Paper2 - Xylooligosaccharide Production From Sugarcane Bagasse Using Recombinant Endoxylanase of Bacillus Halodurans

You might also like

Download as pdf or txt
Download as pdf or txt
You are on page 1of 8

Sugar Tech

https://doi.org/10.1007/s12355-021-01096-x

S . I . : D I V E R S I F I C A T I O N O F S UG A R C R O P S F O R V A L U E A D D I T I O N

Xylooligosaccharide Production from Sugarcane Bagasse using


Recombinant Endoxylanase of Bacillus Halodurans
Ying-Hsuan Tseng1 • Wen-Chien Lee1 • Kridsana Krisomdee2 • Waranya Natesuntorn2 •
Sunisa Chatsurachai2 • Klanarong Sriroth2

Received: 30 July 2020 / Accepted: 26 December 2021


Ó The Author(s), under exclusive licence to Society for Sugar Research & Promotion 2022

Abstract Xylooligosaccharides (XOSs) can be manufac- Keywords Sugarcane bagasse 


tured from sugarcane bagasse as a value-added product in Xylooligosaccharides (XOS)  Endoxylanase 
the sugar industry. To produce XOS, xylan was extracted Recombinant  Bacillus halodurans
from sugarcane bagasse by using sodium hydroxide, pre-
cipitated in ethanol, and subjected to enzymatic hydrolysis
by using endoxylanase to form xylooligomers. We con- Introduction
structed a recombinant strain of Escherichia coli harbour-
ing the recombinant plasmid containing a gene encoding Sugarcane bagasse is a potential lignocellulose feedstock
endoxylanase modified from GH10 xylanase of alkaliphilic for the production of biofuels and bio-based chemicals,
Bacillus halodurans BCRC 910,501. Results from the flask which can be generated through fermentation from the
culture showed that in terms of activity, 80.43 ± 6.36% of cellulosic biomass after pretreatment and enzymatic
recombinant proteins were secreted to the medium under hydrolysis of cellulose. In addition to cellulose (Uppal
the induction of 0.1 mM isopropyl b-D-1-thiogalactopy- et al. 2011; Bhatia and Johri 2016), hemicellulose is
ranoside (IPTG) for 18 h at 30 °C. The activity concen- another primary fraction in this cellulosic biomass that can
tration in the medium was 20.04 ± 4.11 U/mL. When this be converted into biomass-based chemicals, such as fur-
strain was fed-batch cultivated to high cell density in a fural (Uppal and Kaur 2011) and xylitol (Xu et al. 2019),
bench-top fermenter, 89.13 ± 0.66% of the recombinant and high value-added compounds, such as xylooligosac-
enzymes were found in the medium, and the active protein charides (XOSs) (Brienzo et al. 2010; Jayapal et al. 2013).
concentration was 45.9 ± 7.32 U/mL. Thus, the recombi- Hemicellulose comprises 22–36% of sugarcane bagasse.
nant E. coli has the potential for large-scale production of Xylan is the predominant component of sugar in the
endoxylanase. A 24-h enzyme reaction yielded 44.91% (w/ hemicellulose of sugarcane bagasse because it con-
w) of XOS from xylan. Among the total soluble oligomers tains [ 80% of xylose in the backbone. Thus, xylan
in the product, 40.6% (w/w) were xylobiose and xylotriose. extracted from sugarcane bagasse is ideal for XOS
production.
XOSs are oligomers of the five-carbon sugar xylose and
are currently used as a prebiotic. XOS uptake has several
benefits to human health, including favouring the selective
& Wen-Chien Lee growth of beneficial Bifidobacterium spp, suppressing the
chmwcl@ccu.edu.tw activity of entero-putrefactive and pathogenic intestinal
1
bacteria through the production of short-chain fatty acids,
Department of Chemical Engineering, National Chung Cheng
and facilitating nutrient absorption (Alonso et al. 2003). In
University, 168 University Road, Minhsiung, Chiayi 621,
Taiwan addition to their nutritional value as functional foods to
2 human, XOSs have been used as animal feed additives.
Mitr Phol Sugarcane Research Center Co., Ltd., 399 Moo 1
Chumpae-Phukieo Road, Khoksa-at, Phukieo, Chaiyaphum XOSs are chains of xylose molecules linked with b1–4
36110, Thailand bonds with a degree of polymerisation (DP) ranging from 2

123
Sugar Tech

to 10 (Makelainen et al. 2009). XOSs can be produced Materials and Methods


through xylan hydrolysis by using enzymatic or chemical
methods (hydrothermal treatments) or a combination of Composition Assay of Sugarcane Bagasse
both (Aachary and Prapulla 2011; Mandelli et al. 2014).
Both chemical and enzymatic methods have been used for The composition of bagasse samples was analysed
xylan hydrolysis from sugarcane bagasse to yield XOS according to the following protocol: 1 g of the milled
(Brienzo et al. 2010, 2016; Bian et al. 2013; Bragatto et al. sample was extracted using deionised water and 95%
2013; Mandelli et al. 2014; Kaur et al. 2019). Enzymatic ethanol in Soxhlet apparatus for 6 h each. Then, 300 mg of
hydrolysis is advantageous in preventing the formation of the extracted sample was hydrolysed with 72% sulphuric
toxic by-products due to low temperature and high speci- acid at 45 °C for 10 min. The resultant mixture was diluted
ficity. For use as a food ingredient, XOS must be produced to a final concentration of 4% and then heated at 121 °C in
through enzymatic reaction. For XOS production, xyla- an autoclave for 30 min. After filtration, glucose, xylose,
nases must mainly have the function of endo-1,4-xylanases. and arabinose in the filtrates were determined through
Many studies have explored the microbial sources of high-performance liquid chromatography (HPLC). The
enzymes for XOS production, including Aspergillus foeti- chromatographic separation was performed in a Biorad
dus MTCC 4898 (Chapla et al. 2012), A. oryzae MTCC Aminex HPX-87H column (300 9 7.8 mm i.d.) at 65 °C,
5154 (Aachary and Prapulla 2009), Bacillus amylolique- and the flow rate was set as 0.6 mL min-1 by using 5 mM
faciens NRRL B-14393 (Rashad et al. 2016), B. mega- sulphuric acid as the mobile phase. The residual solid from
terium (Sun et al. 2015), B. pumilus MK001 (Kapoor and the filtration was dried to a constant weight at 60 °C and
Kuhad 2007), B. subtilis KCX006 (Reddy and Krishnan weighted as acid-insoluble lignin (AIL). For determining
2016), B. subtilis (Bragatto et al. 2013), Clostridium ther- acid-soluble lignin (ASL), the filtrate was assayed through
mocellum (Mandelli et al. 2014), Eupenicillium javanicum ultraviolet–visible spectroscopy to determine the absor-
(Tanaka et al. 2009), Paenibacillus sp. NF1 (Zheng et al. bance of the sample at a wavelength of 240 nm, as sug-
2014), Paecilomyces themophila J18 (Teng et al. 2010), gested by Sluiter et al. (2012). For determination of the ash
Pichia stipites (Yang et al. 2011), Streptomyces oli- content, the sample was burned in a high-temperature
vaceoviridis E-86 (Ai et al. 2005), S. thermovulgaris furnace. After placing the sample in the furnace, the tem-
TISTR1948 (Boonchuay, et al. 2014), S. violascens BF perature was increased from room temperature to 105 °C
3.10 (Salupia et al. 2015), Talaromyces thermophilus and held for 12 min, and then, the temperature was
(Maalej-Achouri et al. 2009), Thermoascus aurantiacus increased to 575 °C at a rate of 20 °C/min. After burning at
ATCC 204,492 (Brienzo et al. 2010), Thermobifida fusca 575 °C for 3 h, the temperature dropped to 105 °C and
(Yang et al. 2007), and Trichoderma longibrachiatum then to room temperature (Sluiter et al. 2012).
(Saleh et al. 2016). We previously found that endoxy-
lanases in B. halodurans were effective in producing XOS Xylan Extraction
from xylan (Lin et al. 2011). Two extracellular endo-1,4-b-
xylanases (E.C. 3.2.1.8), which are encoded by xyn45 and Sugarcane bagasse obtained from Mitr Phol sugarcane mill
xyn23 genes and belong to the glycosyl hydrolase (GH) (Phukiao factory: PK sample) was milled into powders (40
family 10 and 11, respectively, can be found in B. halo- mesh) and then soaked in 4% NaOH with a solid–liquid
durans (Tseng et al. 2002; Chang et al. 2004). According to ratio of 1:15 (w/v) at 30 °C for 24 h. The incubated mix-
Hu and Saddler (2018), GH10 xylanase performs better ture was then centrifuged, and the resulting alkali-soluble
than GH11 xylanase for deconstructing pretreated biomass. fraction was neutralised with hydrochloric acid solution to
In this study, the recombinant GH10 xylanase of B. halo- a final pH of 7.0. Thrice the volume of 95% ethanol was
durans (encoded by xyn45 gene) was thus constructed for then added, and the resultant mixture was incubated at 4 °C
producing XOS from sugarcane bagasse. GH10 genes from for 24 h. Xylan was obtained from the recovered precipi-
B. halodurans BCRC 910,501 (Chang et al. 2004) and B. tate as the substrate for XOS production.
halodurans C-125 (Takami et al. 2000) were combined for
the recombinant enzyme. Construction of the Endoxylanase Recombinant
Strain

The amino acid sequence of recombinant endoxylanase is


shown in Fig. 1. Corresponding DNA, named as xynM
(1191 bp), was chemically synthesised and inserted into a
plasmid pET-15b. Codons for this hybrid endoxylanase,

123
Sugar Tech

200 and 1000 rpm. The cultivation pH was controlled at


6.8 by using 25% ammonia solution and a feeding solution,
respectively, as alkaline- and acid-adjusting agents. The
feeding solution consisted of 500 g/L of glycerol, 15 g/L of
MgSO47H2O, and 50 g/L of yeast extract. When OD600nm
of 35 was achieved, IPTG with the concentration of
0.1 mM/OD600nm was used to induce the expression of
Fig. 1 Amino acid sequence of endoxylanase modified from the recombinant protein for 18 h at 25 °C.
endoxylanase GH10 of B. halodurans BCRC 910,501

Characterisation of Protein Expression


including the original signal peptide (first 23 amino acids),
were optimised for expression in Escherichia coli. To
The broth culture in the flask or fermenter was harvested at
construct the recombinant plasmid, the target gene (xynM)
postinduction and centrifuged. The collected supernatant
was first amplified using polymerase chain reaction (PCR)
contained extracellular proteins secreted into the culture
with the forward primer 5’-CGC CAT ATG ATT ACC
medium. Cell pellets were suspended in 100 mM Tris–HCl
CTG TTC AA-3’ and the reverse primer 5’-GCG GGA
buffer (pH 7.5) supplemented with 0.1 mM phenyl-
TCC TTA ATC AAT GCG CCA-3’. The PCR-amplified
methylsulphonyl fluoride. The cells were disrupted by
product was confirmed through agarose gel electrophoresis,
passing them through a French press at 1000–1500 psi. The
purified, and double digested with the restriction endonu-
lysate was centrifuged at 7537 9 g for 10 min at 4 °C, and
cleases NdeI and BamHI. Furthermore, plasmid DNA pET-
the supernatant and precipitate were collected. The pre-
15b (5708 bp) was purified and double digested using the
cipitate was suspended in 100 mM Tris-base (pH 7.5).
same restriction endonucleases. Ligation was performed
Proteins in the intracellular soluble (supernatant) and
through a combination of 50 ng of vector and threefold
insoluble (precipitate) fractions as well as extracellular
molar excess of insert. After adjusting the volume to 10 lL
proteins were analysed through sodium dodecyl sulphate
with nuclease-free water and adding 10 lL of 2 9 Quick
polyacrylamide gel electrophoresis (SDS-PAGE) by using
Ligation Buffer and 1 lL of Quick T4 DNA Ligase, the
a 10% acrylamide gel. The resolved protein bands were
mixture was mixed thoroughly and incubated at room
visualised through Coomassie brilliant blue staining. Fur-
temperature (25 °C) for 6 h. After cooling on ice, the
thermore, extracellular and intracellular protein fractions
recombinant plasmid was transformed into E. coli DH5a.
were assayed for endoxylanase activity.
Colony PCR was used for analysing the recombinant
plasmid that was transformed into E. coli DH5a. The
Enzymatic Activity Assay
bacterial colony harbouring the recombinant plasmid was
confirmed through DNA sequencing. This recombinant
Enzymatic activity was determined based on the release of
plasmid was named as pET-15b-xynM and was finally
reducing sugar from xylan by using the dinitrosalicylic acid
transformed into E. coli BL21 (DE3) for endoxylanase
(DNS) method. A mixture of crude enzyme and 1% (w/v)
production.
birchwood xylan dissolved in 10 mM sodium phosphate
buffer, pH 7.0, was incubated at 60 °C for 5 min. The
Xylanase Production
reaction was stopped with the addition of DNS reagent.
One unit of the xylanase activity was defined as the amount
Batch culture was conducted at 37 °C in an Erlenmeyer
of enzyme released in 1 lmol of reducing sugar equivalent
flask containing 50 mL of LB medium and 50 mg mL-1
to xylose per minute under the assay conditions.
ampicillin. When OD600nm achieved 0.8–1.0, IPTG was
added to induce recombinant protein expression for 18 h at
XOS Production Through Enzymatic Hydrolysis
30 °C.
For fed-batch cultivation, a flask culture of 50 mL of LB
Crude enzyme xylanase, with a total activity of 0.225
medium was inoculated to a bench-top fermenter contain-
U/mL, was added to a well-mixed solution of 2.0% (w/v)
ing 1 L of PM medium composed of the following (per
xylan in 1 L 100 mM Tris–HCl buffer (pH 7.0). The
litre): 20 g of glycerol, 3 g of (NH4)2HPO4, 7 g of KH2-
mixture was incubated at 60 °C with mild agitation
PO4, 0.8 g of citric acid, 1 g of MgSO47H2O, 2 g of yeast
(200 rpm) and air input (around 2 vvm) to prevent pre-
extract, and 3 mL of trace metal solution. Fermentation
cipitation at the bottom of the reactor. The reaction was
was conducted at 37 °C with an aeration rate of 2 vvm. The
performed with thorough mixing. A sample of 100 lL was
dissolved oxygen concentration was maintained at 20% of
obtained at different reaction times and diluted with ddH2O
air saturation through varying the agitation rate between
to 10% before filtration. The filtrate was analysed through

123
Sugar Tech

HPLC by using the HPX-87H column to determine the hydrolysis. The purity of xylan was 51.91%, suggesting
concentrations of xylose, xylobiose, xylotriose, and that the xylan extracted after NaOH pretreatment and
xylotetraose. Details of the HPLC conditions were the ethanol precipitation contains not only xylan but also lig-
same as those used for the composition assay. nin, glucan, arabinosyl, and uronic acid groups. The xylan
yield could be briefly increased to 61.7% with an increased
concentration (40%) of NaOH (w/w) (Sporck et al. 2017).
Results and Discussion We have tried to reduce the amount of ethanol used in
xylan precipitation step. After the sugarcane bagasse was
Xylan Preparation pretreated with 4% NaOH at 60 °C for 24 h and the pH
value of the obtained alkali-soluble fraction was neu-
For xylan extraction, sugarcane bagasse was pretreated tralised to 7.0, then 95% ethanol was added in different
with sodium hydroxide solution. As shown in Table 1, the ratios of the alkali-soluble fraction to ethanol for further
raw material sugarcane bagasse contains 31.17% w/w incubation at 4 °C for 24 h. When the ratios of alkali-
glucan, 26.58% w/w lignin, and 15.35% w/w xylan in the soluble solution to ethanol were 1:0.5, 1:1, 1:2, and 1:3, the
dry biomass. The raw material also contains 1.11% of yields of crude xylan were 0.077 ± 0.008, 0.096 ± 0.019,
extractive, which is soluble in water or ethanol during the 0.138 ± 0.010, and 0.135 ± 0.019 g/g-sugarcane bagasse,
Soxhlet extraction. The ethanol-soluble fraction in sugar- respectively. The results show that the best condition for
cane bagasse may be waxy materials, low molar mass ethanol precipitation is that the ratio of alkali-soluble
aromatics, and oligosaccharides (Masarin et al. 2011). For fraction to ethanol is 1:2. When the ratio is less than 1:2,
xylan extraction, sugarcane bagasse is commonly pre- the yield of crude xylan decreased significantly.
treated with NaOH and KOH. An increasing alkaline
concentration can increase the dissolution and removal of Endoxylanase Production
hemicellulose and lignin in pretreated bagasse (Safirzadeh
et al. 2017). On the basis of the best conditions obtained by The protein overexpressed by recombinant E. coli BL21
Nascimento et al. (2016), 4% NaOH was used here. (DE3) harbouring pET-15b-xynM was endoxylanase
However, we used 30 °C for 24 h instead of their harsh modified from the GH10 xylanase of alkaliphilic B. halo-
conditions (121 °C for 60 min) for saving energy. Pre- durans BCRC 910,501, which was previously named as B.
treatment for large-scale production under harsh conditions firmus (Chang et al. 2004). The amino acid sequence is
(121 °C) requires special reactors and well-managed con- identical to the one obtained from B. halodurans BCRC
trol systems, which will increase capital and operating 910,501 except for two amino acid mutations: 364D ? G
costs. In addition, pretreatment under harsh conditions will and 393G ? R. These changes are based on the amino
cause partial hemicellulose degradation and produce toxic acid sequence of endoxylanase from B. halodurans C-125.
by-products, which will inhibit enzymes in subsequent According to the calculation performed using the ExPASy
steps. We are trying to optimise the alkaline pretreatment protein structure homology-modelling server Swiss-Model
by changing the parameters in the range of low temperature (Waterhouse et al. 2018), the changes in the two amino
(40–60 °C) and low sodium hydroxide concentration acid residues of this enzyme had little effect on the protein
(2–6%). Basically, increasing the temperature or increasing confirmation. However, this inconspicuous change may
the NaOH concentration can shorten the incubation time. cause the structure at the C terminus to become tight. The
After alkaline pretreatment and ethanol precipitation, crude endoxylanase GH10 obtained from B. halodurans BCRC
xylan was obtained. Xylan composition was determined 910,501 showed enzymatic activities over a broad pH
using the same method used for determining the bagasse range of 4–11 at 37 °C, and it was optimally active at
sample composition. The purity of xylan was determined 70 °C when assayed at either pH 7 or 9. Furthermore, this
based on the measurement of xylose released after enzyme could be fully active and retained 80% of its

Table 1 Composition of sugarcane bagasse as the raw material*


Moisture (%) %Ts %Tfinal %Extractives %ASL %AIL %Ash Glucan (%) Xylan (%) Arabinan (%)

0.11 99.89 99.84 1.11 0.63 25.95 0.12 31.17 15.35 0.18
*
%Ts and %Tfinal are percentages of dried mass before and after Soxhlet extraction, respectively. The weight of the air-dried sample after
extraction is subtracted from the weight of the sample before extraction, and the obtained value is divided by the oven dry weight of the extracted
sample to obtain the percentage of extractive (%Extractive)

123
Sugar Tech

activities after 14 and 16 h, respectively, of preincubation enzymatic activity mainly in the culture medium. When the
at 62 °C (Chang et al. 2004). Because of its high ther- batch-grown bacteria were induced to express recombinant
mostability, the enzyme reaction for XOS production can proteins at 30 °C for 18 h, extracellular protein activity
be performed at a high temperature. accounted for 80.43 ± 6.36% of the total enzymatic
The recombinant E. coli BL21 (DE3) harbouring pET- activity. The concentrations of extracellular proteins in
15b-xynM was cultured in batch (in flask) and fed-batch (in terms of amount and activity were 2.67 ± 0.05 mg/mL and
bench-top fermenter) modes separately for producing 20.04 ± 4.11 U/mL, respectively. Compared with enzyme
endoxylanase. When bacterial cells were cultivated in a production from B. halodurans S7, 0.574 mg/mL amount
flask containing LB medium, the induction for recombinant and 5.1 U/mL activity were observed in the culture
protein expression with IPTG began when OD600nm supernatant of a 36-h-old culture (Mamo et al. 2006).
reached 0.8–1.0. When bacterial cells were cultivated in a Table 2 shows also the results of recombinant endoxy-
fermenter and fed with PM medium, a high cell density up lanase expressed by recombinant E. coli with fed-batch
to OD600nm of 35 could be achieved before adding IPTG cultivation to produce high cell density in a bench-top
with a concentration of 0.1 mM/OD600nm to induce fermenter. The concentrations of extracellular proteins in
recombinant protein expression. Figure 2 shows the SDS- terms of amount and activity were 10.84 ± 1.07 mg/mL
PAGE of proteins expressed through recombinant E. coli and 45.9 ± 7.32 U/mL, respectively. Furthermore, the
BL21 (DE3) harbouring pET-15b-xynM. The target protein majority of overexpressed proteins were found in the cul-
is shown as a dark band on the SDS-PAGE gel of proteins ture medium. The extracellular protein activity accounts
in the culture medium. The first 23-amino-acid sequence for 89.13 ± 0.66 of the total enzymatic activity. In com-
shown in Fig. 1 is the signal peptide. When a His-tag was parison with the batch culture in a flask, the recombinant
included in front of the signal peptide at N terminus, the bacteria cultivated in fed-batch mode could produce more
estimated molecular mass of this fused protein containing amount of endoxylanase because of high cell density and
416 amino acids was theoretically 47,490.79 Da. If the secretion of almost all the overexpressed proteins out of the
signal peptide is removed from the synthesised protein cell and into the culture. The fed-batch culture was induced
during the secretory process, the resultant protein could to produce recombinant protein expression at 25 °C for
have an estimated molecular mass of 42,999.52 Da. The 18 h. Moreover, induction at 30 °C could increase the
location of the dark band of target protein in Fig. 2 is closer activity concentration to 53.53 U/mL.
to 43 kDa than to 47.5 kDa, suggesting that the signal
peptide works well in E. coli. XOS Production
Results shown in Table 2 indicate that the recombinant
E. coli could produce recombinant endoxylanase through To 1 L of reactor, 0.225 U/mL of endoxylanase produced
by recombinant E. coli was used as a biocatalyst. Time
courses of XOS production from sugarcane bagasse xylan
at pH 7.0 and 60 °C are shown in Fig. 3. For mixing xylan
and enzyme evenly in the reactor, the reaction was per-
formed with mild agitation (200 rpm) and air purge (* 2
vvm). Initially, most of the xylan in the solution was
insoluble, but small amounts of soluble xylooligomers
(DP C 4) were produced due to autolysis in alkaline con-
ditions. Furthermore, xylobiose and xylotriose were pro-
duced within 2 h when the recombinant endoxylanase was
used in the xylan solution. Simultaneously, insoluble xylan
was digested to form soluble high DP xylooligomers,
which subsequently degraded into xylobiose and xylo-
triose. As suggested by Bian et al. (2013), xylobiose and
xylotriose accumulate rapidly in the first 2 h, possibly
because the enzyme preferentially acts on the end of the
Fig. 2 SDS-PAGE analysis of proteins expressed by recombinant xylan chain. Figure 3 shows that the concentrations of
E. coli BL21 (DE3) harbouring pET-15b-xynM in a high cell density xylobiose and xylotriose gradually increased with time,
culture after IPTG induction at 25[Error hu2103] for 18 h. Lane M, whereas soluble xylooligomers (DP C 4) accumulated
marker; Lane 1, extracellular proteins in the culture medium; Lane 2,
rapidly after 6 h. Subsequently, all the components
soluble fraction of intracellular proteins; and Lane 3, insoluble
fraction of intracellular proteins. The arrow indicates the band for increased slowly over time, and the soluble high DP
target protein xylooligomers continued to degrade into oligomers with

123
Sugar Tech

Table 2 Activity of the crude enzyme induced using 0.1 mM inducer IPTG final concentration for 18 h
Cultivation Inducing Inducer (IPTG) Sample* U/mL Ratio to total Protein conc. Specific activity,
methods temperature (°C) conc activity (%) (mg/mL) U/mg

Batch 30 0.1 mM Medium 20.04 ± 4.11 80.43 ± 6.36 2.67 ± 0.05 7.5 ± 1.41
Supernatant 3.63 ± 0.16 14.81 ± 2.51 4.86 ± 0.3 7.48 ± 0.15
Pellet 1.12 ± 0.81 4.76 ± 3.86 0.65 ± 0.06 16.86 ± 11.07
Fed-batch 25 0.1 mM Medium 45.9 ± 7.32 89.13 ± 0.66 10.84 ± 1.07 4.23 ± 0.26
Supernatant 4.39 ± 0.32 8.67 ± 1.94 12.35 ± 3.58 3.67 ± 0.8
Pellet 1.19 ± 0.83 2.21 ± 1.27 2.5 ± 1.32 6.5 ± 6.72
*
’’Medium’’ is the culture medium from which cells have been removed and contains extracellular proteins. ‘‘Supernatant’’ and ‘‘Pellet’’ are the
supernatant and precipitate of the cell lysate after centrifugation, respectively

8.98/10.38 = 86.5%. This conversion rate was as high as


the production of XOS from corncob xylan using the intact
enzymes of B. halodurans BCRC 910,501 (Lin et al. 2011).

Conclusion

To produce XOS, hemicellulose consisting of xylan was


extracted from sugarcane bagasse through pretreatment
with sodium hydroxide followed by ethanol precipitation.
Subsequently, it was hydrolysed using an enzyme belong-
ing to family GH10 xylanase. We constructed a recombi-
Fig. 3 Time course of XOS production from xylan of sugarcane nant E. coli carrying a plasmid containing a gene encoding
bagasse using recombinant endoxylanase a modified endoxylanase from alkaliphilic B. halodurans
BCRC 910,501 and cultured it to produce enzyme. As the
lower DP. Towards the end of the 24-h reaction, the con- recombinant endoxylanase was induced in a high-cell-
tent of xylobiose and xylotriose in the total soluble oligo- density culture, approximately 90% of the enzyme activity
mers of the product (8.98 g/L) was 40.6%. The was observed in the culture medium. Using the recombi-
monosaccharide (xylose) produced was \ 1%, suggesting nant endoxylanase, a high conversion rate could be
the exclusively endoxylanase function of this enzyme. achieved with the enzyme hydrolysis of xylan to form XOS
Similar to enzyme form other microbial sources (Mamo at pH 7.0 and 60 °C. Thus, this recombinant enzyme
et al. 2006), the recombinant enzyme degraded xylan in an increases the potential of obtaining a high-value product
endo-fashion. from sugarcane bagasse.
The XOS yield was calculated based on the mass of total
soluble oligomers (DP C 2) in the product obtained from Declarations
one unit mass of xylan. A 24-h enzyme reaction yielded
Conflict of interest The authors declare that there is no conflict of
44.91% (w/w) of XOS from xylan. Thus, the XOS yield interest.
obtained was higher than that (37.1%) obtained through the
hydrolysis of sugarcane bagasse hemicellulose by using the
enzyme from T. aurantiacus at 50 °C. Hemicellulose References
containing approximately 80% xylan was extracted from
dewaxed sugarcane bagasse by using alkaline hydrogen Aachary, A.A., and S.G. Prapulla. 2009. Value addition to corncob:
peroxide and further purified through fractional precipita- Production and characterization of xylooligosaccharides from
alkali pretreated ligninsaccharide complex using Aspergillus
tion with ethanol (Brienzo et al. 2010). Because the purity oryzae MTCC 5154. Bioresource Technology 100: 991–995.
of xylan obtained in this study was 51.91%, the theoreti- Aachary, A.A., and S.G. Prapulla. 2011. Xylooligosaccharides (XOS)
cally maximal XOS concentration that could be obtained as an emerging prebiotic: Microbial synthesis, utilization,
from 2% xylan is 20 g/L 9 51.91% = 10.38 g/L. The structural characterization, bioactive properties, and applica-
tions. Comprehensive Reviews in Food Science and Food Safety
conversion rates with recombinant endoxylanase use were 10: 2–16. https://doi.org/10.1111/j.1541-4337.2010.00135.x.

123
Sugar Tech

Ai, Z., Z. Jiang, L. Li, W. Deng, I. Kusakabe, and H. Li. 2005. Purification and characterization. Enzyme and Microbial Tech-
Immobilization of Streptomyces olivaceoviridis E-86 xylanase nology 39: 1492–1498.
on Eudragit S-100 for xylo-oligosaccharide production. Process Mandelli, F., L.B. Brenelli, R.F. Almeida, R. Goldbeck, L.D. Wolf,
Biochemistry 40: 2707–2714. Z.B. Hoffmam, R. Ruller, G.J.M. Rocha, A.Z. Mercadante, and
Alonso, J.L., H. Dominguez, G. Garrote, J.C. Parajo, and M.J. F.M. Squina. 2014. Simultaneous production of xylooligosac-
Vazquez. 2003. Xylo-oligosaccharides: Properties and produc- charides and antioxidant compounds from sugarcane bagasse via
tion technologies. Electronic Journal of Environmental, Agri- enzymatic hydrolysis. Industrial Crops and Products 52:
cultural and Food Chemistry 2: 230–232. 770–775.
Bhatia, L., and S. Johri. 2016. Optimization of simultaneous Masarin, F., D.B. Gurpilhares, D.C. Baffa, M.H. Barbosa, W.
saccharification and fermentation parameters for sustainable Carvalho, A. Ferraz, and A.M. Milagres. 2011. Chemical
ethanol production from sugarcane bagasse by Pachysolen composition and enzymatic digestibility of sugarcane clones
tannophilus MTCC 1077. Sugar Tech 18: 457–467. selected for varied lignin content. Biotechnology for Biofuels 4:
Bian, J., F. Peng, X.-P. Peng, P. Peng, F. Xu, and R.-C. Sun. 2013. 55.
Structural features and antioxidant activity of xylooligosaccha- Nascimento, V.M., A. Manrich, P.W. Tardioli, R. de Campos
rides enzymatically produced from sugarcane bagasse. Biore- Giordano, G.J. de Moraes Rocha, and R.D.L.C. Giordano.
source Technology 127: 236–241. 2016. Alkaline pretreatment for practicable production of
Boonchuay, P., C. Techapun, P. Seesuriyachan, and T. Chaiyaso. ethanol and xylooligosaccharides. Bioethanol 2: 112–125.
2014. Production of xylooligosaccharides from corncob using a Rashad, M.M., A.E. Mahmoud, M.U. Nooman, H.A. Mahmoud,
crude thermostable endo-xylanase from Streptomyces ther- A.E.M. El-Torky, and A.T. Keshta. 2016. Production of
movulgaris TISTR1948 and prebiotic properties. Food Science antioxidant xylooligosaccharides from lignocellulosic materials
and Biotechnology 23: 1515–1523. using Bacillus amyloliquifaciens NRRL B-14393 xylanase.
Bragatto, J., F. Segato, and F.M. Squina. 2013. Production of Journal of Applied Pharmaceutical Science 6: 30–36.
xylooligosaccharides (XOS) from delignified sugarcane bagasse Reddy, S.S., and C. Krishnan. 2016. Production of high-pure
by peroxide-HAc process using recombinant xylanase from xylooligosaccharides from sugarcane bagasse using crude b-
Bacillus subtilis. Industrial Crops and Products 51: 123–129. xylosidase-free xylanase of Bacillus subtilis KCX006 and their
Brienzo, M., W. Carvalho, and A.M.F. Milagres. 2010. Xylooligosac- bifidogenic function. LWT - Food Science and Technology 65:
charides production from alkali-pretreated sugarcane bagasse 237–245.
using xylanases from Thermoascus aurantiacus. Applied Bio- Safirzadeh, S., M. Chorom, R. Karimi, A. Ariz, H.R. Behravan, and
chemistry and Biotechnology 162: 1195–1205. M. Fadami. 2017. Effects of alkaline pretreatments on chemical
Brienzo, M., A.F.A. Carvalho, F.C. de Figueiredo, and Neto P. de composition of sugarcane bagasse for easy degradation in soil.
Oliva. 2016. Sugarcane bagasse hemicellulose properties Sugar Tech 19: 89–94.
extraction technologies and xylooligosaccharides production In Saleh, S.H., S.N.M.D. Shah, K.A. Khalil, and A. Bujang. 2016.
food waste: Practices management and challenges, 155–188. Xylooligosaccharides production from oil palm frond by
New York: Nova Science Publishers. Trichoderma longibrachiatum xylanase. Malaysian Journal of
Chang, P., W.-S. Tsai, C.-L. Tsai, and M.-J. Tzeng. 2004. Cloning Analytical Sciences 20: 525–530.
and characterization of two thermostable xylanases from an Salupia, W., Y. Yopib, and A. Meryandinic. 2015. Xylanase activity
alkaliphilic Bacillus firmus. Biochemical and Biophysical of Streptomyces violascences BF 3.10 on xylan corncobs and its
Research Communications 319: 1017–1025. xylooligosaccharide production. Media Peternakan 38: 27–33.
Chapla, D., P. Pandit, and A. Shah. 2012. Production of xylooligosac- Sluiter, A., B. Hames, R. Ruiz, C. Scarlata, J. Sluiter, D. Templeton,
charides from corncob xylan by fungal xylanase and their and D. Crocker. 2012. Determination of structural carbohydrates
utilization by probiotics. Bioresource Technology 115: 215–221. and lignin in biomass: Laboratory Analytical Procedure (LAP)
Hu, J., and J.N. Saddler. 2018. Why does GH10 xylanase have better (Version 08–03–2012). https://www.nrel.gov/docs/gen/fy13/
performance than GH11 xylanase for the deconstruction of 42618.pdf. Accessed 12 December 2021.
pretreated biomass? Biomass & Bioenergy 110: 13–16. Sporck, D., F.A.M. Reinoso, J. Rencoret, A. Gutiérrez, J.C. del Rio,
Jayapal, N., A.K. Samanta, A.P. Kolte, S. Senani, M. Sridhar, K.P. A. Ferraz, and A.M.F. Milagres. 2017. Xylan extraction from
Suresh, and K.T. Sampath. 2013. Value addition to sugarcane pretreated sugarcane bagasse using alkaline and enzymatic
bagasse: Xylan extraction and its process optimization for approaches. Biotechnology for Biofuels 10: 296.
xylooligosaccharides production. Industrial Crops and Products Sun, M.Z., H.C. Zheng, L.C. Meng, J.S. Sun, H. Song, Y.J. Bao, H.S.
42: 14–24. Pei, Z. Yan, X.Q. Zhang, J.S. Zhang, Y.H. Liu, and F.P. Lu.
Kapoor, M., and R.C. Kuhad. 2007. Immobilization of xylanase from 2015. Direct cloning expression of a thermostable xylanase gene
Bacillus pumilus strain MK001 and its application in production from the metagenomic DNA of cow dung compost and
of xylo-oligosaccharides. Applied Biochemistry and Biotechnol- enzymatic production of xylooligosaccharides from corncob.
ogy 142: 125–138. Biotechnology Letters 37: 1877–1886.
Kaur, R., S.K. Uppal, and P. Sharma. 2019. Production of Takami, H., K. Nakasone, Y. Takaki, G. Maeno, R. Sasaki, N. Masui,
xylooligosaccharides from sugarcane bagasse and evaluation of F. Fuji, C. Hirama, Y. Nakamura, N. Ogasawara, S. Kuhara, and
their prebiotic potency in vitro. Waste and Biomass Valorization K. Horikoshi. 2000. Complete genome sequence of the alka-
10: 2627–2635. liphilic bacterium Bacillus halodurans and genomic sequence
Lin, Y.-S., M.-J. Tseng, and W.-C. Lee. 2011. Production of comparison with Bacillus subtilis. Nucleic Acids Research 28:
xylooligosaccharides using immobilized endo-xylanase of Bacil- 4317–4331.
lus halodurans. Process Biochemistry 46: 2117–2121. Tanaka, M., T. Hujioka, and R. Mitsui. 2009. Continuous production
Maalej-Achouri, I., M. Guerfali, A. Gargouri, and H. Belghith. 2009. of xylooligosaccharides from xylan by crude enzyme derived
Production of xylo-oligosaccharides from agro-industrial resi- from Eupenicillium javanicum. Bulletin of the Okayama Univer-
dues using immobilized Talaromyces thermophilus xylanase. sity of Science 45: 39–43.
Journal of Molecular Catalysis b: Enzymatic 59: 145–152. Teng, C., Q. Yan, Z. Jiang, G. Fan, and B. Shi. 2010. Production of
Mamo, G., R. Hatti-Kual, and B. Mattiasson. 2006. A thermostable al- xylooligosaccharides from the steam explosion liquor of
kaline active endo-b-1,4-xylanase from Bacillus halodurans S7:

123
Sugar Tech

corncobs coupled with enzymatic hydrolysis using a ther- Xu, L., L. Liu, S. Li, W. Zheng, Y. Cui, R. Liu, and W. Sun. 2019.
mostable xylanase. Bioresource Technology 101: 7679–7682. Xylitol production by Candida tropicalis 31949 from sugarcane
Tseng, M.J., M.N. Yap, K. Ratanakhanokchaic, K.L. Kyuc, and S.T. bagasse hydrolysate. Sugar Tech 21: 341–347.
Chen. 2002. Purification and characterization of two cellulase Yang, C.H., S.F. Yang, and W.H. Liu. 2007. Production of
free xylanases from an alkaliphilic Bacillus firmus. Enzyme and xylooligosaccharides from xylans by extracellular xylanases
Microbial Technology 30: 590–595. from Thermobifida fusca. Journal of Agricultural and Food
Uppal, S.K., and R. Kaur. 2011. Hemicellulosic furfural production Chemistry 55: 3955–3959.
from sugarcane bagasse using different acids. Sugar Tech 13: Yang, H.Y., K. Wang, X.L. Song, and F. Xu. 2011. Production of
166–169. xylooligosaccharides by xylanase from Pichia stipitis based on
Uppal, S.K., R. Kaur, and P. Sharma. 2011. Optimization of chemical xylan preparation from triploid Populas tomentosa. Bioresource
pretreatment and acid saccharification for conversion of sugar- Technology 102: 7171–7176.
cane bagasse to ethanol. Sugar Tech 13: 214–219. Zheng, H.C., M.Z. Sun, L.C. Meng, H.S. Pei, X.Q. Zhang, Z. Yan,
Waterhouse, A., M. Bertoni, S. Bienert, G. Studer, G. Tauriello, R. W.H. Zeng, J.S. Zhang, J.R. Hu, F.P. Lu, and J.S. Sun. 2014.
Gumienny, F.T. Heer, T.A.P. de Beer, C. Rempfer, L. Bordoli, Purification and characterization of a thermostable xylanase
R. Lepore, and T. Schwede. 2018. SWISS-MODEL: Homology from Paenibacillus sp. NF1 and its application in xylooligosac-
modelling of protein structures and complexes. Nucleic Acids charides production. Journal of Microbiology and Biotechnology
Research 46 (W1): W296–W303. 24: 489–496.
Xiong, K., Z.X. Yan, J.Y. Liu, P.G. Pei, L. Deng, L. Gao, and B.G.
Sun. 2020. Inter domain interactions influence the substrate Publisher’s Note Springer Nature remains neutral with regard to
affinity and hydrolysis product specificity of xylanase from jurisdictional claims in published maps and institutional affiliations.
Streptomyces chartreusis L1105. Annals of Microbiology 70: 19.

123

You might also like