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2018 Drakopoulou Et Al Retrieval of Nearshore Bathymetry
2018 Drakopoulou Et Al Retrieval of Nearshore Bathymetry
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ABSTRACT
Shallow water bathymetry is recognized as one of the most fundamental topics in environmental studies, seabed
morphology research and management of the coastal zone. The detailed mapping as well as the long-term monitoring of
the changes in shallow marine relief is important for the successful completion of coastal construction and environmental
projects. In recent years, optical satellite imagery is proving to be a useful tool to determine coastal bathymetry, as it
provides a time- and cost- effective solution to water depths estimation. In this paper, the two most popular and
successful approaches for bathymetry retrieval, the Lyzenga (1985) linear bathymetry model and the Stumpf et al. (2003)
ratio method, have been applied to Worldview-2 satellite imagery, in order to derive the more accurate bathymetric
model for the shallow-water region of the Chania Gulf, located in NW Crete Island, Greece. This area is sea-grass free
and is dominated by sandy substrate with a few rocky outcrops. The models are implemented over the total study area -
no separation in subareas according to the bottom type. The results are compared with echo sounding ground truth depth
data. The outcomes of the statistical analysis indicate that the linear model provides increased accuracy than the ratio one
over the sandy bottom. On the contrary, in those parts covered by rocky bottoms, none of the two models provided
satisfactory results.
Keywords: Satellite-derived bathymetry, linear Regression, Band Ratios, Radiometric Correction
1. INTRODUCTION
The shallow-water, coastal zone is of paramount importance for the blue-growth and plays a key-role in marine spatial
planning and integrated coastal zone management. The coastal environments belong to the most dynamically changing
and vulnerable zones and host a vast amount of human activities. High-resolution bathymetry and seabed quality are a
prerequisite for any activity and sustainable development along the shallow coastal zone, such as recreational activities,
environmental monitoring, protections against marine hazards, underwater cultural heritage, navigation, fishing,
dredging, offshore platforms and underwater cables and pipelines, exploitation of mineral resources. However, very few,
small and scattered parts have been systematically mapped, with the use of the modern, direct techniques, such as the
high-resolution multi-beam echo-sounders. The latter require extensive and expensive field surveys on board purpose-
built research vessels with the use of high-cost equipment operated by expert personnel.
Recent satellite technologies and image processing algorithms have presented the opportunity to develop quantitative
techniques that have the potential to improve upon traditional photointerpretation techniques, in terms of cost, mapping
fidelity, and objectivity. Thus the use of optical satellite imagery has been explored as an alternative method to produce
reliable bathymetry in shallow water [1], [2], [3]. Optical multi-spectral satellite-derived bathymetry that implements
analytical or empirical methods, is based on the statistical relationships between image pixel values and field measured
water depth measurements. A variety of empirical models have been proposed and evaluated for bathymetric estimations,
from linear functions [4], band ratios to log transformed regression models [2], and non-linear inverse models [3].
*vivi@hcmr.gr; phone +30 22910 76377; fax +30 22910 76347; hcmr.gr
Sixth International Conf. on Remote Sensing and Geoinformation of the Environment (RSCy2018),
K. Themistocleous, G. Papadavid, S. Michaelides, V. Ambrosia, D. G. Hadjimitsis, Eds., Proc. of SPIE Vol. 10773,
107730W · © 2018 SPIE · CCC code: 0277-786X/18/$18 · doi: 10.1117/12.2326189
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Figure 1. Study area - The Gulf of Chania NW Crete, Greece and the footprint of the worldview-2 satellite imageries used to
derive the shallow water depths.
2.2 Data preprocessing
A number of preprocessing steps were performed in the preparation of the multispectral and bathymetric data before
deriving water depths. Concerning the imageries, a varying degree of image corrections were applied in terms of the
WV-WI =
( Coastal − NIR 2 ) (1)
( Coastal + NIR 2 )
The land/water threshold value of 0.77766994 was obtained to separate the land from water through the process of
identifying region of interest - ROI.
Sun glint at the sea surface is a common problem in high resolution imagery over water and the removal of the effects is
a critical step of remote sensing imagery analysis for depth derivation. A variety of glint removal methods from high
resolution images has been developed [1], [13], [14], [16]. The deglinting methodology applied, which has been
proposed by Hedley et al 2005 [13], is based on the exploitation of the linear relationships between the NIR and the
visible bands by using samples of image pixels displaying a range of sun glint. Therefore, image samples were carefully
selected and for each visible band all the selected pixels were included in a linear regression of NIR brightness (x-axis)
against the visible band brightness (y-axis). All the image pixels were deglinted according to the following equation:
where R´i is the deglinted pixel in band i, Ri is the reflectance from visible band i, bi is the regression slope, RNIR is the
NIR band value and the minNIR the minimum NIR value of the sample. The combinations of the NIR band (two bands)
and the visible ones (six bands) that demonstrate strong relationship (Table1), are involved in the linear regression
models, were B2, B3 and B5 with NIR1, and B1, B4 and B6 with the NIR2 [12].
Table 1. The linear regressions' results - values of bi and R2 - between the combinations of visible and NIR bands.
NIR1 NIR2
Band 2 Band 3 Band 5 Band 1 Band 4 Band 6
Slope bi 0.2491 0.1452 0.5570 0.5569 0.2182 0.6816
R2 0.8602 0.9181 0.8002 0.8505 0.8889 0.9288
The atmospheric correction through the subtraction of the dark pixel value followed the sun glint correction. In the
method of dark pixel subtraction the value of an object with an expected zero reflectance such as pixels of deep water, is
subtracted from all pixels to remove the effect of atmospheric scattering. Deep water absorbs the radiation and therefore
the values of the corresponding pixels must be zero. However, the radiation values in these pixels are increased by an
amount which is different for each band [17]. These amounts are usually estimated either as the mean of the pixel values
corresponding to deep waters [1], or as the value of the histogram's cutoff point at the lower end [18]. The last, referred
to as the histogram method, was applied. The histogram of every band was examined and a cut-off at its lower end was
spotted. The value corresponding to this cut-off was considered as the dark pixel value. All the image pixels were
corrected according to the following equation:
where Rac,i is the atmospherically corrected pixel value in band i, Ri is the pixel value in band i and Rdp,i the dark pixel
value (histogram cut-off lower end) for the band i. Finally before the implementation of the bathymetric models the
natural logarithm of the corrected pixel values was calculated. The natural logarithm transformation produces a linear
relationship between water depth and deepwater-corrected radiances of spectral bands.
where D is the estimated depth, n is the number of spectral bands, Li is the radiance after sun glint and atmospheric
correction and α0, αi are constants defining a linear relationship between Li and depth.
The above equation actually represents a multiple linear regression between depths and the radiance of the visible bands
which means that in order to define the constants, the coefficients of regression and model solving, known depths from
field measurements are required. The linear model was implemented over the total study area which is considered to
perform satisfactory results in areas with clear waters and relatively homogeneous seabed. The bands used were 1, 2, 3, 4
and 5. Band 6, NIR1 and NIR2 were excluded as their spectral information is generally considered insignificant for
bathymetry applications [20]. The spectral radiance values from satellite images for the positions with known depths
were extracted and a stepwise multiple regression was performed. After sequential statistical tests and the removal of
leverages the final valid models of 187 and 199 for the each one of the two scenes (the western and the eastern
respectively) were defined (eq. 5 and 6). The statistical parameters that imply the validation and the optimization of the
models and the derived bathymetry are given in Table 2 and Figure 2 respectively.
Table 2. The statistical parameters that imply the validation and the optimization of the models of the equation 5 and 6.
Model R R2 Adjusted R2 Std. Error of the Estimate DW
5 0.980 0.960 0.959 1.262912 1.816
6 0.988 0.976 0.976 0.805007 2.308
0 1 2 3
1_1iiiiiiiiiiiiiiiiiiiiirr
4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 2 1 2 3 4 5
_!111111111111111111111111
6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 2425
Figure 2. Derived depths by the application of the equations 5 and 6 for the image A- left and image B-right respectively.
3.2 Stumph model (Linear Ratio Model)
This model developed by Stumpf et al [2] apply the fundamental principle that every band has a different level of water
body’s absorption. The different level of absorption conceptually will generate the ratio between bands and this ratio will
consistently change simultaneously when the depth changes. The ratio model is expressed by the following equation:
ln ( nR 'i )
D = m1 − m0 (7)
ln ( nR ' j )
where D is the estimated depth, m1 is a tunable constant defining the slope of the relationship between the ratio and
depth, R'i and R'j are the bands i and j radiance of light reflected off the water surface, i, j are bands 1-4 (i≠j), m0 is the
offset for zero depth, n is a constant chosen to assure both that the logarithm will be positive under any condition and
that the ratio will produce a linear response with depth.
The above equation actually represents a linear regression between depths as dependent variable and the ratio (relative
depths) as independent variable. The ratio was applied for the pairs of CB-B, CB-G, CB-Y, B-G & B-Y bands and for n
= 1000. In order to define the constants, that means the coefficients of regression and model solving, known depths from
field measurements are also required. Thus, the two sets of 250 control points with known depth for each one of the
scenes, were used in order to define the value of the constants. The results of the linear regressions applied for each ratio
for both scenes are shown in Table 3.
Table 3. The linear regressions' results - values of bi and R2 - between the combinations of visible and NIR bands.
ln (1000 R '2 )
and D = −202.746 + 198.3726 (9)
ln (1000 R '3 )
Depth (m)
Depth (m)
a ........................ 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 2425
0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 2425
Figure 3. Derived depths by the application of the equations 8 and 9 for the image A- left and image B-right respectively.
4. RESULTS
Both models' results were tested and evaluated by using a number of points of known depth. For each one of the two
imageries a set of 250 control points with known depth from the "pool" of the soundings were randomly selected. The
soundings which were used for the calibration of the models have been excluded from the "pool" when the random
sampling for the control ones were performed.
Lyzenga model of Image A. The left diagrams of Figure 4 concern depth derived from applying the Lyzenga method
(Eq. 4,5) to the satellite image A vs. depths from soundings. The diagram in the first row shows a strong relationship
between derived and observed depths (R2 = 0.952) for the control points. The depth estimation for these known depth
positions was considered satisfactory that lied inside the zone of confidence interval of the estimated individual values. A
number of 13 points, that is 5% , lies outside the zone, while the rest 236 which consist the 95% of the total lie inside it.
Even thought the absolute differences between known and estimated depths at these positions vary from 0.001m to 6m
with a mean value equal to 1.06m and a standard deviation of 0.9m, only for very few of them (13 points) which are in
the deeper part of the study area (20m - 25m), the differences are high (3-6m). For the 63% of the control points the
differences are lower than 1m, while the 40% of them are below 0.6m. Thus we could argue based on the statistical
analysis that the linear band model indicates a sufficient performance in the estimated zone of 0-20m depth.
Stumph model of Image A. The statistical analysis performed to evaluate the results of the ratio model (eq. 7, 8) gave
almost similar results with the band model (Figure 4 - right diagrams). A strong correlation between the estimated and
measured depths is performed (R2=0.942) with the linear regression line almost similar to 1:1 data fit. A number of 14
points lies outside the zone of confidence interval, of which the half of them are referred to points of known depth over
20m. A percent of 61% of the points, concerns differences lower than 1m while the differences below 0.6m consist the
36%. The MAE is 1.16 with a standard deviation of 1.05m.
Lyzenga model of Image B. The left diagrams of Figure 5 concern depth derived from applying the Lyzenga method (Eq.
4,6) to the satellite image B vs. depths from soundings. The diagram in the first row shows a strong relationship between
derived and observed depths (R2 = 0.914) for the control points. Even though the depth estimation for these known depth
positions was considered satisfactory as lied inside the zone of confidence interval of the estimated individual values
(only of 11 points, that is ~4% , lies outside the zone, while the rest 239 lie inside it), the regression model's line doesn't
fit, such as in image A matches almost similar with the 1:1 data fit. The absolute differences between known and
estimated depths also vary from 0.001m to 6m with a mean value equal to 1.18m and a standard deviation of 0.99m.
Similarly to the results of the Lyzenga model in image A only for very few points which are in the deeper part of the
30-
J?
20-
10- Observed
- Linear
Data fit 1:1
Observed
- Linear
y = 0.9523 x +0.7614 Data fit 1:1
R square = 0.952
Y R syuarex:0%941228
0 10 15 20 25 0 5 10 15 20 25
40- 50-
Mean =1.06
Std. Dev. =0.944 Mean =1.16
Std. Dev. =1.048
N =247 N =247
40-
30
c 30-
N 41
7
Q 20 tT
LL LL
20
10
2 3 4 5 6
rfT1
3
,rH1m.rh.
4 5 6
f 1 96 SD
1 96 SD
Figure 4. The statistical evaluation of the Lyzenga and Stumpf models' results for the first image (image A). The left
diagrams concern the Lyzenga model results and the right diagrams the Stumpf model results. First row: The relationship
between the estimated and the measured depth values for 250 control points. Second row: the histogram of the frequencies
of the absolute differences between the estimated and the measured depths. Third row: the Bland-Altman plot showing the
differences between measured and estimated depths vs. measured depths and the 95% confidence interval limits.
0 s 20
5 10 15 20
Measured Depth (m)
Measured Depth (m)
30-
]+
U
N
v 20-
N
_.__ _._=
Fl
4.00
n , p
6.00
Absolute Differences
Absolute Differences
+1 96 SD
te
1 96 SD
Estimated Depth (te)
1 96 SD Estimated Depth (mf
95% Confidence interval mean
95% Confidence interval
0 00 'DOD is Do
Figure 5. The statistical evaluation of the Lyzenga and Stumpf models' results for the first image (image B). The left
diagrams concern the Lyzenga model results and the right diagrams the Stumpf model results. First row: The relationship
between the estimated and the measured depth values for 250 control points. Second row: the histogram of the frequencies
of the absolute differences between the estimated and the measured depths. Third row: the Bland-Altman plot showing the
differences between measured and estimated depths vs. measured depths and the 95% confidence interval limits.
Stumph model of Image B The statistical analysis performed to evaluate the results of the ratio model (eq. 7, 9) is shown
in Figure 5 - right diagrams. The estimated and measured depths are linear correlated but with a lower R2 values that in
all the previous cases (R2=0.856). As it is shown by the histogram of the absolute differences frequencies. As it is shown
by the histogram of the absolute differences' frequencies, a percentage of 62% corresponds to differences higher than
1m, which indicates that the ratio model doesn't retrieve sufficiently the estimated zone of 0-20m depth in this scene.
eeenfml
Figure 6. The bathymetric map derived by satellite image processing using Lyzenga linear band model.
Figure 7. The absolute differences between the satellite derived bathymetry and the DEM from soundings.
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