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Paper2 - Xylooligosaccharide Production From Sugarcane Bagasse Using Recombinant Endoxylanase of Bacillus Halodurans
Paper2 - Xylooligosaccharide Production From Sugarcane Bagasse Using Recombinant Endoxylanase of Bacillus Halodurans
Paper2 - Xylooligosaccharide Production From Sugarcane Bagasse Using Recombinant Endoxylanase of Bacillus Halodurans
https://doi.org/10.1007/s12355-021-01096-x
S . I . : D I V E R S I F I C A T I O N O F S UG A R C R O P S F O R V A L U E A D D I T I O N
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HPLC by using the HPX-87H column to determine the hydrolysis. The purity of xylan was 51.91%, suggesting
concentrations of xylose, xylobiose, xylotriose, and that the xylan extracted after NaOH pretreatment and
xylotetraose. Details of the HPLC conditions were the ethanol precipitation contains not only xylan but also lig-
same as those used for the composition assay. nin, glucan, arabinosyl, and uronic acid groups. The xylan
yield could be briefly increased to 61.7% with an increased
concentration (40%) of NaOH (w/w) (Sporck et al. 2017).
Results and Discussion We have tried to reduce the amount of ethanol used in
xylan precipitation step. After the sugarcane bagasse was
Xylan Preparation pretreated with 4% NaOH at 60 °C for 24 h and the pH
value of the obtained alkali-soluble fraction was neu-
For xylan extraction, sugarcane bagasse was pretreated tralised to 7.0, then 95% ethanol was added in different
with sodium hydroxide solution. As shown in Table 1, the ratios of the alkali-soluble fraction to ethanol for further
raw material sugarcane bagasse contains 31.17% w/w incubation at 4 °C for 24 h. When the ratios of alkali-
glucan, 26.58% w/w lignin, and 15.35% w/w xylan in the soluble solution to ethanol were 1:0.5, 1:1, 1:2, and 1:3, the
dry biomass. The raw material also contains 1.11% of yields of crude xylan were 0.077 ± 0.008, 0.096 ± 0.019,
extractive, which is soluble in water or ethanol during the 0.138 ± 0.010, and 0.135 ± 0.019 g/g-sugarcane bagasse,
Soxhlet extraction. The ethanol-soluble fraction in sugar- respectively. The results show that the best condition for
cane bagasse may be waxy materials, low molar mass ethanol precipitation is that the ratio of alkali-soluble
aromatics, and oligosaccharides (Masarin et al. 2011). For fraction to ethanol is 1:2. When the ratio is less than 1:2,
xylan extraction, sugarcane bagasse is commonly pre- the yield of crude xylan decreased significantly.
treated with NaOH and KOH. An increasing alkaline
concentration can increase the dissolution and removal of Endoxylanase Production
hemicellulose and lignin in pretreated bagasse (Safirzadeh
et al. 2017). On the basis of the best conditions obtained by The protein overexpressed by recombinant E. coli BL21
Nascimento et al. (2016), 4% NaOH was used here. (DE3) harbouring pET-15b-xynM was endoxylanase
However, we used 30 °C for 24 h instead of their harsh modified from the GH10 xylanase of alkaliphilic B. halo-
conditions (121 °C for 60 min) for saving energy. Pre- durans BCRC 910,501, which was previously named as B.
treatment for large-scale production under harsh conditions firmus (Chang et al. 2004). The amino acid sequence is
(121 °C) requires special reactors and well-managed con- identical to the one obtained from B. halodurans BCRC
trol systems, which will increase capital and operating 910,501 except for two amino acid mutations: 364D ? G
costs. In addition, pretreatment under harsh conditions will and 393G ? R. These changes are based on the amino
cause partial hemicellulose degradation and produce toxic acid sequence of endoxylanase from B. halodurans C-125.
by-products, which will inhibit enzymes in subsequent According to the calculation performed using the ExPASy
steps. We are trying to optimise the alkaline pretreatment protein structure homology-modelling server Swiss-Model
by changing the parameters in the range of low temperature (Waterhouse et al. 2018), the changes in the two amino
(40–60 °C) and low sodium hydroxide concentration acid residues of this enzyme had little effect on the protein
(2–6%). Basically, increasing the temperature or increasing confirmation. However, this inconspicuous change may
the NaOH concentration can shorten the incubation time. cause the structure at the C terminus to become tight. The
After alkaline pretreatment and ethanol precipitation, crude endoxylanase GH10 obtained from B. halodurans BCRC
xylan was obtained. Xylan composition was determined 910,501 showed enzymatic activities over a broad pH
using the same method used for determining the bagasse range of 4–11 at 37 °C, and it was optimally active at
sample composition. The purity of xylan was determined 70 °C when assayed at either pH 7 or 9. Furthermore, this
based on the measurement of xylose released after enzyme could be fully active and retained 80% of its
0.11 99.89 99.84 1.11 0.63 25.95 0.12 31.17 15.35 0.18
*
%Ts and %Tfinal are percentages of dried mass before and after Soxhlet extraction, respectively. The weight of the air-dried sample after
extraction is subtracted from the weight of the sample before extraction, and the obtained value is divided by the oven dry weight of the extracted
sample to obtain the percentage of extractive (%Extractive)
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activities after 14 and 16 h, respectively, of preincubation enzymatic activity mainly in the culture medium. When the
at 62 °C (Chang et al. 2004). Because of its high ther- batch-grown bacteria were induced to express recombinant
mostability, the enzyme reaction for XOS production can proteins at 30 °C for 18 h, extracellular protein activity
be performed at a high temperature. accounted for 80.43 ± 6.36% of the total enzymatic
The recombinant E. coli BL21 (DE3) harbouring pET- activity. The concentrations of extracellular proteins in
15b-xynM was cultured in batch (in flask) and fed-batch (in terms of amount and activity were 2.67 ± 0.05 mg/mL and
bench-top fermenter) modes separately for producing 20.04 ± 4.11 U/mL, respectively. Compared with enzyme
endoxylanase. When bacterial cells were cultivated in a production from B. halodurans S7, 0.574 mg/mL amount
flask containing LB medium, the induction for recombinant and 5.1 U/mL activity were observed in the culture
protein expression with IPTG began when OD600nm supernatant of a 36-h-old culture (Mamo et al. 2006).
reached 0.8–1.0. When bacterial cells were cultivated in a Table 2 shows also the results of recombinant endoxy-
fermenter and fed with PM medium, a high cell density up lanase expressed by recombinant E. coli with fed-batch
to OD600nm of 35 could be achieved before adding IPTG cultivation to produce high cell density in a bench-top
with a concentration of 0.1 mM/OD600nm to induce fermenter. The concentrations of extracellular proteins in
recombinant protein expression. Figure 2 shows the SDS- terms of amount and activity were 10.84 ± 1.07 mg/mL
PAGE of proteins expressed through recombinant E. coli and 45.9 ± 7.32 U/mL, respectively. Furthermore, the
BL21 (DE3) harbouring pET-15b-xynM. The target protein majority of overexpressed proteins were found in the cul-
is shown as a dark band on the SDS-PAGE gel of proteins ture medium. The extracellular protein activity accounts
in the culture medium. The first 23-amino-acid sequence for 89.13 ± 0.66 of the total enzymatic activity. In com-
shown in Fig. 1 is the signal peptide. When a His-tag was parison with the batch culture in a flask, the recombinant
included in front of the signal peptide at N terminus, the bacteria cultivated in fed-batch mode could produce more
estimated molecular mass of this fused protein containing amount of endoxylanase because of high cell density and
416 amino acids was theoretically 47,490.79 Da. If the secretion of almost all the overexpressed proteins out of the
signal peptide is removed from the synthesised protein cell and into the culture. The fed-batch culture was induced
during the secretory process, the resultant protein could to produce recombinant protein expression at 25 °C for
have an estimated molecular mass of 42,999.52 Da. The 18 h. Moreover, induction at 30 °C could increase the
location of the dark band of target protein in Fig. 2 is closer activity concentration to 53.53 U/mL.
to 43 kDa than to 47.5 kDa, suggesting that the signal
peptide works well in E. coli. XOS Production
Results shown in Table 2 indicate that the recombinant
E. coli could produce recombinant endoxylanase through To 1 L of reactor, 0.225 U/mL of endoxylanase produced
by recombinant E. coli was used as a biocatalyst. Time
courses of XOS production from sugarcane bagasse xylan
at pH 7.0 and 60 °C are shown in Fig. 3. For mixing xylan
and enzyme evenly in the reactor, the reaction was per-
formed with mild agitation (200 rpm) and air purge (* 2
vvm). Initially, most of the xylan in the solution was
insoluble, but small amounts of soluble xylooligomers
(DP C 4) were produced due to autolysis in alkaline con-
ditions. Furthermore, xylobiose and xylotriose were pro-
duced within 2 h when the recombinant endoxylanase was
used in the xylan solution. Simultaneously, insoluble xylan
was digested to form soluble high DP xylooligomers,
which subsequently degraded into xylobiose and xylo-
triose. As suggested by Bian et al. (2013), xylobiose and
xylotriose accumulate rapidly in the first 2 h, possibly
because the enzyme preferentially acts on the end of the
Fig. 2 SDS-PAGE analysis of proteins expressed by recombinant xylan chain. Figure 3 shows that the concentrations of
E. coli BL21 (DE3) harbouring pET-15b-xynM in a high cell density xylobiose and xylotriose gradually increased with time,
culture after IPTG induction at 25[Error hu2103] for 18 h. Lane M, whereas soluble xylooligomers (DP C 4) accumulated
marker; Lane 1, extracellular proteins in the culture medium; Lane 2,
rapidly after 6 h. Subsequently, all the components
soluble fraction of intracellular proteins; and Lane 3, insoluble
fraction of intracellular proteins. The arrow indicates the band for increased slowly over time, and the soluble high DP
target protein xylooligomers continued to degrade into oligomers with
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Table 2 Activity of the crude enzyme induced using 0.1 mM inducer IPTG final concentration for 18 h
Cultivation Inducing Inducer (IPTG) Sample* U/mL Ratio to total Protein conc. Specific activity,
methods temperature (°C) conc activity (%) (mg/mL) U/mg
Batch 30 0.1 mM Medium 20.04 ± 4.11 80.43 ± 6.36 2.67 ± 0.05 7.5 ± 1.41
Supernatant 3.63 ± 0.16 14.81 ± 2.51 4.86 ± 0.3 7.48 ± 0.15
Pellet 1.12 ± 0.81 4.76 ± 3.86 0.65 ± 0.06 16.86 ± 11.07
Fed-batch 25 0.1 mM Medium 45.9 ± 7.32 89.13 ± 0.66 10.84 ± 1.07 4.23 ± 0.26
Supernatant 4.39 ± 0.32 8.67 ± 1.94 12.35 ± 3.58 3.67 ± 0.8
Pellet 1.19 ± 0.83 2.21 ± 1.27 2.5 ± 1.32 6.5 ± 6.72
*
’’Medium’’ is the culture medium from which cells have been removed and contains extracellular proteins. ‘‘Supernatant’’ and ‘‘Pellet’’ are the
supernatant and precipitate of the cell lysate after centrifugation, respectively
Conclusion
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