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231 Enzyme Inhibition12,13,14
231 Enzyme Inhibition12,13,14
Enzyme Inhibition
Bioc. 231
1
Enzyme Inhibition
• One of the ways of altering enzyme activity is through
compounds binding in the active site. If these compounds
are not part of the normal reaction, they inhibit the
enzyme.
§ Inhibitors are compounds that decrease the rate of an
enzyme-catalyzed reaction by binding to the enzyme.
• The study of enzyme inhibition has enhanced our
knowledge of specificity and the nature of functional
groups at the active site.
• The activity of certain enzymes is regulated by a feedback
mechanism such that an end product inhibits the enzyme’s
function in an initial stage of a sequence of reactions
2
Enzyme Inhibition
§ The action of an inhibitor on an enzyme can be described as either
irreversible or reversible.
§ In irreversible inhibitions, inhibition progressively increases with time.
• Complete inhibition results if the concentration of the irreversible
inhibitor exceeds that of the enzyme.
• Irreversible inhibitors bind to enzymes through covalent bonds.
§ In reversible inhibition, an equilibrium exists between the enzyme and
the inhibitor.
• Reversible inhibitors typically bind to enzymes through non covalent
bonds, thus dilution of the enzyme–inhibitor complex results in
dissociation of the reversibly bound inhibitor, and recovery of enzyme
activity.
• Reversible inhibitors are generally classified as competitive, non-
competitive, or uncompetitive with respect to their relationship to a
substrate of the enzyme.
3
Reversible Inhibition:
1. Competitive Inhibition
• A competitive inhibitor
competes with a substrate for
binding at the same active site
and therefore is usually a close
structural analog of the
substrate.
• Note that the complex EI does
not react with S to form
products.
4
Reversible Inhibition:
1. Competitive Inhibition
5
Reversible Inhibition:
1. Competitive Inhibition
• The Lineweaver–Burk
equation is given by
6
Reversible Inhibition:
1. Competitive Inhibition
• A well-known example of a competitive inhibitor is malonic acid,
CH2(COOH)2, which competes with succinic acid in the dehydrogenation
reaction catalyzed by succinic dehydrogenase.
• Because malonic acid resembles succinic acid in structure, it can combine
with the enzyme, although no product is formed in this reaction.
7
Reversible Inhibition:
1. Competitive Inhibition
• To overcome competitive inhibition, we need
to increase the substrate concentration;
when the substrate concentration is increased
to sufficiently high level, the substrate-binding
sites are occupied by substrate and inhibitor
molecules cannot bind.
8
Reversible Inhibition:
1. Competitive Inhibition
• Competitive inhibitors increase the apparent KM of the
enzyme because they raise the concentration of substrate
necessary to saturate the enzyme. They have no effect on
Vmax.
A. Effect of a competitive inhibitor on the reaction velocity (v0) versus substrate ([S]) plot.
B. Lineweaver-Burk plot of competitive inhibition of an enzyme. 9
Reversible Inhibition:
1. Competitive Inhibition
• The inhibited and uninhibited reactions show different x-axis
intercepts, indicating that the apparent KM is increased in the
presence of the competitive inhibitor because -1/ KM moves
closer to zero from a negative value.
10
11
Reversible Inhibition:
2. Non Competitive Inhibition
• A noncompetitive inhibitor
binds an enzyme at a site
other than the active site;
therefore, it can bind to both
the free enzyme and the
enzyme–substrate complex .
• The binding of the inhibitor
has no effect on the substrate
binding, and vice versa.
12
Reversible Inhibition:
2. Non Competitive Inhibition
• Non competitive inhibition
also may be irreversible if the
inhibitor destroys part of the
enzyme involved in catalytic
activity.
• Neither EI nor ESI forms
products.
• Because I does not interfere
with the formation of ES,
noncompetitive inhibition
cannot be reversed by
increasing the substrate
concentration.
13
Reversible Inhibition:
2. Non Competitive Inhibition
• The initial rate is given by:
14
Reversible Inhibition:
2. Non Competitive Inhibition
• The Lineweaver–Burk
equation becomes
15
Reversible Inhibition:
2. Non Competitive Inhibition
• The binding of the heavy metal (e.g. Hg, Ag, Pb)
shows noncompetitive inhibition.
A. Effect of a noncompetitive inhibitor on the reaction velocity (vo) versus substrate ([S]) plot.
B. Lineweaver-Burk plot of noncompetitive inhibition of an enzyme. 17
Reversible Inhibition:
3. Uncompetitive Inhibition
• An uncompetitive inhibitor
does not bind to the free
enzyme; instead, it binds
reversibly to the enzyme–
substrate complex to yield an
inactive ESI complex.
• Increasing substrate
concentration results in more
ES complexes to which the
inhibitor binds and, thereby,
increases the inhibitions.
18
Reversible Inhibition:
3. Uncompetitive Inhibition
• The ESI complex does not
yield a product.
• Because I does not interfere
with the formation of ES,
uncompetitive inhibition
cannot be reversed by
increasing the substrate
concentration.
19
Reversible Inhibition:
3. Uncompetitive Inhibition
• The initial rate is given by:
20
Reversible Inhibition:
3. Uncompetitive Inhibition
• The Lineweaver–Burk
equation is given by:
22