKTTAACTTGCTTGTBTA-----
AGKCTGCTGYGCACAAGMCTWGCCRAATTTTGAGYSGGATTCTRGTGAGTT 9130: rs888729621 9132:
rs1170558795 9133: rs587653419 9134: rs1476386635 9139: rs961348168 9153:
rs1015737161 9156: rs1196596329 9158: rs972355035 9164: rs1267755370 9168:
rs1417788009 9182: rs762679030 9192: rs1276420517 9199: rs1454703739 9207:
rs1557996040 9210: rs1290745375 9214: rs931059329 9224: rs587762130 9225:
rs587633471 9233: rs1029580758
Bonobo GGG---ATTGTCTGTTTAGA-GATGAGGTAACTGAGACCCT-
TTAAAGTTAACTTGCTTGTCTA-----
AGGCTGCTGTGCACAAGCCTTGCCAAATTTTGAGTGGGATTCTAGTGAGTT
Chimpanzee GGG---ATTGTCTGTTTAGA-GATGAGGTAACTGAGACCCT-
TTAAAGTTAACTTGCTTGTCTA-----
AGGCTGCTGTGCACAAGCCTTGCCAAATTTTGAGTGGGATTCTAGTGAGTT
Gorilla GGG---ATTGTCTGTTTAGA-GATGAGGTAACTGAGACCCT-
TTAAAGTTAACTTGCTTGTCTAAGGTAAGGCTGCTGTGCACAAGCCTTGCCACATTTTGAGTGGGATTCTAGTGA
GTT
Orangutan GGG---ATTGTCTGTTTAGA-GATGAGGTAACTGAGACCCT-
GTAAAGTTAACTTGCTTGTCTA-----
AGGCTGCTGTGCACAAGCCTTGCCAAATTTTGAGTGGGATTCTAGTGAGTT
Vervet-AGM GGG---ATTGTCTGTTTAGA-GGTGAGGTAACTGAGACCCT-
GTAAAGTTAACTTGCTTGTCTA-----
AGGCTGCTGTGCACAAGACTTGCCAAATTTTGAGTGGAATTCTAGTGAGTT
Crab-eating macaque GGG---ATTGTCTGTTTAGA-AGTGAGCTAACTGAGACCCT-
GTAAAGTTAACTTGCTTGTCTA-----
AGGCTGCTGTGCACAAGCCTTACTAAATTTTGAGTGAGATTCTAGTGAGTT
Macaque GGG---ATTGTCTGTTTAGA-AGTGAGCTAACTYAGACCCT-
GTAAAYTTAACTTGCTTGTCTA-----
AGGCTGCTYTGCKCAAGCCTTACRAAATTTTGAGTGYGATTCTAGTGAGTT 9154: rs292104457 9168:
rs303113400 9198: rs282726805 9202: rs1080279627 9213: rs294281942 9226:
rs301977667
Olive baboon GGG---ATTGTCTGTTTAGA-AGTGAGCTAACTGAGACCCT-
GTAAAGTTAACTTGCTTGTCTA-----
AGGCTGCTGTGCACAAGCCTTACCAAATTTTGAGTGGCATTCTAGTGAGTT
Gelada GGG---ATTGTCTGTTTAGA-GGTGAGCTAACTGAGACCCT-
GTAAAGTTAACTTGCTTGTCTA-----
AGGCTGCTGTGCACAAGCCTTGCCAAATTTTGAGTGGGATTCTAGTGAGTT
Mouse Lemur GGGACTATTATCCATTTACA-
GACCAGGTAACTGGGACCCTTGGGAAATTAAGTTGTTTGTCTA-----TGG---
CTGTGCACAAGCCTTGGCAACTTATGACTAGGATTCT---AAGTT
Horse GGG---
GCTGTCTGTTTAAAGGATGAGATAACTGAGACCCT----------------------------------------
---------------------------------------
Cat GGG---ACCACCTGTTTAGA-
GAGAAGGTAACTGAGACCCT-------------------------------------------------------
------------------------
Canada lynx GGG---ACCACCTGTTTAGA-
GAGAAGGTAGCTGAGACCCT-------------------------------------------------------
------------------------
Leopard GGG---ACCACCTGTTTAGA-
GAGAAGGTAGCTGAGACCCT-------------------------------------------------------
------------------------
Human
TTCHCCAATAG----------------------------------------------------------------
------------------CAGDGAAAA--RCKMTCYKTTABYMRT 9244: rs949600556 9337:
rs1475400311 9339: rs748756327 9345: rs774427224 9347: rs1369098415 9348:
rs1310023436 9350: rs1430666793 9351: rs746005433 9352: rs772329271 9356:
rs1393310106 9357: rs369598840 9358: rs761075415 9359: rs768923037
Bonobo
TTCCCCAGTAG----------------------------------------------------------------
------------------CAGGGAAAA--ACTATCTTTTACTAGT
Chimpanzee
TTCCCCAGTAG----------------------------------------------------------------
------------------CAGGGAAAA--ACTATCTTTTACTAGT
Gorilla
TTCCCCAATAG----------------------------------------------------------------
------------------CAGGGAAAA--ACTATCTTTTACTAGT
Orangutan
TTCCCCAAAAG----------------------------------------------------------------
------------------CAGGGAAAA--ACTATCTTTTACTAGT
Vervet-AGM
TTCCCCAAGAG----------------------------------------------------------------
------------------CAAGCCGTC--TGTCTCTTTTACTAGT
Crab-eating macaque
TTCCCCAAGAG----------------------------------------------------------------
------------------CAGGCCCTC--TGTCTCTTTTACTAGT
Macaque
TTCCCCYAGAG----------------------------------------------------------------
------------------CAGGCCCTC--TGTCTCTTTTACTAGT 9247: rs283573029
Olive baboon
TTCCCCAAGAG----------------------------------------------------------------
------------------CAGGCCCTC--TGTCTCTTTTACTAGT
Gelada
TTCCCCAAGAG----------------------------------------------------------------
------------------CAGGCCCTC--TGTCTCTTTTACTAGT
Mouse Lemur
TTTCCCAGTGG----------------------------------------------------------------
------------------CAGGGCTTCTGACTGTCTTTTACTGGC
Horse
---------------------------------------------------------------------------
------------------GAGGCCCCCTGCCTATCTTTTACTGGT
Cat -----------A-
AGGGGTTAACTTGCCTATCTAAGGCTGTGCACAAGCCTTGCCCACTTTTCACTGGGATTCTACCGAGCTTTTCCT
CAAGGCAGGCCCTCTGCCCATCTTTTACTGGT
Canada lynx -----------A-
AGGGGTTAACTTGCCTATCCAAGGCTGTGCACAAGCCTTGCCCGCTTTTCACTGGGATTCTACCGAGCTTTTCCT
CAAGGCAGGCCCTCTGCCCATCTTTTACTGGT
Leopard -----------
AAAGGGGTTAACTTGCCTATCTAAGGCTGTGCACAGGCCTTGCCCACTTTTCACTGGGATTCTACCAAGCTTTTC
CTCAAGGCAGGCCCTCTGCCCATCTTTTACTGGT

Human TABRRGSTGYTTCTSA---------------------------
GAA---------------------------
AGWGACTCASNTTTGGWGKRYTDYTGVGAGYAGGYRWGYRGSKRTRA 9363: rs777159343 9364:
rs587776031 9365: rs371814855 9367: rs1181188494 9370: rs1219350976 9375:
rs1272582026 9436: rs1557996077 9443: rs587616803 9444: rs751101083 9450:
rs759183803 9452: rs767168451 9453: rs199651321 9454: rs755897068 9456:
rs1233603916 9457: rs1244351356 9460: rs202069145 9464: rs1170811310 9468:
rs757169217 9469: rs376238143 9470: rs763901461 9472: rs893820165 9473:
rs745916413 9475: rs144744634 9476: rs780272061 9477: rs369221781 9479:
rs769000173
Bonobo TACAAGGTGCTTCTCA---------------------------
GAA---------------------------
AGTGACTCACCTTTGGTGGGCTACTGGGAGCAGGCGAGCAGGGGTGA
Chimpanzee TACAAGGTGCTTCTCA---------------------------
GAA---------------------------
AGTGACTCACCTTTGGTGGGCTACTGGGAGCAGGCGAGCAGGGGTGA
Gorilla TACAAGGTGCTTCTCA---------------------------
GAA---------------------------
AGTGACTCACCTTTGGTGGGCTACTGGGAGCAGGCGAGCAGGTGTGA
Orangutan TACAAGGTGCTTCTCA---------------------------
AAA---------------------------
AGTGACTCACCTTTGGTGGGCTACTGGGAGCAGGCGAGCAGGTGTGA
Vervet-AGM TACAAGATGCTTATCA---------------------------
AAA---------------------------
AGTGACTCACGTTTGGTGGGCTGCTGGGAGCAGGCGAGCAGGTGTGA
Crab-eating macaque TACAAGATGCTTATCA---------------------------
AAA---------------------------
AGTGACTCACGTTTGGTGGGTTGCTGGGAGCAGACGAGCAGGTGTGA
Macaque TACAAGATGCTRATCA---------------------------
AAA---------------------------
AGTGACTCACYTTTGGTGGGRTGCTGGGAGCAGYCGAGCAGGWGTGA 9372: rs293431978 9444:
rs308394189 9454: rs284410988 9467: rs294094644 9476: rs304812851
Olive baboon TACAAGATGCTTATCA---------------------------
AAA---------------------------
AGTGACTCACGTTTGGTGGGCTGCTGGGAGCAGGCGAGCAGGTGTGA
Gelada TACAAGATGCTTATCA---------------------------
AAA---------------------------
AGTGACTCACGTTTGGTGGGCTGCTGGGAGCAGGCGAGCAGGTGTGA
Mouse Lemur
TCCAAGATGCTCCTCAAAGAGTGATCTGTGCAGACCCCTGGAACAA---------------------------
CCGGACTCACCTTTGGTGGGCAGCTGGGAGCAGGCGAGCAAGTGTGA
Horse TCCYTGGCTTTTCTCA---------------------------
AAGAGTAACCTGTACAGTCCCTGAGATCAATGTGACTCACCTTTGGTGGGCTGCTGGAAGAAGGCGAGCAGGCYT
GA 9364: rs1137386743 9477: rs1150655770
Cat ACCACGACCCTTCTCA---------------------------
AAGAGTGGCCTGCACAGTCCCTGGGAACAATGTGACTCACCTTTGGTGGGCTCCTGGGAGAAGGCTAGCAGGTGA
GA
Canada lynx ACCACGACCCTTCTCA---------------------------
AAGAGTGGCCTGCACAGTCCCTGGGAACAATGTGACTCACCTTTGGTGGGCTCCTGGGAGAAGGCTAGCAGGTGA
GA
Leopard ACCACGACCCTTCTCA---------------------------
AAGAGTGGTCTGCACAGTCCCTGGGAACAATGTGACTCACCTTTGGTGGGCTCCTGGGAGAAGGCTGGCAGGTGA
GA

Human
GGGARGTTTBCTGBACYDCTBTTSWCAGYTGCDGAATRYDYYTCRCBGSARTCAACAGAYVYTGCDTCTSCRGAG
RARCAAGCRGRAACCMAGCAGTTCAGAMACSMARNRGAAACCTTR 9485: rs777148971 9490:
rs1332746126 9494: rs1557996139 9495: rs1557996143 9497: rs762327005 9498:
rs587712415 9501: rs773898985 9504: rs1008466802 9505: rs1286736541 9509:
rs759067886 9513: rs939049952 9518: rs1256262455 9519: rs766960590 9520:
rs373202578 9521: rs757188613 9522: rs144004292 9525: rs1452551580 9527:
rs368678169 9529: rs757083410 9531: rs1189194662 9540: rs72695184 9541:
rs750380692 9542: rs1353408775 9546: rs758462859 9550: rs780003924 9552:
rs952382288 9556: rs1335432862 9558: rs2289459 9564: rs1262919647 9566:
rs1327746517 9571: rs1354847741 9583: rs768747562 9586: rs1278829085 9587:
rs1486911909 9589: rs781631836 9590: rs748496437 9591: rs375748805 9600:
rs1557996242
Bonobo
GGGAGGTTTCCTGCACCGCTCTTGTCAGTTGCAGAATGCGCTTCACTGGAGTCAACAGACGCTGCATCTCCAGAG
GAGCAAGCAGAAACCCAGCAGTTCAGAAACCCAGCAGAAACCTTG
Chimpanzee
GGGAGGTTTCCTGCACCGCTCTTGTCAGTTGCAGAATGCGCTTCACTGGAGTCAACAGACGCTGCATCTCCAGAG
GAGCAAGCAGAAACCCAGCAGTTCAGAAACCCAGCAGAAACCTTG
Gorilla
GGGAGGTTTCCTGCATCCCTCTTGTCAGTTGCAGAATGCGCTTCACTGGAGTCAACAGACGCTGCATCTCCAGAG
GAGCAAGCAGAAACCCAGCAGTTCAGAAACCCAGCAGAAACCTTG
Orangutan
GGGAGGTTTCCTGCATCACTCTTGTCAGTTGCAGAATGCGCTTCACTGGAGTCAACAGACGCTGCATCTCCAGAG
MAGCAAACAGAAACCCAGCAGTTCAGAAACCCAGCAGAAACCTTG 9556: rs170967285
Vervet-AGM
GGGAGGCTTCCTGCATCACTCTTGTCAGTTGCAGAATGTGCTTCACTGGAGTCAACAGACGCTGCATCTCCAAAG
GAGCAAGCAGAAAGCCAGCAGTTCAC-----------AGACCTTG
Crab-eating macaque
GGGAGGCTTCCTGCATCACTCTTGTCAATTGCAGAATGTGCTTCACTGGAGTCAACAGACGCTGCATCTCCAAAG
GAGCAAGCAGAAAGCCAGCAGCTCAC-----------AGACCTTG
Macaque
GGGAGGRTTCCTGCATCACTCTTGTCAYTTGCAGAATGTGCTTCACTGGAGTCAACAGACGCTGCATCTCCAAAG
GAGCAAGCAGAAAGCCAGCAGCTCAC-----------AGACCTTG 9487: rs288501848 9508:
rs300631996
Olive baboon
GGGAGGCTTCCTGCATCACTCTTGTCAGTTGCAGAATGTGCTTCACTGGAGTCAACAGACGCTGCATCTCCAAAG
GAGCAAGCAGAAAGCCAGCAGCTCAC-----------AGACCTTG
Gelada
GGGAGGCTTCCTGCATCACTCTTGTCAGTTGCAGAATGTGCTTCACTGGAGTCAACAGACGCTGCATCTCCAAAG
GAGCAAGCAGAAAGCCAGCAGCTCAC-----------AGACCTTG
Mouse Lemur
GGCAAGGCTCCTGCGTTGCTCTTTGCAGCCGCAGGGCCTGCTTCAGTGGCGTCAACAGCCGCTGCATTTCCGGAG
GAGCGAGCGGAGA-GCAGCACTTCAC-----------A-GCCTTT
Horse
GTGGAGCTTCCTGCATCACTCTTTTCACTTGCAAGACCCGCTTCACTGGAGTCAACAGCCGCTGCATTTTCAGAG
GAGCAAGCAGAAAGCCAGCAGTTCAC-----------AGTCTTTG
Cat
GCGAGGCTTCCTGCATTGCTTTCTTCACTTGCAAGACCCGCTTCACTGAAGTCAACAGCCGTTGCATTTCCAGAG
AAATAAGCAGAAAGCCAGCAATTCAC-----------AGTCCTTG
Canada lynx
GCGAGGCTTCCTGCATTGCTTTCTTCACTTGCAAGACCCGCTTCACTGAAGTCAACAGCCGTTGCATTTCCAGAG
AAATAAGCAGAAAGCCAGCAATTCAC-----------AGTCCTGG
Leopard
GGGAGGGTTCCTGCATTGCTTTCTTCACTTGCAAGACCCGTTTCACTGAAGTCAACAGCCGTTGCATTTCCAGAG
AAATAAGCAGAAAGCCAGCGATTCAC-----------AGTCCTTG

Human AAAGAGRTGCCCAGHKGTGYCC--------------
RRCAGRACTTTWTAARGCCCYAAGACTYCTGYCTCCCTAAGCYCYRCCTSTGCYCACCRTGGCTYMGTCTGYTTC
TRAAACTGG 9607: rs1378718468 9615: rs587720678 9616: rs1453141244 9620:
rs1450484694 9637: rs587596327 9638: rs145228152 9642: rs1377517627 9648:
rs1413093676 9650: rs1455549521 9650: rs1312073464 9652: rs1159621158
9657: rs1005774128 9664: rs1037131070 9668: rs1411372431 9679: rs1557996283
9681: rs587704623 9682: rs897334226 9686: rs1246840825 9690: rs1186175349
9695: rs1463921796 9701: rs587602068 9702: rs924171919 9708: rs1321441320
9713: rs780362835
Bonobo AAAGAGATGCCCAGTGGTGCCC--------------
AGCAGGACTTTATAAAGCCCCAAGACTCCTGCCTCCCTAAGCCCCGCCTCTGCTCACCGTGGCTCAGTCTGCTTC
TAAAACTGG
Chimpanzee AAAGAGATGCCCAGTGGTGCCC--------------
AGCAGGACTTTATAAAGCCCCAAGACTCCTGCCTCCCTAAGCCCCGCCTCTGCTCACCGTGGCTCAGTCTGCTTC
TAAAACTGG
Gorilla AAAGAGATGCCCAGTGGTGCCC--------------
AGCAGGACTTTATAAAGCCCCAAGACTCCTGCCTCCCTAAGCCCCGCCTCTGCTCACCGTGGCTCAGTCTGCTTC
TAAAATTGG
Orangutan AAAGAGATGCCCAGTGGTGCCC--------------
AGCAGGGCTTTATAAAYCCCCAAGACTCCTGCCTCCCTAAGCCCCGCCTCTGCTCACCGRGGCTCAGTCTGCTTC
TAAAACTGG 9653: rs170967284 9696: rs170967283
Vervet-AGM AAAGAGATGCCCAGCGGTGCCC--------------
AACAGGGCTTTATAAAGCCCCAGGACTCCTGCCTCCTTAAGCCCCGCCTCTGCTCACCGTGGCTCAGTCTGCTTC
TAAAACTGG
Crab-eating macaque AAAGAGATGCCCAGCGGTGCCC--------------
AACAGGGCTTTATAAAGCCCCAGGACTCCTGCCTCCTTAAGCCCCGCCTCTGCTCACCGTGGCTCAGTCTGCTTC
TAAAACTGG
Macaque AAAGAGATGCCCAGRGGTGCCC--------------
AACAGGGCTTTATAAAGCCCCAGGACTCCTGCCTCCTTAAYCCCCGCCTCTGCTCACCGTSGCTCAGTCTGCRTC
TAAAACTGG 9615: rs1072829846 9677: rs1081062069 9697: rs304383257 9709:
rs286078449
Olive baboon AAAGAGATGCCCAGCGGTGCCC--------------
AACAGGGCTTTATAAAGCCCCAGGACTCCTGCCTCCTTAAGCCCCGCCTCTGCTCACCGTGGCTCAGTCTGCTTC
TAAAACTGG
Gelada AAAGAGATGCCCAGCAGTGCCC--------------
AACAGGGCTTTATAAAGCCCCAGGACTCCTGCCTCCTTAAGCCCCGCCTCTGCTCACCGTGGCTCAGTCTGCTTC
TAAAACTGG
Mouse Lemur
GGGGAGATGCCCAGCGGAGCCTGGAGCCCAGGGTTGGGCTGCGCTTTATAGATCCCTGAGACTCCCGCCTCTGGA
AGCCCCGCCCCTGCCCAGCCCCGCTCCGTCTGCTTCTAAAACTAG
Horse GGAGAGATGCCCCGCGGTGCCC--------------
AGTTGGGCTTTATAGAGCCCTGAGACTCCTGCCT-
CGGAAGACCCACCCCTGCTTATCAGGGCTCAGTTGGCTTCTAAAACTGG
Cat GGAGAGTTACCCAGAGGTGCCC--------------
CATTAGGCTTTATAGAACTCTGAGATTCCTGCCTCTGGAAGCCCCACCCCTGCTTATCAAGGCTCATTTGGCTTC
TAAAACTAG
Canada lynx GGAGAGTTACCCAGAGGTGCCC--------------
CATTAGGCTTTATAGAACTCTGAGATTCCTGCCTCTGGAAGCCCCACCCCTGCTTATCAAGGCTCATTTGGCTTC
TAAAACTGG
Leopard GGAGAGTTACCCAGAGGTGCCC--------------
CATTAGGCTTTATAGAACTCTGAGATTCCTGCCTCTGGAAGCCCCACCCCTGCTTATCAAGGCTCATTTGGCTTC
TAAAACTGG

Human GTSAAAGGGCTCAC----
TCAGAAYAYRRGCRARYCAAAGRCAAACAGCATYTCTCCAACAKGTRCAYAGCTSCC-----
CTGCTCCTSRGCRTGTGTGGGRATGGCTGGRCATYGTT-- 9723: rs1281758261 9745:
rs1345339061 9747: rs587678673 9748: rs775303107 9749: rs1433073454 9752:
rs587760242 9754: rs1255825090 9755: rs1050479027 9761: rs1435700400 9772:
rs1347858940 9782: rs587631539 9785: rs978012134 9788: rs587688958 9793:
rs1179532354 9809: rs1166173066 9810: rs1249017934 9813: rs923729927 9822:
rs1187567597 9831: rs1488458787 9835: rs1245315437
Bonobo GTCAAAGGGCTCAC----
TCAGAACATGGGCGAGTCAAAGACAAACAGCATCTCTCCAACATGTACATAGCTGCC-----
CTGCTCCTGAGCATGTGTGGGAATGGCTGGGCATGGTT--
Chimpanzee GTCAAAGGGCTCAC----
TCAGAACATGGGCGAGTCAAAGACAAACAGCATCTCTCCAACATGTACATAGCTGCC-----
CTGCTCCTGAGCATGTGTGGGAATGGCTGGGCACGGTT--
Gorilla GTCAAAGGGCTCAC----
TCAGAACATGGGCGAGTCAAAGACAAACAGCATCTCTCCAACATGTACATAGCTGCC-----
CTGTTCCTGAGCATGTGTGGGAATGGCTGGGCATGGTT--
Orangutan GTCAAAGGGCTCAC----
TCAGAACATGGGTGAGTCAAAGACAAACAGCATCTCTCCAACYTGCACATAGCTGCC-----
CTGCTCCTGAGCATGTGTGGGAATGGCTGGGCGTGGTT-- 9781: rs170967282
Vervet-AGM GCCAAAGGGCTCAC----
TCAGAACATGGGCGAGTCAAAGACAAACAGCATCTCTCCAACATGTACATAGCTGCC-----
TTGCTCTTGAGCATGTGTGGGAATGGCTGGGCGTGGTT--
Crab-eating macaque GCCAAAGGGCTCAC----
TCAGAACATGGGCGAGTCAAAGACAAACAGCATCTCTCCAACATGTACATAGCTGCC-----
CTGCTCTTGAGCATGTGTGGGAATGGCTGGGCGTGGTT--
Macaque GCCAAAGGGCTCAC----
TCAGAACATGGGCGAGTCAAAGACAAACAGCATCTCTCCAACATGTACARAGRTGCC-----
CTGCTCTTGAGCATGTGTGGGAATGGCTGGYCGTGGTT-- 9788: rs1074275780 9791:
rs300444365 9831: rs195924489
Olive baboon GCCAAAGGGCTCAC----
TCAGAACATGGGCGAGTCAAAGACAAACAGCATCTCTCCAACATGTACATAGCTGCC-----
CTGCTCTTGAGCCTGTGTGGGAATGGCTGGGCGTGGTT--
Gelada GCCAAAGGGCTCAC----
TCAGAACATGGGCGAGTCAAAGACAAACAGCATCTCTCCAACATGTACATAGCTGCG-----
CTGCTCTTGAGCATGTGTGGGAATGGCTGGGCGTGGTT--
Mouse Lemur GCCAAAGGGCTCAC----
GCAGAACACGGCCAAGTCACACACACACCTCATCTCTCCAACATGTAAATACCCGCC----------CC-
TGGCATGTATGGGAATGGCCGG-CCTGACT--
Horse TCCAAAGGTCTCGT----
TCAGAACACGAGTGAGTCAAAGAAAAACATCTTCCCTCCAATGTGTACATAGCTGCCCTGCT-----
CCTGYGGATGTGTGGGCATCGATGGCTCTG----- 9810: rs1146254115
Cat GCCAAAGTTC----
TCACTCAGAACACGGGGGAGTCGAAGACAAACATCATCTCTCCAACTTGTATGTAGCTGCCCTGAG-----
CCTGGGCATGTGTGGGGGTGGATGGCTCTG---AT
Canada lynx GCCAAAGTTC----
TCACTCAGAACATGGGGGAGTCGAAGACAAACATCATCTCTCCAACTTGTATGTAGCTGCCCTGAG-----
ACTGGGCATGTGTGGGGGTGGATGGCTCTG---AT
Leopard GCCAAAGTTC--------
TCAGAACATGGGCGAGTCGAAGACAAACATCATCTCTCCAACTTGTATGTAGCTGCCCTGAG-----
CCTGGGCATGTGTGGGGGTGGATGGCTCTG---AT

Human -CYT---YCTAYTCCATCAGGCTC-TGTK-------------
GCAGSCTTGATTCTGCCCAGCTAYYTARGCA-
GGARRWTATGRTGTTCCTTGTTRTAKCACATCCCARGGTAAYCCTA 9843: rs960525535 9848:
rs1490571376 9852: rs1009023965 9869: rs1041271079 9887: rs587767998 9906:
rs1296422805 9907: rs1218539346 9910: rs1365462556 9918: rs1295053629 9919:
rs947817620 9920: rs1194346081 9925: rs1305737324 9937: rs994003815 9940:
rs1048698690 9950: rs1433145198 9956: rs1433092019
Bonobo -CCT---CCTACTCCATCAGGCTC-TGTG-------------
GCAGCCTTGATTCTGCCCAGCTGTCTAAGCA-
GGAGGTTATGATGTTCCTTGTTGTATCACATCCCAAGGTAACCCTA
Chimpanzee -CCT---CCTACTCCATCAGGCTC-TGTG-------------
GCAGCCTTGATTCTGCCCAGCTATCTAAGCA-
GGAGGTTATGATGTTCCTTGTTGTATCACATCCCAAGGTAACCCTA
Gorilla -CCT---CCTACTCCATCAGGCTC-TGTG-------------
GCAGCCTTGATTCTGCCCAGCCATCTAAGCA-
GGAGGTTATGATGTTCCTTGTTGTATCACATCCCAAGGTAACCCTA
Orangutan -CCT---CCTACTCCATCAGGCTC-TGTG-------------
GCAGCCTTGATTCTGCCCAGCCATCTAAGCA-
GGAGGTTATGATGTTCCTTGTTGTATCACATCCCAAGGTAACCCTA
Vervet-AGM -CCT---CCTACTCCATCAGGCTC-TGTG-------------
GCAGCCTTGTTTCTGCCCTGCCATCTAAGCAGGGAGGTTATGATGTTCCCTGTTGTATCACGTCCCAAGGTAATC
CTA
Crab-eating macaque -CCT---CCTACTCCATCAGGCTC-TGTG-------------
GCAGCCTTGTGTCTGCCCTGCCATCTAAGCAGGGAGGTTATGATGTTCCCTGTTGTATCACGTCCCAAGGTAATC
CTA
Macaque -CCT---CCTACTCCATCYGGCTC-TGTG-------------
GCAGCCTTGTGTCTGCCCTGCCATCTAAGCAGGGAGGTTATGATGTTCCCTGTTGTATCACGTCCCAAGGTAATC
CTA 9859: rs1077014999
Olive baboon -CCT---CCTACTCCATCAGGCTC-TGTG-------------
GCTGCCTTGTGTCTGCCCTGCCATCTAAGCAGGGAGGTTATGATGTTCCCTGTTGTATCACGTCCCAAGGTAATC
CTG
Gelada -CCT---CCTACTCCATCAGGCTC-TGTG-------------
GCAGCCTTGTGTCTGCCCTGCCATCTAAGCAGGGAGGTTATGATGTTCCCTGTTGTATCACGTCCCAAGGTAATC
CTA
Mouse Lemur -CCG------CCTCTCTCGGGCTCTCGCA-------------
GCAGCTTTATTTCCGCCCAGCCACCAAAGGG-
GAAGCTCAGAATGTTCCTCGTTGTAACACATCCCAGGGTAACCCCT
Horse -ACTCCT------TTC-------------
TCGAGCTCTTGTGGCAGCCTTCTTTATGCACAGCCCCC---TCA-
GGAGGCTATGATGTTCCTTGTTGTAACACACCCTGAGGTAACCCCA
Cat CCCTCCT------TTC--------------------------
TCAGCCTTATTTATAGCCAGCCACG---TCA-TGGGGCTGTGATGGTCCTTGC---
CGCACATCCTGAGGTAACACCA 9900: rs784920692
Canada lynx CCCTCCT------TTC--------------------------
TCAGCCTTATTTATAGCCAGCCACG---TCA-TGGGGCTGTGATGGTCCTTTC---
CGCACATCCTGAGGTAATACCA
Leopard CCCTCCT------TTC--------------------------
TCAGCCTTATTTATAGCCAGCCACT---TCA-TGGGGCTGTGATGGTCCTTGC---
CACACATCCTGAGGTAACACCA

Human
TGTGTCTYGTTTTAGAMCCYGGYTCCTYATCTGTATTAYTCTCACTRSGTRTTCCACAMTCCTYTCTRTGGKGTT
AGTTGTTATYATTTTAATGW--GCTATRCAKYATAAGAAACATCT 9968: rs1423754927 9977:
rs1175587735 9980: rs587621980 9983: rs587693565 9988: rs779385982 9999:
rs941580513 10007: rs1463316002 10008: rs1296175857 10011: rs1251940314
10019: rs1037245290 10024: rs1310359826 10028: rs1441494819 10032:
rs897448431 10045: rs1224067061 10055: rs952351341 10063: rs1286265150
10066: rs587733421 10067: rs587622946
Bonobo
TGTGTCTTGTTTTAGACCCTGGCTCCTTATCTGTATTACTCTCACTGGGTGTTCCACACTCCTCTCTGTGGTGTT
AGTTGTTATTATTTTAATGT--GCTATGCATTGTAAGAAACATCT
Chimpanzee
TGTGTCTTGTTTTAGACCCTGGCTCCTTATCTGTATTACTCTCACTGGGTGTTCCACACTCCTCTCTGTGGWGTT
AGTTGTTATTATTTTAATGT--GCTATGCATTGTAAGAAACATCT 10032: rs26681234
Gorilla
CGTGTCTTGTTTTAGACCCTGGCTCCTTATCTGTATTACTCTCACTGGGTGTTCCACACTCCTCTCTGTGGTGTT
AGTTGTTATTATTTTAATGT--GCTATGCATTATAAGAAACATCT
Orangutan
TGTGTCTTGTTTTAGACCCTGGCTCCTTATCGGTATTACTCTCACTGGGTGTTCCACACTCCTTTCTGCGGTGTT
AGTTGTTATTATTTTAATGT--GCTATGCATTATAAGAAACATCT
Vervet-AGM
TGTGGCTTGTTTTAGACCCTGGCTCCTTATCTGTATTACTCTCACTGGGTGTTCCACACTCCTCTCTGTGGTGTT
AGTTGTTATTATTTTAAAGT--GCTATGCATTATAAGAAACATCT
Crab-eating macaque
TGTGGCTTGTTTTAGACCCTGGCTCCTTATCTGTATTACTCTCACTGCGTGTTCCACACTCCTCTCTGTGGTGTT
AGTTGTTATTATTTTAAAGT--GCTATGCATTACAAGAAACATCT
Macaque
TGTGGCTTGTTTTAGACCCTGGCTCCTTATCTGTATTACTCTCACTGCGTGTTCCACACTCCTCTCTGTGGTGTT
AGTTGTTAWTATTTTYAAGT--GCTATGCATTACAAGAAACATCT 10044: rs286772227 10051:
rs299120854
Olive baboon
TGTGGCTTGTTTTAGACCCTGGCTCCTTATCTGTATTACTCTCACTGCGTGTTCCACACTCCTCTCTGTGGTGAT
AGTTGTTATTATTTTAAAGT--GCTATGCATTACAAGAAACATCT
Gelada
TGTGGCTTGTTTTAGACCCTGGCTCCTTATCTGTATTACTCTCACTGCGTGTTCCACACTCCTCTCTGTGGTGTT
AGTTGTTATTATTTTAAAGT--GCTATGCATTACAAGAAACATCT
Mouse Lemur
CCTGGCCTATCTTGGACCCTGGCCCCTCACTGGGGTTACTGTCATTGGGTGCTTCATAATCTGCCCCATGGTGTT
AGCTGTTATTATTTTAATGT----GATGCATTATAAGGAAACTCT
Horse
CCTGGCTTGTCTGGGGTCCTGGTTCCTCATCTGAGTTACTCTCCTTTGGTGGTCCAGAATGCTTTCTGTGGAGTT
AGCTGTTATTATTTTAGTGTAT--TATGCATAATAAGAAAAATCT
Cat
CCTAGCCTGTCTTGGACCCTGGCTTCTCATCTGAGCTATTCTTGCTTATTGTTCCAGAATGCTCTCTGTGGAGTT
AGCAGTTATTATTTTAATATGT--TATGCATAATGAGGGACATCT
Canada lynx CCTGGCCTGTCTTGGACCCTGGGTTCTCATCTGAGCTATTCTTGCT---
TATTCCAGAATGCTCTCTGTGGAGTTAGCAGT---TATTTTAATATGT--TATGCATAATGAGGGACATCT
Leopard
CCTGGCCTGTCTTGGACCCTGGCTTCTCAGCTGACCTATTCTTGCTTACTGTTCCAGAATGCTCTCTGTGGAGTT
AGCAGTTATTATTTTAATATGT--TATGCATAATAAGGGGCATCT

Human TTCTAAACCAAAGRG-A-A--
A--------------------------------------------------------------------------
------------------------ 10094: rs1233168689
Bonobo TTCTAGACCAAAGGG-A-A--
A--------------------------------------------------------------------------
------------------------
Chimpanzee TTCTAAACCAAAGGG-A-A--
A--------------------------------------------------------------------------
------------------------
Gorilla TTCTAAACCAAAGGG-A-A--
A--------------------------------------------------------------------------
------------------------
Orangutan TTCAAAARCAAAGGG-A-A--
A--------------------------------------------------------------------------
------------------------ 10088: rs170967281
Vervet-AGM TTCAAAACCAAAGGG-A-A--
A--------------------------------------------------------------------------
------------------------
Crab-eating macaque TTCAAAACCAAAGGG-A-A--
G--------------------------------------------------------------------------
------------------------
Macaque TTCAAAARCAAAGGG-A-A--
G--------------------------------------------------------------------------
------------------------ 10088: rs309123537
Olive baboon TTCAAAACCAAAGGG-A-A--
GCTCTTTTTTTTTTTTTTTTTGAGACGGAGTCTCACTGTGTCTCCCAGGCTGGAGTGCAGTGGCGCGATCTCGGC
TCACTGCAAGCTCCGCCCCCCGGG
Gelada TTCAAAACCAAAGGG-A-A--
G--------------------------------------------------------------------------
------------------------
Mouse Lemur TTCAAAACCAAAAGG-C-
ATGC-----------------------------------------------------------------------
---------------------------
Horse TTCAAAACCAAAAGGAATG--
A--------------------------------------------------------------------------
------------------------
Cat TTCAAAACCAAAAGG-ATG--
A--------------------------------------------------------------------------
------------------------
Canada lynx TTCAAAACCAAAAAG-ATG--
A--------------------------------------------------------------------------
------------------------
Leopard TTCAAAACCAAAAGG-ATG--
A--------------------------------------------------------------------------
------------------------

Human
---------------------------------------------------------------------------
---------------------------------------------
Bonobo
---------------------------------------------------------------------------
---------------------------------------------
Chimpanzee
---------------------------------------------------------------------------
---------------------------------------------
Gorilla
---------------------------------------------------------------------------
---------------------------------------------
Orangutan
---------------------------------------------------------------------------
---------------------------------------------
Vervet-AGM
---------------------------------------------------------------------------
---------------------------------------------
Crab-eating macaque
---------------------------------------------------------------------------
---------------------------------------------
Macaque
---------------------------------------------------------------------------
---------------------------------------------
Olive baboon
TTCACGCCATTCTCCCGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGCGCCCGCTACCGCGCCCGGCTAGTTTT
TTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTAGCCAGGATA
Gelada
---------------------------------------------------------------------------
---------------------------------------------
Mouse Lemur
---------------------------------------------------------------------------
---------------------------------------------
Horse
---------------------------------------------------------------------------
---------------------------------------------
Cat
---------------------------------------------------------------------------
---------------------------------------------
Canada lynx
---------------------------------------------------------------------------
---------------------------------------------
Leopard
---------------------------------------------------------------------------
---------------------------------------------

Human
---------------------------------------------------------------------------
--------------STCTT-----TTAATAGTAGCTT----TTCA 10410: rs1295848341
Bonobo
---------------------------------------------------------------------------
--------------CTCTT-----TTAATAGTAGCTT----TTCA
Chimpanzee
---------------------------------------------------------------------------
--------------CTCTT-----TTAATAGTAGCTT----TTCA
Gorilla
---------------------------------------------------------------------------
--------------CTCTT-----TTAATAGTAGCTT----TTCA
Orangutan
---------------------------------------------------------------------------
--------------CTCTT-----TTAATAGTAGCTT----TTCA
Vervet-AGM
---------------------------------------------------------------------------
--------------CTCTT-----TTAATAGTAGCTT----TTCA
Crab-eating macaque
---------------------------------------------------------------------------
--------------CTCTT-----TTAATAGTAGCTT----TTCA
Macaque
---------------------------------------------------------------------------
--------------CTCTT-----TTAATAGTAGCTT----TTCA
Olive baboon
GTCTCGATCTCCTGACCTTGTGATCCACCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCTTGAGCCACCGC
GCCCGGCCGGGAAGCTCTT-----TTAATAGTAGCTT----TTCA
Gelada
---------------------------------------------------------------------------
--------------CTCTT-----TTAATAGTAGCTT----TTCA
Mouse Lemur
---------------------------------------------------------------------------
--------------ATCTT-----TTAATAGT-CCTCTCCATCCC
Horse
---------------------------------------------------------------------------
--------------ATCTT-----TTATTA---------------
Cat
---------------------------------------------------------------------------
-------------------ATGTTCTAATA---------------
Canada lynx
---------------------------------------------------------------------------
-------------------ATGTTCTAATA---------------
Leopard
---------------------------------------------------------------------------
------------------------ATAATA---------------

Human A-----------GGAGTTGGGRGTGAGTGTTGKCACATARKCCAAGGR-
YTRGGYRT-TARAKTAYGTRGAACBTAYTAYATTTCTCCY--GTTTR-KTGTCC--AC--HCKTTYACTTG
10462: rs1396832217 10473: rs1301739559 10480: rs755184616 10481:
rs1360401569 10488: rs1179149992 10490: rs1470606038 10492: rs1411646722
10495: rs1207082447 10496: rs149143793 10500: rs1007400582 10501:
rs1251592778 10503: rs970881275 10506: rs1482287094 10509: rs1257861507
10514: rs1214838623 10517: rs1265985335 10520: rs587767495 10529:
rs772622950 10536: rs924066141 10538: rs1311495155 10550: rs956877237
10552: rs1336863301 10555: rs773662058
Bonobo A-----------GGAGTTGGGAGTGAGTGTTGGCACATAGGCCAAGGG-
CTGGGCGT-TAGAGTATGTGGAACCTACTATATTTCTCCT--GTTTA-TTGTCC--AC--CCTTTTACTTG
Chimpanzee A-----------GGAGTTGGGAGTGAGTGTTGGCACATAGGCCAAGGG-
CTGGGCGT-TAGAGTATGTGGAACCTACTATATTTCTCCT--GTTTA-TTGTCC--AC--CCTTTTACTTG
Gorilla A-----------GGAGTTGGGAGTGAGTGTTGGCACATAGGCCAAGGG-
CTGGGCGT-TAGAGTATGTGGAACCTACTATATTTCTCCT--GTTTA-TTGTCC--AC--CCTTTTACTTG
Orangutan A-----------GGAGTTGGGAGTGAGTGTTGGRGCATAGGCCAAGGG-
CTGGGCYT-TAGAGTATGTGGAACCTACTATATTTCTCCT--GTTTA-TTGTCC--AC--CCTTTTACTTG
10474: rs170967280 10496: rs170967279
Vervet-AGM A-----------GGAGTTGGGAGGGAATGCTGGCACACAGGCCAAGGG-
CTGGGCAT-TAGAGTATGTGGAACCTACTATATTTCTCCT--GTTTA-TTGTCC------ACTTTTATTTG
Crab-eating macaque A-----------GGAGTTGGGAGTGAATGCTGGCACACAGGCCAAGGG-
CTGGGCAT-TAGAGTATGTGGAACCTACTATATTTCTTCT--GTTTA-TTGTCC----ACCCTTTTATTTG
Macaque A-----------GGAGTTGSGAGTGAATGCTGGCACACAGGCCAAGGG-
CTGGGCAT-TAGAGTYTGTGGAACCTACTATATTTCTTCT--GTTTA-TTGTCC----ACCCTTTTATTTG
10460: rs292546635 10505: rs1079702614
10563: rs1445179429 10573: rs989702937 10575: rs915484992 10586:
rs999565468 10587: rs1030914940 10590: rs960640906
10595: rs1075492740