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    122 2022 4131 Moesm7 Esm

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    Pranav Kumar Singh
    The document summarizes datasets used in studies of gene expression changes in rice under biotic and abiotic stress. It includes two tables: (a) provides details of the stress types, datasets, and references for each study, and (b) lists the differentially expressed genes found across all studies, including the rice cultivar, sample details, log-ratio, p-value, and FDR for each gene. A total of 118 differentially expressed genes were found under biotic stress and 58 under heat stress.

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    122 2022 4131 Moesm7 Esm

    Uploaded by

    Pranav Kumar Singh
    7 views48 pages
    The document summarizes datasets used in studies of gene expression changes in rice under biotic and abiotic stress. It includes two tables: (a) provides details of the stress types, datasets, and references for each study, and (b) lists the differentially expressed genes found across all studies, including the rice cultivar, sample details, log-ratio, p-value, and FDR for each gene. A total of 118 differentially expressed genes were found under biotic stress and 58 under heat stress.

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    The document summarizes datasets used in studies of gene expression changes in rice under biotic and abiotic stress. It includes two tables: (a) provides details of the stress types, datasets, and references for each study, and (b) lists the differentially expressed genes found across all studies, including the rice cultivar, sample details, log-ratio, p-value, and FDR for each gene. A total of 118 differentially expressed genes were found under biotic stress and 58 under heat stress.

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    © All Rights Reserved
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    7 views48 pages

    122 2022 4131 Moesm7 Esm

    Uploaded by

    Pranav Kumar Singh
    The document summarizes datasets used in studies of gene expression changes in rice under biotic and abiotic stress. It includes two tables: (a) provides details of the stress types, datasets, and references for each study, and (b) lists the differentially expressed genes found across all studies, including the rice cultivar, sample details, log-ratio, p-value, and FDR for each gene. A total of 118 differentially expressed genes were found under biotic stress and 58 under heat stress.

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    of 48

    Supplementary Table 7: (a) Table with summary of information of datasets used, stress causing agent, referen

    dataset used in the study of finding common differentially expressed genes between biotic and abiotic stress (
    the differentially expressed genes with FDR less than 0.05 and fold change ≥ 2 were categorized as DEGs. A t
    58 DEGs in heat stress studies were found.
    (a)
    Stress Type Dataset NStress caused by Disease caused
    1 Magnaporthe oryzae Blast
    2 Rhizoctonia solani Rice sheat blight
    3 Rhizoctonia solani Rice sheat blight
    4 Rhizoctonia solani Rice sheat blight
    5 Rhizoctonia solani Rice sheat blight
    6 Rhizoctonia solani Rice sheat blight
    7 Rhizoctonia solani Rice sheat blight
    8 Rhizoctonia solani Rice sheat blight
    10 Rhizoctonia solani Rice sheat blight
    Biotic stress

    11 Rhizoctonia solani Rice sheat blight


    12 Burkholderia glumae interaction Bacterial panicle blight
    13 Burkholderia glumae interaction Bacterial panicle blight
    14 Magnaporthe grisea Blast fungus
    15 Magnaporthe grisea Blast fungus
    16 Striga hermonthica Root hemiparasite
    17 Striga hermonthica Root hemiparasite
    19 Striga hermonthica Root hemiparasite
    20 Striga hermonthica Root hemiparasite
    21 Magnaporthe oryzae Rice blast
    22 Magnaporthe oryzae Rice blast
    23 Magnaporthe oryzae Rice blast
    24 Heat stress
    25 Heat stress
    26 Heat stress
    27 Heat stress
    28 Heat stress
    29 Heat stress
    Heat stress

    30 Heat stress, 30min


    31 Heat stress, 45min
    32 Heat stress, 105min
    33 Heat stress, 105min
    34 Heat stress, 135min
    35 Heat stress, 150min
    36 Heat stress, 150min
    37 Heat stress, 225 min

    References:
    1 Hu W, Hu G, Han B (2009) Genome-wide survey and expression profiling of heat shock proteins and heat s
    2 Jain P, Singh PK, Kapoor R, et al (2017) Understanding Host-Pathogen Interactions with Expression Profilin
    3 Liao J-L, Zhou H-W, Peng Q, et al (2015) Transcriptome changes in rice (Oryza sativa L.) in response to high
    4 Liu Z, Zhao J, Li Y, et al (2012) Non-Uniform Distribution Pattern for Differentially Expressed Genes of Tran
    5 Magbanua Z v, Arick M, Buza T, et al (2014) Transcriptomic dissection of the rice – Burkholderia glumae in
    6 Marcel S, Sawers R, Oakeley E, et al (2010) Tissue-Adapted Invasion Strategies of the Rice Blast Fungus Ma
    7 Ribot C, Hirsch J, Balzergue S, et al (2008) Susceptibility of rice to the blast fungus, Magnaporthe grisea. J P
    8 Swarbrick PJ, Huang K, Liu G, et al (2008) Global patterns of gene expression in rice cultivars undergoing a
    9 Wilkins O, Hafemeister C, Plessis A, et al (2016) EGRINs (Environmental Gene Regulatory Influence Netwo
    10 Zhang J, Chen L, Fu C, et al (2017) Comparative Transcriptome Analyses of Gene Expression Changes Trigg
    s used, stress causing agent, reference and other information about each
    between biotic and abiotic stress (b) Table with expression profile of all
    e ≥ 2 were categorized as DEGs. A total of 118 DEGs in biotic stress and
    studies were found.
    (b)
    Samples info Rice type used References
    12DPI PB1 Jain et al. 2017
    12DPI Lemont Zhang et al. 2017
    12DPI Teqing Zhang et al. 2017
    24DPI Lemont Zhang et al. 2017
    24DPI Teqing Zhang et al. 2017
    36DPI Lemont Zhang et al. 2017
    36DPI Teqing Zhang et al. 2017
    48DPI Lemont Zhang et al. 2017
    72DPI Lemont Zhang et al. 2017
    72DPI Teqing Zhang et al. 2017
    Pooled sample CLEARFIELD 151 Magbanua et al. 2014
    Pooled sample CLEARFIELD 161 Magbanua et al. 2014
    3DPI Nipponbare Ribot et al. 2008
    4DPI Nipponbare Ribot et al. 2008
    2DPI IAC 165 Swarbrick et al. 2008
    4DPI IAC 165 Swarbrick et al. 2008
    11DPI IAC 165 Swarbrick et al. 2008
    11DPI Nipponbare Swarbrick et al. 2008
    2DPI Nipponbare Marcel et al. 2010
    4DPI Nipponbare Marcel et al. 2010
    6DPI Nipponbare Marcel et al. 2010
    Zhonghua 11 Hu et al. 2009
    Minghui 63 (MH63) Liu et al. 2012
    Moroberekan Li et al. 2015
    N22 Li et al. 2015
    Sensitive RIL line Liao et al . 2015
    Tolerant RIL line Liao et al . 2015
    Kinandang Wilkins et al. 2016
    Padan wangi Wilkins et al. 2016
    Azucena Wilkins et al. 2016
    Pandan Wilkins et al. 2016
    Tadukan Wilkins et al. 2016
    Kinandang Wilkins et al. 2016
    Tadukan Wilkins et al. 2016
    Azucena Wilkins et al. 2016
    of heat shock proteins and heat shock factors revealed overlapped and stress specific respo
    eractions with Expression Profiling of NILs Carrying Rice-Blast Resistance Pi9 Gene. Frontie
    Oryza sativa L.) in response to high night temperature stress at the early milky stage. B
    rentially Expressed Genes of Transgenic Rice Huahui 1 at Different Developmental Stag
    the rice – Burkholderia glumae interaction. BMC Genomics 15:755. https://doi.org/10.1
    tegies of the Rice Blast Fungus Magnaporthe oryzae . The Plant Cell 22:3177–3187. https://doi.org/10.1105/tpc.110.078048
    st fungus, Magnaporthe grisea. J Plant Physiol 165:114–124. https://doi.org/10.1016/j.jp
    sion in rice cultivars undergoing a susceptible or resistant interaction with the parasiti
    Gene Regulatory Influence Networks) in Rice That Function in the Response to Water Deficit, High Temperature, and Agricultu
    of Gene Expression Changes Triggered by Rhizoctonia solani AG1 IA Infection in Resistant an
    Table with expression profile of all the differentially expressed genes with FDR less than 0.05 and fold chang

    Rice cultivar used/samples info Log-ratio p-value miniFDR

    7.66206759214 2.405701642E-05 0.0039540300872


    4.20579719543 8.003903511E-09 6.709192079E-05
    PB1, 12DPI

    3.86133241653 3.620621389E-05 0.004484081554


    2.61212134361 0.0022707806134 0.0313481413274
    2.36211109161 0.0001335956035 0.0075404414012
    2.31066977978 2.855713196E-06 0.0015748506772
    2.01289772987 8.158523519E-07 0.0008280433232

    3.05805230141 2.46749422E-05 0.0026931671288


    Lemont, 12DPI

    2.84246468544 2.080855067E-06 0.0012169199303


    2.52116107941 5.033634767E-05 0.0034082342548
    2.30430650711 1.542023332E-06 0.0011540943197
    -2.047262907 0.0015128997636 0.0192303801492
    -2.4004685879 0.0052895380411 0.0426911454611

    4.17948555946 5.566347116E-05 0.008817193364


    Teqing, 12DPI

    2.58683657646 0.0004557665803 0.0179072905274

    -2.7954483032 0.0001402618828 0.0112999769024

    5.0166580677 7.187123144E-05 0.0014426566342


    4.95306158066 2.43739126E-06 0.0003269638779
    4.49962711334 1.082181144E-05 0.0005976304338
    4.09319448471 3.566321243E-06 0.0003774536766
    4.05086028576 0.0009696788159 0.0070643453034
    3.81630325317 0.0001372362123 0.0020601160925
    3.66143369675 0.0002219281551 0.0027276987793
    3.57250928879 8.544650576E-05 0.0015734771306
    3.47051286697 5.075242864E-07 0.0002170546724
    3.20430207253 0.0001956002392 0.0025251061215
    2.96391952038 0.001573329548 0.0099115268326
    2.90681004524 6.336599725E-06 0.0004768035326
    2.88470825553 0.0002607606035 0.003000490541
    2.75923538208 0.0002091735514 0.0026462064255
    2.73342728615 0.0002368840331 0.0028342231211
    2.73178553581 0.0001814032262 0.0024228718975
    emont, 24DPI
    Lemont, 24DPI
    2.719186306 0.0031645927064 0.0166542452926
    2.658411026 0.003742756428 0.0189360704264
    2.63169050217 0.0010751945617 0.0075864569814
    2.59240007401 2.512389176E-05 0.0008782256476
    2.59214544296 0.0002417726161 0.0028684119544
    2.59156560898 0.0001079445798 0.0017853880151
    2.58585330844 5.552602026E-05 0.0012706167892
    2.44517087936 9.862533186E-05 0.0016931855931
    2.43017625809 5.200861017E-05 0.0012371083254
    2.41874456406 0.0001246918921 0.001950032307
    2.39496996999 0.0025287488143 0.014054737051
    2.2833647728 2.932854882E-05 0.0009312258622
    2.2744294405 6.915553594E-05 0.0014145665312
    2.20735836029 0.0003283484425 0.0034778215621
    2.19054377079 0.0019570538734 0.0116125464189
    2.10120272636 0.0002043759025 0.0026051711762
    2.08917212486 0.0001622908928 0.0022620338879
    2.03102588654 0.0005365756124 0.004779799589
    2.02822947502 0.0020287476025 0.0119348004532
    2.0137783289 0.001411844776 0.0091684595992
    -3.10166049 4.470782367E-05 0.0011451214245

    6.35298459232 0.010216454428 0.0433348889773


    5.41848373413 0.0002907311115 0.0039551886861
    5.38436806202 1.241233864E-05 0.0008307438918
    4.71626901627 2.757931578E-05 0.0012078414662
    4.62131798267 1.673603832E-07 0.0001732005784
    4.18974561989 0.006596335289 0.0310705332247
    4.06799125671 3.463521155E-05 0.0013484570676
    4.02648663521 0.0001707786464 0.0029060798328
    3.77622181177 1.944058586E-06 0.0003989453084
    3.64704155922 0.0002341701973 0.0034840402238
    3.46077871323 0.0001615498008 0.0028287209218
    3.06250369549 4.035048292E-05 0.0014319808978
    3.05194139481 0.0001699517878 0.0028990717657
    3.04779523611 0.0073881652884 0.0337975096667
    Teqing, 24DPI

    3.00803649426 0.0001111147838 0.002318722288


    2.93900156021 9.661371645E-06 0.0007531627111
    2.86518287659 8.676316308E-06 0.0007243859942
    2.84049272537 3.958428891E-06 0.0005027794659
    2.65103912354 0.0007964524678 0.0072110251991
    2.55091547966 3.571873136E-05 0.0013609486078
    2.51682381332 0.0002873239839 0.0039366861113
    2.41872639954 0.0005821962969 0.0059938617529
    2.36892652512 0.0050400474723 0.0254954548306
    2.36643373966 4.735417872E-05 0.0015445201078
    2.327003479 0.0096305410378 0.0413912883148
    2.22633673064 2.885565478E-05 0.001234749894
    2.18532037735 0.0013737387491 0.0102667864572
    2.13780784607 7.007408439E-05 0.001845305422
    2.0845913887 0.0001677603798 0.0028809793759
    2.0489127636 0.0007527709879 0.0069811073579
    -2.5984327793 2.370647708E-06 0.0004139941114
    -4.2858037949 0.0013855118401 0.0103142297017

    6.05780887604 4.92329305E-05 0.005957707191


    5.93736553192 4.944567444E-05 0.005957707191
    5.09044742584 0.0001853910114 0.0093615759899
    4.74845194817 0.0030452803538 0.0324810142116
    4.0602478981 2.530346982E-05 0.0048439406195
    3.89227700233 0.0012018043998 0.0201560728304
    3.5882114172 0.0009778301239 0.0185358734296
    3.57972080261 0.001597016937 0.0232733566973
    3.38989877701 0.0023324974997 0.0280837791456
    Lemont, 36DPI

    3.36841535568 0.0010575175729 0.0191442203061


    3.2555782795 0.00014667517 0.0085978317814
    3.10805821419 0.0031588895038 0.0329991331171
    3.05933666229 1.838968519E-05 0.0043300476733
    2.90302598476 0.0014455822217 0.0220667963862
    2.6735663414 0.0050648347519 0.0432248735737
    2.6485376358 0.0006243608705 0.015250720604
    2.55431246758 0.0013147891154 0.0209845549903
    2.13481247425 0.0060688452359 0.0477397600461
    2.06165266037 4.193916753E-05 0.0057141316285
    2.00853827596 0.0004636226596 0.0133779903871
    -2.3370299339 0.0003268992578 0.0117062518996
    -3.1833930016 2.480562958E-05 0.004791030171
    -3.5942089558 4.814066692E-05 0.005916925607

    6.64335031807 9.34073581E-05 0.0123498081782


    2.97983956337 4.584017637E-05 0.0097033003632
    2.78611779213 0.0003368665797 0.0183360416728
    Teqing, 36DPI

    2.46394109726 0.0004581356753 0.0206356929819


    2.39645624161 1.84630271E-06 0.0071029103291
    2.29110097885 0.0003013339277 0.0174440712416
    -2.0461373329 6.00775525E-06 0.0072163455755
    -2.4995622635 0.0003606927322 0.0189974326736
    -2.9596805573 0.0001040769979 0.0127790299542
    -3.3085284233 5.570283663E-05 0.0107035582684

    5.44110417366 6.73685714E-05 0.0015205890705


    5.37437915802 3.99397539E-06 0.0005865936361
    4.96748733521 1.616877751E-05 0.0008800854582
    4.38417720795 4.080802161E-07 0.000418636812
    3.99459695816 6.789950738E-06 0.0006771932078
    3.6710267067 2.895832022E-08 0.000293589189
    3.49527788162 0.0001123142745 0.0019508147004
    3.48320007324 0.0008686189755 0.0064954417612
    3.44061112404 0.0004625763047 0.004355150103
    ont, 48DPI
    3.43819725513 0.0085718219813 0.0351700639139

    Lemont, 48DPI
    3.42900800705 0.0010074464253 0.007184634095
    3.36352539063 0.0002963577765 0.0033254742275
    3.16201329231 0.0001028478389 0.0018649825186
    3.11661612988 0.0005294776662 0.0047356952508
    2.75118708611 1.608204661E-05 0.0008776638441
    2.40576851368 0.004434384111 0.0210503915349
    2.38808655739 0.0005235370855 0.0047016255255
    2.35285079479 2.913893791E-05 0.0011001258771
    2.3155637458 0.0013091653501 0.0086110700178
    2.22263813019 0.0015446833795 0.0096792753103
    2.20678162575 0.000172937569 0.0024487024972
    2.14540493488 0.0002298938812 0.0028702151764
    2.04999494553 0.0002181684824 0.0027869178405
    2.00344920158 0.0004590428738 0.0043303169536

    5.81233136356 3.228535871E-05 0.005048101247


    5.29480953515 0.0001299510928 0.0068843825683
    5.22005701065 0.0011776556424 0.0162361523966
    3.87339019775 4.839264107E-06 0.0038960650758
    3.83685445786 0.0001126970953 0.0067666453673
    3.68501168489 0.0033990249072 0.0291084244267
    3.51264834404 8.524536156E-05 0.0061776368061
    3.40048348904 3.602957441E-05 0.005138976463
    Teqing, 48DPI

    3.166639328 0.0002385762543 0.0082843479469


    2.89354892075 0.0002993031578 0.0089477624401
    2.81074666977 0.0004127255494 0.0101336574272
    2.77863454819 0.0014918937414 0.0183611889101
    2.60344541073 0.0013473611594 0.0174808616131
    2.50055038929 0.0012832221289 0.0170467213525
    2.37389975786 3.526809693E-05 0.005138976463
    2.3199608326 0.0012802924258 0.0170344025379
    2.07071828842 0.0003094311973 0.009089176125
    2.04592061043 5.073128248E-05 0.0053965723641
    2.00121247768 0.001295154106 0.0171020212839
    -2.9095249176 0.0001476636194 0.0071465099495

    4.96192479134 0.0003104724116 0.0125729807641


    4.3611574173 7.150983764E-07 0.0023212390526
    3.67579174042 4.752854583E-05 0.0072562108053
    3.66637611389 3.721198431E-06 0.004584768358
    Lemont, 72DPI

    2.8615694046 0.003299965871 0.0404055418016


    2.85328197479 0.0011433937378 0.0235141895676
    2.70587491989 0.0013617741256 0.0256746186018
    2.68432426453 6.292084201E-05 0.0075175602952
    2.51501226425 0.0026238474894 0.0357047714203
    2.45466351509 0.0032520074452 0.0400641199424
    2.33040583134 0.0017912004002 0.0294287695696
    2.13457489014 0.0041561211787 0.0461801036169
    -2.2323834002 8.329467732E-05 0.0080730860797
    4.18445079029 0.0021448668819 0.0423597987339

    Teqing, 72DPI
    3.59645104408 0.0005980640648 0.0251157283537
    3.51855039597 0.0027118938652 0.0473006957835
    2.79144716263 0.0004994573015 0.0237975600259
    2.64138376713 0.0018441283714 0.039525575136
    2.30027341843 0.0005205754314 0.0242086363476

    6.81079754233 3.530002952E-06 2.795840392E-05


    6.23764204979 1.378488649E-07 3.048824078E-06
    5.96200895309 0.0001046614803 0.0004260825187
    5.63477826118 5.28836621E-06 3.799862928E-05
    5.22715312243 9.302309345E-06 5.926104108E-05
    4.64504957199 8.087054078E-09 6.33093801E-07
    4.40346005559 2.183117995E-05 0.000116869437
    4.04202067852 4.411716025E-07 6.380973131E-06
    4.00008821487 1.167988854E-08 7.496592471E-07
    3.72214251757 4.45726665E-06 3.340654432E-05
    3.33618688583 8.332228497E-07 9.863977251E-06
    2.97497561947 1.841980817E-05 0.0001018559639
    2.93147754669 1.876666311E-08 1.007064052E-06
    2.88988143206 1.250985679E-06 1.310923208E-05
    2.57214903831 1.839297198E-08 9.934101051E-07
    2.55893170834 7.531401778E-07 9.237814203E-06
    2.51986250281 9.375952654E-06 5.95943172E-05
    2.51375150681 6.814993072E-10 2.462327497E-07
    2.50796842575 2.532617609E-07 4.422794551E-06
    2.49409817904 0.0001780705041 0.0006687536708
    Clearfield 151

    2.38275694847 2.356430792E-08 1.144178754E-06


    2.38134342432 2.458033936E-07 4.35153561E-06
    2.31314444542 1.234909313E-05 7.385490741E-05
    2.25218427181 2.332163189E-06 2.046600158E-05
    2.10136950016 0.0003840895334 0.0013022132766
    2.05547094345 9.446399208E-08 2.463705561E-06
    2.05243396759 9.006559934E-07 1.041619591E-05
    2.01222157478 5.069786599E-08 1.72191974E-06
    -2.106906414 1.842911284E-07 3.6117034E-06
    -2.1641683578 3.05118698E-07 5.001225995E-06
    -2.2959535122 6.857705583E-06 4.677615349E-05
    -2.3192822933 6.836371275E-06 4.666582783E-05
    -2.4220557213 1.063499358E-06 1.166932677E-05
    -2.4268922806 3.013036356E-07 4.956137353E-06
    -2.6441867352 8.852520746E-07 1.028630024E-05
    -2.715433836 7.706542387E-07 9.359507521E-06
    -2.7770779133 7.58565967E-07 9.274508987E-06
    -2.9380671978 2.803060388E-06 2.348214396E-05
    -2.9497907758 5.46053636E-06 3.892210883E-05
    -2.9780011177 3.723790083E-07 5.70020051E-06
    -3.3056178093 7.13294145E-08 2.082230096E-06
    -3.6903662682 4.343392183E-10 2.15510767E-07
    -4.2812278271 4.105138411E-10 2.090472173E-07

    6.910412848 2.604783617E-21 2.144826934E-19


    5.00070951879 1.948587218E-14 3.97804128E-13
    4.83249735832 4.956422521E-25 1.081945733E-22
    4.01883172989 1.408697092E-30 1.686894644E-27
    3.6943757534 2.84478073E-23 3.624025834E-21
    3.39976787567 2.464305199E-27 1.14759955E-24
    3.30604195595 3.305957288E-19 1.68974734E-17
    2.83808612823 3.09375864E-18 1.287642623E-16
    2.8186237812 1.634077008E-23 2.290549684E-21
    2.70613288879 5.421784121E-13 8.542775041E-12
    2.53011870384 2.96656947E-20 1.912486315E-18
    Clearfield 161

    2.38854312897 2.398191961E-26 8.238772251E-24


    2.36086675525 2.224266908E-14 4.483168607E-13
    2.30785322189 2.007395471E-29 1.790084234E-26
    2.15152674913 1.511100516E-10 1.625596633E-09
    2.12566238642 4.447787138E-13 7.146292465E-12
    2.05802953243 1.078462696E-10 1.183259908E-09
    -2.0347565413 4.560784122E-13 7.287517504E-12
    -2.0570909977 4.675869539E-21 3.609116835E-19
    -2.1571195126 5.081829808E-18 2.049948517E-16
    -2.1982084513 5.03993942E-15 1.137501028E-13
    -2.2908263206 3.759235831E-29 3.21545086E-26
    -3.0608584285 7.588804186E-19 3.585816923E-17
    -3.1163547039 2.601341494E-26 8.652970214E-24
    -3.785969615 2.316357414E-22 2.345004153E-20

    5.00564956665 7.650364349E-08 6.105737127E-05


    3.87418365479 1.709680561E-08 3.491912058E-05
    3.69941139221 5.109247543E-06 0.0007463607059
    3.43307685852 4.270546125E-07 0.0001624893143
    3.27185153961 5.886775544E-08 5.66550204E-05
    Japonica, 3DPI

    3.20447349548 1.529245798E-07 9.623073267E-05


    3.14148139954 3.407436588E-05 0.0026486673658
    2.91855812073 2.104853046E-06 0.000428678526
    2.88514328003 1.668860982E-06 0.0003872941068
    2.72039604187 5.234323301E-06 0.0007550727734
    2.5564622879 2.642398453E-06 0.0004885003512
    2.30754470825 1.131986184E-05 0.0012598929219
    2.29845714569 6.558518577E-07 0.0002124830147
    2.25855636597 1.203097706E-05 0.0013101885156

    7.90646839142 8.058238659E-10 2.831490474E-06


    7.87884616852 5.451659792E-10 2.831490474E-06
    7.12583732605 4.630646352E-08 7.850984971E-06
    5.85480213165 3.36083643E-09 2.97978161E-06
    5.1447467804 2.03696372E-07 1.730134296E-05
    5.09223365784 4.96613164E-08 8.073342911E-06
    4.6817150116 2.535810506E-07 1.993106344E-05
    4.52708244324 5.162906673E-08 8.073342911E-06
    4.29424571991 2.914829666E-05 0.0005038513277
    4.28411960602 9.874801956E-06 0.0002499019873
    4.26057052612 2.005323905E-06 8.521845303E-05
    4.25970077515 5.339156534E-08 8.073342911E-06
    4.22812080383 2.25426239E-07 1.816846648E-05
    4.15811538696 3.113216688E-07 2.246596907E-05

    Japonica, 4DPI
    3.82846260071 1.332863127E-06 6.320861917E-05
    3.77587795258 8.569938346E-08 1.051071624E-05
    2.9622631073 2.051672865E-07 1.730279369E-05
    2.91611099243 8.111976401E-06 0.0002215693588
    2.88352966309 3.774805624E-06 0.000131030825
    2.84781074524 3.863401145E-06 0.0001327763393
    2.68021392822 2.833461899E-05 0.000495016232
    2.41401767731 1.715296137E-05 0.0003526156973
    2.33498573303 3.481457545E-06 0.000123557759
    2.28329563141 5.817591383E-06 0.0001756453401
    2.23597335815 2.054526565E-06 8.667591794E-05
    2.22824573517 2.813185635E-05 0.0004922623547
    2.15961742401 2.545908145E-06 0.0001010637285
    2.02054595947 6.85987114E-05 0.0009069442563
    -2.0802555084 9.122987072E-05 0.0011023721676
    -2.3152284622 0.0007828801569 0.0051243325676
    -2.3563594818 1.682666835E-05 0.0003484824314
    -2.5906600952 4.322597759E-05 0.0006581677366

    165 (root)/ 2DPI 3.37007331848 9.358379504E-06 0.0057060338377

    5.17258358002 2.522886631E-06 0.0009712223099


    (root)/ 2DPI

    3.2378578186 7.469228931E-06 0.0015468867664


    IAC165

    2.43943500519 3.923297614E-06 0.0011258451785


    2.00085639954 0.0009541015352 0.0161846088316
    -2.0034179688 1.707602434E-06 0.000812023721

    4.85479068756 3.86890046E-07 0.0005754461857


    IAC165
    (root)/

    3.02532863617 3.626568391E-07 0.0005650884327


    4DPI

    2.63163471222 2.183863786E-06 0.0014250693678


    2.4755191803 3.444286534E-06 0.0018773101043

    4.54357719421 5.61877323E-07 0.000590556691


    2.5509223938 1.665969541E-06 0.0006900835929
    IAC 165
    (Root)/
    11DPI

    2.53114032745 1.197942446E-06 0.000673837111


    2.21957111359 1.183234767E-05 0.0010666062826
    2.05522727966 7.630014146E-06 0.0009426684621

    3.29296779633 4.842161199E-05 0.0144763866135


    Nipponbare

    2.83247566223 4.976527945E-06 0.0044629639672


    (Root)/
    11DPI

    2.45176315308 1.916493939E-05 0.0085732385516


    2.27603435516 0.0002178735205 0.032405715179
    2.0437335968 1.267914612E-05 0.0064826096771
    6.63174819946 3.105507456E-07 0.0003043014132
    4.37736320496 1.60685454E-05 0.001555606339
    4.00867271423 3.211021372E-06 0.0006517862654
    3.75280094147 2.548859296E-05 0.0021440558838
    3.68762016296 7.883145889E-05 0.004439798619
    3.20276927948 6.671887901E-05 0.0040354439165
    2.97900295258 8.112876386E-06 0.0010492867237
    Nipponbare, roots 2dpi 2.84025382996 5.837885332E-06 0.000892650859
    2.79919624329 0.0001966881209 0.0078790970156
    2.66196918488 3.266699698E-06 0.0006517862654
    2.61415290833 1.246902636E-05 0.0013246022301
    2.58358383179 5.610262319E-06 0.0008746355552
    2.48185920715 7.693548473E-06 0.0010246887346
    2.46186733246 6.421801937E-06 0.0009465504638
    2.45748329163 4.482294604E-05 0.0030556175842
    2.29319381714 0.0005553662531 0.0145265343994
    2.28131961823 0.0001453485537 0.0064445736763
    2.23563194275 6.829160563E-05 0.0040852612785
    2.15518951416 0.0001287296709 0.0060175604147
    2.12858009338 0.001958393686 0.0315522196921
    2.06538963318 7.311095947E-05 0.0042465432095
    2.04562950134 0.0036896406023 0.0458709801625
    2.01793670654 9.740340435E-05 0.0050190142293
    Nipponbare, 4dpi

    3.2960319519 6.703388247E-07 0.0016872943863


    2.669880867 3.655091071E-07 0.001229885307
    2.05170631409 2.186171349E-06 0.0019334026722
    Nipponbare, 6dpi

    3.61740875244 0.0016133851538 0.0498725644688


    3.20381832123 0.0008822856762 0.0383147461047
    2.81684112549 5.009447862E-05 0.011462877829
    2.63259506226 0.000400803375 0.0269857778526
    2.36111545563 0.0009963199184 0.0406355264476
    2.33940029144 0.0003375354219 0.025078581606

    4.64730453491 1.957256783E-10 5.085326133E-07


    3.97145938873 9.473512212E-09 3.63656511E-06
    3.71136760712 4.886102347E-07 2.858016159E-05
    3.09207057953 1.925765741E-08 4.961803667E-06
    2.75967884064 7.216524996E-08 9.630470871E-06
    2.7584400177 2.200134931E-07 1.743167438E-05
    2.72512531281 1.30010802E-07 1.308988758E-05
    2.70024776459 3.773592177E-05 0.000515787315
    Zhonghua 11, seedlings HS

    2.62642478943 9.777016542E-06 0.0002019719288


    2.42994022369 5.064676911E-05 0.0006359415115
    2.29088687897 4.771157165E-05 0.0006103276183
    2.17540359497 5.677926333E-07 3.129055214E-05
    2.16416072845 1.812268463E-07 1.589840446E-05
    2.11892414093 7.353967679E-06 0.0001660707594
    Zhonghua 11, seed
    2.09375762939 1.529788782E-06 5.938048463E-05
    2.04526901245 6.030378072E-06 0.000144455367
    2.03689670563 5.494857206E-07 3.091828874E-05
    2.0291557312 0.0001798119999 0.0016164308412
    -2.0457954407 0.0001726506524 0.0015666873679
    -2.134396553 2.830429058E-08 5.899191061E-06
    -2.1648178101 2.527535364E-07 1.905668484E-05
    -2.687417984 3.083142756E-07 2.146523346E-05
    -2.9404830933 6.935029378E-06 0.0001584873642
    -4.0541343689 1.220881388E-07 1.279986323E-05

    3.3637714386 2.027250806E-10 4.499378797E-08


    3.34666442871 3.555628308E-08 8.370307158E-07
    2.97787666321 4.250378095E-08 9.410072531E-07
    2.97105026245 7.608675593E-10 8.717747608E-08
    2.83041763306 3.017694644E-08 7.441221111E-07
    2.75060653687 3.783376526E-09 2.037283981E-07
    2.42048168182 5.006464256E-09 2.405602399E-07
    2.38303852081 4.038396905E-09 2.121098291E-07
    2.36504554749 4.911627404E-09 2.36854084E-07
    2.32059288025 1.145200238E-07 1.871790319E-06
    2.30021190643 4.009385589E-09 2.11874733E-07
    2.28096485138 2.161954273E-07 2.96784145E-06
    2.14742660522 8.018136037E-07 8.242835294E-06
    2.13784790039 5.72587707E-07 6.359882874E-06
    Minghui 63 (MH63)

    2.13609695435 2.656652102E-07 3.49187356E-06


    2.09666633606 1.540934545E-08 4.864152706E-07
    2.08406639099 1.737230483E-08 5.273251936E-07
    2.03041267395 1.978971708E-07 2.767346677E-06
    2.00547218323 2.38677706E-08 6.460959528E-07
    -2.1466236115 1.336539626E-08 4.48083669E-07
    -2.1730928421 1.468581145E-08 4.718237896E-07
    -2.20175457 4.628888181E-08 9.971460109E-07
    -2.2129306793 4.742798583E-09 2.34078213E-07
    -2.3055553436 3.46150359E-09 1.92304449E-07
    -2.3083639145 1.130576667E-08 4.047563426E-07
    -2.3808145523 9.73663332E-09 3.720486722E-07
    -2.39503479 3.789737982E-09 2.037283981E-07
    -2.5396986008 1.466071656E-06 1.328886336E-05
    -2.5705022812 1.630307239E-08 5.037480027E-07
    -2.7580118179 1.164986029E-08 4.11670333E-07
    -3.2260847092 4.074797461E-10 6.666776126E-08
    -3.7247600555 2.929344391E-10 5.612175711E-08
    -3.8184919357 1.237879774E-09 1.125163943E-07
    -4.8898839951 9.317036528E-11 3.600150387E-08
    Moroberekan
    2.58958530426 4.955602239E-08 4.222384378E-05

    2.14786434174 2.422290151E-06 0.0004081393163

    N22
    -2.1682929993 5.912599961E-07 0.0001429053792

    3.55188655853 0.0013854023043 0.0428831804971


    (milky stage)
    Sensitive ril

    3.13698577881 0.0010180999304 0.0390836878666


    rice line

    2.35361969471 0.0006089972396 0.0332915613795


    2.29401469231 5.23538423E-05 0.0218074002069
    2.00781726837 0.000760707252 0.03504009264

    line (milky stage)


    Tolerant ril rice

    2.86090183258 0.0001540224379 0.0218826725964

    5.83176058531 7.576306544E-11 8.831484679E-09


    4.07097864151 1.063001294E-21 1.937065662E-18
    3.07326889038 1.286029932E-17 8.292321001E-15
    Kinandang

    2.34999227524 6.442389942E-15 2.142963867E-12


    2.09967470169 1.445883833E-16 6.733320355E-14
    -2.3455599546 1.032915253E-06 3.087099205E-05
    -2.5094109774 5.990525528E-12 9.510413103E-10
    -2.7674198151 1.79981937E-11 2.583357172E-09
    -2.7858264446 3.538579104E-10 3.378335476E-08

    4.92153573036 0.0012542504237 0.0365227141304


    Padan wangi

    4.01274108887 1.516237567E-07 0.0002269591033


    3.47441101074 3.993906974E-06 0.0013796671986
    3.00018215179 1.118818177E-08 3.920100167E-05
    2.87006559968 1.678042657E-05 0.0032864543853
    2.36624979973 7.300054637E-06 0.0020397325997
    AAzucena

    2.68014240265 9.449517042E-11 2.329695049E-07


    2.46764469147 1.206270677E-08 1.123493703E-05
    -2.013771534 8.684669218E-08 5.515028125E-05

    Pandan 2.55928182602 5.128503856E-06 0.0238828726256


    Tadukan
    2.13958120346 3.263889498E-06 0.0016481462243
    -2.3637485504 6.872760176E-07 0.0005143770081

    Kinandang
    -2.0762343407 9.557550282E-13 2.945412113E-10
    -2.6206715107 1.088315217E-13 3.833064484E-11

    Tadukan
    2.02236437798 0.000133330338 0.0365237981996
    -2.3330512047 0.0002008565191 0.0397089548441

    Azucena 2.11428117752 0.0004603886254 0.0438486070919


    ess than 0.05 and fold change ≥ 2 were categorized as DEGs. A total of 118 DEGs in biotic stress and 58 DEGs in heat stre

    Locus id

    LOC_Os12g36400
    LOC_Os12g37110
    LOC_Os04g02880
    LOC_Os12g16080
    LOC_Os02g47600
    LOC_Os03g57680
    LOC_Os12g16290

    LOC_Os02g46030
    LOC_Os04g02880
    LOC_Os02g45460
    LOC_Os04g02050
    LOC_Os02g47470
    LOC_Os03g48780

    LOC_Os02g46030
    LOC_Os04g02050

    LOC_Os02g47470

    LOC_Os03g57640
    LOC_Os02g48320
    LOC_Os12g36850
    LOC_Os12g38170
    LOC_Os02g45880
    LOC_Os12g36830
    LOC_Os02g45780
    LOC_Os02g47650
    LOC_Os02g47090
    LOC_Os02g48190
    LOC_Os03g63390
    LOC_Os02g47660
    LOC_Os02g48194
    LOC_Os04g06520
    LOC_Os12g36910
    LOC_Os03g63270
    LOC_Os02g46910
    LOC_Os12g16720
    LOC_Os04g07110
    LOC_Os04g05650
    LOC_Os04g02050
    LOC_Os02g46930
    LOC_Os12g36735
    LOC_Os02g48210
    LOC_Os03g57880
    LOC_Os02g45810
    LOC_Os12g36840
    LOC_Os02g45710
    LOC_Os02g47100
    LOC_Os12g36880
    LOC_Os12g38010
    LOC_Os02g47450
    LOC_Os02g46860
    LOC_Os02g48200
    LOC_Os02g47810
    LOC_Os04g07260
    LOC_Os02g46839

    LOC_Os12g36840
    LOC_Os03g57640
    LOC_Os03g63390
    LOC_Os02g47650
    LOC_Os02g48190
    LOC_Os03g48770
    LOC_Os02g45780
    LOC_Os02g47660
    LOC_Os02g48320
    LOC_Os12g16720
    LOC_Os02g47090
    LOC_Os02g46910
    LOC_Os02g48210
    LOC_Os04g03164
    LOC_Os02g45880
    LOC_Os02g45810
    LOC_Os03g48660
    LOC_Os04g05650
    LOC_Os03g57880
    LOC_Os04g02050
    LOC_Os02g48194
    LOC_Os02g48280
    LOC_Os02g48200
    LOC_Os02g46650
    LOC_Os12g38170
    LOC_Os02g46680
    LOC_Os02g46860
    LOC_Os12g37360
    LOC_Os02g48110
    LOC_Os02g47640
    LOC_Os02g47620
    LOC_Os02g46839

    LOC_Os12g36850
    LOC_Os12g36830
    LOC_Os12g36880
    LOC_Os03g57640
    LOC_Os12g38170
    LOC_Os12g36860
    LOC_Os02g45880
    LOC_Os03g48770
    LOC_Os02g46910
    LOC_Os02g47650
    LOC_Os02g47660
    LOC_Os12g37690
    LOC_Os04g02050
    LOC_Os03g63390
    LOC_Os12g16720
    LOC_Os12g38150
    LOC_Os04g02880
    LOC_Os02g47370
    LOC_Os02g46930
    LOC_Os04g03164
    LOC_Os02g45450
    LOC_Os02g46980
    LOC_Os02g47510

    LOC_Os03g48770
    LOC_Os03g48780
    LOC_Os12g16720
    LOC_Os12g38150
    LOC_Os04g02880
    LOC_Os02g47840
    LOC_Os02g47620
    LOC_Os02g46980
    LOC_Os02g47510
    LOC_Os02g47470

    LOC_Os03g57640
    LOC_Os12g36850
    LOC_Os12g36830
    LOC_Os12g36880
    LOC_Os03g57880
    LOC_Os12g38170
    LOC_Os02g47650
    LOC_Os12g16720
    LOC_Os12g37690
    LOC_Os12g38010
    LOC_Os02g46910
    LOC_Os02g45780
    LOC_Os12g36860
    LOC_Os02g45880
    LOC_Os02g48320
    LOC_Os02g47370
    LOC_Os02g48190
    LOC_Os02g48280
    LOC_Os03g48770
    LOC_Os02g47090
    LOC_Os02g47660
    LOC_Os03g63390
    LOC_Os12g36750
    LOC_Os12g15920

    LOC_Os12g36840
    LOC_Os03g48770
    LOC_Os03g57640
    LOC_Os12g37690
    LOC_Os02g47650
    LOC_Os12g38010
    LOC_Os12g16720
    LOC_Os02g46910
    LOC_Os02g47090
    LOC_Os02g48280
    LOC_Os12g38150
    LOC_Os02g48210
    LOC_Os02g45880
    LOC_Os02g48190
    LOC_Os02g48320
    LOC_Os02g47660
    LOC_Os02g47840
    LOC_Os03g48780
    LOC_Os12g36680
    LOC_Os02g47470

    LOC_Os03g57640
    LOC_Os12g36880
    LOC_Os12g36830
    LOC_Os12g36850
    LOC_Os12g16720
    LOC_Os04g02050
    LOC_Os12g38170
    LOC_Os03g57880
    LOC_Os02g45780
    LOC_Os12g37690
    LOC_Os02g45880
    LOC_Os02g47650
    LOC_Os02g45450
    LOC_Os12g36840
    LOC_Os12g16720
    LOC_Os02g47650
    LOC_Os02g48210
    LOC_Os02g48190
    LOC_Os02g47840

    LOC_Os12g36850
    LOC_Os12g36880
    LOC_Os03g48770
    LOC_Os12g36830
    LOC_Os04g05650
    LOC_Os03g57640
    LOC_Os03g48760
    LOC_Os03g58010
    LOC_Os04g02640
    LOC_Os12g37690
    LOC_Os04g02754
    LOC_Os12g36860
    LOC_Os04g02050
    LOC_Os12g37320
    LOC_Os12g36910
    LOC_Os02g48080
    LOC_Os04g06590
    LOC_Os12g37260
    LOC_Os04g06520
    LOC_Os02g48330
    LOC_Os12g38180
    LOC_Os02g48320
    LOC_Os02g45780
    LOC_Os02g47090
    LOC_Os02g45880
    LOC_Os12g38170
    LOC_Os12g16720
    LOC_Os02g46610
    LOC_Os04g07280
    LOC_Os04g07830
    LOC_Os12g37900
    LOC_Os04g07920
    LOC_Os04g07130
    LOC_Os02g47790
    LOC_Os02g46210
    LOC_Os02g45620
    LOC_Os02g46980
    LOC_Os04g02880
    LOC_Os12g38140
    LOC_Os03g57780
    LOC_Os12g36810
    LOC_Os02g46910
    LOC_Os02g47470

    LOC_Os12g36850
    LOC_Os03g48770
    LOC_Os12g36830
    LOC_Os12g36880
    LOC_Os04g05650
    LOC_Os12g16720
    LOC_Os03g58010
    LOC_Os04g04950
    LOC_Os04g02754
    LOC_Os03g48760
    LOC_Os03g57640
    LOC_Os04g02050
    LOC_Os02g48330
    LOC_Os12g37260
    LOC_Os04g04980
    LOC_Os02g47090
    LOC_Os02g45880
    LOC_Os04g02550
    LOC_Os02g46680
    LOC_Os03g48600
    LOC_Os03g48810
    LOC_Os04g05050
    LOC_Os03g57780
    LOC_Os02g47420
    LOC_Os12g36810

    LOC_Os12g37690
    LOC_Os12g36910
    LOC_Os12g36850
    LOC_Os02g45780
    LOC_Os02g47470
    LOC_Os03g57640
    LOC_Os12g36830
    LOC_Os04g03164
    LOC_Os12g36920
    LOC_Os04g06520
    LOC_Os12g36940
    LOC_Os02g45940
    LOC_Os02g46030
    LOC_Os02g46910

    LOC_Os02g46030
    LOC_Os03g57640
    LOC_Os12g37690
    LOC_Os02g45780
    LOC_Os04g03164
    LOC_Os12g16720
    LOC_Os12g36910
    LOC_Os02g46500
    LOC_Os12g36850
    LOC_Os12g36830
    LOC_Os02g48210
    LOC_Os02g48190
    LOC_Os02g47370
    LOC_Os02g46910
    LOC_Os02g47470
    LOC_Os02g45760
    LOC_Os03g48660
    LOC_Os12g36920
    LOC_Os04g06520
    LOC_Os02g46990
    LOC_Os02g48330
    LOC_Os03g63270
    LOC_Os02g47580
    LOC_Os02g47200
    LOC_Os04g06590
    LOC_Os03g58010
    LOC_Os03g57880
    LOC_Os02g46460
    LOC_Os04g02620
    LOC_Os02g47744
    LOC_Os02g46750
    LOC_Os04g02880

    LOC_Os12g36880

    LOC_Os12g36880
    LOC_Os12g36830
    LOC_Os12g36850
    LOC_Os04g06520
    LOC_Os03g57980

    LOC_Os12g36880
    LOC_Os04g04360
    LOC_Os04g06520
    LOC_Os12g36830

    LOC_Os12g36880
    LOC_Os12g36830
    LOC_Os12g16720
    LOC_Os12g36850
    LOC_Os04g03164

    LOC_Os04g04360
    LOC_Os04g06520
    LOC_Os12g16720
    LOC_Os12g36830
    LOC_Os12g36910
    LOC_Os02g45450
    LOC_Os02g45780
    LOC_Os02g47470
    LOC_Os02g47090
    LOC_Os03g58110
    LOC_Os02g45420
    LOC_Os12g36910
    LOC_Os02g46100
    LOC_Os02g48200
    LOC_Os12g36830
    LOC_Os02g46210
    LOC_Os02g48190
    LOC_Os02g46910
    LOC_Os04g02910
    LOC_Os04g03164
    LOC_Os02g46500
    LOC_Os12g16720
    LOC_Os12g36850
    LOC_Os02g46930
    LOC_Os12g15920
    LOC_Os12g16010
    LOC_Os12g36840
    LOC_Os02g45750

    LOC_Os12g16720
    LOC_Os04g03164
    LOC_Os12g36830

    LOC_Os12g36840
    LOC_Os12g36830
    LOC_Os12g16720
    LOC_Os02g45450
    LOC_Os12g36850
    LOC_Os04g03164

    LOC_Os02g46030
    LOC_Os03g63330
    LOC_Os02g46473
    LOC_Os04g06590
    LOC_Os02g46970
    LOC_Os02g47090
    LOC_Os02g48140
    LOC_Os12g36850
    LOC_Os02g47840
    LOC_Os12g36830
    LOC_Os03g48780
    LOC_Os12g36860
    LOC_Os03g57880
    LOC_Os12g36880
    LOC_Os04g02640
    LOC_Os03g58170
    LOC_Os12g38010
    LOC_Os03g48710
    LOC_Os03g57970
    LOC_Os02g47470
    LOC_Os12g36940
    LOC_Os04g07260
    LOC_Os03g63200
    LOC_Os02g45520

    LOC_Os03g57840
    LOC_Os02g48210
    LOC_Os12g16540
    LOC_Os12g36850
    LOC_Os02g48100
    LOC_Os12g36830
    LOC_Os03g63400
    LOC_Os04g05010
    LOC_Os12g16524
    LOC_Os04g02880
    LOC_Os12g36880
    LOC_Os02g46990
    LOC_Os12g36860
    LOC_Os03g63260
    LOC_Os02g46440
    LOC_Os02g45920
    LOC_Os03g48920
    LOC_Os12g36910
    LOC_Os04g06770
    LOC_Os02g46340
    LOC_Os02g46970
    LOC_Os03g48270
    LOC_Os04g02050
    LOC_Os02g45930
    LOC_Os02g45520
    LOC_Os12g37650
    LOC_Os02g45690
    LOC_Os02g47660
    LOC_Os02g47470
    LOC_Os03g48300
    LOC_Os02g45670
    LOC_Os02g46660
    LOC_Os02g47200
    LOC_Os02g46030
    LOC_Os02g48140

    LOC_Os02g48140
    LOC_Os02g46480

    LOC_Os03g48750
    LOC_Os02g46360
    LOC_Os02g47470
    LOC_Os12g16690
    LOC_Os03g57880

    LOC_Os12g16690

    LOC_Os02g48140
    LOC_Os03g58170
    LOC_Os04g05010
    LOC_Os02g47110
    LOC_Os02g48110
    LOC_Os12g36830
    LOC_Os02g46970
    LOC_Os12g36880
    LOC_Os04g02880

    LOC_Os02g48140
    LOC_Os03g58170
    LOC_Os04g05010
    LOC_Os02g48110
    LOC_Os12g38140
    LOC_Os12g17160

    LOC_Os04g05010
    LOC_Os03g58170
    LOC_Os12g36880

    LOC_Os04g05010
    LOC_Os03g58170
    LOC_Os04g02880

    LOC_Os12g36880
    LOC_Os04g02880

    LOC_Os03g58170
    LOC_Os04g02880

    LOC_Os04g05010
    fold change ≥ 2 were categorized as DEGs. A total of 118 DEGs in biotic stress and 58 DEGs in heat stress studies were fo

    Gene name

    transposon protein, putative, Pong sub-class, expressed


    OsFBD16 - F-box and FBD domain containing protein, expressed
    expressed protein
    expressed protein
    soluble inorganic pyrophosphatase, putative, expressed
    aldehyde oxidase, putative, expressed
    isoflavone reductase, putative, expressed

    MYB family transcription factor, putative, expressed


    expressed protein
    expressed protein
    bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed
    cytochrome P450, putative, expressed
    Cupin domain containing protein, expressed

    MYB family transcription factor, putative, expressed


    bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed

    cytochrome P450, putative, expressed

    gibberellin receptor GID1L2, putative, expressed


    DNA binding protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    osmotin, putative, expressed
    expressed protein
    pathogenesis-related Bet v I family protein, putative, expressed
    zinc finger, C3HC4 type domain containing protein, expressed
    universal stress protein domain containing protein, putative, expressed
    peptide transporter PTR2, putative, expressed
    expressed protein
    plastocyanin-like domain containing protein, putative, expressed
    basic helix-loop-helix, putative, expressed
    expressed protein
    expressed protein
    calmodulin binding protein, putative, expressed
    regulatory protein, putative, expressed
    glycosyl hydrolases family 16, putative, expressed
    cytochrome P450 71A1, putative, expressed
    expressed protein
    expressed protein
    bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed
    jmjC domain containing protein, expressed
    expressed protein
    lectin-like protein kinase, putative, expressed
    glucan endo-1,3-beta-glucosidase precursor, putative, expressed
    WD domain, G-beta repeat domain containing protein, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    zinc finger, C3HC4 type domain containing protein, expressed
    expressed protein
    pathogenesis-related Bet v I family protein, putative, expressed
    metallothionein, putative, expressed
    expressed protein
    oligopeptide transporter 4, putative, expressed
    lectin-like protein kinase, putative, expressed
    dof zinc finger domain containing protein, putative, expressed
    expressed protein
    expressed protein

    pathogenesis-related Bet v I family protein, putative, expressed


    gibberellin receptor GID1L2, putative, expressed
    plastocyanin-like domain containing protein, putative, expressed
    universal stress protein domain containing protein, putative, expressed
    expressed protein
    Cupin domain containing protein, expressed
    zinc finger, C3HC4 type domain containing protein, expressed
    basic helix-loop-helix, putative, expressed
    DNA binding protein, putative, expressed
    cytochrome P450 71A1, putative, expressed
    peptide transporter PTR2, putative, expressed
    glycosyl hydrolases family 16, putative, expressed
    lectin-like protein kinase, putative, expressed
    expressed protein
    expressed protein
    WD domain, G-beta repeat domain containing protein, expressed
    DUF1336 domain containing protein, expressed
    expressed protein
    glucan endo-1,3-beta-glucosidase precursor, putative, expressed
    bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed
    expressed protein
    expressed protein
    lectin-like protein kinase, putative, expressed
    ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed
    osmotin, putative, expressed
    multidrug resistance protein, putative, expressed
    oligopeptide transporter 4, putative, expressed
    miro, putative, expressed
    DnaK family protein, putative, expressed
    OsFBT4 - F-box and tubby domain containing protein, expressed
    hydrolase, alpha/beta fold family domain containing protein, expressed
    expressed protein

    pathogenesis-related Bet v I family protein, putative, expressed


    pathogenesis-related Bet v I family protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    gibberellin receptor GID1L2, putative, expressed
    osmotin, putative, expressed
    pathogenesis-related protein 10, putative, expressed
    expressed protein
    Cupin domain containing protein, expressed
    glycosyl hydrolases family 16, putative, expressed
    universal stress protein domain containing protein, putative, expressed
    basic helix-loop-helix, putative, expressed
    MYB family transcription factor, putative, expressed
    bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed
    plastocyanin-like domain containing protein, putative, expressed
    cytochrome P450 71A1, putative, expressed
    osmotin, putative, expressed
    expressed protein
    transcription factor TF2, putative, expressed
    jmjC domain containing protein, expressed
    expressed protein
    dehydration-responsive element-binding protein, putative, expressed
    pentatricopeptide, putative, expressed
    9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed

    Cupin domain containing protein, expressed


    Cupin domain containing protein, expressed
    cytochrome P450 71A1, putative, expressed
    osmotin, putative, expressed
    expressed protein
    universal stress protein domain containing protein, putative, expressed
    hydrolase, alpha/beta fold family domain containing protein, expressed
    pentatricopeptide, putative, expressed
    9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed
    cytochrome P450, putative, expressed

    gibberellin receptor GID1L2, putative, expressed


    pathogenesis-related Bet v I family protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    glucan endo-1,3-beta-glucosidase precursor, putative, expressed
    osmotin, putative, expressed
    universal stress protein domain containing protein, putative, expressed
    cytochrome P450 71A1, putative, expressed
    MYB family transcription factor, putative, expressed
    metallothionein, putative, expressed
    glycosyl hydrolases family 16, putative, expressed
    zinc finger, C3HC4 type domain containing protein, expressed
    pathogenesis-related protein 10, putative, expressed
    expressed protein
    DNA binding protein, putative, expressed
    transcription factor TF2, putative, expressed
    expressed protein
    expressed protein
    Cupin domain containing protein, expressed
    peptide transporter PTR2, putative, expressed
    basic helix-loop-helix, putative, expressed
    plastocyanin-like domain containing protein, putative, expressed
    expressed protein
    laccase precursor protein, putative, expressed

    pathogenesis-related Bet v I family protein, putative, expressed


    Cupin domain containing protein, expressed
    gibberellin receptor GID1L2, putative, expressed
    MYB family transcription factor, putative, expressed
    universal stress protein domain containing protein, putative, expressed
    metallothionein, putative, expressed
    cytochrome P450 71A1, putative, expressed
    glycosyl hydrolases family 16, putative, expressed
    peptide transporter PTR2, putative, expressed
    expressed protein
    osmotin, putative, expressed
    lectin-like protein kinase, putative, expressed
    expressed protein
    expressed protein
    DNA binding protein, putative, expressed
    basic helix-loop-helix, putative, expressed
    universal stress protein domain containing protein, putative, expressed
    Cupin domain containing protein, expressed
    expressed protein
    cytochrome P450, putative, expressed

    gibberellin receptor GID1L2, putative, expressed


    pathogenesis-related Bet v I family protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    cytochrome P450 71A1, putative, expressed
    bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed
    osmotin, putative, expressed
    glucan endo-1,3-beta-glucosidase precursor, putative, expressed
    zinc finger, C3HC4 type domain containing protein, expressed
    MYB family transcription factor, putative, expressed
    expressed protein
    universal stress protein domain containing protein, putative, expressed
    dehydration-responsive element-binding protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    cytochrome P450 71A1, putative, expressed
    universal stress protein domain containing protein, putative, expressed
    lectin-like protein kinase, putative, expressed
    expressed protein
    universal stress protein domain containing protein, putative, expressed

    pathogenesis-related Bet v I family protein, putative, expressed


    pathogenesis-related Bet v I family protein, putative, expressed
    Cupin domain containing protein, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    expressed protein
    gibberellin receptor GID1L2, putative, expressed
    Cupin domain containing protein, expressed
    acetyltransferase, GNAT family, putative, expressed
    3-ketoacyl-CoA synthase 6, putative, expressed
    MYB family transcription factor, putative, expressed
    amidase family protein, putative, expressed
    pathogenesis-related protein 10, putative, expressed
    bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed
    lipoxygenase 2.2, chloroplast precursor, putative, expressed
    calmodulin binding protein, putative, expressed
    cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed
    expressed protein
    lipoxygenase 2.1, chloroplast precursor, putative, expressed
    expressed protein
    3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed
    heat shock cognate 70 kDa protein 2, putative, expressed
    DNA binding protein, putative, expressed
    zinc finger, C3HC4 type domain containing protein, expressed
    peptide transporter PTR2, putative, expressed
    expressed protein
    osmotin, putative, expressed
    cytochrome P450 71A1, putative, expressed
    zinc-binding protein, putative, expressed
    AGAP002737-PA, putative, expressed
    expressed protein
    expressed protein
    expressed protein
    expressed protein
    monodehydroascorbate reductase, putative, expressed
    DUF581 domain containing protein, expressed
    DUF623 domain containing protein, expressed
    pentatricopeptide, putative, expressed
    expressed protein
    expressed protein
    protein kinase, putative, expressed
    polygalacturonase, putative, expressed
    glycosyl hydrolases family 16, putative, expressed
    cytochrome P450, putative, expressed

    pathogenesis-related Bet v I family protein, putative, expressed


    Cupin domain containing protein, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    expressed protein
    cytochrome P450 71A1, putative, expressed
    acetyltransferase, GNAT family, putative, expressed
    copper methylamine oxidase precursor, putative, expressed
    amidase family protein, putative, expressed
    Cupin domain containing protein, expressed
    gibberellin receptor GID1L2, putative, expressed
    bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed
    3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed
    lipoxygenase 2.1, chloroplast precursor, putative, expressed
    pyridoxal-dependent decarboxylase protein, putative, expressed
    peptide transporter PTR2, putative, expressed
    expressed protein
    expressed protein
    multidrug resistance protein, putative, expressed
    domain of unknown function DUF966 domain containing protein, expressed
    nucleobase-ascorbate transporter, putative, expressed
    pectate lyase precursor, putative, expressed
    protein kinase, putative, expressed
    ATROPGEF7/ROPGEF7, putative, expressed
    polygalacturonase, putative, expressed

    MYB family transcription factor, putative, expressed


    calmodulin binding protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    zinc finger, C3HC4 type domain containing protein, expressed
    cytochrome P450, putative, expressed
    gibberellin receptor GID1L2, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    expressed protein
    calmodulin binding protein, putative, expressed
    expressed protein
    calmodulin binding protein, putative, expressed
    Core histone H2A/H2B/H3/H4 domain containing protein, putative, expressed
    MYB family transcription factor, putative, expressed
    glycosyl hydrolases family 16, putative, expressed
    4dpi jap
    MYB family transcription factor, putative, expressed
    gibberellin receptor GID1L2, putative, expressed
    MYB family transcription factor, putative, expressed
    zinc finger, C3HC4 type domain containing protein, expressed
    expressed protein
    cytochrome P450 71A1, putative, expressed
    calmodulin binding protein, putative, expressed
    U-box, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    lectin-like protein kinase, putative, expressed
    expressed protein
    transcription factor TF2, putative, expressed
    glycosyl hydrolases family 16, putative, expressed
    cytochrome P450, putative, expressed
    chitin-inducible gibberellin-responsive protein 2, putative, expressed
    DUF1336 domain containing protein, expressed
    calmodulin binding protein, putative, expressed
    expressed protein
    AAA-type ATPase family protein, putative, expressed
    3-hydroxy-3-methylglutaryl-coenzyme A reductase, putative, expressed
    regulatory protein, putative, expressed
    expressed protein
    transposon protein, putative, unclassified, expressed
    expressed protein
    acetyltransferase, GNAT family, putative, expressed
    glucan endo-1,3-beta-glucosidase precursor, putative, expressed
    peptide transporter PTR2, putative, expressed
    oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed
    MYB family transcription factor, putative, expressed
    expressed protein
    expressed protein

    pathogenesis-related Bet v I family protein, putative, expressed

    pathogenesis-related Bet v I family protein, putative, expressed


    pathogenesis-related Bet v I family protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    expressed protein
    LTPL99 - Protease inhibitor/seed storage/LTP family protein precursor, expressed

    pathogenesis-related Bet v I family protein, putative, expressed


    expressed protein
    expressed protein
    pathogenesis-related Bet v I family protein, putative, expressed

    pathogenesis-related Bet v I family protein, putative, expressed


    pathogenesis-related Bet v I family protein, putative, expressed
    cytochrome P450 71A1, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    expressed protein

    expressed protein
    expressed protein
    cytochrome P450 71A1, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    calmodulin binding protein, putative, expressed
    dehydration-responsive element-binding protein, putative, expressed
    zinc finger, C3HC4 type domain containing protein, expressed
    cytochrome P450, putative, expressed
    peptide transporter PTR2, putative, expressed
    uncharacterized protein At4g06744 precursor, putative, expressed
    AP2 domain containing protein, expressed
    calmodulin binding protein, putative, expressed
    RING-H2 finger protein, putative, expressed
    lectin-like protein kinase, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    DUF581 domain containing protein, expressed
    expressed protein
    glycosyl hydrolases family 16, putative, expressed
    membrane related protein CP5, putative, expressed
    expressed protein
    U-box, putative, expressed
    cytochrome P450 71A1, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    jmjC domain containing protein, expressed
    laccase precursor protein, putative, expressed
    sex determination protein tasselseed-2, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    protein kinase domain containing protein, expressed

    cytochrome P450 71A1, putative, expressed


    expressed protein
    pathogenesis-related Bet v I family protein, putative, expressed

    pathogenesis-related Bet v I family protein, putative, expressed


    pathogenesis-related Bet v I family protein, putative, expressed
    cytochrome P450 71A1, putative, expressed
    dehydration-responsive element-binding protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    expressed protein

    MYB family transcription factor, putative, expressed


    aspartokinase, chloroplast precursor, putative, expressed
    expressed protein
    expressed protein
    AMP-binding domain containing protein, expressed
    peptide transporter PTR2, putative, expressed
    hsp20/alpha crystallin family protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    universal stress protein domain containing protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    Cupin domain containing protein, expressed
    pathogenesis-related protein 10, putative, expressed
    glucan endo-1,3-beta-glucosidase precursor, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    3-ketoacyl-CoA synthase 6, putative, expressed
    stem-specific protein TSJT1, putative, expressed
    metallothionein, putative, expressed
    expressed protein
    LTPL73 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
    cytochrome P450, putative, expressed
    calmodulin binding protein, putative, expressed
    expressed protein
    powdery mildew resistance protein PM3b, putative, expressed
    uncharacterized membrane protein, putative, expressed

    peptidase M50, mammalian sterol-regulatory element binding protein, putative, expressed


    lectin-like protein kinase, putative, expressed
    OsWAK124 - OsWAK receptor-like protein OsWAK-RLP, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    DEAD-box ATP-dependent RNA helicase, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    transcription factor BTF3, putative, expressed
    CBS domain containing membrane protein, putative, expressed
    glutaredoxin-C8 precursor, putative, expressed
    expressed protein
    pathogenesis-related Bet v I family protein, putative, expressed
    AAA-type ATPase family protein, putative, expressed
    pathogenesis-related protein 10, putative, expressed
    pentatricopeptide, putative, expressed
    expressed protein
    expressed protein
    DUF1517 domain containing protein, putative, expressed
    calmodulin binding protein, putative, expressed
    argonaute, putative, expressed
    RING-H2 finger protein ATL3J, putative, expressed
    AMP-binding domain containing protein, expressed
    CAMK_CAMK_like.21 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
    bifunctional 3-phosphoadenosine 5-phosphosulfate synthetase, putative, expressed
    expressed protein
    uncharacterized membrane protein, putative, expressed
    DUF538 domain containing protein, putative, expressed
    uncharacterized mscS family protein, putative, expressed
    basic helix-loop-helix, putative, expressed
    cytochrome P450, putative, expressed
    histidine acid phosphatase, putative, expressed
    myb-like DNA-binding domain containing protein, expressed
    SNARE associated Golgi protein, putative, expressed
    transposon protein, putative, unclassified, expressed
    MYB family transcription factor, putative, expressed
    hsp20/alpha crystallin family protein, putative, expressed
    n22
    hsp20/alpha crystallin family protein, putative, expressed
    expressed protein

    Cupin domain containing protein, expressed


    invertase/pectin methylesterase inhibitor family protein, putative, expressed
    cytochrome P450, putative, expressed
    zinc finger, C3HC4 type domain containing protein, expressed
    glucan endo-1,3-beta-glucosidase precursor, putative, expressed

    zinc finger, C3HC4 type domain containing protein, expressed

    hsp20/alpha crystallin family protein, putative, expressed


    stem-specific protein TSJT1, putative, expressed
    CBS domain containing membrane protein, putative, expressed
    ADP-ribosylation factor, putative, expressed
    DnaK family protein, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    AMP-binding domain containing protein, expressed
    pathogenesis-related Bet v I family protein, putative, expressed
    expressed protein

    hsp20/alpha crystallin family protein, putative, expressed


    stem-specific protein TSJT1, putative, expressed
    CBS domain containing membrane protein, putative, expressed
    DnaK family protein, putative, expressed
    expressed protein
    flavonol sulfotransferase, putative, expressed

    CBS domain containing membrane protein, putative, expressed


    stem-specific protein TSJT1, putative, expressed
    pathogenesis-related Bet v I family protein, putative, expressed

    CBS domain containing membrane protein, putative, expressed


    stem-specific protein TSJT1, putative, expressed
    expressed protein

    pathogenesis-related Bet v I family protein, putative, expressed


    expressed protein

    stem-specific protein TSJT1, putative, expressed


    expressed protein

    CBS domain containing membrane protein, putative, expressed


    heat stress studies were found.

    Reference used
    Jain et al. 2017
    Zhnag et al. 2017
    Magbanua et al. 2014
    Ribot et al. 2008
    Swarbrick et al. 2008 Ribot et al. 2008
    Hu et al. 2009 Marcel et al. 2010
    Liu et al. 2012 Hu et al. 20
    Wilkins et al. 2016 Liao et al. 2015 Li et al. 2015
    Wilk

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