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Hawkins 1984
Hawkins 1984
Hawkins 1984
&Crystallinis a major protein product of the differ- 13-15 intervening sequences (17, 19, 20). A brief report has
entiated chicken lens. We have isolatedtwo, non-allelic indicated a close linkage of the two &crystallin genes (21).
&crystallingenes using a recombinant bacteriophage/ In thisreport, we provide evidence for the existence of only
chicken genomicDNA library. There appear be to only one &crystallin gene locus for the chicken. This locus contains
thesetwo &crystallin genes inthehaploidchicken two non-allelic b-crystallin genes oriented with a similar 5’-
genome. Southern hybridization and R-loop analyses 3’ polarity on the chromosome and separated by approxi-
indicate that the two genes are oriented on the chro- mately 4.2 kb2of DNA. Electron microscropic analysis reveals
mosome with similar5‘-3’polarity. 6 1 , arbitrarily des- at least 17 exons and 16 introns in each &crystallin gene.
ignated as the directionally5’ of the twogenes, is 6.7 We have isolated the chicken &crystallin locus from three
kilobases in length,while 6 2 is 9.2 kilobases. The two recombinant bacteriophage clones, screened from a chicken
b-crystallin genes are about 4.2 kilobases apart. Struc- genomic library. The bacteriophages gXbCr61,gXSCr65, and
turally, bothgenes are arranged in a similar and char-
acteristic pattern of 17 exons/l6 introns, as judged by gXSCr54 are overlapping. gX6Cr61 contains one gene desig-
electron microscopy. The &crystallin gene locus rep- nated 61. gX6Cr65 contains the 3’ end of 61 and the 5’ end of
resents a simple model for the study of structural co- a second gene, designated 62. gX6Cr54 contains 62. We have
evolution and/or functional co-expression of two re- also cloned several kilobases of chromosomal DNA flanking
lated geneswithin a developmentally modulated regionthe 6 1 and 62 genes.
of the genome. Our isolation and initial characterization of the d-crystallin
gene locus will facilitate detailed structural and functional
investigations pertaining to the specialization (6, 14) and
specificity (22) of b-crystallin synthesis in the chicken lens.
The crystallins comprise the major group of structural
proteins found in the vertebrate lens (1-3). There are four EXPERIMENTALPROCEDURES
immunologically distinct crystallin families ( a , p, y, and 6 ) ,
each having a particular spatial and temporal expression in Hybridization Probes-Probes used in all experiments have been
previously described in detail. The full-length &crystallin cDNA clone
the developing tissue (4-6). p8Cr17 (13) was used to screen the chicken genomic library, and 8-
&Crystallin is found only in birds and reptiles (3, 7). In the crystallin clones P1181 (16), P1188 (16), and p6Crl7 were employed
chicken, it comprises 60-80% of the protein in the embryonic for DNA blot hybridizations. Heteroduplex experiments were carried
lens and about 50% of the protein in the adult lens (8-10). out with pbCrl7.
Chicken &crystallin is a noncovalently associated poly- Screening of Phage Genomic Library-The chicken genomic library
meric protein. Typically, at least two very similar polypeptide employed for this study was generously provided by Dr. J. D. Engel
subunits combine in various assortments to compose tetra- and colleagues (23). This library was constructed from the erythrocyte
DNA of a single White Leghorn chicken. Purified DNA was partially
mers (11).Early studies, employing sodium dodecyl sulfate- digested with H a d 1 and AluI and cloned into the bacteriophage X
polyacrylamide gel electrophoresis, determined the 6-crystal- Charon 4A using synthetic EcoRI linkers. The library was screened
lin polypeptide molecular weights to be about 48,000 and at a density of 1.0 X lo4 plaques/plate by the procedure of Benton
50,000 (12). Recent cDNA sequence analysis is consistent and Davis (24).
with the presence of a b-crystallin polypeptide with a molec- DNA Blot Hybridization-Phage DNA (1.0 pg) or genomic DNA
ular weight near 48,000 (13).’ (10 pg) was digested with EcoRI. Digested DNAs were size fraction-
ated in 0.9% agarose gels using 40 mM Tris (pH 8.2), 20 mM sodium
A considerable amount of work has been directed toward acetate, 18 mM NaCl, and 2 mM EDTA as a buffer or in 5% polyac-
the study of d-crystallin nucleic acids (14). A number of 6- rylamide gels using 90 mM Tris (pH 8.4), 90 mM boric acid, and 2.4
crystallin cDNAs have been constructed for analysis (15-18), mM EDTA as a buffer. The size-fractionated DNAs were denatured,
including a full-length cDNA (13). transferred to nitrocellulose filters (25), and hybridized to nick-
Efforts to isolate &crystallin genes have yielded positive translated (26) 3ZP-labeledprobes (1.0 X lo8 cpm/pg) at 68 “C in
results. Several fragments of two non-allelic d-crystallin genes Denhardt’s solution and 6 X SSC. After hybridization, filters were
washed three times in 2 X SSC at 68 “C for a total of 3 h.
have been obtained (19, 20), and an intact b-crystallin gene Source of Chicken Genomic DNA-DNA referred to as SPAFAS
has been isolated (17). Cross-hybridization studies indicate was obtained from the pooled erythrocytes of adult inbred gs- White
that these genes are very similar (19). Both chicken 6-crys- Leghorn chickens supplied by SPAFAS Inc., Lancaster, PA. DNA
tallin genes are highly interrupted with initial estimates of referred to as USDA 6 3 was obtained from pooled, 6-12-day-old,
White Leghorn headless embryos of the extensively inbred chickens
* The costs of publication of this article were defrayed in part by supplied by the United States Department of Agriculture, East Lan-
the payment of page charges. This article must therefore be hereby sing, MI. DNA referred to as Truslow was obtained from pooled, 15-
marked “advertisement” in accordance with 18 U.S.C. Section 1734
solely to indicate this fact. * The abbreviations used are: kb, kilobase; Tricine, N-[2-hydroxy-
’ K. Yasuda and T. S. Okada, personal communication. 1,l-bis(hydroxymethyl)ethyl]-glycine.
9821
-.
HindIII and 6x174 DNA digested with
HaeIII); lane 2, pdCrl7 &-crystallin
cDNA in pBR322 digested with HindIII;
-
lane3, gXdCr61 digested with EcoRI; lane 1 2 3 4 5 kb 6 7 8 9 15 14
10 13
11 12
4, gX6Cr65 digested with EcoRI; lane 5, = - q
gX6Cr54 digested with EcoRI. Lanes 6- t 9 8 -
9,blot hybridization of lanes 2-5 using -8:7 -
32P-labeledpbCrl7 probe: lane 6 corre-
sponds to lane 2; lane 7 corresponds to 4 -5.4-
lane 3; lane 8 corresponds to lane 4; lane - - 3.8
9 corresponds to lane 5. Lunes 10-12,
blot hybridization of lanes 3-5 using 32P-
- -3.1-
labeled P1181 probe:lane 10 corresponds
to lane 3; lane 11 corresponds to lane 4;
lane 12 corresponds to lane 5. Lanes 13-
15, blot hybridization of lanes 3-5 using
3ZP-labeledP1188 probe: lane I3 corre- 0.7 -
sponds to lane 3; lane I4 corresponds to
lane 4; lane I5 corresponds to lane 5.
Sizes of principal genomic fragments are
indicated.
&Crystallin Genes 9823
dl I
kb 1 2 3
,, ., I
FIG.3. R-loop and heteroduplex analysis of recombinant 13.0-
bacteriophage clones. A, line drawing corresponding to the electron 11 .o- -c, I