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SPECTROS
SPECTROS
(Deemed to be University)
Course Handout
Subject Code-CH1007
Chapter-3: Organic Spectroscopy
Electromagnetic spectrum
Frequency (ν) is defined as the number of waves which can pass through a point in one second,
measured in cycles per second (cps) or hertz (Hz) (1Hz= 1 cps).
Wavelength (λ) is defined as the distance between two consecutive crests or troughs measured in
micrometer (µm) or micron (µ) (1 µm = 1 µ =10-6 m), nanometer (nm) or millimicron (mµ) (1 nm
= 1 mµ =10-9 m) and angstrom (Å) (l Å = 10 -10 m).
Wavenumber (𝝂 ̅ ) is defined as the number of waves which can pass through per unit length usually
1cm. lt is the reciprocal of wavelength expressed in centimeter (cm-1)
E2
En
er ∆E = E2– E =1 hc/λ = hν
gy
E1
V3
E1
Vibrational energy levels
V2
Electronic energy levels
V1
Rotational energy levels
V0
E0
UV-VIS region extends from 100-800nm. It can be divided into three regions:
Note: Vacuum UV region: The molecules of air absorb radiation in this region and thus this region
is accessible only with special vacuum equipment.
Beer Lambert’s law:
This law states that, “When a beam of monochromatic radiation is passed through a solution of an
absorbing substance, the rate of decrease of intensity of radiation with thickness of the absorbing
solution is proportional to the intensity of incident radiation as well as the concentration of the
solution.”
It can be formulated as follows:
UV-visible absorption spectra originate from electronic transitions within a molecule. These
transitions involving promotion of valence electrons from the ground state to the higher-energy
state (excited state) are called electronic excitations and are caused by the absorption of radiation
energy in the UV-Visible regions of the electromagnetic spectrum.
According to molecular orbital theory, the excitation of a molecule by the absorption of radiation
in the UV visible regions involves promotion of its electrons from a bonding, or non-bonding (n)
orbital to an anti-bonding orbital.
σ, π: Bonding orbitals
n: Nonbonding orbitals
σ*, π*: Anti-Bonding orbitals
Various Allowed Electronic Transitions:
*
σ
*
π
E
n
er
n
*
*
nπ π
n σ
*
π σ
*
σ σ
σ→ σ* transitions: It is a high energy process and thus absorptions mostly take place below 200
nm. This transition is studied under vacuum UV region. Ex: Alkanes
n→σ* transitions: Compounds containing non-bonding electrons on a heteroatom can show
absorption due to n→σ* transitions. Ex: Alkyl halides, alcohols, ethers, aldehydes, ketones etc.
π→ π* transitions: These types of transitions occur in compounds containing one or more
covalently unsaturated groups like C=C, C=O, NO2 etc. Ex: Alkenes, Aromatics, Carbonyl
compounds, Cyanides, Azo Compounds etc.
n→ π* transitions: This transition requires lowest energy among all the transitions and in this
transition promotion of an electron from a non-bonding orbital to an antibonding orbital takes
place. Ex: Saturated aldehydes, ketones etc.
Note: This transition is a symmetry forbidden transition and thus the peak intensity is extremely
low.
“It is defined as any isolated covalently bonded group that shows a characteristic absorption in
UV-VIS region.” For example, C =C, C =C, C =O, C =N, N =N, NO2 etc.
A chromophore may or may not impart colour to a compound depending on whether the
chromophore absorbs radiation in the visible or UV region. Mostly the chromophoric group shows
their effect through π→ π* or n→ π* transitions.
Examples:
Auxochrome Concept:
“An auxochrome can be defined as any group which does not act as a chromophore but when
attached to a chromophore, changes both the wavelength and the intensity of the absorption
maximum.” Auxochromes generally increase the value of λmax as well as ϵmax by extending the
conjugation through resonance. These are also called colour enhancing groups.
Examples: -OH, -OR, -NH2, -NHR, -NR2, -SH etc.
Effect of Substitution on the chromophore: Absorption (λmax) and Intensity (ϵmax) shift:
Hyperchromic
Depending upon the λmax value and ϵmax value, four types of shift or effect is observed,
Hypsochromic Bathochromic
ϵ Hypochromic
max
λ
max
Bathochromic Shift or Effect: The shift of an absorption maximum to a longer wavelength region
due to the presence of an auxochrome, or solvent effect is called a bathochromic shift or Red shift.
Hypsochromic Shift or Effect: The shift of an absorption maximum to a shorter wavelength region
is called hypsochromic or blue shift.
Hyperchromic Effect: An effect which leads to an increase in absorption intensity (ϵmax) is called
hyperchromic effect.
Hypochromic Effect: An effect which leads to a decrease in absorption intensity (ϵmax) is called
hypochromic effect.
*
*
σ
(LUMO) π4
*
En π
er * (LUMO)
π3
gy
∆E1 ∆E2
n
π2 (HOMO)
π
(HOMO) π1
σ
Polarity of the solvent plays a vital role and the position, and the intensity of absorption maxima
may be shifted by changing solvent polarity.
π→ π* transitions: Polar solvents lower the energy of the excited state more than the ground state,
so red shift is observed from non-polar to polar solvent.
n→ π* transitions: It has been found that an increase in solvent polarity usually shifts n→ π*
transitions to shorter wavelengths (higher energy). The dipole-dipole interaction or hydrogen
bonding with a polar solvent lowers the energy of the ground state more than that of the excited
state resulting in the hypsochromic shift.
Lecture-3: Woodward-Fieser rules for calculation of 𝝀𝒎𝒂𝒙 in diene systems Woodward and
Fieser formulated
a set of empirical rules for calculating or predicting λmax in conjugated acyclic and six-membered
ring dienes.
2.
Myrcene
3.
β-Phellandrene
4.
Base value: 253 nm
Three ring residues (3 x 5): 15 nm
One exocyclic double bond: 5 nm
Calculated λmax: 273 nm
Observed λmax: 275 nm
5.
Base value: 253 nm
Two ring residues (2 x 5): 10 nm
One extended conjugation: 30 nm
Calculated λmax: 293 nm
1. To increase the λmax of absorption in the electronic spectrum which of the following can be used as
substituent in benzene? a. –CH=CH2, b. –CH2CH3, c. –OH, d. –N=NCH3
2. A ketone of molecular mass 110 has an absorption band with λmax at 215 nm and ε at 10000. A solution of it showed
absorbance= 2.0 with a 1cm cell. Calculate the concentration of the ketone in g/L
5. The signal for n-π* transition found in aniline vanishes when it comes in contact with an acid. Give reason.
T = I/I0,
T% (percent transmittance) =( I/I0) X 100
A = log (1/T )
The ordinary infrared region 4000-667 cm-1 (2.5-15 µm) is of greatest practical use to organic
chemists. This particular region can be divided into two parts, Functional group region (4000-1500
cm-1) and fingerprint region (1500-667 cm-1). In the region 1500-667 cm-1, a unique pattern of
absorptions are observed and it is impossible for any two different compounds to have precisely
the same infrared spectrum, thus it is known as finger print region.
Infrared radiation does not have sufficient energy to cause excitation of electrons, however it
causes atoms and groups of the organic compounds to vibrate faster about the covalent bonds
which connect them. IR spectra are often called vibrational-rotational spectra.
Types of vibration:
Various atoms in a molecule may be regarded as balls of different masses and the covalent bonds
between them as weightless tiny springs holding such balls together. Atoms in a molecule are not
still but they vibrate.
Bending Vibrations: In such vibrations, the positions of the atoms change with respect to
their original bond axes. Bending vibrations are of four types:
Selection rules: The selection rule says, that vibrations are only IR active (or allowed), if the
molecular dipole moment changes during the vibration. A diatomic molecule with the same atoms
cannot be excited to vibrate because no dipole moment is present. In contrast, molecules with
various types of atoms can interact with incident radiation, and even if a dipole moment is not
present in the beginning it can be induced due to antisymmetric displacement of the center of
charge (e.g., CO2).
Examples:
E2 = 5/2 hν
E1 = 3/2 hν
Eo = ½ hν
Each atom has three degrees of freedom corresponding to the three Cartesian Coordinates (x, y and
z) necessary to describe its position relative to other atoms in the molecule. Therefore, a molecule
having n atoms will have 3n degrees of freedom.
In case of a nonlinear molecule, three of the degrees of freedom describe rotation and three
describe translation. Thus, the remaining (3n - 3 - 3) = 3n - 6 degrees of freedom are its vibrational
degrees of freedom or fundamental vibrations, because, Total degrees of freedom (3n) =
Translational + Rotational + Vibrational degrees of freedom
In case of a linear molecule, only two degrees of freedom describe rotation (because rotation
about its axis of linearity does not change the positions of the atom) and three describe translation.
Thus, the remaining (3n - 2 - 3) = 3n – 5 degrees of freedom are vibrational degrees of freedom or
fundamental vibrations.
Examples:
1. Carbon dioxide (CO2): 3 atoms, linear molecule
vibrational degress of freedom: 3n-5 = (3x 3-5) = 4
2. Ethane (C2H6): 8 atoms, non linear molecule
Total degrees of freedom: 3x 8 = 24
vibrational degress of freedom: 3n-6 = (24-6) = 18
Lecture-5: Hooke’s law, problems, identification of functional groups like C-C, C=C, -OH, -
NH2 and -C=O
Calculation of Vibrational Frequencies: Hooke’s law:
The stretching vibrations of two bonded atoms may be regarded as the vibration of two balls
connected by a spring, a situation for which Hooke's law applies. Thus, an approximate value for
the Stretching vibrational frequency, i.e., the stretching absorption frequency of a bond, can be
ca!culated by Hooke's law,
1 ᶄ
ῡ = 2ch√ μ
μ= m1m2 , reduced mass and m1 and m2 are the masses of the atoms. k is the force
m1+m2
Problem: Calculate the wave number of the stretching vibration of a carbon-carbon double bond.
The force constant given is, 106 dynes/cm.
1 √ = 1680 cm-1
ῡ= 106
Coupled Vibrations: Sometimes more than one Stretching vibrational frequency are observed for
one bond. This is due to the mechanical coupling or interaction between the two vibrations.
Example: carboxylic acid anhydrides show two peaks in which symmetrical and asymmetrical
stretching vibrations appear in the region 1720-1825 cm-1. This is due to the coupling of the
vibrations and it is also considered as a characteristic peak for the acid anhydrides.
Hydrogen Bonding: Hydrogen bonding remarkably lowers the Stretching frequencies of both the
groups involved in it, and also changes the shape and intensity of the absorption bands. The
stronger the hydrogen bond, lower is the O-H Stretching frequency.
Distinction between inter- and intramolecular hydrogen bondings: Thus, intermolecular
hydrogen bonding is concentration dependent. On dilution with non-polar solvents, intermolecular
hydrogen bonds are broken. Hence, there is decrease in intensity or disappearance of the hydrogen-
bonded O-H stretching band and increase in intensity or appearance of free O-H
stretching absorption.
However intramolecular hydrogen bonds are unaffected by dilution, and so the absorption band
is also unaffected.
lnductive and Mesomerie (Resonance) Effects: Absorption frequencies of a particular group are
affected by electronic effects, especially inductive and mesomeric (resonance) effects of the nearby
groups. Strength (force constants) of a particular bond is changed by these effects and hence its
Stretching frequency is also changed with respect to the normal values.
Conjugation:
Conjugation lowers the stretching frequency,
1. Identification of Alkane residues (C-C system): Most organic compounds contain alkane
residues and their general appearance may be seen in the IR spectrum. The most
characteristic absorptions in alkanes is C-Hstr and it can be the stretching of both methyl
and methylene group.
Characteristic IR frequencies of Alkanes:
C-H stretching vibrations: 2850-3000 cm-1
CH2 and CH3 Bending vibrations: 1450-1470 cm-1, 1370-1380 cm-1, 720-725 cm-1
Characteristics IR frequencies:
C=C stretching vibrations in Alkene: 1600-1680 cm-1
Aromatics: 1600 and 1475 cm-1
N-H stretching frequencies in Primary and secondary amines and amides: 3500–3100cm-1
N-H bending vibrations in Primary and secondary amines and amides: 1640–1550 cm-1
Normal base values for the CJO stretching vibrations for carbonyl groups
Characteristics IR frequencies:
Not all nuclei possess the property called spin. A list of these nuclei has been presented in the
following part.
For a proton (hydrogen atom), nucleus contains only positive charge. This spinning involves the
movement of a positive charge, and, according to the laws of physics, the movement of charged
particles creates a magnetic field with a magnetic moment. The magnetic moments that come from
the nuclear spins have direction.
+
The distribution of nuclear spins is random in the absence of an external magnetic field as shown
below.
+
+ +
+ +
Random orientation of nuclear spin in the absence of External Magnetic field
But, under the influence of an external magnetic field, nuclear spins have a certain orientations.
The allowed nuclear spin states are determined by the spin quantum number, I, of the nucleus
given by the formula 2I+1. The value of the spin states will vary from –I to +I. As for example I
value of H is ½. So, under the external magnetic field (Bo), the spin states of nucleus of H will be
oriented in (2×1/2 +1 =) 2 ways. One is parallel (+1/2) to the external field and other is antiparallel
(-1/2) to the external field (Bo) as shown in the diagram below. The first one is called spin state
and second one is designated as -spin state. There is a certain energy gap (E) between these two
spin states.
How much lower in energy these nuclei are depends on the strength of external magnetic field
(Bo). As the strength of the magnet increases, the difference in energy (ΔE) between the spins
aligning with the magnetic field (α) and those going against the magnetic field (β) also increases.
This energy gap between the two kinds of spins α and β is what an NMR experiment measures.
• Gyromagnetic ratio () is a constant for each nucleus (26,753 s-1gauss-1 for H).
In an NMR experiment, a radio wave (which indicates light of radio frequencies) effects a
transition between the α and the β spin energy levels. When the frequency of the radio
wave that hits the sample has the exact energy of the energy gap between the α and β spins
(ΔE), the light is absorbed by the nuclei.
The energy from the light absorption is used as a kind of nuclear spatula to flip the α spins
into β spins, a process called spin flipping. When a nucleus absorbs light and flips its spin,
the nucleus is said to be in resonance (which is where the term nuclear magnetic
resonance comes from; this resonance is not to be confused with resonance structures). A
detector can measure the frequency of this absorption and plot it on a spectrum (which is
the plot of an NMR experiment, which shows the intensity of the light absorption versus
the frequency of the light absorbed). A high-frequency light absorption indicates a large
energy gap between the α and β states; a low-frequency light absorption indicates a small
energy gap.
The direction of the magnetic moments of the nuclei line up either with the external
magnetic field (an α spin) or against it (a β spin).
The energy difference between an α spin and a β spin is the ΔE. Upon absorption of light
that has energy equal to the energy gap (ΔE), the nuclei come into resonance, and α spins
are flipped into β spins.
A detector measures the frequency of the absorbed light (which is proportional to the
energy gap between the α and β spins) and then plots the frequency of the light absorbed
on the NMR spectrum versus the intensity of light absorption.
So, that’s how an NMR spectrometer determines the energy gap. But if all the hydrogen nuclei
would have the same energy gap (as the external magnetic field remains same) between α and β
spins, the NMR spectrum would show only a single peak (or single light absorption), representing
all the hydrogens in the molecule. And that wouldn’t be particularly helpful. But discussion so far
has omitted one key ingredient — electrons! So far, this discussion has been limited to bare nuclei
that have no electrons surrounding them.
A moving charge (electron) creates a magnetic field is secondary magnetic field, and the field
created by the moving electrons opposes the applied external magnetic field Bo
1
H nuclei are shielded by the magnetic field produced by the surrounding electrons. The higher
the electron density around the nucleus, the higher the magnetic field required to cause resonance.
The effective/resultant magnetic field, therefore, what the hydrogen nuclei actually “sense”
through the surrounding electronic environment is always less than the actual applied magnetic
field B0. This can be understood from the following diagram.
One potential problem for NMR is that if the nuclei are placed into a large magnet, their resonance
frequency will be larger than when they are placed into a little magnet, because the energy gap
increases as the external magnetic field increases (refer to Figure below).
This means that a proton will show up at a different frequency for the poor person who can only
afford a small magnet than it will for a rich person who can afford a big magnet. To make the
NMR spectrum the same for a given molecule regardless of how large the magnet is, the resonance
frequency is plotted relative to a reference compound, called internal standard and usually
tetramethylsilane (TMS) is used for that purpose. This way, regardless of how big the external
magnetic field is, the peaks in the NMR spectrum will always occur at the same location relative
to TMS. The signal of TMS appeared at a position (of the energy axis) which is considered as
zero.
Internal Standard: TMS (Tetramethyl silane)
4. Since silicon is less electronegative than carbon, TMS protons are highly shielded. Signal
defined as zero.
5. Organic protons absorb downfield (to the left) of the TMS signal.
Chemical Shift
The shifts from TMS in Hz are bigger in higher field instruments (300 MHz, 500 MHz) than they
are in the lower field instruments (100 MHz, 60 MHz). We can adjust the shift to a field-
independent value, the “chemical shift” in the following way:
These chemical shift effects occur because electron circulation is stronger when the plane
of the benzene ring is perpendicular to the magnetic field than when it is parallel to it. Few
examples are provided in the below diagram.
Coupling follows what is called the n + 1 rule. This rule says that a peak will be split n +
1 times, where n is the number of equivalent neighboring hydrogens. A peak that does not
couple and just shows a single line is called a singlet. The alcohol hydrogen in ethanol does
not couple so it gives a singlet. A peak that’s split into two is called a doublet, three
a triplet, four a quartet, and so on.
The coupling constant, or J value, is proportional to the distance between the lines (or the
tops of the peaks) in a signal. This value is given in frequency units (hertz, or Hz), rather
than in ppm, to make the coupling constant independent of the size of the external magnetic
field.
Intensity of Signals
The peak intensity — or the area underneath a peak on a spectrum — is related to the
number of hydrogens that the peak represents. A computer uses the mathematical process
of integration to find the areas underneath each peak. Traditionally, integration is shown
on the spectrum by the addition of an integration curve (see below fig.), although modern
computing has made digital integration common that doesn’t require you to do any
measuring. The height of this integration curve is proportional to the area underneath a
peak, so this height is proportional to the number of hydrogens the peak represents.
Splitting of the Signals follw Pascal’s triangle rule.
Chemical shift: Refers to where a peak appears on a spectrum, relative to the reference molecule
TMS (also called the δ value). The chemical shift is given in units of parts per million (ppm). It
gives you an idea of what kinds of functional groups a hydrogen or carbon is surrounded by.
Integration: Tells you the area underneath a peak, which in turn gives you information about how
many hydrogens a peak represents, relative to the other peaks in the spectrum. Carbon NMR
usually does not have integration on the peaks.
Coupling: Tells you how many hydrogen neighbors a hydrogen sees, following the n + 1 rule.
The n + 1 rule can be applied all at once if a hydrogen is surrounded only by chemically equivalent
hydrogens. It must be done individually when it’s surrounded by two or more chemically
nonequivalent hydrogens. NMR tree-splitting diagrams are used to predict how many peaks will
be found in the spectrum of a given hydrogen that’s surrounded by two or more nonequivalent
hydrogens. Hydrogens on either nitrogen or oxygen generally don’t couple because of fast
exchange processes — these hydrogens generally show up as fat singlets (which go away when
the sample is shaken with D2O).
Coupling constant: Is proportional to the distance between the tops of the peaks in a multiplet.
The coupling constant is referred to as the J value (given in units of Hz). This value can tell you
which hydrogens are coupled to each other because coupled hydrogens have the same coupling
constant
Application of NMR
1. Structure Determination of Organic Compounds: By using this technique, one can able to
determine the C-C, C-H bond connectivity in a molecule: Based on the signal, you have to
predict the structure of simple organic compounds.
2. Reaction monitoring: Signal of 1H NMR can be utilized to predict the progress of a
reaction.
References:
1. What is chemical shift? Mention it’s unit. How do shielding and de-shielding influence chemical
shift values of protons in proton-NMR spectroscopy?
2. What is magneto anisotropic effect? Explain the role of it for identification of olefinic and
acetylinic protons through NMR spectroscopy. How does the effect influence chemical shifts of
aromatic protons?
3. Arrange the following compounds in terms of δ values, found in their 1H-NMR spectroscopic data,
with logic.
4. For assignment of each carbon and oxygen environment in a molecule we use 13C and 17O – NMR
spectroscopic technique, instead of 12C and 16O. Why?
5. Why do OH, NH and SH protons appear at higher δ value at high concentrations than in dilute
solutions?
6. Predict the multiplicities of the signals in the proton-NMR spectra of 1,3-dichloropropane and
1,1,2,3-tetrachloropropane.
7. Why is CDCl3 chosen as a solvent instead of CHCl3 for recording of proton-NMR spectra of a
compound?
a. PhCHO,
b. CH3CH2OH,
OCH3
c.
NO2
H
d.
COOH