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Illuminating A Path For Organic Synthesis Towards Sustainability
Illuminating A Path For Organic Synthesis Towards Sustainability
BruceCorresponding
Department
eMail Author& Biochemistry, University of California Santa Barbara, Santa Barbara, CA 93106, USA
lipshutz@chem.ucsb.edu
H. Lipshutz
of Chemistry
Biographical Sketch
Bn O
O + O O NHCbz
NHCbz 9 O
9
O O O Bn N N
conditions
94%; E only
in water Cl2Ru
O Ph
O O PCy3
+ O
2
O O Grubbs II
80%; E only
OSO3 Na
2 Are We up to the Challenge? Too Late Now…
SDS
Figure 2 Structures of representative amphiphiles If only this was a one-time event; a one-off, attributable
to the ‘luck of the draw’ in terms of selection of referees.
abling technology was not only possible in water, but also Unfortunately, having been around the block a few times I
in ocean water, where the chemistry proceeded with even knew that this was no fluke; rather, it was representative of
better results! We described how micellar catalysis with the many setbacks coming our way. After all, traditional or-
‘designer’ surfactants enabled the desired synthetic goals, ganic chemists like the world they have inherited, and skill-
and that such a nanoparticle approach to chemistry in wa- fully maintained. They are comfortable in this setting; hey,
I was, too! We all know the rules, know how to play the
game, and how to maintain the positions that we have
worked very hard to achieve, especially in academic circles.
That’s just human nature. But chemistry today, unlike a
century ago, is rapidly consuming our resources,8 and at the
expense of the world to be inherited by our children and
grandchildren. Those, like mine, will wonder why the plan-
et is so polluted with our chemical waste; why the petro-
leum reserves are so low, and why the metals needed for so
many important purposes are extremely expensive, or
worse yet, gone. Today, I no longer in good conscience have
to look at my beautiful 5-year-old granddaughter, Zoey (Fig-
ure 4), and tell her that I continue to knowingly pollute the
planet she will occupy for many years to come.
Already back in 2007, we had also completed, in addi-
tion to Subir’s study on metathesis (vide supra),11 related
work using Pd catalysis documenting that this non-tradi-
OBn
OBn N N
N
I C8H17-n
N N conditions
+ N C H -n
8 17 in water BnO
BnO
N
N Ts
Ts OH
OH
95%; 20:1 E:Z
P(t-Bu)2
Fe PdCl2
P(t-Bu)2
Pd(dtbpf)Cl2
O
O conditions O
Cl + (HO)2B O N
in water O
O N
O
O
O
O
86%
discuss a single Pd-catalyzed cross-coupling using a non- this time that I asked both to have a meeting with me in the
ionic surfactant? What was it about PTS that enabled these privacy of my office. I told them diplomatically, but in no
couplings to occur, while so many other surfactants in the uncertain terms, that they are far too talented to be here
Aldrich catalog (cf. Figure 2) were being used, occasionally, doing traditional organic synthesis; that they needed to
on a ‘hit or miss’ basis? This was chemistry truly ‘in water’, think boldly, creatively, and to take chances; that the rules
rather than ‘on water’, and certainly not ‘with water.’1,15 for chemistry in water are different.18 So, they went back to
These are important distinctions to be made early and their labs to dream. Two weeks later they knocked on my
made unequivocally, especially if we wanted to avoid a fu- door, claiming that they had some new chemistry in water
ture ‘debunking’ by Donna Blackmond!16 Ouch! Hence, in that I might find very interesting. As they were entering,
the spirit of total transparency, it can honestly be said that Christophe was too excited and could not control himself,
at that time we had no clue what made PTS special. Tradi- blurting out in his distinctive French accent: ‘How about
tional means of analysis: IR, NMR, mass spectrometry, etc., Negishi couplings in water?’ Hearing this seemingly ridicu-
were not helpful here. Fortunately, on campus, we have a lous claim, I immediately tossed both out of my office,
top-rated Materials Department, and it was time to apply thinking ‘you guys are crazy.’
their tools for gaining insight into our problems. I should have listened to them. It took another two
So, we learned a new word: ‘nanoparticles’ (NPs). To tra- weeks before they would chance this meeting again, but
ditional organic chemists operating in solutions based on this time, they came fully armed with even more data. I lis-
O
O O
I N
TBS
+ N
O TBS
conditions 83%
in aqueous
O TPGS-750-M O
+ Br (2 wt%)
Ph O Ph O
82%
conditions: Cu(OAc)2•H2O (3–5 mol%), Zn powder (4 equiv), TMEDA (2 equiv), AuCl3 (5 mol%), rt
4 Didn’t I Once Say: ‘It’s All about the Figure 6 Structures of ligands based on the oxaphosphole skeleton.
Ligand’?23,28 Cover image reprinted with permission from Angew. Chem. Int. Ed.
2016, 55, 4914. Copyright 2016 Wiley-VCH.
F3C
O
N
F3C O F
N N
O O F F
N
CF3 F3C
O S
H2N O
F3C Me2N F O
N
93%; 1000 ppm catalyst 98%; 500 ppm catalyst 81%; 1000 ppm catalyst 91%; 1000 ppm catalyst
Ar-X, X = Br; Ar’-B(OH)2 Ar-X, X = Br; Ar’-B(OH)2 Ar-X, X = Br; Ar’-B(MIDA) Ar-X, X = Br; Ar’-BF3K
conditions: 1:1 Pd(OAc)2:HandaPhos, Et3N (1.5 equiv), 2 wt% Nok/H2O (0.5 M), rt
DIBAL, toluene
Pd(OAc)2 “hot” (EvanPhos)2Pd(0)
2 EvanPhos, rt
N H O O
S O
N
N N
N N F
NO2 O
OMe
94% (1000 ppm Pd) 87% (1000 ppm Pd) 92% (2500 ppm Pd) 74% (2500 ppm)
B(R)2 = B(OH)2 B(R)2 = B(OH)2 B(R)2 = B(MIDA) B(R)2 = B(OH)2
conditions: (EvanPhos)2Pd (0.10–0.25 mol%), Ar/hetAr–X; X = Br, ArB(R)2 (1.5 equiv), K3PO4•H2O (3 equiv), 2 wt% TPGS-750-M/H2O (0.5 M), 45 °C
Scheme 5 Suzuki–Miyaura (SM) couplings using catalytic (EvanPhos)2Pd in aqueous micellar media
ted to Angewandte Chemie International Edition (ACIE), find- out within, say, the next 100 years or less.8 At issue with
ing its way to a reviewer who took exception to our name HandaPhos (vide supra) is its required 10-step synthesis,30
for this ligand, claiming that any species, known or other- and so we decided to design a new phosphine ligand-con-
S O CN
H
N N N N
Boc H N
N N NH2
O N
O
Boc
94% quant. 70% quant.
(X = Br) (X = Br) (X = Br) (X = Cl)
conditions: (EvanPhos)2Pd (0.10–0.50 mol%), ArX, ArB(OH)2 (1.5 equiv), K3PO4•H2O (3 equiv), EtOAc/toluene/H2O (8:1:1; 0.5 M), 45 °C
use for
Suzuki–Miyaura
couplings in
water
Fe/ppm Pd NPs
derived from TPGS-750-M, Suzuki–Miyaura couplings Our continuing interest in ppm level Pd catalysis next
could be efficiently run, and done so with functionalized turned to the up-and-coming use of aminations of aromatic
educts (Scheme 7). And what was the cost for the Pd associ- and heteroaromatic rings, in particular in medicinal chem-
ated with this new technology, ultimately obtained from istry circles. Although the review by Colacot and Snieckus38
the mining of iron that was converted into FeCl3? $0.00. But almost ten years ago clearly indicated that such C–N bond-
could the same NPs be fashioned by doping 99.999% pure forming reactions were not highly utilized in the first de-
FeCl3 with 320 ppm of a palladium salt and used in the ex- cade of the new millennium, they are now far more popu-
conditions
Ar-X + Ar'-Y Ar-Ar'
conditions: Fe/ppm Pd NPs (320 ppm Pd/reaction), 2 wt% TPGS-750-M/H2O (0.5 M), K3PO4•H2O, rt or 45 °C
COOMe F
N
NH
BnO
O CF3 CF3 F
N
O O
N
Boc N N O2N
BnO N F3C CF3
Ts
O
X = I, Y = B(OH)2 X = Br, Y = Bpin, 86% X = I, Y = BF3K X = Br, Y = B(OH)2
rt, 81% X = I, Y = Bpin, 92% rt, 91% 80%
H
N
O Cy
O O
N F
F O O
NO2 O
S N
O O O
Me
Me N O
O O Cl
N NC TMS
X = Br, 82% X = Br, 75% quant. 83%
O O O
S TIPS
F3C Cl O2N
N N N N
O
O N Cl N Cl N N Cl F3C
H
CF3 CF3
O
CF3 X = I, 80%
X = I, 91% X = Br, 69% 86% 98%
Scheme 8 Different ligands lead to different NPs for heterogeneous Pd-catalyzed couplings. Representative examples of Sonogashira and Mizoroki–
Heck couplings using NPs in water.
tion that if the coupling partner contained an aryl ketone in ganic media (toluene or dioxane), the corresponding imine
addition to the aryl halide partner, a primary amine reacted was formed to the total exclusion of the product of amination
as expected within the nanoparticles in water, while in or- (Scheme 9). Boom! More new rules for chemistry in water.
O O
F F t-Bu t-Bu OTf
conditions P
+ Pd
H2N in water Ph
Br N i-Pr
H
5 g (25.0 mmol) (1.25 equiv) 5.67 g, 99% i-Pr
i-Pr
yield in toluene = 0%
yield in dioxane = 0% pre-catalyst
conditions: [t-BuXPhosPd(π-allyl)]OTf (1000 ppm; pre-catalyst), KO-t-Bu (1.5 equiv), TPGS-750-M/H2O (0.5 M), 45 °C, 45 min
O
t-Bu O N
O NH2
N MeO N
H H
94% 86%
(1000 ppm Pd) (1000 ppm Pd) OMe
O
F Cl
EtO N
N N N MeO N
H H
O
So, again, with all this new chemistry and much more effective protocol was worked out that led to the introduc-
embedded within our manuscript (e.g., including a reaction tion of the nitrile group onto aromatic and heteroaromatic
at the 5+ gram scale; applications of the coupling to make rings. Remarkably, in most cases only 5000 ppm (0.50
six known drug intermediates using far less Pd than that mol%) of a commercially available palladacycle (1) (Scheme
2 (5000–7000 ppm) Ar CN
Ar X Zn(CN)2 NH2
Pd Xantphos
OMs
catalyst 1 (5000–7000 ppm)
Ar CN 1
solvent 2 wt% Brij-30/H2O
up to 99% yield
temperature PMHS, 55–65 °C
2 (15,000–50,000 ppm)
Ar X CN source Ar CN
NH2
(THF) dioxane, H2O
rt to 100 °C Pd t-BuXPhos
catalyst OMs
solvent 2
P(t-Bu)2
i-Pr i-Pr
O
Ph2P PPh2
i-Pr
t-BuXPhos Xantphos
nature of these reviewer remarks, our responses were easily such events were not personal (well, one would at least like
scribed and quickly submitted on a Sunday night. The next to think so), and that the next outcome could even out the
day the paper was accepted, and by that same Monday eve- score; that eventually, we are helping to create a future for
ning it had already appeared as an Accepted Article. catalysis, and it’s in water wherever our work is published.
Overall, though, quite frankly, Bala and Ruchi were This was the best that I could do at the time, but I knew
heartbroken; and so was I for them; this might have been that, with some luck, I might have an ace in the hole. This
their best work yet. In such circumstances, what words can card was not to be played, however, until the outcome of
a mentor offer our students? After days of consideration, it their pending manuscript at ACIE was known. We had an-
occurred to me that in looking back over these past years, other good shot at success with this one, showing the world
that like most in organic chemistry, we have won some and not only how to do Stille couplings in water at the ppm level
lost some. So, my best advice to them was to know that of palladium (500–1000, or 0.05–0.10 mol%), but also dis-
CN CN CN
O N
O
O
CN Cl N
N O N H2N
O
O N
Cl Cl
N
O N O S
O O
O F
65% 79% 76% 68%
O O CN
O CN
CN F3C
N F3C
O N
O O O
N F O
O
N N CN O
N O
O O N
CN N H F3C
N
F
F CF3
41% 80% 98% 65%
Figure 12 Representative late-stage cyanations of educts from the Merck informer library45
H minimizes complexation by N
N
in carbazole by-product formation
Br/I conditions N
Pd PPh3 very inexpensive ligand
Bu3Sn
OMs
O palladacycle 3
O N
N O
O
S Cl
N O
N
N N Cl
N O N
N O N
O
O
O
O O
conditions: 500–1000 ppm palladacycle, 500–1000 ppm PPh3, CuI (5 mol%), TBAC (10 mol%), KF (3 equiv), 2 wt% Brij-30/H2O (0.5 M), 55–60 °C
closing a new palladacycle (3) (Scheme 11)47 that accom- everything’, that there are always exceptions, special cases
plishes these valued couplings where the ligand is Ph3P! with special needs that require alternative solutions. Per-
That’s right, triphenylphosphine. And when the reviews haps that will end up being the situation with chemistry in
came back and both referees rated it as a VIP (very import- an aqueous medium, but let’s not forget that efforts by the
ant paper), ranking it in the top 5% of papers published by community at large have barely begun to think, let alone
this high-profile journal, I immediately shared the news, address, the challenges associated with switching to a wa-
much to their delight. Their faces now acknowledged that ter-based discipline. The chemistry world has yet to buy in,
my earlier comments made to them were not total non- to begin making discoveries and applying the new rules of
sense. All was right again in their chemistry world. And I our evolving trade. Nature is still waiting, maybe even
could breathe a sigh of relief as well, since I really needed laughing at how long it is taking to see what is right there in
both of them to tackle one of the biggest challenges in my front of us. So far, there are no major hurdles to using water
career: The total syntheses of two antimalarial drugs using for chemo-catalysis. If there were, then a big pharma com-
our chemistry in water, assigned to them, as part of the re- pany like Novartis, which through the efforts of process
cently funded project by the Bill and Melinda Gates Founda- chemists in Basel, most notably Fabrice Gallou and Michael
tion.48 Parmentier,51 would have found them during our ongoing
10-year collaboration. And while David Constable, a PhD
synthetic chemist formerly at GSK and currently Senior Di-
6 What are the Implications from These rector at the ACS Green Chemistry Institute rarely forgets to
Tales for Today and Tomorrow? remind me that clean water is not available for use in many
places in the world, that is a very significant but different
This sounds, yet again, like another ‘softball’ question; it challenge facing mankind. For right now and the foresee-
should not be that tough to interpret these events, to see able future, for the locations in the world where chemistry
where chemistry in water is now and what is in store for it is practiced and choices exist, there are no obstacles to
going forward. Let’s consider, on the one hand, what the choosing water. Even the constant concern expressed by
downside might be for companies, and even for those in ac- representatives from a few companies (as members of the
ademia, to make this switch from the use of organic sol- ACS Green Chemistry Institute’s (GCI) Pharma Roundtable
vents to aqueous media.49 And on the other hand, how does (PRT)) that the question of waste water produced using
this approach to the same chemical ends fit within the chemistry in water has yet to be fully addressed, has been
growing wave of sustainability that, finally, is becoming laid to rest by a team from Novartis under the direction of
more in focus, more a topic of discussion, and more rele- Fabrice Gallou.52 Moreover, the old argument that it would
vant than ever before?50 be ‘too costly’ has been thoroughly discredited, as from the
As for the ‘downside’, it is probably rather naïve at least standpoint of economics, we now know unequivocally (e.g.,
for today and the immediate future to think that chemistry from the EPA Presidential Green Chemistry Challenge
in water is going to solve every synthetic problem. We are Awards to several companies each year)53 that going green
all taught at some point that ‘nothing works in the lab for is always favorable in this regard.
And what about sustainability? It’s a topic, finally, that a scenario becoming routine, intermixing both types of re-
we hear about almost every day. Google it and be prepared agents. After all, in addition to the Nobel Prizes of 2018
to spend hours. How does chemistry impact this broad highlighting directed evolution,5 together with the many
term that encompasses, beyond environmental factors, not known applications of natural enzymes to synthesis59 and
only economic but also social aspects? What is our role in the commitment today being made by several major phar-
maintaining ‘sustainable development’, which Wikipedia ma companies to bio-catalysis60…isn’t the future of ‘cataly-
defines as ‘meeting the needs of the present without com- sis’ obvious? No need for descriptors ‘chemo’ and ‘bio’; no
promising the ability of future generations to meet their need, as Paul Anastas has claimed for years, to call this
own needs.’ For the past 200 years of modern organic ‘green’ chemistry. Let’s just call what we do, in water, ‘or-
chemistry we have all but ignored our continuing con- ganic chemistry.’
sumption of natural resources, becoming overly dependent But do traditional organic chemists realize, or even care,
upon petroleum for both solvents and so many chemicals that the know-how to make this happen is already here! Is
used every day. How is it that no one debates the notion it so difficult to envision this; where there is no need for re-
that petroleum reserves are finite, or that our supplies of placement of organic solvent, or its evaporation, with wa-
several transition metals, as well as other elements are ter; no creation of huge waste streams composed of highly
dwindling, and at the current pace of consumption, are mixed organics and aqueous media? To date, notwithstand-
likely to be fully consumed within the next 100 years. What ing their perceived incompatibilities (i.e., between the use
(1) Rh catalysis
wards enzymes (especially those with metals). Imagine: All many important reactions now doable in water to create an
that by just adding a well-tolerated surfactant to the wa- undergraduate lab Manual that will bring the same level of
ter!66 pedagogy to sophomore organic labs, but with experiments
Conflict of Interest (12) Lipshutz, B. H.; Taft, B. R. Org. Lett. 2008, 10, 1329.
(13) Lipshutz, B. H.; Petersen, T. B.; Abela, A. R. Org. Lett. 2008, 10,
The author declares no conflict of interest. 1333.
(14) Dwars, T.; Paetzold, E.; Oehme, G. Angew. Chem. Int. Ed. 2005,
44, 7174.
Funding Information (15) Hayashi, Y. Angew. Chem. Int. Ed. 2006, 45, 8103.
(16) Blackmond, D. G.; Armstrong, A.; Coombe, V.; Wells, A. Angew.
The author is grateful to Novartis and the US National Science Foun-
Chem., Int. Ed. 2007, 46, 3798.
dation (18-56406).Novartis()NonalScienFoundatio(18-5640)
(17) Myers, D. Surfactant Science and Technology, 3rd ed. 2006.
(18) Lipshutz, B. H. Curr. Opin. Green Sustainable Chem. 2018, 11, 1.
(19) Duplais, C.; Forman, A. J.; Baker, B. A.; Lipshutz, B. H. Chem. Eur.
Acknowledgement J. 2010, 16, 3366.
It continues to be both an honor and privilege to work with so many (20) (a) Breton, G. W.; Shugart, J. H.; Hughey, C. A.; Conrad, B. P.;
students over the past 15 years who have the passion and who share Perala, S. M. Molecules 2001, 6, 655. (b) Li, C.-J. Tetrahedron
the vision for what all of us see must be the future of organic chemis- 1996, 52, 5643.
try. It has also been our good fortune to have attracted the needed fi- (21) (a) Krasovskiy, A.; Duplais, C.; Lipshutz, B. H. J. Am. Chem. Soc.
nancial support to make this chemistry in water a reality. The 2009, 131, 15592. (b) See also: Duplais, C.; Krasovskiy, A.;
companies that believe in our mission, and to which we are truly Lipshutz, B. H. Organometallics 2011, 30, 6090.
grateful, include: Novartis, PHT International, Anthem Biosciences, (22) See, as examples: (a) Lipshutz, B. H. Synthesis 1987, 325.
(42) Friis, S. D.; Johansson, M. J.; Ackermann, L. Nat. Chem. 2020, 12, (57) (a) See (accessed Feb 19, 2021): https://communities.acs.org/
511. community/science/sustainability/green-chemistry-nexus-
(43) Zhao, D.; Xu, P.; Ritter, T. Chem 2019, 5, 97. blog/blog/2020/03/26/the-recipient-of-the-2020-peter-j-dunn-
(44) Uehling, M. R.; King, R. P.; Krska, S. W.; Cernak, T.; Buchwald, S. award-for-green-chemistry-engineering-impact-in-the-phar-
L. Science 2019, 363, 405. maceutical-industry (b) See also: Bailey J. D., Helbling E.,
(45) Kutchukian, P. S.; Dropinski, J. F.; Dykstra, K. D.; Li, B.; DiRocco, Mankur A., Stirling M., Hicks F., Leahy D. K.; Green Chem.; 2021,
D. A.; Strekfuss, E. C.; Campeau, L.-C.; Cernak, T.; Vachal, P.; 23: 788.
Davies, I. W.; Krska, S. W.; Dreher, S. D. Chem. Sci. 2016, 7, 2604. (58) See (accessed Feb 19, 2021): https://www.usatoday.com/
(46) Thakore, R. R.; Takale, B. S.; Singhania, V.; Gallou, F.; Lipshutz, B. story/life/movies/2016/12/12/jerry-maguire-anniversary-tom-
H. ChemCatChem 2021, 13, 212. cruise-show-me-money/95300458
(47) Takale, B. S.; Thakore, R. R.; Casotti, G.; Li, X.; Gallou, F.; (59) Hauer, B. ACS Catal. 2020, 10, 8418.
Lipshutz, B. H. Angew. Chem. Int. Ed. 2021, 60, 4158. (60) See, as examples: (a) An, C.; Shaw, M. H.; Tharp, A.; Verma, D.;
(48) See (accessed Feb 19, 2021): https://www.news.ucsb.edu/2020/ Li, H.; Wang, H.; Wang, X. Org. Lett. 2020, 22, 8320. (b) Wu, B.;
019977/fighting-malaria-sustainably Zhang, S.; Hong, T.; Zhou, Y.; Wang, H.; Shi, M.; Yang, H.; Tian,
(49) Lipshutz, B. H. J. Org. Chem. 2017, 82, 2806. X.; Guo, J.; Bian, J.; Roache, J.; Delgado, P.; Mo, R.; Fridrich, C.;
(50) See (accessed Feb 19, 2021): https://www.coons.sen- Gao, F.; Wang, J. Org. Process Res. Dev. 2020, 24, 2780.
ate.gov/news/press-releases/senate-passes-sen-coons-biparti- (61) (a) Wang, Y.; Zhao, H. Catalysts 2016, 6, 194. (b) Huang, X.; Cao,
san-bill-backed-by-delaware-companies-to-promote-sustain- M.; Zhao, H. Curr. Opin. Chem. Biol. 2020, 55, 161.
able-chemistry (62) See, as examples: (a) Dander, J. E.; Giroud, M.; Racine, S.; Darzi,