Professional Documents
Culture Documents
S9 - One Carbon Metabolism and Early Development A Diet-Dependent Desti
S9 - One Carbon Metabolism and Early Development A Diet-Dependent Desti
One carbon metabolism (OCM) is critical for early development, as it provides Highlights
one carbon (1C) units for the biosynthesis of DNA, proteins, and lipids and epige- One carbon metabolism (OCM) exerts its
netic modification of the genome. Epigenetic marks established early in life can impacts on offspring development by
participation in biosynthesis, epigenetic
be maintained and exert lasting impacts on gene expression and functions
modification, and remodeling of placen-
later in life. Animal and human studies have increasingly demonstrated that tal function.
prenatal 1C nutrient deficiencies impair fetal growth, neurodevelopment, and
cardiometabolic parameters in childhood, while sufficient maternal 1C nutrient Dysregulation in maternal OCM impairs
early development, leading to abnormal-
intake is protective against these detrimental outcomes. However, recent studies ities in growth, body composition, and
also highlight the potential risk of maternal 1C nutrient excess or imbalance cardiometabolic and neurocognitive
in disrupting early development. Further studies are needed to delineate the functions in the offspring.
dose–response relationship among prenatal 1C nutrient exposure, epigenetic
Growing evidence from animal and
modifications, and developmental outcomes. human studies suggests that sufficient
maternal supply of one carbon (1C) nutri-
Importance of OCM for early development ents may overcome the adverse influ-
ence of other intrauterine exposures,
The prenatal period is characterized by rapid cellular proliferation and differentiation, which makes
such as maternal obesity and alcohol in-
it susceptible to maternal nutrient supply. OCM, including the folate cycle, methionine cycle, and take, on early development.
transsulfuration pathway, provides one carbon (1C) units that are used for the biosynthesis of
nucleic acids, proteins, and lipids required for growth and epigenetic modifications that regulate Recent research suggests the poten-
tial risk of maternal 1C nutrient ex-
gene expression (Box 1 and Figure 1) [1]. The influence of OCM on early development and fetal cess and imbalance on growth and
programming of metabolic and cognitive health later in life is studied in various animal models neurodevelopment. Further studies
and is increasingly observed in human studies (Figure 2, Key figure). to delineate the dose–response
relationship between maternal 1C
nutrient intake and offspring outcome
Nutrients, including methionine, folate (see Glossary), choline and its oxidized metabolite are urgently needed.
betaine, vitamin B12, vitamin B2, and vitamin B6, participate in OCM as methyl donors or cofactors.
While sufficient supplies of these nutrients are critical for metabolic and cognitive development,
recent research has raised the concern of excess 1C metabolites leading to growth and
neurodevelopmental abnormalities [2–7]. This review provides an overview on the mechanisms
by which OCM impacts early development and recent findings on the time-specific and dose-
dependent influence of maternal OCM on offspring developmental outcomes.
Trends in Endocrinology & Metabolism, August 2021, Vol. 32, No. 8 https://doi.org/10.1016/j.tem.2021.05.011 579
© 2021 Elsevier Ltd. All rights reserved.
Trends in Endocrinology & Metabolism
580 Trends in Endocrinology & Metabolism, August 2021, Vol. 32, No. 8
Trends in Endocrinology & Metabolism
pregnancy suppressed the expression of the antiangiogenic gene soluble fms-like tyrosine kinase
1 (sFLT1) in the placenta in humans and promoted placental angiogenesis in mice [20,21]. Better
placental angiogenesis facilitates macronutrient transport to and growth of the fetus [22]. By
contrast, maternal B12 deficiency reduced placental expression of fatty acid transporters [23],
while maternal folate deficiency inhibited placental mechanistic target of rapamycin (mTOR)
signaling and amino acid transporter expression, thereby resulting in fetal growth restriction in
rodents [24]. Interestingly, under the condition of energy excess in a mouse model of high-fat
Trends in Endocrinology & Metabolism, August 2021, Vol. 32, No. 8 581
Trends in Endocrinology & Metabolism
Key figure
Potential mechanisms by which one carbon (1C) metabolism influences
early development
Figure 2. Maternal intake of 1C nutrients may affect the status of 1C nutrients in the fetus, thereby influencing biosynthesis of
nucleic acids, proteins, and lipids and epigenetic regulation, eventually affecting cellular growth and metabolism. Maternal 1C
nutrient status may also exert its influence via the placenta by modifying mTOR pathway activity and subsequently affecting
macronutrient transport to the fetus as well as altering placental epigenetic marks, resulting in secondary epigenetic changes
in pathways that regulate growth and stress response in the fetus. These alterations in placental functions by 1C nutrients
582 Trends in Endocrinology & Metabolism, August 2021, Vol. 32, No. 8
Trends in Endocrinology & Metabolism
Influences of maternal 1C nutrient intake on the offspring epigenome and phenotypes are clearly
demonstrated in studies of viable yellow agouti mice. Supplementing 1C nutrients to dams
increased DNA methylation of the intracisternal A particle (IAP) retrotransposon at the agouti
locus, thereby reducing its expression, which in turn obviates the influence of this gene on
offspring fur coat color, food intake, and obesity [30].
Human studies have identified associations between maternal OCM and epigenetic modifications
of genes in pathways related to growth (e.g., IGF, H19, and RXRA), brain development
(e.g., BDNF), obesity and cardiometabolic function (e.g., POMC and LEP), and stress response
(e.g., NR3C1 and CRH) [18,26,29,31–34]. The relationship between maternal 1C nutrient intake
and offspring DNA methylation seems to be time specific; for example, cord blood LEP (encoding
leptin) methylation was positively associated with periconceptional folic acid (FA) supplementation
but was inversely related to second trimester folate intake [32]. The influence of maternal 1C
nutrients may also be sexually dimorphic. Caffrey et al. demonstrated in an RCT (n = 86) that
eventually affect fetal growth and metabolism. Taken together, maternal 1C metabolism programs developmental and
metabolic pathways early in life, thereby exerting lasting impacts on functional outcomes, such as neurocognitive
development, body size, and cardiometabolic differences. Abbreviations: CH3, methyl group; CRH, corticotropin-releasing
hormone; FATP, fatty acid transport protein; GLUT, glucose transporter; IGF2, insulin-like growth factor 2; mTOR,
mechanistic target of rapamycin; SAM, S-adenosylmethionine; SNAT, sodium-coupled neutral amino acid transporter.
Trends in Endocrinology & Metabolism, August 2021, Vol. 32, No. 8 583
Trends in Endocrinology & Metabolism
The drastic epigenetic remodeling renders the perinatal period a critical window for epigenetic programming by
environmental exposures, including maternal OCM [119]. The periconceptional period involves rapid demethylation of
the genome following fertilization, giving rise to cellular pluripotency. However, the imprinted genes that are expressed
in a parent-of-origin-specific manner (e.g., IGF2, H19) resist demethylation in this process. Remethylation occurs after
implantation and persists throughout pregnancy in a tissue-specific manner. The primordial germ cells in the developing
embryo undergo a second wave of genomic demethylation as they enter the genital ridge. Within this wave the imprint
marks are erased, followed by de novo methylation that establishes sex-specific imprints during gametogenesis [119].
Histone methylation, especially trimethylation at histone 3 lysine 4 (H3K4me3), helps to maintain proliferation and
pluripotency of embryonic stem cells [120].
Adequate intake of 1C nutrients influences gametogenesis and gamete stability and plays an integral role in zygogenesis
[1]. Reproductive success is known to be negatively impacted by deficiencies of 1C nutrients and can be defined by
elevated Hcy levels (≥20 mmol/L) in follicular fluid [1]. Oocyte maturation and zygotic implantation is negatively impacted
by hyperhomocysteinemia. Human embryonic stem cells require sufficient 1C nutrients to maintain H3K4me3 to remain
undifferentiated [120]
IGF2 methylation was lower in female offspring of women supplemented with 400 μg/day FA
through the second and third trimesters while BDNF methylation was lower only in the male off-
spring [31]. Although 1C nutrients provide the methyl group for DNA methylation, maternal 1C nu-
trient intake or status can be either positively or inversely associated with, or unrelated to, global
or site-specific DNA methylation (e.g., the imprinted gene IGF2 encoding insulin-like growth
factor 2) in the offspring, suggesting regulating mechanisms other than substrate provision
[18,33,34]. One potential mechanism is related to methylation of DNA methyltransferase 1
(DNMT1) by 1C nutrients, which may lower its expression and activity. Offspring DNMT1
methylation was inversely associated with FA intake up to the second trimester, yet was positively
associated with FA use that extends into the third trimester [18]. In addition, the influence of
maternal OCM is partially mediated through the placenta (Figure 2). An RCT showed that higher
maternal choline intake (930 versus 480 mg/d) in the third trimester increased NR3C1 and CRH
DNA methylation (encoding glucocorticoid receptor and corticotropin-releasing hormone,
respectively) and thus lowered corticotrophin-releasing hormone (CRH) expression in the placenta.
The decrease in placental CRH transport to the fetus may have subsequently caused decreases in
methylation of these genes in the fetal cord blood [29]. In summary, although there is a growing
584 Trends in Endocrinology & Metabolism, August 2021, Vol. 32, No. 8
Trends in Endocrinology & Metabolism
body of work interrogating the relationship between maternal OCM and offspring epigenetic
programming in humans, results are not consistent. Most of the studies are observational, with
other lifestyle factors as potential confounders, precluding the possibility to draw a causative
conclusion. There are also challenges in the accurate assessment of 1C intake using food
frequency questionnaires, while measurements of serum 1C metabolite levels may also be affected
by hemodilution during pregnancy and tissue uptake. Current studies mainly examine methylation
of a few selected loci in the genome and thus may not represent changes in the whole methylome.
Further, DNA methylation is tissue specific and subjected to dynamic changes during early
development. Whether cord blood or buccal cell DNA methylation, as measured in many studies,
reflects methylation changes in other tissues remains to be ascertained.
Intake and status of other nutrients in OCM, including vitamin B12 and choline, are also associated
with NTD risk reduction independent of folate intake or levels in both pre- and post-FA fortified
populations [14,39,40]. Polymorphisms in enzymes involved with OCM, such as MTHFR 677C>T,
MTRR 66A>G, MTHFD1 1958G>A, and BHMT 742G>A, are associated with increased risk of
NTD [14], further supporting that disturbances in OCM are detrimental to neural tube development.
Neurodevelopment
OCM has been demonstrated to affect different aspects of neurodevelopment. Both folate and
choline deficiency during late gestation reduces neurogenesis and increases apoptosis of neurons
in rodents [12,41,42]. OCM influences epigenetic modification and DNA repair of genes that are
critical for neurodevelopment [43]. OCM nutrients also affect myelination, docosahexaenoic acid
(DHA) uptake, neurotransmitter synthesis, and neuroinflammation [44].
Various behavioral studies in rodents have consistently demonstrated that high perinatal choline
intake improves offspring cognitive performance and prevents their memory decline during aging
[45]. Studies also suggest that low prenatal folate intake or Mthfr deficiency results in more anxiety
behavior and worse short-term memory in offspring [11,46]. Supplementation of 1C nutrients
reverses neural insults from other maternal exposures; prenatal choline supplementation alleviated
behavioral changes and learning and memory deficits in mice with fetal alcohol spectrum disorders
(FASD) [47] or in genetic models of autism, Down syndrome, or Alzheimer’s disease [48–50].
In humans, disturbances in OCM that lead to Hcy accumulation may impair neurodevelopment in
children (Figure 3). Maternal hyperhomocysteinemia during the periconceptional period or
early pregnancy was associated with lower psychomotor scores in infants and lower cognitive
performance and higher risk of psychological problems in childhood [51–53].
Various studies have investigated the relationship between maternal folate intake or status
and cognitive outcomes of children (Figure 3). Low maternal folate status in early pregnancy
was associated with psychological and emotional problems in two prospective cohorts
[54,55], whereas higher maternal folate status at 30 weeks of gestation was associated with
better learning, memory, and attention [56]. FA supplementation during periconception and
early pregnancy was associated with improved fetal cerebellar growth [57], improved
Trends in Endocrinology & Metabolism, August 2021, Vol. 32, No. 8 585
Trends in Endocrinology & Metabolism
Figure 3. Current human evidence regarding the time-specific associations between maternal one carbon metabolism and offspring neurocognitive
outcomes. The brackets represent the timing of exposure, and the boxes include the maternal one carbon nutrient intake or status and offspring outcomes. The
question mark represents inconsistent results across studies. Abbreviations: FA, folic acid; Hcy, homocysteine; ∝, is related to.
communication ability at 18 months [58], better verbal skills at 3–4 years [59,60], and reduced
omission error at 11 years [61] in observational studies. In two RCTs, supplementation of
400 μg of 5mTHF from gestational week 20 to delivery led to improved ability to solve conflicts
at 8.5 years (n = 136), while supplementation of 400 μg of FA from gestational week 14 to
delivery led to higher cognition scores at 3 years (n = 39), better reasoning at 7 years (n = 70),
and higher processing speed at 11 years (n = 68), respectively [62–64]. However, there are also
studies that suggest no association between folate status, intake, or supplementation and
cognitive outcomes [65,66]. Several studies have investigated the relationship between maternal
folate intake or status and autism risk in children, yet results were inconsistent, suggesting either
higher or lower risk [67–69].
Results are mixed regarding maternal B12 and cognitive development. Maternal B12 deficiency
was associated with lower cognitive performance in infants [70] and 9-year-old children [71];
yet, another two observational studies did not find an association [56,72]. An RCT (n = 178) of
586 Trends in Endocrinology & Metabolism, August 2021, Vol. 32, No. 8
Trends in Endocrinology & Metabolism
oral B12 supplementation (50 μg) from early pregnancy to 6 weeks postpartum also did not find an
effect on cognitive performance in 9-month-old infants [73].
Overall, despite promising findings between maternal 1C nutrients and offspring cognitive
outcomes in observational cohorts and small trials, large RCTs that validate the causative rela-
tionship between the two are still limited. Interpreting the relationship between maternal OCM
and offspring cognitive development is complicated by the different timing of exposure, supple-
mentation dosage, SNPs, and the different aspects of cognitive outcomes measured at varied
time points of childhood in studies. The null findings in some prospective studies may also be
related to the challenge in sensitively estimating 1C nutrient intake in free-living populations. It
should also be noted that the influence of 1C nutrients may depend on the dosage levels. The
excess of 1C nutrients, especially folate, has also been related to adverse neurodevelopmental
outcomes, which is discussed in a later section.
Early growth
OCM affects cellular biosynthesis, methylation of genes in growth-related pathways (e.g., IGF),
and placental macronutrient delivery, thereby influencing growth of the fetus (Figure 2)
[20–22,25]. Maternal supplementation of multiple 1C nutrients or betaine alone increases
fetal weight and postnatal growth performance in normal or growth-restricted prenatal
environments [80–82]. By contrast, both choline and betaine supplementation prevented fetal
overgrowth in high-fat-fed obese mouse dams [25,83].
Low maternal folate status was related to increased risk of fetal growth retardation, small for
gestational age (SGA), and lower birth weight [84]. Meta-analyses of cohort studies [85] and
RCTs [86] suggest that FA supplementation both before and after conception was associated
with lower risk of SGA. Krikke et al. showed that maternal folate levels in early pregnancy were
associated with a slight increase in body mass index (BMI) in children at 5–6 years of age,
suggesting that the positive relationship between maternal folate and growth extends beyond
the fetal period [87].
However, high supplemental folate intake along with low vitamin B12 status in the second trimes-
ter of pregnancy increases the risk of SGA in a region with high prevalence of B12 deficiency in
Trends in Endocrinology & Metabolism, August 2021, Vol. 32, No. 8 587
Trends in Endocrinology & Metabolism
India [88], suggesting that excess folate or imbalance of 1C nutrients may negatively affect fetal
growth. In a more B12-replete population, maternal B12 status was not associated with birth
weight [89]. Interestingly, the highest quartile of maternal B12 status was associated with lower
weight gain between birth and 3 years of age [90].
Studies regarding other 1C nutrients and early growth in humans are limited. A recent study
demonstrated that a ‘varied and balanced’ 1C nutrient intake pattern at periconception was
associated with higher birth length and weight [91]. Two studies associated maternal betaine
status with lower birth weight [92,93]. Maternal choline status was positively related to weight
and fat mass at birth but not in early childhood [94]. Overall, while deficiencies in 1C nutrients
during pregnancy seem to restrict fetal growth, whether supplementing these nutrients in case
of an obesogenic environment may protect against offspring obesity is a new area of exploration.
Cardiometabolic outcomes
Cardiometabolic diseases, such as atherosclerosis and type 2 diabetes, are present with
altered OCM and aberrant epigenetic modifications in multiple tissues or organs (e.g., artery,
liver, and pancreas) during pathogenesis [95,96]. High-fat feeding in dams was demonstrated
to disrupt 1C metabolites and enzymes and resulted in genome-wide DNA hypermethylation in
offspring mice [97]. Gestational diabetes mellitus (GDM) in human pregnancies was associated
with higher folate but lower betaine status in the cord blood [98] and altered DNA methylation
of crucial metabolic genes, such as LEP, in newborns [99]. Therefore, under conditions of
OCM derangement secondary to maternal cardiometabolic disturbances, maternal 1C nutrient
intake may be critical to overcome the epigenetic programming that predisposes offspring to
cardiometabolic diseases later in life.
Human evidence regarding maternal OCM and cardiometabolic outcomes is relatively limited.
Low maternal serum folate levels at early pregnancy were associated with higher BMI, whereas
low maternal B12 was associated with higher heart rates in children at 5–6 years [87]. By contrast,
higher maternal folate intake at 32 weeks of gestation was associated with greater lean body
mass in offspring at 9 years [107]. Wang et al. demonstrated 40% lower odds of elevated systolic
blood pressure in children whose mothers had folate levels above (versus below) the median
during pregnancy [108]. However, a cohort in India with higher prevalence of B12 deficiency
suggested that high maternal erythrocyte folate along with low B12 predicted the highest levels
of insulin resistance in children [109]. Consistently, higher maternal folate concentrations were
associated with higher insulin resistance in children in another birth cohort in India [110]. An
588 Trends in Endocrinology & Metabolism, August 2021, Vol. 32, No. 8
Trends in Endocrinology & Metabolism
RCT (n = 3524) in Nepal suggested that FA supplementation was protective for metabolic Outstanding questions
syndrome [111], whereas in a subsample of 1132 participants, B12 deficiency in mothers was What are the time- and dose-specific
associated with a 27% increase in insulin resistance [112]. As for other 1C nutrients, a effects of prenatal 1C nutrient expo-
sures on fetal epigenetic changes in
controlled-feeding RCT demonstrated that higher choline intake in the third trimester of
humans? Do these changes have last-
pregnancy led to lower cord blood cortisol levels [29]. Since chronic cortisol elevation impairs ing effects on health outcomes?
blood glucose and blood pressure, increasing maternal choline intake may provide a protective
mechanism against fetal programming of cardiometabolic diseases. Is there a bell-shaped curve regarding
the relationship between maternal 1C
nutrient intake and benefits on early
Potential risk of 1C nutrient excess development?
While ensuring sufficient maternal supply of 1C nutrients is critical for early development, emerging
Can maternal OCM be modified to
research suggests the potential risk of excess 1C nutrients, especially excess FA consumption.
avert the negative influence of other
There is no upper tolerable intake level (UL) for natural folate, but a UL of 1000 μg was established maternal exposures (e.g., obesity) on
for FA, the synthetic form of folate used in fortified foods and supplements, with concerns that high offspring health?
FA intakes may mask B12 deficiency, increase unmetabolized FA in the body, and inhibit key
What is the right balance of 1C nutrients
1C enzymes, such as dihydrofolate reductase (DHFR) and MTHFR [113]. Several studies in for a pregnant woman? Should 1C
North American populations demonstrate that a considerable number (e.g., 26% in one nutrient intake be personalized with the
study) of pregnant women exceed the UL from supplements and fortified products consideration of genetic polymorphisms
[114,115]. The high folate intake leads to supranutritional folate status [e.g., a serum level to optimize OCM for early development?
over 45.3 nmol/l suggested by the World Health Organization (WHO) [116]], which suggests How can prenatal vitamin supplements
metabolic capacity has been exceeded. Several studies supplementing FA in rodent diets at be better designed to complement
4–20 mg/kg body weight versus control (2 mg/kg) suggest that high maternal FA intake dietary intake of 1C nutrients in
different populations?
increased anxiety behavior and impaired learning and short-term memory of offspring with
altered DNA methylation, neurotrophic factor expression, and DHA concentration in the How does paternal OCM during the
brain [117]. The Infancia y Medio Ambiente (INMA) Project, which enrolled over 2000 Spanish periconceptional period affect early
children, suggests that those with maternal FA intake exceeding UL during pregnancy were development?
associated with lower psychomotor and neurocognitive scores [3,4]. Maternal plasma folate Does 1C nutrient exposure affect early
exceeding the 45.3 nmol/L cutoff was associated with greater risk of autism in the Boston development in a sexually dimorphic
Birth Cohort [69]. manner? How do hormonal treatments,
such as in cases of in vitro fertilization
and transgender pregnancies, influence
A recent study by De Crescenzo et al. identified an interesting phenomenon that high maternal FA OCM during early development in both
intake mirrored the detrimental effect of folate deficiency on cortical neurogenesis and behavioral sexes?
development of offspring, and that both FA excess and deficiency suppressed folate’s participa-
tion in the methionine cycle [2]. These results are consistent with a study by Bahous et al. that high
dietary folate in pregnant mice led to pseudo-MTHFR deficiency, thereby decreasing the use of
folate as a methyl donor [5].
The potential harmful effect of FA excess is also noted for fetal growth and cardiometabolic
functions. Excessive gestational FA intake impaired insulin secretion in mouse offspring [6].
FA intake beyond the first trimester of pregnancy was associated with increased risk of large
for gestational age in a birth cohort in China [7]. High FA and low B12 intake during pregnancy
was associated with insulin resistance of children in the PUNE cohort in India [109]. Excess in
overall 1C nutrient intake is also related to changes in IGF pathway regulation and leptin
secretion [19,118], suggesting that a bell-shaped curve of benefit versus risk may exist for
1C nutrients in general (Figure 4).
Trends in Endocrinology & Metabolism, August 2021, Vol. 32, No. 8 589
Trends in Endocrinology & Metabolism
and interventional studies in humans provide evidence that resonates with findings in animals.
Underlying mechanisms of action include direct impacts of OCM on fetal biosynthesis and macro-
nutrient metabolism and epigenetic programming of the fetal genome as well as modification of the
placental epigenome and metabolism, which subsequently affects fetal nutrient acquisition and
metabolism. However, there are also concerns related to excess maternal 1C nutrient supply
and imbalance between 1C nutrients that could also result in OCM derangement, leading to ad-
verse growth and developmental outcomes.
The challenges of research in this area include the following: (i) the influence of OCM may be time
specific, demonstrated by the differential DNA methylation changes and growth and cognitive
outcomes, with 1C nutrient exposures at different time points of gestation; (ii) the complexity of
1C metabolism regulation by dietary intakes, interactions between 1C pathways and nutrients,
and genetic polymorphisms, which may partly explain the inconsistent results in epigenetic and
functional outcomes in studies; (iii) the difficulty in conducting human studies that pinpoint the
causative relationship among 1C nutrient exposure, epigenomic and cellular changes, and
long-term functional outcomes (see Outstanding questions). Further research is needed to
delineate the dose–response relationship of 1C nutrient intake, in varied forms and combinations,
with early development.
Acknowledgments
The authors give special thanks to Dr Marie Caudill (Cornell University) for her insights into conceptualizing and editing this
manuscript. This research is funded by the National Institute of General Medical Sciences (NIGMS) of the National Institutes
of Health (NIH) (grant number 5SC3GM132010).
Declaration of interests
The authors declare no conflict of interest.
590 Trends in Endocrinology & Metabolism, August 2021, Vol. 32, No. 8