Arroz A PHB 2

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Research Article

Received: 6 February 2016 Revised: 16 March 2016 Accepted article published: 8 April 2016 Published online in Wiley Online Library:

(wileyonlinelibrary.com) DOI 10.1002/jctb.4993

Conversion of rice husks to


polyhydroxyalkanoates (PHA) via a three-step
process: optimized alkaline pretreatment,
enzymatic hydrolysis, and biosynthesis by
Burkholderia cepacia USM (JCM 15050)
King-Sern Heng,a Rajni Hatti-Kaul,b Farook Adam,c Toshiaki Fukuid and
Kumar Sudesha*

Abstract
BACKGROUND: Rice husks (RH) are agricultural residues with abundant storage of cellulose and hemicellulose, making them
a potential feedstock for polyhydroxyalkanoate (PHA) production. In this study, optimization of pretreatment with alkali
under various conditions was performed before enzymatic hydrolysis using Celluclast 1.5 L (EC 3.2.1.4) and Novozyme 188 (EC
3.2.1.21). The hydrolysate was fed to two strains, Burkholderia cepacia USM (JCM 15050) and Cupriavidus necator NSDG-GG, an
engineered strain of Cupriavidus necator H16, to evaluate their PHA production.

RESULTS: Pretreatment of RH using 1.0 mol L−1 potassium hydroxide (KOH) at high temperature and pressure (HTP) (121 ∘ C, 0.1
MPa) gave maximum sugar yield of up to 87% (per total carbohydrate content) after optimized enzymatic hydrolysis, whereby
the undiluted hydrolysate contained approximately 20 g L−1 total reducing sugars (TRS). B. cepacia USM utilized the hydrolysate
more efficiently compared with C. necator NSDG-GG, with a maximum cell dry weight (CDW) of 4.9 g L−1 and 40 wt% PHA at
shake-flask scale. The CDW and PHA content of B. cepacia USM cultivated in a 5 L fermentor were 7.8 g L−1 and 50%, respectively.
The decrease in total phenolics at the end of fermentation suggested that B. cepacia USM was able to metabolize phenolic
compounds.

CONCLUSION: Through optimized alkali pretreatment and enzymatic hydrolysis, RH has the potential to be converted to PHA by
B. cepacia USM, thus valorizing this agricultural by-product.
© 2016 Society of Chemical Industry

Supporting information may be found in the online version of this article.

Keywords: rice husks; alkali pretreatment; Burkholderia cepacia; polyhydroxyalkanoate

INTRODUCTION Agricultural biomass is mainly composed of lignocellulose,


Polyhydroxyalkanoate (PHA) is a type of biodegradable polyester which provides plants mechanical support and protection.3 In
synthesized within bacterial cells. Under nutrient-limited condi- order to perform such functions, lignocellulosic biomass is very
tions but with an excess of carbon, these intracellular inclusions
are accumulated as energy and carbon storage for the cells.1 PHAs
∗ Correspondence to: K Sudesh, School of Biological Sciences, Universiti Sains
have industrial significance owing to their mechanical properties
Malaysia, 11800 Penang, Malaysia. Email: ksudesh@usm.my
that are comparable with petrochemically derived plastics such
as polypropylene (PP) and polyethylene (PE). In addition, PHAs a School of Biological Sciences, Universiti Sains Malaysia, 11800 Penang,
are biodegradable, further highlighting their potential as an alter- Malaysia
native to synthetic plastics.2 In an effort to make commercializa-
b Biotechnology, Center for Chemistry and Chemical Engineering, Lund Univer-
tion of PHAs more viable, researchers have looked towards using sity, P.O. Box 124, SE-22100 Lund, Sweden
waste products as carbon source. Plant-based sources of sugars
are abundant in nature, however, sugars that are easily available c School of Chemical Sciences, Universiti Sains Malaysia, 11800 Penang,
such as sucrose or fructose are often used in the food industry. Malaysia
Therefore, utilization of inedible plant materials, such as agricul- d Department of Bioengineering, Graduate School of Bioscience and Biotech-
tural biomass, is the more feasible choice of feedstock for PHA nology, Tokyo Institute of Technology, 4259 Nagatsuta, Midori-ku, Yokohama
production. 226-8501, Japan

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www.soci.org K-S Heng et al.

stable and recalcitrant, making conversion of biomass to fer- duration for each pretreatment, the mixture was filtered and the
mentable sugars a challenging endeavor. As such, additional solid fraction was washed thoroughly with distilled water until
processes to pretreat the biomass are required to make the sugars the pH was approximately 7.0 ± 0.5. The washed solid fraction
more accessible. Among the many pretreatment methods that was then oven-dried until all excess moisture was removed. The
have been tested, alkali pretreatment has been extensively stud- efficiencies of each pretreatment were evaluated based on total
ied, mostly owing to its ability to remove large quantities of lignin reducing sugar yield after enzymatic hydrolysis, expressed based
from biomass.4 on the total carbohydrate content in the untreated raw material.
Rice husks (RH) are a type of residual agricultural biomass,
obtained from the rice milling process as the paddy is converted Thermogravimetric analysis (TGA)
to rice. The RH account for up to 20% of the paddy harvest.5 Rice
Thermogravimetric analysis (TGA) was performed using TGA7
is one of the largest food sources in the world. According to the
thermoanalyzer (Perkin-Elmer, United States). Approximately
Food and Agricultural Organization of the United Nations (FAO),
10 mg of dry RH samples were heated from 30 ∘ C to 920 ∘ C under
the worldwide paddy production has been increasing at a steady
continuous N2 flow at a heating rate of 20 ∘ C min−1 . The differ-
rate each year since 2002.6 Paddy production in Malaysia was 2.5
ences in composition of the RH samples were taken based on
million tonnes in 2010 and rose to more than 2.6 million tonnes
percentage weight loss at specific ranges of temperature.
in 2014.7 The increasing amount of RH generated presents a
problem in disposal management. Incineration of the rice residues
appeared to be the most common method of disposal in Southeast Enzymatic hydrolysis
Asian countries, with only a small amount being used as fuel.8 The alkaline-pretreated RH were used as substrates for enzymatic
Development of a proper and sustainable method of agricultural hydrolysis. In the initial evaluation of RH pretreatment under var-
waste management is crucial to address the environmental issues ious conditions, only Celluclast 1.5 L (Novozyme, Denmark) was
caused by incineration. One possible method is to convert the used at an enzyme loading of 5.0% (v/v) with substrate loading
polysaccharides present in the RH into fermentable sugars. of 5.0% (w/v). The RH pretreated under optimum conditions was
The present study was aimed at production of PHA from sugars then selected as the substrate for further experiments on enzy-
present in RH through a systematic three-step process. The RH matic hydrolysis. Optimized enzyme loading of Celluclast 1.5 L and
were first pretreated with alkali under different conditions to Novozyme 188 (Novozyme, Denmark) was 1.0% (v/v) and 0.25%
determine the combination method which results in highest sugar (v/v), respectively, with substrate loading of 2.5% (w/v) (refer to
yield upon enzymatic hydrolysis. The potential of the hydrolysate Supporting information). A 0.05 mol L−1 citrate buffer (pH 4.8) was
as a feedstock for bacterial synthesis of PHA was evaluated based used for all enzymatic reactions. The reaction mixture was incu-
on cell biomass and PHA accumulation in two selected strains, B. bated at 50 ∘ C with agitation at 160 rpm for 72 h. At the end of
cepacia USM and C. necator NSDG-GG. The strain showing the most incubation, the reaction mixture was filtered through a What-
efficient utilization of the hydrolysate was used for fermentation man No.1 filter paper to separate the solid substrate and enzy-
to investigate the possibility of scale-up PHA production on this matic hydrolysate. The hydrolysate was then filtered through a
carbon source. 0.2 μm cellulose acetate membrane filter using vacuum filtration
to remove smaller particles. Sterilization of the hydrolysate prior
to use in bacterial cultivation was performed at 121 o C and 0.1 MPa
EXPERIMENTAL for 15 mins using hydrolysates with pH 4.8 and pH 7.0 to observe
Raw material the effect of pH on the composition of sugars. Based on the results,
The RH used in this study was obtained from Kim Thye Leong the hydrolysate for all subsequent biosynthesis experiments was
Rice Mill Sdn. Bhd., Kepala Batas, Pulau Pinang, Malaysia. The RH autoclaved at pH 4.8.
was washed with tap water, sun-dried, and kept in plastic bags
at room temperature until further use. Compositional analysis of Microorganisms
the untreated RH was carried out following the protocols of the The bacterial strains used in this study were B. cepacia USM
National Renewable Energy Laboratory (NREL).9 (JCM 15050), isolated from wastewater polluted with oil10 and
C. necator NSDG-GG. The strain NSDG-GG is a glucose-utilizable
Alkali pretreatment engineered strain of the wild strain H16, having modifications in
nag operon and replacement of phaC by a mutant gene phaC
For all pretreatment experiments, the solid loading of the RH was
derived from Aeromonas caviae on the chromosome.11,12 The cells
kept constant at 6% (w/v). The concentrations of alkali used were
were maintained on nutrient rich (NR) medium with 25% glycerol
0.1 mol L−1 and 1.0 mol L−1 for both sodium hydroxide (NaOH) and
at −80 ∘ C.
potassium hydroxide (KOH). Three different pretreatment condi-
tions were tested; room temperature (RT), microwave irradiation
(MI), and high temperature and pressure (HTP). The mixture of Media
RH and alkali was agitated at a speed of 200 rpm for 24 h at RT The composition of the NR medium (pH 7.0) was as follows (per
(26 ± 4 ∘ C). Pretreatment using a combination of alkali and MI was L): 10 g meat extract, 10 g peptone, and 2 g yeast extract. The
performed by placing a mixture of RH and alkali in a tabletop mineral salts medium (MM) composition (pH 7.0) for B. cepacia
microwave oven (LG Electronics, South Korea). The microwave fre- USM was as follows (per L): 3.32 g Na2 HPO4 , 2.8 g KH2 PO4 , 0.25 g
quency was 2450 MHz and the power was set at 700 W. The pre- Mg2 SO4 ·7H2 O, and 1 mL trace elements.13 The trace elements
treatment duration was kept constant at 15 mins. Pretreatment solution contained (per L): 0.22 g CoCl2 ·6H2 O, 9.7 g FeCl3 , 7.8 g
using a combination of alkali and HTP was performed in an auto- CaCl2 , 0.12 g NiCl2 ·6H2 O, 0.11 g CrCl3 ·6H2 O, 0.16 g CuSO4 ·5H2 O
clave unit (Hirayama, Japan), whereby the mixture of RH and alkali in 0.1 N HCl.14 For C. necator NSDG-GG, the composition of MM
was pretreated at 121 ∘ C and 0.1 MPa for 15 mins. After the set (pH 6.8) was as follows (per L): 4.0 g NaH2 PO4 , 4.6 g Na2 HPO4 , 0.45 g

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Conversion of rice husks to PHA via a three-step process www.soci.org

K2 SO4 , 0.39 g Mg2 SO4 , 0.062 g CaCl2 , and 1 mL trace elements. Dionex CarboPac PA-20 analytical column attached to a Dionex
The trace elements were composed of (per L): 15 g FeSO4 ·6H2 O, CarboPac PA-20 guard column (Thermo Fisher Scientific, United
2.4 g MnSO4 ·H2 O, 2.4 g ZnSO4 ·7H2 O, and 0.48 g CuSO4 ·5H2 O in States). The mobile phase was 0.75 mmol L−1 NaOH with the flow
0.1 N HCl.15 Ammonium chloride (NH4 Cl) and urea were used as rate of 0.5 mL min−1 . The column was regenerated at the end of
nitrogen sources and tested at varying concentrations. In control each cycle with 200 mmol L−1 of NaOH for 4 min. The flow rate was
experiments, pure glucose was used as carbon source and was the same for regeneration.
fed at a concentration of 20 g L−1 . For biosynthesis experiments
using RH hydrolysate, the hydrolysates containing approximately Determination of cell dry weight (CDW)
20 g L−1 total reducing sugars (TRS) were used in place of MM and
The cells were harvested by centrifugation at 8000 rpm for 10 min
either NH4 Cl or urea was added as nitrogen source, and adjusted
at 4 ∘ C. The cells were washed twice with distilled water and frozen
to pH 7.0 for B. cepacia USM and pH 6.8 for C. necator NSDG-GG
overnight at −20 ∘ C. The cells were then lyophilized and the weight
prior to inoculation. The pH for all media was adjusted using
of the dried cells was determined.
hydrochloric acid (HCl) or sodium hydroxide (NaOH).

Gas chromatography (GC) analysis for PHA content


Cultivation of cells in shake flasks
GC analysis was performed to determine the PHA content in the
Microbial culture was carried out at shake flask scale using a
cells. Samples were prepared as described previously.18 Briefly,
one-stage cultivation strategy. Pre-inoculation was done by cul-
2 mL methanol acidified with 15% (v/v) H2 SO4 and 2 mL chlo-
tivating the cells in (NR) medium at 37 ∘ C for B. cepacia USM
roform were added to approximately 10 mg of lyophilized cells.
and 30 ∘ C for C. necator NSDG-GG accompanied by agitation at
Methanolysis was carried out at 100 ∘ C for 140 mins to allow the
200 rpm. When OD600 nm = 4.0, 3% (v/v) of inoculum was transferred
conversion of PHA monomers to their corresponding hydroxyacyl
to MM or hydrolysates to induce PHA production.
methyl esters. Upon completion of methanolysis, the mixture was
cooled to room temperature and 1 mL distilled water was added.
Cultivation of B. cepacia USM in fermentor The mixture was vortexed until two phases were formed, a lower
From the results obtained at shake-flask scale, B. cepacia USM was chloroform phase and an upper aqueous phase. Samples for GC
selected for further fermentation experiments. Batch fermentation analysis were taken from the lower chloroform phase. Caprylic
of B. cepacia USM was performed in a 5 L fermentor (Infors HT, methyl ester (CME) was added to the samples as an internal stan-
Switzerland) with a 40% working volume. The experimental run dard at a ratio of 1:1. Analysis was carried out using a GC-2010 Gas
was performed using hydrolysate and supplemented with urea at Chromatograph (Shimadzu, Japan) equipped with a Supelco SPB-1
0.54 g L−1 . As a comparison, MM was used with the addition of column (Sigma-Aldrich, United States) operated at a temperature
20 g L−1 glucose as carbon source with the addition of 0.54 g L−1 of 280 ∘ C. An AOC-20i autoinjector (Shimadzu, Japan) was used
urea. The inoculum was prepared by growing the cells in NR broth with a temperature of 270 ∘ C. The carrier gas was N2 with a flowrate
for 24 h, as carried out for shake flask cultivation, and added at of 14 mL min−1 . Detection was performed using a flame ionization
10% of the working volume. The pH of the medium was set at 7 detector (FID) with a temperature of 280 ∘ C. Data from the analy-
and regulated by addition of NaOH or HCl. The temperature was sis were obtained from GC Solution Version 2.30.00 SU3 software
maintained at 37 ∘ C. The airflow rate was set at 1 vvm. Impeller (Shimadzu, Japan).
speed was set on cascade mode to allow an air saturation level of
40% dissolved oxygen. Fermentation was performed over a period
of 48 h. RESULTS
The composition of the RH used in this study is shown in Table 1.
The total carbohydrate content in the RH was 52% (35% cellulose
ANALYTICAL METHODS and 17% hemicellulose) and the lignin content was 26% on an
Determination of total reducing sugars (TRS) extractives-free basis. The ash content was determined to be 15%.
The TRS content in the hydrolysate was determined by Based on Fig. 1, under RT conditions, the pretreatment of NaOH
3,5-dinitrosalicylic acid (DNS) assay.16 The TRS yields were at 1.0 mol L−1 resulted in total reducing sugar yield of 28% per
expressed based on the total carbohydrate content in the total carbohydrate content in the RH. This was two-fold the yield
untreated RH, which was approximately 52% as determined obtained from using 0.1 mol L−1 NaOH at RT, which was only 13%.
by compositional analysis in this study. The use of NaOH with MI for 0.1 mol L−1 and 1.0 mol L−1 resulted
in 24% and 35% sugar yield, respectively. Further increase in
sugar yield from the RH was observed when HTP was used in
Determination of total phenolics
combination with NaOH, and was 34% for 0.1 mol L−1 and 62% for
The amount of total phenolics in the hydrolysate was determined
1.0 mol L−1 . At RT, the use of KOH resulted in higher sugar yield
using the Folin–Ciocalteu assay.17 Total phenolics in the samples
than NaOH, with a maximum of 22% and 32% for 0.1 mol L−1 and
were expressed as milligrams of gallic acid equivalents (GAE) per
1.0 mol L−1 , respectively. Pretreatment with 1.0 mol L−1 KOH and
liter based on the standard curve of gallic acid.
MI resulted in 42% yield of sugars, which was 12% more than the
yield obtained with 0.1 mol L−1 KOH and MI, i.e. 30%. Pretreatment
Determination of monosaccharides using 1.0 mol L−1 KOH with HTP resulted in the highest sugar yield,
Determination of monosaccharides in the hydrolysate was per- i.e. 70% of total carbohydrate content. It is also interesting to note
formed using high performance anion-exchange chromatogra- that the use of 0.1 mol L−1 KOH and HTP resulted in 60% sugar
phy (HPAEC) equipped with a GP50 gradient pump and AS50 yield, which is comparable with the yield from 1.0 mol L−1 NaOH
autosampler. Detection was performed using an ED40 electro- and HTP, thus indicating the higher efficiency of KOH in pretreating
chemical detector. The monosaccharides were quantified with a the RH.

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www.soci.org K-S Heng et al.

100
Table 1. Composition of the RH used in this study
90 (A) Untreated
Component Composition (%) (B) 1 M NaOH/HTP
80
(C) 1 M KOH/HTP
Total solids* 92.6 70
Structural carbohydrates* Cellulose 34.7

Weight (%)
60
Hemicellulose 17.4
Total 52.1 50
Lignin* Acid soluble lignin 2.3 40
Acid insoluble lignin 23.2 30 (A)
Total 25.5
20 (B)
Ash* 15.0
10 (C)
Moisture* 7.4
Extractives Water extractives 7.2 0
Alcohol extractives 2.0 30 100 200 300 400 500 600 700 800 900
Total 9.2 Temperature (°C)

*Values for each of the components were calculated on an Figure 2. TGA thermograms of untreated RH, RH pretreated with
extractives-free basis. 1.0 mol L−1 NaOH/HTP, and RH pretreated with 1.0 mol L−1 KOH/HTP. The
temperature was increased from 30 ∘ C to 900 ∘ C at a heating rate of
20 ∘ C min−1 .
80
h
RT
Yield of total reducing sugars (%)

70 Table 2. TRS content in RH hydrolysate before and after autoclaving


MI g g
60 HTP at different pH

50 RH hydrolysate pH TRS (g L−1 )* Total phenolics (mg L−1 GAE)**


f
40 e e Before autoclaving 4.8 20.0 ± 0.3 91.3 ± 0.4
c c d
30 b b After autoclaving 4.8 19.5 ± 0.4 94.1 ± 0.1
After autoclaving 7.0 10.0 ± 0.2 147.3 ± 0.6
20 a
RH, rice husk; TRS, total reducing sugars.
10
*TRS determined from DNS assay expressed as an average of three
0 replicates.
0.1 M NaOH 1.0 M NaOH 0.1 M KOH 1.0 M KOH **Total phenolics expressed as milligrams gallic acid equivalents (GAE)
Pretreatment combinations per L, average of three replicates.

Figure 1. Effect of different NaOH and KOH pretreatment conditions on


yield of total reducing sugars after 72 h of enzymatic hydrolysis. Yields of
total reducing sugars were obtained from mean sugar concentrations of by autoclaving resulted in about 50% sugar loss when the pH of
triplicate samples and calculated based on total structural carbohydrates the hydrolysate was 7.0. No significant loss of sugars was observed
in the untreated raw material. Mean values indicated by different letters when the hydrolysate with pH 4.8 was autoclaved.
are significantly different. Error bars indicate standard deviation.
From HPAEC analysis, the monosaccharides present in the RH
hydrolysate at pH 4.8 were determined to be glucose, xylose, and
To evaluate the effects of the two alkalis on the compositional arabinose (Fig. 3). Glucose was present in the highest proportion,
changes of the RH, TGA was performed and the resulting ther- which was approximately 80%, followed by 15% xylose and 5%
mograms are illustrated in Fig. 2. After initial weight loss due to arabinose. The loss of sugars observed when the hydrolysate was
moisture, the untreated RH samples witnessed a weight loss of autoclaved at pH 7 was also reflected in the chromatogram. It
50% at 370 ∘ C. This percentage weight loss was in agreement with was also interesting to note that the formation of other monosac-
the total structural carbohydrates determined by compositional charides, i.e. fructose and mannose, was observed. However, the
analysis, which was 52%. At this stage of decomposition for the peaks corresponding to these sugars were low, indicating that
pretreated samples, the RH pretreated with NaOH/HTP showed a their presence was negligible. Thus, the hydrolysates were steril-
weight loss of 60%, while the RH pretreated with KOH/HTP showed ized at pH 4.8 for all subsequent biosynthesis experiments to main-
a weight loss of 70%. Above 370 ∘ C, the weight loss was 20% for tain the sugar content.
RH pretreated with NaOH/HTP compared with 30% for untreated Table 3 shows the CDW and PHA content of B. cepacia USM and
RH. Only 10% weight loss was observed for RH pretreated with C. necator NSDG-GG cultivated on hydrolysate. As a large propor-
KOH/HTP at this stage, signifying that this pretreatment was able tion of the TRS in the hydrolysate was glucose, pure glucose was
to remove higher amounts of lignin. At the end of heating, the used as a comparison. It was found that B. cepacia USM had higher
percentage of remaining solid material in untreated RH samples CDW when cultivated on hydrolysate, which was 4.9 g L−1 com-
was approximately 20%, while for NaOH/HTP pretreated samples, pared with 4.7 g L−1 when glucose was used, although the PHA
only 12% of material remained undegraded. Meanwhile, the RH content was lower (40 wt %) when grown on the hydrolysate. C.
pretreated with KOH/HTP had approximately 5% solid material necator NSDG-GG showed high CDW (10.4 g L−1 ) and PHA content
remaining. (70 wt%) when grown on pure glucose, but showed significantly
Based on analysis of TRS, the RH hydrolysates contained approx- lower growth on the hydrolysate, i.e. 3.7 g L−1 CDW and 38 wt%
imately 20 g L−1 sugars (Table 2). Sterilization of the hydrolysates PHA content.

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Conversion of rice husks to PHA via a three-step process www.soci.org

Figure 3. HPAEC chromatogram of monosaccharides detected in the RH hydrolysate before and after heat sterilization at pH 7.0.

Table 3. Growth and PHA accumulation of Burkholderia cepacia USM (JCM 15050) and Cupriavidus necator NSDG-GG on glucose or RH hydrolysate
supplemented with 0.54 g L−1 urea

B. cepacia USM C. necator NSDG-GG


Carbon source* CDW (g L−1 ) PHA content (wt%) CDW (g L−1 ) PHA content (wt%)

Glucose 4.66a ± 0.05 48x ±3 10.38b ± 0.12 70y ± 3


Hydrolysate 4.85c ± 0.06 40x ±2 3.68d ± 0.06 38x ± 7

*Carbon sources were added at a concentration of 20 g L−1 TRS.


Mean values indicated by different superscript letters are significantly different.

To determine the effect of different nitrogen sources on B. DISCUSSION


cepacia USM, NH4 Cl and urea were supplemented at concen- The conversion of lignocellulosic biomass to fermentable sugars
trations of 0.5 g L−1 and 0.27 g L−1 , respectively, equivalent to offers a promising alternative to reduce the cost of carbon feed-
0.009 mol N. Based on Table 4 it was determined that urea was stock in the quest to make PHA production viable at a commercial
a better nitrogen source than NH4 Cl for growth, with increases level. The abundance of RH as residues of the rice milling industry
in CDW when supplemented for both glucose and hydrolysate. has spurred interest in evaluating its potential as a carbon source
However, the PHA content was reduced from 72 wt% to 62 wt%
for PHA production. The RH composition reported in other studies
when urea was added to the hydrolysate compared with NH4 Cl.
had a cellulose content ranging from 34 to 40% and hemicellu-
Similar to the results in Table 3 it was found that cultivation
lose content from 12 to 18%, while the lignin content ranged from
of B. cepacia USM on hydrolysate improved the growth and
15 to 25%.19 – 22 Variations in the RH composition may be due to
PHA accumulation of the cells compared with glucose. From GC
many factors such as the physico-chemical properties of the soil
analysis, it was found that only P(3HB) was synthesized by the
where the paddy is planted or the variety of the paddy. In this
cells.
Fermentation in a 5 L fermentor using RH hydrolysate and urea study, the yield of sugars from enzymatic hydrolysis was calculated
(0.54 g L−1 ) resulted in significant improvements in growth and based on the total carbohydrate content, which indicated the max-
PHA content compared with shake-flask results (Fig. 4(a)). The imum theoretical amount of sugars that can ideally be obtained
maximum CDW increased almost 2-fold to 7.8 g L−1 , with PHA from the RH.
content of 50 wt%. The TRS was completely consumed at 36 h, To make the cellulosic components in the RH more accessi-
proving that B. cepacia USM was able to efficiently consume all ble to enzymatic hydrolysis, the alkali pretreatment was per-
the sugars present in the hydrolysate. In contrast, fermentation formed under highly pressurized thermal conditions. This enabled
using pure glucose resulted in a maximum CDW of 4.2 g L−1 at removal of significant amounts of lignin and rapid decompression
24 h, while maximum PHA content was 49 wt% at 36 h (Fig. 4(b)). of the cellulose fibers. Alkali pretreatment is less severe than other
Notably, the total phenolics remaining in the hydrolysate at the chemical methods and is sometimes performed at ambient tem-
end of fermentation witnessed a 50% decrease (Fig. 4(a)). No perature. However, this results in longer reaction periods, which
phenolic content was detected in the fermentation broth when may require several days when done without the addition of any
pure glucose was used. physical or thermal methods.4,23 Such processes may not be time

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www.soci.org K-S Heng et al.

Table 4. Growth and PHA accumulation of Burkholderia cepacia USM (JCM 15050) on glucose and RH hydrolysate supplemented with different
nitrogen sources

Carbon source* Nitrogen source** CDW (g L−1 ) PHA content (wt%) Total PHA (g L−1 )

Glucose NH4 Cl 1.71a ± 0.07 49x ± 2 0.85 ± 0.04


Hydrolysate NH4 Cl 2.66b ± 0.16 72y ± 3 1.92 ± 0.12
Glucose Urea 2.15c ± 0.02 50x ± 4 1.07 ± 0.07
Hydrolysate Urea 3.80d ± 0.06 62x ± 1 2.35 ± 0.11

*Carbon sources were added at a concentration of 20 g L−1 TRS.


**Nitrogen sources were added at a concentration of 0.5 g L−1 NH4 Cl and 0.27 g L−1 urea, equivalent to 0.009 mol N.
Mean values indicated by different superscript letters are significantly different.

(a) swelling refers to penetration that occurs in the crystalline


region.27 Although hemicellulose is also solubilized by alkaline
treatment, retention of a large fraction of hemicellulose in the
solid residue has been reported in several studies. In addition,
alkaline pretreatment is able to remove side chain groups of
hemicellulose, thus increasing the accessibility of enzymes to
the polysaccharide chains.28,29 However, the use of alkali alone
without any physical methods did not appear to be efficient in
pretreating the RH, as the maximum sugar yield obtained was less
than half of the available carbohydrates.
Investigations into the effect of irradiation as a form of biomass
pretreatment was reported in an early study by Ooshima and
colleagues whereby rice straw and bagasse were irradiated using
microwaves without the addition of any chemicals apart from
water.30 From their study, it was suggested that irradiation was
superior in improving digestibility of biomass because the material
was able to absorb kinetic energy directly, compared with other
(b)
thermal methods like steam pretreatment. A study by Li and col-
leagues found that microwave pretreatment was able to decrease
the crystallinity of cellulose.31 Thus, the increase in sugar yield
from RH when a combination of alkali and MI was applied could be
due to the breakdown of the rigid crystalline structure, compared
with the alkali pretreatment at room temperature. Although both
methods provide heating, improvements using the HTP method
over MI could be related to the rapid compression and decom-
pression of the fibers in biomass caused by the highly pressurized
environment. Thus, this method not only enhances leaching of
silica and delignification in the rice husks, it also loosens the cellu-
lose micro- and macro-fibrils. Autoclave usage was also reported
in studies involving pretreatment of rice husks with dilute acids19
and lime32 to achieve a temperature of 121 ∘ C. In their work with
Figure 4. Batch fermentation of B. cepacia USM in (a) RH hydrolysate woody biomass, Bozell and coworkers33 used autoclaving as a
autoclaved at pH 4.8 (equivalent to 20.0 g L−1 TRS), and (b) pure glucose
means of fractionation of the main lignocellulosic components.
(20.0 g L−1 ). Error bars indicate standard deviation.
Furthermore, Gabriele et al. coined the term ‘DiCoDe’ process,
which stands for digestion, compression, and decompression,
or cost effective. Thus, an additional thermal method was supple- to describe a novel method for extracting cellulose fibers from
mented in this study to increase the efficiency of the pretreatment Spartium junceum L. using an autoclave unit.34
process. The use of NaOH in pretreatment has been extensively The TGA thermograms also indicate the efficiency of the pre-
studied on a variety of biomasses. Nonetheless, KOH has been treatment based on the compositional percentage of the RH. Over-
gaining attention as another alkali for efficient pretreatment of lig- all, three main stages of decomposition were observed. The weight
nocelluloses including rice straw.24,25 loss in the first stage, from 30 ∘ C to 150 ∘ C, was attributed to mois-
It has been suggested that alkalis act by degrading the bonds ture. The second stage, from approximately 150 ∘ C to 370 ∘ C, was
between hemicellulose and lignin, thus destroying the native due to structural carbohydrates (cellulose and hemicellulose). The
lignin structure.26 Furthermore, alkalis are able to chemically third stage of decomposition occurred from 370 ∘ C onwards and
modify cellulose by ionizing the hydroxyl groups, resulting in a was attributed mostly to the lignin content.35 The residue remain-
‘swelling’ effect that increases the surface area for enzymes to bind ing at the end of heating was believed to be composed of char and
and initiate hydrolysis. Interfibrillar swelling refers to penetration ash, which is mostly made up of silica.36 The decomposition pro-
of aqueous alkali in the amorphous region, while intrafibrillar files observed for RH pretreated with alkali and MI (data not shown)

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Conversion of rice husks to PHA via a three-step process www.soci.org

were similar to that of RH pretreated with alkali and HTP. Thus, the this problem can be overcome by using robust strains that are
thermogram of RH pretreated with HTP was used as a represen- able to utilize a wide range of compounds. Burkholderia cepa-
tation. It was interesting to note that the residue from KOH/HTP cia USM has been reported to be a nutritionally-versatile strain,
pretreated RH was the lowest, which indicated that more lignin as it is able to grow on a variety of sugars and oils.10 In the
and silica were removed with this combination of pretreatment present study, the CDW increased when the cells were cultivated
compared with NaOH/HTP. This could explain the increase in sugar on RH hydrolysate compared with pure glucose, indicating that
yield from RH pretreated with KOH/HTP, as the removal of higher other components in the hydrolysate such as citrate were metab-
amounts of lignin and ash could have enhanced the accessibility of olized by B. cepacia USM and were capable of promoting cell
enzymes to the carbohydrates. Thus, the results suggest that KOH growth.
is more effective in delignification compared with NaOH. The phenolic compounds detected in the hydrolysate could have
Characterization of the hydrolysate was an important aspect of a negative effect on the growth of C. necator NSDG-GG, which
this study because the hydrolysate contained a mixture of sugars would explain its low CDW and PHA content. Wild-type C. necator
in an organic buffer solution. Culture media used for bacterial H16 has been proven to grow on hydroxybenzoic acids, which is a
culture are typically sterilized by autoclaving, which is simple and lignin derivative, with PHA accumulation of 65 wt% and 63 wt% on
practical. However, many chemical reactions could occur during 3-hydroxybenzoic acid and 4-hydroxybenzoic acid, respectively.46
thermal processing owing to the complex composition of the However, it did not grow in the presence of other intermediates
hydrolysate. Thus, it is essential to determine the ability of the of hydroxybenzoic acid, such as vanillic acid or syringic acid, which
hydrolysate to withstand autoclaving without undergoing drastic could have been present in the hydrolysate. Therefore, it is possible
changes in its composition as a means of assessing its potential that the poor growth of C. necator NSDG-GG on the hydrolysate
for large-scale application. Sugars are known to be heat-sensitive, was due to low tolerance towards these phenolic compounds.
which was reported in a study as early as the 1930s.37 The enzymes These results highlight the importance of strain selection for the
used for hydrolysis of the pretreated RH were not removed at utilization of biomass-derived feedstocks.
the end of hydrolysis, and remained in the hydrolysate. At pH The marked improvements in CDW of B. cepacia USM when urea
of 7.0, the breakdown of the enzymes into amino acids during was used instead of NH4 Cl were in agreement with previous stud-
the sterilization process provide substrates for Maillard reaction ies, which reported increased growth and PHA accumulation when
to occur, resulting in the loss of sugars. Further reactions may complex nitrogen sources were used.47 Furthermore, the ability of
take place and give rise to formation of fermentation inhibitors B. cepacia USM to utilize urea is economically advantageous due
such as furfural and 5-hydroxymethylfurfural (5-HMF).38 Based on to its lower price.48 However, as each mole of urea contributes one
thermal degradation studies by Qi et al., degradation of xylose mole of carbon, the use of urea also increased the amount of car-
at high temperatures occurs more rapidly than glucose.39 Similar bon in the RH hydrolysate, leading to a lower C/N ratio and sub-
to the conversion of glucose to 5-HMF, xylose also undergoes a sequently a lower PHA content in the cells compared with when
dehydration reaction to form furfural. However, this occurs without NH4 Cl was used.
the need for the formation of an intermediate product, unlike Improvements in CDW and PHA accumulation when B. cepa-
glucose, which must first be converted to fructose before 5-HMF cia USM was cultivated in a fermentor could be attributed to
can be formed. The increase of total phenolics in the hydrolysate the provision of more controlled conditions. In addition, the
after autoclaving at pH 7.0 (Table 2) provided further evidence that hydrolysate was able to sustain growth of the cells up to 48 h,
inhibitory compounds were formed. despite the depletion of sugars by 24 h (Fig. 4(a)). As mentioned
The formation of other monosaccharides upon heating could earlier, this could be owing to the presence of additional nitroge-
be related to the degradation processes. Isomerization of glucose nous compounds, which could help to promote growth. These
to fructose occurs naturally by the action of glucose isomerase. results imply that the additional non-sugar components present in
Generally, this reaction involves a proton transfer that is mediated the RH hydrolysate provide an enriched environment to support
by a base, followed by an acid-catalyzed hydrogen shift.40 There- cell growth and at the same time induce sufficient accumulation
fore, a system that contains both a Lewis acid and Brønsted base of PHA.
enables this reaction to occur.41 One possibility is that the citrate Burkholderia strains have been known to utilize compounds that
salts present in the buffer solution had acted either as a Lewis acid are typically considered toxic, such as polychlorinated biphenyls
or Brønsted base, thus facilitating isomerization. The formation of and aromatic compounds.49,50 It has been reported that Burkholde-
mannose could be attributed to an epimerization reaction, as man- ria cepacia ATCC 17759 could tolerate and catabolize low con-
nose is an epimer of glucose. Previously, the epimerization of glu- centrations of certain inhibitory compounds present in biomass
cose to mannose has been reported using metal ion complexes hydrolysates.51 Based on the results in this study, it was postulated
or molybdate catalysts.42,43 However, in this study, no loss of sug- that B. cepacia USM could also possess similar metabolic pathways
ars was observed in the hydrolysate when it was heat-sterilized at that enable it to not only survive in the presence of inhibitory
pH 4.8, and no significant increase in total phenolics were detected compounds, but also utilize them for cellular activities. This study
(Table 2). The prevention of Maillard reaction by lowering the represents a significant effort in managing agricultural waste by
pH of the reaction system has also been reported in previous channeling RH into processes for obtaining PHA, a value-added
studies.44,45 product. As a multi-step process, conversion of a biomass such
The use of crude sugars obtained from hydrolysis or extraction as RH involves input of energy and chemicals at each step, which
of plant biomass may be beneficial for the purpose of microbial could increase the overall production costs at industrial level. To
cultivation. The unrefined and unpurified sugar solutions often make such a process economically feasible, improvements from
contain additional compounds, such as organic acids or nitroge- many aspects need to be considered. Nevertheless, with the con-
nous compounds, which could enhance growth of the bacteria tinuous emergence of new biotechnological tools, the develop-
and improve biosynthesis yields. Although the presence of these ment of cost-efficient biorefineries may be possible in the near
chemical components could potentially inhibit bacterial growth, future.

J Chem Technol Biotechnol (2016) © 2016 Society of Chemical Industry wileyonlinelibrary.com/jctb


www.soci.org K-S Heng et al.

ACKNOWLEDGEMENTS 22 Yu J, Zhang J, He J, Liu Z and Yu Z, Combinations of mild physical or


chemical pretreatment with biological pretreatment for enzymatic
The authors thank the Swedish Research Council (Swedish hydrolysis of rice hull. Bioresource Technol 100:903–908 (2009).
Research Links grant, 348-2012-6169) for supporting this work. 23 de Jong E and Gosselink RJA, Lignocellulose-based chemical products,
HKS thanks the Malaysian Ministry of Higher Education for pro- in Bioenergy Research: Advances and Applications, ed by Gupta VK,
viding financial support through the MyBrain15 scholarship Kubicek CP, Saddler J, Xu F and Tuohy MG. Elsevier, Oxford, 277–314
programme. (2014).
24 Ong LGA, Chuah C and Chew AL, Comparison of sodium hydroxide
and potassium hydroxide followed by heat treatment on rice straw
Supporting Information for cellulase production under solid state fermentation. J Appl Sci
Supporting information may be found in the online version of this 10:2608–2612 (2010).
article. 25 Remli NAM, Shah UKM, Mohamad R and Abd-Aziz S, Effects of chemical
and thermal pretreatments on the enzymatic saccharification of rice
straw for sugars production. BioResources 9:510–522 (2014).
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