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Epidemiological Cutoff Values For Antifungal Susceptibility Testing
Epidemiological Cutoff Values For Antifungal Susceptibility Testing
M57S
Epidemiological Cutoff Values for Antifungal
Susceptibility Testing
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Abstract
Clinical and Laboratory Standards Institute document M57S—Epidemiological Cutoff Values for Antifungal
Susceptibility Testing includes epidemiological cutoff values (ECVs) and quality control tables developed
following the guidance in CLSI document M57.1 These ECVs are valid only when they are developed in
accordance with CLSI document M571 and when minimal inhibitory concentrations or minimal effective
concentrations are generated according to the reference broth dilution methods described in CLSI documents
M272 and M38.3 Users should replace previously published tables with these new tables. Changes in the tables
since the previous edition was published appear in boldface type.
Clinical and Laboratory Standards Institute (CLSI). Epidemiological Cutoff Values for Antifungal Susceptibility
Testing. 4th ed. CLSI supplement M57S (ISBN 978-1-68440-158-1 [Print]; ISBN 978-1-68440-159-8 [Electronic]).
Clinical and Laboratory Standards Institute, USA, 2022.
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Suggested Citation
CLSI. Epidemiological Cutoff Values for Antifungal Susceptibility Testing. 4th ed. CLSI
supplement M57S. Clinical and Laboratory Standards Institute; 2022.
Previous Editions:
M59: April 2016, January 2018, June 2020
M57-Ed1-S-Ed4
ISBN 978-1-68440-158-1 (Print)
ISBN 978-1-68440-159-8 (Electronic)
ISSN 1558-6502 (Print)
ISSN 2162-2914 (Electronic) Volume 42, Number 18
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Committee Membership
Subcommittee on Antifungal Susceptibility Tests
Gary W. Procop, MD, MS Sharon K. Cullen, BS, RAC Audrey N. Schuetz, MD, MPH,
Chairholder Beckman Coulter, Inc. D(ABMM)
American Board of Pathology Microbiology Business Mayo Clinic
USA USA USA
Philippe J. Dufresne, PhD, RMCCM Jeff Fuller, PhD, FCCM, D(ABMM) Paul E. Verweij, MD, FECMM
Vice-Chairholder London Health Sciences Centre Radboud University Medical Center
Institut national de santé publique Canada the Netherlands
du Québec
Canada Kimberly E. Hanson, MD, MHS Nathan P. Wiederhold, PharmD
University of Utah and University of Texas Health Science
Camille Hamula, PhD, D(ABMM) ARUP Laboratories Center at San Antonio
Committee Secretary USA USA
Saskatoon Health Region/
University of Saskatchewan Nicole M. Holliday, BA Adrian M. Zelazny, PhD, D(ABMM)
Canada Thermo Fisher Scientific National Institutes of Health
USA Department of Laboratory Medicine
Elizabeth Berkow, PhD USA
Centers for Disease Control and
Prevention
USA
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Shawn R. Lockhart, PhD, D(ABMM), Elizabeth Berkow, PhD Kimberly E. Hanson, MD, MHS
F(AAM) Centers for Disease Control and University of Utah and
Chairholder Prevention ARUP Laboratories
Centers for Disease Control and USA USA
Prevention
USA Jeff Fuller, PhD, FCCM, D(ABMM) John D. Turnidge, MD, BS, FRACP,
London Health Sciences Centre FASM, FRCPA
Philippe J. Dufresne, PhD, RMCCM Canada The University of Adelaide
Vice-Chairholder Australia
Institut national de santé publique Mahmoud A. Ghannoum, PhD,
du Québec FIDSA, MBA Thomas J. Walsh, MD, PhD(hon),
Canada Case Western Reserve University FIDSA, FAAM, FECMM
USA Weill Cornell Medicine of Cornell
Nathan P. Wiederhold, PharmD University and New York
Committee Secretary Kerian K. Grande Roche, PhD Presbyterian Hospital
University of Texas Health Science FDA Center for Drug Evaluation and USA
Center at San Antonio Research
USA USA
Audrey N. Schuetz, MD, MPH, Stephanie L. Mitchell, PhD, Matthew A. Wikler, MD, FIDSA, MBA
D(ABMM) D(ABMM) IDTD Consulting
Co-Chairholder Cepheid USA
Mayo Clinic USA
USA Yanan (Nancy) Zhao, PhD
Natasha N. Pettit, PharmD, Center for Discovery and
Vera Tesic, MD, MS, D(ABMM) BCPS(AQ-ID) Innovation, Hackensack Meridian
Co-Chairholder University of Chicago Medicine Health
University of Chicago USA USA
USA
Thomas J. Walsh, MD, PhD(hon),
Tanis Dingle, PhD, D(ABMM), FCCM FIDSA, FAAM, FECMM
Alberta Precision Laboratories– Weill Cornell Medicine of Cornell
Public Health Laboratory University and New York
Canada Presbyterian Hospital
USA
Kimberly E. Hanson, MD, MHS
University of Utah and Nathan P. Wiederhold, PharmD
ARUP Laboratories University of Texas Health Science
USA Center at San Antonio
USA
Staff
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Contents
Abstract .................................................................................................... i
Glossary. Antifungal Agent Abbreviations, Routes of Administration, and Drug Class ...... 16
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Foreword
With the development of standard methodologies for testing the susceptibility of fungal
species to several antifungal agents, minimal inhibitory concentration (MIC) and minimal
effective concentration (MEC) distributions are available to determine epidemiological cutoff
values (ECVs) for ascomycete yeasts (Candida spp. and Saccharomyces spp.), basidiomycete
yeasts (Cryptococcus spp., Rhodotorula spp., Trichosporon spp.), and Aspergillus spp. of
clinical importance. The ECVs provided in this document were established using the guidance
in CLSI document M57.1 The ECV, which is the MIC or MEC that separates fungal populations
into those with and without acquired and/or mutational resistance based on their
phenotypes (wild-type [WT] or non-wild-type [NWT]), is useful for distinguishing between
WT isolates without acquired resistance mechanisms and NWT isolates harboring acquired
resistance mechanisms. Unlike breakpoints, ECVs do not classify isolates as treatable
(susceptible) or untreatable (resistant). In lieu of breakpoints, clinicians can use ECVs alone
when deciding whether to treat a patient with a certain agent (see CLSI document M571).
However, ECVs do not predict therapeutic response. For ECVs to be clinically useful, the MIC
or MEC should be determined using the broth microdilution procedure for yeasts (see CLSI
document M272) or the broth microdilution procedure for filamentous fungi (see CLSI
document M383).
NOTE: Current fungal taxonomy is under revision. Many genera have both a teleomorph
(sexual state) and an anamorph (asexual state) name. In this document, the traditional
Candida anamorph names are used to provide continuity with both past procedures and
associated documents such as CLSI document M272 and others.4-6
NOTE: When serial twofold dilution MICs are being prepared and tested, the actual
dilution scheme is, eg, 128, 64, 32, 16, 8, 4, 2, 1, 0.5, 0.25, 0.125, 0.0625,
0.03125 µg/mL, etc. For convenience only, and not because these are the actual
concentrations tested, it was decided to use the following values in M57S: 128, 64, 32,
16, 8, 4, 2, 1, 0.5, 0.25, 0.12, 0.06, 0.03 µg/mL, etc. The values that appear in the tables
are equivalent to the actual values tested, eg, 0.12 µg/mL = 0.125 µg/mL, and laboratories
should report an ECV of ≤ 0.125 μg/mL as ≤ 0.12 μg/mL.
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Overview of Changes
This document replaces the previous edition of the approved document, M59-Ed3, published
in 2020. Several changes were made in this edition, including:
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Request for antifungal susceptibility testing data from fungal pathogens needed for the
development of ECVs to be included in future editions of M57S:
The Working Group on Antifungal Epidemiological Cutoff Values requests submission of raw
antifungal susceptibility testing data for yeasts and filamentous fungi generated using the
protocols provided in CLSI documents M272 and M38.3 This request is only for reference
broth microdilution and should not include data generated using commercially available
panels. Because the data will be combined with data from other laboratories, even a small
amount of data is useful, especially for less frequently identified species. All species should
be identified using a molecular assay or matrix-assisted laser desorption/ionization
time-of-flight mass spectrometry.
NOTE: The content of this document is supported by the CLSI consensus process and does not
necessarily reflect the views of any single individual or organization.
Key Words
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References
1 CLSI. Principles and Procedures for the Development of Epidemiological Cutoff Values for Antifungal
Susceptibility Testing. 1st ed. CLSI guideline M57. Clinical and Laboratory Standards Institute; 2016.
2 CLSI. Reference Method for Broth Dilution Antifungal Susceptibility Testing of Yeasts. 4th ed. CLSI
standard M27. Clinical and Laboratory Standards Institute; 2017.
3 CLSI. Reference Method for Broth Dilution Antifungal Susceptibility Testing of Filamentous Fungi. 3rd ed.
CLSI standard M38. Clinical and Laboratory Standards Institute; 2017.
4 Borman AM, Johnson EM. Name changes for fungi of medical importance, 2018 to 2019. J Clin Microbiol.
2021;59(2). doi:10.1128/jcm.01811-20
5 Warnock DW. Name changes for fungi of medical importance, 2012 to 2015. J Clin Microbiol.
2017;55(1):53-59. doi:10.1128/jcm.00829-16
6 Warnock DW. Name changes for fungi of medical importance, 2016-2017. J Clin Microbiol. 2019;57(2).
doi:10.1128/jcm.01183-18
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Table 1. (Continued)
Antifungal Agent Species ECV, µg/mLb,c,d
Itraconazole C. dubliniensis 0.25
C. duobushaemulonii 1
C. glabratae 4
C. guilliermondiie 2
C. kefyre 0.5
C. kruseie 1
C. lusitaniaee 1
C. metapsilosis 1
C. orthopsilosis 0.5
C. parapsilosis 0.5
C. pelliculosae 1
C. tropicalis 0.5
S. cerevisiae 2
Micafungin C. auris 0.5
C. dubliniensis 0.12
C. duobushaemulonii 0.5
C. kefyre 0.12
C. lusitaniaee 0.5
C. metapsilosis 1
C. orthopsilosis 1
C. pelliculosae 0.12
S. cerevisiae 0.5
Posaconazole C. albicans 0.06
C. dubliniensis 0.12
C. duobushaemulonii 1
C. glabratae 1
C. guilliermondiie 0.5
C. haemulonii 1
C. kefyre 0.5
C. kruseie 0.5
C. lusitaniaee 0.06
C. metapsilosis 0.25
C. orthopsilosis 0.25
C. parapsilosis 0.25
C. pelliculosae 2
C. tropicalis 0.12
S. cerevisiae 2
Voriconazole C. duobushaemulonii 0.5
C. glabratae 0.25
C. haemulonii 2
C. metapsilosis 0.06
C. orthopsilosis 0.12
C. pelliculosae 0.25
S. cerevisiae 0.5
Abbreviation: ECV, epidemiological cutoff value.
Table 1. (Continued)
Footnotes
a. All Candida spp. listed are sensu stricto except when stated otherwise.
b. The ECVs in this document were established using broth microdilution as outlined in CLSI document M27.1 If
another methodology is used for susceptibility testing, that method must be validated against broth
microdilution before the ECVs are used, just as other methods must be validated before breakpoints
established using broth microdilution are used.
c. ECVs capture ≥ 97.5% of the statistically modeled population. Because ECVs are defined by phenotypic
rather than genotypic data, in rare instances, ECVs may not identify some potentially resistant isolates
(non-wild-type).
d. If the 24-hour growth control is insufficient, it should be incubated for an additional 24 hours.
e. These Candida spp. are also recognized under the following alternate taxonomic names:
C. glabrata: Nakaseomyces glabrata
C. guilliermondii: Meyerozyma guilliermondii
C. kefyr: Kluyveromyces marxianus
C. krusei: Pichia kudriavzevii
C. lusitaniae: Clavispora lusitaniae
C. pararugosa: Wickerhamiella pararugosa
C. pelliculosa: Wickerhamomyces anomalus
C. rugosa: Diutina rugosa
f. C. lusitaniae is not intrinsically resistant to amphotericin B. However, C. lusitaniae may develop resistance to
amphotericin B in vivo during therapy. When phenotypic resistance was noted in studies, the phenotype was
observed using only agar gradient strips and was not detected by broth microdilution methods.7
g. The fluconazole ECV for C. haemulonii is very high and may be an indication of intrinsic resistance or of
limited susceptibility to this agent. A minimal inhibitory concentration (MIC) value lower than the ECV
does not imply that the isolate is susceptible to fluconazole.
h. The fluconazole ECV for S. cerevisiae is high and may be an indication of intrinsic resistance or of limited
susceptibility to this agent. An MIC value lower than the ECV does not imply that the isolate is susceptible
to fluconazole.
NOTE: Information in boldface type is new or modified since the previous edition.
Table 1. (Continued)
Footnotes
a. The ECVs for Cryptococcus were established for the distinct molecular types. The phylogeny for Cryptococcus
is currently in transition. VGI and VGII are molecular genotypes of C. gattii and C. deuterogattii (formerly
C. gattii), respectively, that can be recognized only by molecular typing of isolates by polymerase chain
reaction or DNA sequencing–based methods, including multilocus sequence typing and amplified-fragment
length polymorphism typing. The molecular types may or may not be unique species, and future editions of
this document may name them differently according to accepted taxonomic changes.4 Globally, VNI is the
most common molecular genotype of C. neoformans.
b. The ECVs in this document were established using broth microdilution as outlined in CLSI document M27.6 If
another method is used for susceptibility testing, it must be validated against broth microdilution before the
ECVs are used, just as other methods must be validated before breakpoints established using broth
microdilution are used.
c. ECVs capture ≥ 97.5% of the statistically modeled population. Because ECVs are defined by phenotypic
rather than genotypic data, in rare instances, ECVs may not identify some potentially resistant isolates
(non-wild-type).
NOTE: Information in boldface type is new or modified since the previous edition.
Table 2. (Continued)
Footnotes
a. ECVs for Aspergillus spp. are determined after 48 hours of incubation for testing triazoles and amphotericin B
and after 24 hours of incubation for testing caspofungin (see CLSI document M381).
b. The ECVs in this document were established using broth microdilution as outlined in CLSI document M38.1 If
another method is used for susceptibility testing, it must be validated against broth microdilution before the
ECVs are used, just as other methods must be validated before breakpoints established using broth
microdilution are used.
c. ECVs capture ≥ 97.5% of the statistically modeled population. Because ECVs are defined by phenotypic
rather than genotypic data, in rare instances, ECVs may not identify some potentially resistant isolates
(non-wild-type).
d. Low minimal inhibitory concentrations for A. terreus do not correlate with positive clinical outcomes, and
testing is not recommended. Use of this antifungal agent is not recommended according to published
treatment guidelines.8,9
e. The caspofungin minimal effective concentration is the lowest concentration of caspofungin that leads to the
growth of small, rounded, compact hyphal forms compared with the hyphal growth seen in the growth control
well (see CLSI document M381).
NOTE: Information in boldface type is new or modified since the previous edition.
Table 3. (Continued)
Footnotes
a. All Candida spp. listed are sensu stricto except when stated otherwise.
b. Unlike breakpoints, ECVs do not predict clinical response to therapy. When breakpoints are available for the
fungal species and antifungal agents being evaluated, the ECV should not be used in clinical practice (see CLSI
documents M271 and M27M44S2).
c. The ECVs in this document were established using broth microdilution as outlined in CLSI document M27.1 If
another method is used for susceptibility testing, it must be validated against broth microdilution before the
ECVs are used, just as other methods must be validated before breakpoints established using broth
microdilution are used.
d. ECVs capture ≥ 97.5% of the statistically modeled population. Because ECVs are defined by phenotypic
rather than genotypic data, in rare instances, ECVs may not identify some potentially resistant isolates
(non-wild-type).
e. If the 24-hour growth control is insufficient, it should be incubated for an additional 24 hours.
Table 4. (Continued)
f. These Candida spp. are also recognized under the following alternate taxonomic names:
C. glabrata: Nakaseomyces glabrata
C. guilliermondii: Meyerozyma guilliermondii
C. kefyr: Kluyveromyces marxianus
C. krusei: Pichia kudriavzevii
C. lusitaniae: Clavispora lusitaniae
C. pararugosa: Wickerhamiella pararugosa
C. pelliculosa: Wickerhamomyces anomalus
C. rugosa: Diutina rugosa
g. ECVs for rezafungin were adopted during a meeting with the Subcommittee on Antifungal Susceptibility
Tests held in June 2021. The ECVs are considered tentative for one year from the publication of this
document and are open for comment.
NOTE: Information in boldface type is new or modified since the previous edition.
Footnotes
a. Unlike breakpoints, ECVs do not predict clinical response to therapy. When breakpoints are available for the
fungal species and antifungal agents being evaluated, the ECV should not be used in clinical practice (see CLSI
documents M572 and M38M51S3).
b. The ECVs in this document were established using broth microdilution as outlined in CLSI document M38.1 If
another method is used for susceptibility testing, it must be validated against broth microdilution before the
ECVs are used, just as other methods must be validated before breakpoints established using broth
microdilution are used.
c. ECVs capture ≥ 97.5% of the statistically modeled population. Because ECVs are defined by phenotypic
rather than genotypic data, in rare instances, ECVs may not identify some potentially resistant isolates
(non-wild-type).
d. ECVs for Aspergillus spp. are determined after 48 hours of incubation for testing voriconazole (see CLSI
document M381).
NOTE: Information in boldface type is new or modified since the previous edition.
M57S-Ed4
Antifungal Agent
Amphotericin B
Isavuconazole
Anidulafungin
Posaconazole
Voriconazole
Itraconazole
Caspofungin
Fluconazole
Rezafungina
Flucytosine
Micafungin
Species
YEASTS
Candida albicans ECV BP/ECV BP BP/ECV – – – BP/ECV ECV BP/ECV BP/ECV
Candida auris – ECV ECV – TR-L – – ECV – BP/ECV –
Candida dubliniensis ECV ECV – ECV TR-L – ECV ECV ECV BP/ECV –
Candida TR-H ECV ECV ECV TR-L ECV ECV ECV ECV – ECV
duobushaemulonii
Candida glabratab ECV BP/ECV BP BP/ECV – – ECV BP/ECV ECV BP/ECV ECV
Candida ECV BP/ECV BP/ECV ECV TR-L – ECV BP/ECV ECV – –
guilliermondiib
Candida haemulonii – ECV – ECV – – – – ECV – ECV
Candida kefyrb ECV ECV – ECV TR-L – ECV ECV ECV – –
Candida kruseib ECV BP/ECV BP IR – – ECV BP/ECV ECV BP/ECV BP/ECV
Candida lusitaniaeb ECV ECV ECV ECV TR-L – ECV ECV ECV – –
© Clinical and Laboratory Standards Institute. All rights reserved.
Candida metapsilosis ECV ECV ECV ECV TR-L – ECV ECV ECV – ECV
Candida orthopsilosis ECV ECV ECV ECV TR-L – ECV ECV ECV – –
Candida parapsilosis ECV BP/ECV BP/ECV BP/ECV TR-L TR-L ECV BP/ECV ECV BP/ECV BP
Candida pararugosab – – – ECV – – – – – – –
Candida pelliculosab ECV – – ECV TR-L – ECV ECV ECV – ECV
Candida rugosab – – – ECV – – – – – – TR-L
Candida tropicalis ECV BP/ECV BP BP/ECV – – ECV BP/ECV ECV BP/ECV BP/ECV
Cryptococcus gattii ECV IR IR ECV ECV – ECV IR – – ECV
(VGI)
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Table 6. (Continued)
© Clinical and Laboratory Standards Institute. All rights reserved.
Antifungal Agent
Amphotericin B
Isavuconazole
Anidulafungin
Posaconazole
Voriconazole
Itraconazole
Caspofungin
Fluconazole
Rezafungina
Flucytosine
Micafungin
Species
Yeasts (Continued)
Cryptococcus ECV IR IR ECV ECV – ECV IR – – ECV
deuterogattii (VGII)
Cryptococcus ECV IR IR ECV ECV – ECV IR ECV – ECV
neoformans (VNI)
Rhodotorula ECV IRc IRc IRd TR-L – ECV IRc ECV – ECV
mucilaginosa
Saccharomyces ECV ECV ECV ECV TR-L – ECV ECV ECV – ECV
cerevisiae
Trichosporon asahii ECV IRc IRc ECV – – ECV IRc ECV – –
Molds
Aspergillus flavus ECV – ECV IR –e ECV ECV – ECV – ECV
Aspergillus fumigatus ECV – ECV IR –e ECV ECV – – – BP/ECV
Aspergillus niger ECV – ECV IR –e ECV ECV – ECV – ECV
Aspergillus terreus ECVf – ECV IR –e ECV ECV – ECV – ECV
Aspergillus versicolor ECV – – IR –e – – – – – –
Abbreviation: ECV, epidemiological cutoff value.
Key: –, ECV not defined; ECV, ECV defined; BP, clinical breakpoint defined; IR, this species is intrinsically resistant to this antifungal agent; TR-H, ECV cannot
be defined for this species–antifungal agent combination because minimal inhibitory concentration (MIC) distribution is truncated on the high end of the
recommended testing range; TR-L, ECV cannot be defined for this species–antifungal agent combination because the MIC distribution is truncated on the low
end of the recommended testing range.
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Table 6. (Continued)
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M57S-Ed4
Footnotes
a. ECVs and MIC breakpoints for rezafungin were adopted during a meeting with the Subcommittee on Antifungal Susceptibility Tests held in
June 2021. The ECVs and MIC breakpoints are considered tentative for one year from the publication of this document and CLSI document
M27M44S1 and are open for comment.
b. These Candida spp. are also recognized under the following alternate taxonomic names:
C. glabrata: Nakaseomyces glabrata
C. guilliermondii: Meyerozyma guilliermondii
C. kefyr: Kluyveromyces marxianus
C. krusei: Pichia kudriavzevii
C. lusitaniae: Clavispora lusitaniae
C. pararugosa: Wickerhamiella pararugosa
C. pelliculosa: Wickerhamomyces anomalus
C. rugosa: Diutina rugosa
c. The intrinsic resistance (IR) of Rhodotorula spp. and Trichosporon spp. for echinocandins was adopted during a meeting with the Subcommittee on
Antifungal Susceptibility Tests held in January 2020. See CLSI document M27M44S1 for a complete IR listing.
d. The IR of Rhodotorula spp. for fluconazole was adopted during a meeting with the Subcommittee on Antifungal Susceptibility Tests held in
June 2021.
e. Do not report.2 IR of Aspergillus spp. to flucytosine cannot be determined because pH differences cause significant variation in MICs in vitro. There
are no robust studies on correlation of MICs to clinical outcome.
© Clinical and Laboratory Standards Institute. All rights reserved.
f. Low MICs for A. terreus do not correlate with positive clinical outcomes, and testing is not recommended. Use of this antifungal agent is not
recommended according to published treatment guidelines.3,4
NOTE: Information in boldface type is new or modified since the previous edition.
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Licensed to: Ignasi Baliarda
© Clinical and Laboratory Standards Institute. All rights reserved.
Table 6. (Continued)
M57S-Ed4
15
M57S-Ed4
Footnotes
a. These abbreviations are assigned to one or more diagnostic products in the United States. If no diagnostic
product is available, the abbreviation is that of the manufacturer.
NOTE: Information in boldface type is new or modified since the previous edition.
The QSEs covered by M57S and its related CLSI documents are available on the CLSI website:
https://clsi.org/qse
NOTES
M57-Ed1-S-Ed4