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Students Book Block I.3 2023 (104-125)
Students Book Block I.3 2023 (104-125)
3
PRACTICAL SESSION OF BIOCHEMISTRY
MACRONUTRIENT:
CARBOHYDRATE, PROTEIN, AND LIPID
CONTRIBUTOR:
Prof. Dr.Dra. Sunarti, M.Kes
dr. Yogik Onky Silvana Wijaya, Ph.D
Dr. Dra. Prasetyastuti, Apt.,M.Kes
dr. Arta Farmawati, Ph.D.
Department of Biochemistry
Faculty of Medicine, Public Health, and Nursing
Universitas Gadjah Mada
Yogyakarta
2023
1. Students are asked to read Student’s Book Block I.2 which has been uploaded to Gamel
2. Students must do the mini quiz available in Gamel before the practical session according to
the schedule. The rules for doing a mini-quiz:
a. Choose TRUE or FALSE for each statement
b. If your score is 60 or above (≥60), you are allowed to take part in the practical session.
c. If your score is less than (<60), please repeat the mini-quiz until you get a minimum score
of 60 (unlimited repetition), As long as the link is still open, please work on it.
d. If students DO NOT do this Mini Quiz according to the existing schedule. The students
are allowed to follow the practical session according to the schedule and they must do the
assignment according to the on-going practical session topic.
MINI QUIZ
The link for the mini-quiz:
Regular class:
http://ugm.id/MinikuisBiokimReguler
International class:
http://ugm.id/MinikuisBiokimiaInternasional
I. LEARNING OBJECTIVE
After this practical session, students are expected to be able to:
1. Explain the biomedical importance of carbohydrate
2. Explain the biomedical importance of protein
3. Explain the biomedical importance of lipid
II. INTRODUCTION
Carbohydrates are polyhidroxyaldehide, polyhydroxy ketone, or substances that yield this
compound on hydrolysis. They are widely distributed in plants and animals. In plants, glucose is
synthesized from carbon dioxide and water by photosynthesis and stored as starch or converted to
the cellulose of the plant framework. In animals, carbohydrates present as glucose and glycogen
which are important sources of energy. Many carbohydrates play a specific role in the cell,
including ribose in nucleotide, galactose in certain lipids, and lactose as an important component
of milk.
Functions of carbohydrate:
a. Source of energy for living beings, e.g. glucose
b. Storage form of energy, e.g. glycogen in animal tissue and starch in plants
c. Serve as a structural component, e.g. glycosaminoglycans in humans, cellulose in plants
and chitin in insects
d. Non-digestible carbohydrates like cellulose, serve as dietary fibers
e. Constituent of nucleic acids RNA and DNA, e.g. ribose and deoxyribose sugar
f. Carbohydrates are also involved in detoxification, e.g. glucuronic acid.
MONOSACCHARIDES
Monosaccharides are also called simple sugars. The term sugar is applied to carbohydrates that are
soluble in water and sweet to taste. They consist of a single polyhydroxy aldehyde or ketone unit,
and thus cannot be hydrolyzed into a simpler form. They may be subdivided into two groups as
follows:
a. Depending on the number of carbon atoms: trioses (3 Carbons), tetroses (4 carbons),
pentoses (5 Carbons), hexoses (6 Carbons), and heptoses (7 Carbons).
b. Depending on the functional aldehyde (CHO) or ketone (C=O) group: aldoses (for
aldehyde) and ketoses (for ketone).
Monosaccharides can form several types of isomerism (Figure 2). Here, we discuss a few of the
most biological importance of isomers:
a. Dextro- and Levo-isomerism. If the —OH group on the terminal alcohol carbon is on the
right, the sugar is in the d-isomer, and vice versa.
b. Pyran (a six-membered ring) and furan (a five-membered ring) ring structures. Almost all
glucose (99%) in the solution is in a pyranose form (pyran ring).
c. Epimer is a variation in the configuration of the —OH and —H on carbon atoms 2, 3, and
4 of glucose. The most important epimers of glucose are mannose (epimerized at carbon
2), and galactose (epimerized at carbon 4).
Trioses (3 carbon atoms): Trioses are formed during the metabolic breakdown of hexoses in
muscle metabolism, for example, aldotriose (glyceraldehydes, glycerose) and ketotriose
(dihydroxy acetone). Fischer called the enantiomer with the OH group on the left side of the chiral
carbon the L (levo, left) and the one on the right side of the chiral carbon the D (dextro, right).
Tetroses (4 carbon atoms): One of the tetroses, erythrose, is an intermediate in the hexose
monophosphate shunt for the oxidation of glucose.
Pentoses (5 carbon atoms): The most important of pentoses are D-ribose and D-deoxyribose which
are found in ribonucleic acid (RNA) and deoxyribose nucleic acid (DNA), respectively. Ribose
also forms parts of ATP, coenzyme NAD, and NADP. The other aldo pentoses are D-arabinose
and D-xylose.
Hexoses (6 carbon atoms): The hexoses are the most common of all the carbohydrates. Of several
hexoses, the most important are glucose, galactose, mannose (aldohexose), and fructose
(ketohexose).
Glucose is known commonly as dextrose or grape sugar. It can be prepared by the hydrolysis of
amylum, sucrose, maltose, and lactose. Medically, when the term glucose is used, the D-isomer is
meant to be the biologically active isomer. Glucose contains four chiral centers (numbers 2,3,4,5)
and so has 24 or 16 optical isomers. Glucose is the most important monosaccharide, found in the
bloodstream and tissue fluids. It requires no digestion and can be given intravenously. The
presence of glucose in
Fructose, a ketohexose, is often called levulose or fruit sugar. It can be prepared by the hydrolysis
of sucrose (a disaccharide) and inulin (a polysaccharide). The chemical structure of fructose is
similar to glucose, carbon atom number 3 to 6 is the same. Therefore, osazones produced from
glucose and fructose are identical. Fructosemia is an inherited disease due to a deficiency of the
H O H 2C – H C C - CHO HC C - CHO
O O
Hydroxymethylfurfural Furfural
The effect of alkali. In the alkali solution, aldose and ketose will be converted to reactive enol.
Enol form of glucose, fructose, and mannose is similar.
Formation of osazones. When a solution of a reducing sugar is heated with phenylhydrazine,
yellow crystalline compounds called osazones are formed. Each individual sugar will give rise to
an osazones which is typical for that sugar. Glucose and fructose yield the same osazones because
of similarities of their molecule structures. Maltose and lactose yield maltosazone and lactosazone.
Non-reducing sugars like the disaccharide sucrose cannot form osazone due to the absence of a
free carbonyl (CHO or C = O) group in them.
DISACCHARIDES
Maltose contains 2 molecules of glucose with a C1-4 bond. It can be prepared by the hydrolysis
of amylum using the enzyme amylase/ptyalin or diastase. Hydrolysis of maltose using acids or
maltase yields 2 molecules of glucose which can reduce Benedict's solution since the free carbonyl
group is presence at the C1 atom. Maltose can form osazones and can be fermented.
Sucrose is also known as cane sugar. It is produced commercially from sugar cane and sugar beets.
When sucrose is hydrolyzed using acids or the enzyme sucrase (invertase), it forms a mixture of
glucose and fructose. This 50:50 mixture of glucose and sucrose is called inverted sugar because
it reverses the rotation of polarized light. Sucrose does not possess a free carbonyl group (non-
reducing sugar). The linkage in sucrose is 1,2 glycosidic linkage because it occurs between C1 of
the glucose molecule and C2 of the fructose. Sucrose produces osazones but cannot be fermented.
Lactose commonly known as milk sugar, is present in milk. Hydrolysis of lactose using acids or
enzyme lactase yields glucose and galactose. The linkage in lactose is 1,4 glycosidic linkages
between C1 of the glucose molecule and C4 of the galactose molecule. Lactose is a reducing sugar.
It forms osazones and can be fermented.
Trehalose yields 2 molecules of glucose when hydrolyzed. The linkage in trehalose is 1,1
glycosidic linkages between C1 of the two glucose molecules. Trehalose is a non-reducing sugar.
It cannot form osazones.
POLYSACCHARIDES
Polysaccharides are polymers of monosaccharides. Polysaccharides have high molecular mass, are
usually insoluble in water, and are tasteless. When starch is added to boiling water, a colloidal
dispersion is formed. Polysaccharides formed from pentoses are called pentosans, and those
formed from hexoses are called hexosans.
Amylum (starch) is a glucose. It is the most important source of carbohydrates and is found in
cereals, potatoes, legumes, and other vegetables. The 2 chief constituents are amylose (15-20%)
which has a non-branching helical structure and amylopectin (80-85%) which consists of a
branched-chain composed of 24-30 glucose residues united by 1,4 linkages in the chains and by
1,6 linkages at the branch points. Starch yields only glucose on hydrolysis by acids but yields
maltose on hydrolysis by the enzyme amylase. Starch gives a characteristic deep blue color with
iodine. Amylose gives blue color with iodine whereas amylopectin gives purple color. These
colors will disappear on heating but appear again on cooling. If alkali is added, the color will
disappear because alkali binds iodium. Amylum is a non-reducing sugar, it cannot form osazones.
When amylum is hydrolyzed, it forms dextrins (amylodextrin, erythrodextrin, achroodextrin), then
maltose, and finally glucose. Erythrodextrin turns red in the presence of iodine but both maltose
and glucose produce no color. Thus, it is possible to follow the hydrolysis of the starch by
observing the changing colors when iodine is added.
Dextran is produced by certain bacteria when they are grown on sucrose. Medically, dextrans are
used as blood extenders to hold water in the bloodstream and help prevent drops in blood volume
and blood pressure.
Dextrins are produced during the hydrolysis of starch. Amylodextrin, erythrodextrin and
achroodextrin give colors of blue, red, and colorless, respectively.
Glycogen is the storage of polysaccharides in the animal body. It is a more highly branched
structure than amylopectin. Glycogen is glucose in which chains of 10-18 glucose residues in 1,4
glycosidic linkage with branching by means of 1,6 glycosidic linkage. Hydrolysis of glycogen with
acid yields glucose, and hydrolysis with amylase yields maltose. Glycogen is a non-reducing sugar,
gives a red color with iodine, cannot form osazones, and can be precipitated by the addition of
saturated ammonium sulfate.
Cellulose consists of a large number of β-glucose units joined together in a chain by 1,4 glycosidic
linkages. It is the chief constituent of the framework of plants. Cellulose cannot be digested by
mammals including humans, since the absence of a hydrolase that attacks the β-linkage. In the gut
of ruminants and other herbivores, there are microorganisms that produce enzyme with the ability
to attack α-linkage, making cellulose available as a major source of calories for the animals.
Inulin is a fructose found in tuber a root of dahlia. In the medical field, it has been used to determine
the rate of glomerular filtration.
PROTEIN
Proteins are polymers of amino acids, which are linked to each other with peptide linkage. Amino
acids are the building blocks of proteins. There are only twenty kinds of amino acid as the building
blocks of protein molecules. They are glycine, alanine, valine, leucine, isoleucine, serine,
threonine, tyrosine, phenylalanine, tryptophan, aspartic acid, glutamic acid, lysine, arginine,
histidine, cysteine, methionine, asparagine, proline, and hydroxyproline.
Essential amino acids, also known as indispensable amino acids, are amino acids that humans and
other vertebrates cannot synthesize from metabolic intermediates. These amino acids must be
supplied from an exogenous diet because the human body lacks the metabolic pathways required
to synthesize these amino acids. In nutrition, amino acids are classified as either essential or non-
essential. These classifications resulted from early studies on human nutrition, which showed that
specific amino acids were required for growth or nitrogen balance even when there is an adequate
amount of alternative amino acids. Although variations are possible depending on the metabolic
state of an individual, the common thought is that there are nine essential amino acids, including
phenylalanine, valine, tryptophan, threonine, isoleucine, methionine, histidine, leucine, and lysine.
LIPID
Lipids are important dietary constituents not only because of their high energy value but also
because of the fat-soluble vitamins and the essential fatty acids contained in the fat of natural
foods. The term lipid is applied to a group of natural substances characterized by their insolubility
in water and their solubility in such fat solvents as ether, chloroform, boiling alcohol, and benzene.
They are limited to substances that are utilizable by the animal organism. Individual members of
this group show large individual variations in solubility, but as a class, the lipids are readily
distinguishable from the carbohydrates and the proteins, the other to great groups of naturally
occurring compounds. Chemically, the lipids are either esters of fatty acids or substances capable
of forming such esters. They are very widespread in nature, being found in all vegetable and animal
matter. Some members of this group, such as the phosphatides and sterols, are found in all living
cells where, with the proteins and carbohydrates, they form an essential part of a colloidal complex
of protoplasm. Complex lipids are also found in large quantities in brain and nervous tissues, thus
indicating the important role these substances must play in the living organism. Other lipids, such
as fats and oils, represent the chief form in which excess nutrients are stored in the animal body.
They arise from ingested lipids and from the metabolism of carbohydrates and proteins and are
stored in fat deposits, such as in the subcutaneous connective tissue, in the intermuscular
connective tissue, in the omentum, in the perirenal fat depots, and in the genital fat.
CLASSIFICATION
Simple Lipids
The simple lipids are esters of fatty acids with certain alcohols. They are usually further classified
according to the nature of the alcohols, as follows:
1. Fats and Oils. Esters of fatty acids and glycerol. Oils are fats that are liquid at room
temperature.
2. Waxes. Esters of fatty acids with long-chain aliphatic alcohols or with cyclic alcohols. These
may be subdivided into (1) True waxes; (2) Cholesterol esters; (3) Vitamin A and its carotenol
esters; and (4) Vitamin D esters.
.
Derived Lipids
The derived lipids are substances formed in the hydrolysis of simple or compound lipids which
still retain the properties of this class of compound.
1. Fatty Acids. Saturated and unsaturated acids.
2. Alcohols. Compounds of high molecular eight but not glycerol. These may be classified as
follows:
a. Aliphatic Alcohols such as cetyl, stearyl, and myricyl.
b. Sterols that contain the phenanthrene nucleus (cholesterol, ergosterol, sitosterol,
stigmasterol).
c. Alcohols Containing the B-Ionone Ring. These include vitamin A.
3. Hydrocarbons. Compounds having no carboxyl or alcohol groups, and which cannot be
saponified.
a. Aliphatic Hydrocarbons
b. Carotenoids.
c. Squalene.
4. Lipid soluble vitamins (A, D, E, and K) and hormones
Rancid
When fat is allowed to stand for a sufficient length of time in contact with air and moisture,
particularly in the presence of light and heat, certain changes occur and it becomes rancid. Three
types of rancidity have been described; namely, oxidative, ketonic, and hydrolytic. The first is
the most important in the spoilage of fat. Rancid fats are unpalatable and appear to be slightly
toxic for some individuals and destructive to other factors in the food such as carotene and
vitamin A and vitamin E.
Emulsions
Emulsions when oil or liquid fat is shaken with water, it become finely divided and is dispersed
in the water to form what is known as an emulsion. Emulsification with water alone is of course
inefficient and transitory. In the presence of emulsifying agents dispersion of fat globules is more
complete and hence more permanent. Among the important emulsifying agents are soaps,
proteins, and bile salts.
Saponification
C3H5(OOCC5H31)3 + 3NaOH → C3H5(OH)3 + 3C15H31COONa
Formation of Acrolein
The glycerol of the fat is dehydrated and acrylic aldehyde or acrolein is produced. This is the
reaction which takes place:
B. LESSON PLAN
EXPERIMENT IN PROTEIN
Experiment 1 (Color reaction for protein: Millon-Nasse Reaction)
Procedure
1. Add 2 mL of dilute protein solution and 1 mL of mercuric sulfate reagent (1% of HgSO4
in 10% of sulphuric acid).
2. Heat the tube until a yellow precipitate occurs
3. Cool down with running tap water.
4. Add 1 mL 1% NaNO2.
5. Heat again; the appearance of a deep red color indicates tyrosine or other 3,5-
unsubstituted phenol.
Procedure
Place 3 mL of protein solution and a few drops of fresh sodium hypobromine solution, and mix
thoroughly. From this mixed solution, will nitrogen gas leave the solution?
Note: This reaction is also positive for urea and ammonium salts in any substance
EXPERIMENTS IN LIPIDS
Experiment 1 Unsaturated fatty acid (Iodine absorption test)
Procedure
1. Add 10 mL of chloroform in a test tube and 10 drops of Hubl’s iodine solution. The color of
the chloroform will turn pink, because of the free Iodine.
2. Distribute the solution into four test tubes. Label each tube.
3. To each tube different types of oils: coconut oil, peanut oil, sesame oil, or fat animal. Add drop
by drop and mix every time after adding oils into the tube.
4. Count how many drops of the oil are needed to eliminate the pink color. What is the result and
compare the degree of saturation between those oils and fat?
Chloroform
Sulphuric acid
Carbohydrate Results
Experiment 1
Experiment 2
Experiment 3
Protein
Experiment 1
Experiment 2
Experiment 3
Lipids
Experiment 1
Experiment 2
ASSESSMENT
1. Students must write a report and submit the report within one week after the practical session.
2. Students are required to take this practicum as a component of formative assessment and a
requirement to participate in a summative assessment at the end of the semester exam.
3. Summative assessment is integrated into the block cumulative exam and end-of-semester exam.
Well done aspect From Student: What was the best and most memorable
during the practicum?
Aspects that can be improve From Student: What should be improved regarding this
practicum?
Very Satisfactory*