Duong 2015

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ORIGINAL RESEARCH

published: 19 May 2015


doi: 10.3389/fpls.2015.00359

Growth and lipid accumulation of


microalgae from fluctuating brackish
and sea water locations in South
East Queensland—Australia
Van Thang Duong, Skye R. Thomas-Hall and Peer M. Schenk *

Algae Biotechnology Laboratory, School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD,
Australia

One challenge constraining the use of microalgae in the food and biofuels industry is
growth and lipid accumulation. Microalgae with high growth characteristics are more
likely to originate from the local environment. However, to be commercially effective, in
Edited by:
Flavia Vischi Winck, addition to high growth microalgae must also have high lipid productivities and contain
Brazilian Center for Research in the desired fatty acids for their intended use. We isolated microalgae from intertidal
Energy and Materials, Brazil
locations in South East Queensland, Australia with adverse or fluctuating conditions,
Reviewed by:
Bettina Scholz,
as these may harbor more opportunistic strains with high lipid accumulation potential.
BioPol ehf./University of Akureyri, Screening was based on a standard protocol using growth rate and lipid accumulation as
Iceland
well as prioritizing fatty acid profiles suitable for biodiesel or nutraceuticals. Using these
Klervi Le Lann,
Université de Bretagne Occidentale, criteria, an initial selection of over 50 local microalgae strains from brackish and sea water
France was reduced to 16 strains considered suitable for further investigation. Among these
*Correspondence: 16 strains, the ones most likely to be effective for biodiesel feedstock were Nitzschia
Peer M. Schenk,
Algae Biotechnology Laboratory,
sp. CP3a, Tetraselmis sp. M8, Cymbella sp. CP2b, and Cylindrotheca closterium SI1c,
School of Agriculture and Food reaching growth rates of up to 0.53 day−1 and lipid productivities of 5.62 µg mL−1 day−1 .
Sciences, University of Queensland,
Omega-3 fatty acids were found in some strains such as Nitzschia sp. CP2a, Nitzschia
Level 5, John Hines Building,
Brisbane, QLD 4072, Australia sp. CP3a and Cylindrotheca closterium SI1c. These strains have potential for further
p.schenk@uq.edu.au research as commercial food supplements.

Specialty section: Keywords: biodiesel, diatom, fatty acids, microalgae, omega-3 fatty acids
This article was submitted to
Plant Biotechnology,
a section of the journal Introduction
Frontiers in Plant Science

Received: 23 March 2015 Microalgae grow in most natural environments, typically aquatic and marine systems, but they
Accepted: 05 May 2015 are also found in soil, ice, rock pools or in volcanic water that can have extreme environmental
Published: 19 May 2015 fluctuations (Duong et al., 2012). Microalgae suffering from adverse or fluctuating conditions often
Citation: have the ability to accumulate higher contents of biochemical products for survival, such as lipid,
Duong VT, Thomas-Hall SR and starch, protein or carotenoid contents (Lim et al., 2012). Microalgae can produce a variety of lipids
Schenk PM (2015) Growth and lipid that can be used by the food and biofuel industry (Huerlimann et al., 2010). For the production
accumulation of microalgae from
of biodiesel, fatty acids with a chain length of 14–18 carbons are preferable. Saturated fatty acids
fluctuating brackish and sea water
locations in South East
C14, C16, and C18 and unsaturated fatty acids such as C16:1, C16:2, C18:1, and C18:2 are the most
Queensland—Australia. important for producing good biodiesel quality (Schenk et al., 2008). This is because the other
Front. Plant Sci. 6:359. unsaturated fatty acids with 3 or 4 double bonds have reduced stability in storage (Knothe, 2006;
doi: 10.3389/fpls.2015.00359 Chisti, 2007).

Frontiers in Plant Science | www.frontiersin.org 1 May 2015 | Volume 6 | Article 359


Duong et al. Characterization of Australian coastal microalgae

The components of fatty acids, including saturated and different environments to provide a diverse taxonomy, stored in
unsaturated fatty acids produced by microalgae, differ for a cold box and transferred to the laboratory for analysis.
different species and strains (Renaud et al., 1994; Salama et al.,
2013). The accumulation of fatty acid components can be Isolation and Preliminary Screening
controlled by environmental conditions such as temperature, Microalgae were cultured in f/2 medium at 25 ± 1◦ C with a
nutrient availability and salinity (Renaud et al., 2002; Huerlimann 12/12 h light/dark photoperiod at a light intensity of 120 µmol
et al., 2010). Alternatively, the necessary fatty acids can be photons m−2 s−1 from fluorescent lights (Osram L36W/840)
developed using a chemical process. For example, unsaturated and constant bubbling conditions (LP-100 air pump, Shen-Zhen
fatty acids from microalgae, especially fatty acids with 3 or 4 Xingrisheng Industrial Co. Ltd) in a temperature-controlled
double-bonds, can be easily hydrogenated under partial catalysts environment room. Single cells were isolated by a micropipette
(Jang et al., 2005), but it is preferable to identify and propagate on an inverted microscope and grown in 96 wells plates before
microalgae that do not require secondary treatment to modify transferring to 100 mL flasks for pure cultivation as described
their fatty acid profile. Growth temperature is a major factor previously (Duong et al., 2012). The isolation procedure was
that dramatically influences lipid accumulation in general or conducted with sterilized equipment and in the laminar flow.
lipid composition in particular. For instance, a higher growth Single cells were isolated by the micromanipulation method
temperature can stimulate lipid accumulation in microalgae or and the pure culture was checked regularly for the presence
a lower growth temperature can lead to increased saturated fatty of contaminating algae or high abundance of bacteria during
acid composition (Renaud et al., 2002). inoculation and growth experiments. It should be mentioned that
The screening of microalgae is not limited to those suitable the cultures in this study are not axenic. While it can be excluded
for biodiesel production, because microalgae also offer multiple that they contain other microalgae or protists, they still contain
bio-products that can be used in a variety of industry (Schenk associated bacteria. This was considered desirable as microalgae-
et al., 2008; Huerlimann et al., 2010). For instance, unsaturated associated bacteria often provide improved growth (Amin et al.,
fatty acids containing more than three double bonds, including 2012). Algal strains were then provisionally screened based on
omega-3 fatty acids, are not preferable for biodiesel but they their ability for rapid growth and lipid fluorescence using Nile
can be useful as nutritious food or feed supplement. These red staining as described by Lim et al. (2012).
compounds currently have a high value and could compete with
fish oil in terms of productivity and environmental sustainability Classification by DNA Sequencing
(Adarme-Vega et al., 2014). Microalgal biomass was collected at the late exponential phase of
Although microalgae are known to produce considerable cultivation for DNA extraction. DNA extraction was performed
amounts of lipids this it is not true for all microalgal strains. using a phenol:chloroform method. After extraction, genomic
The purpose of our research was to screen microalgal isolates DNA within the 18S rRNA region was amplified on a PCR
collected from brackish and sea water and identify those with machine by using the following primers: Forward 5 -GCGGTA
the highest growth and lipid production with desirable fatty acid ATTCCAGCTCCAATAGC-3 and Reverse 5 -GACCATACT
composition. As lipid accumulation capacity of algae changes CCCCCCGGAACC-3 . The process followed was developed
when subjected to adverse external factors, such as nutrient by Lim et al. (2012). PCR templates were then purified by
supply and environmental conditions (Huerlimann et al., 2010; using a Wizard SV Gel PCR Clean-Up System (Promega). For
Chen et al., 2011), the research focused on microalgae from sites sequencing preparation, 5 µL of a 25 ng µL−1 PCR product were
that have known adverse or fluctuating environmental conditions combined with 1 µL of a 10 µM solution of each of the above
(e.g., intertidal rock pools; Underwood, 1984). After isolating primers. The reaction was topped up to 12 µL with Millipore
pure algal cultures, growth and lipid production were compared water in a 1.5 mL tube and sent to the Australian Genome
to establish which strains are most stable and productive and Research Facility (AGRF) at The University of Queensland for
most likely to be effective as a feedstock source for biofuel sequencing and analysis. The DNA sequence data was compared
production. In addition, strains which produce fatty acids with Genbank entries for classification.
suitable for the health food industry were identified.
Standard Protocol for Growth Experiments
Materials and Methods After obtaining pure cultures, all isolated strains were grown in
f/2 medium following a cultivation protocol that used bubbling
Microalgae samples were collected from a variety of sites in for aeration and mixing. The standard protocol can be briefly
the lower reaches of the Brisbane River, Stradbroke Island, described as follows: All strains were inoculated with 5 mL from
and Sunshine Coast in South East Queensland—Australia. The a recently grown master culture and cultured in 150 mL f/2
samples represent different environmental conditions of tidal medium until the end of the exponential growth phase was
brackish river water (50 cm depth), rock pools and beaches. Two reached (less than 10% cell density increase/day) before starting
species from the Australian National Algae Culture Collection the standard growth experiment. This culture was then used
from the Commonwealth Scientific and Industrial Research as the inoculum at a ratio of 1/10 for 300 mL f/2 medium in
Organisation (CSIRO) were used to compare growth and lipid 400 mL bottles that were connected to a bubbling system and
production with the strains that were isolated from the field exposed to 12/12 h light/dark photoperiod at a light intensity
(Table 1). The microalgae were intentionally gathered from of 120 µmol photons m−2 s−1 . Cells were counted daily by

Frontiers in Plant Science | www.frontiersin.org 2 May 2015 | Volume 6 | Article 359


Duong et al. Characterization of Australian coastal microalgae

TABLE 1 | Sources and accessions of microalgae used in this study.

Species GPScoordinates Species origin and collection time Site status Genbank accession
number

Achnanthes sp. BR22.5_3 27◦ 29 29.00S153◦ 00 48.00E Brisbane River (11.40 am 22/05/2012) Brackish water KF 360813
Bacillariophyta sp. B3 26◦ 48 12.11S153◦ 08 50.86E Bullcock Beach (3 pm 12/06/2011) Tidal rock pool KF 360815
Bacillariophyta sp. SI1a 27◦ 26 14.23S153◦ 30 51.08E Stradbroke Island (3 pm 07/07/2011) Brackish rook pool KF 360816
Chlorella sp. BR2 – Brisbane River Lim et al., 2012 Brackish water –
Cylindrotheca closterium SI1c 27◦ 26 14.23S153◦ 30 51.08E Stradbroke Island (3 pm 07/07/2011) Brackish rock pool KF 360818
Cymbella cistuliformis CP2c 24◦ 59 19.96S153◦ 21 04.74E Frazer Island, Champagne Pools (10 am 1/4/2012) Tidal rock pool KF 360819
Cymbella sp. CP2b 24◦ 59 19.96S153◦ 21 04.74E Frazer Island, Champagne Pools (10 am 1/4/2012) Tidal rock pool KF 360820
Dunaliella tertiolecta – CSIRO Tasmania (CS-175/8) – –
Navicula sp. BR22.52 27◦ 29 29.00S153◦ 00 48.00E Brisbane River (11.40 am 22/05/2012) Brackish water KF 360822
Navicula sp. CP6a 24◦ 59 19.96S153◦ 21 04.74E Frazer Island, Champagne Pools (10 am 1/4/2012) Tidal rock pool KF 360823
Navicula sp. SI2d 27◦ 25 33.82S153◦ 31 45.70E Stradbroke Island (3 pm 07/07/2011) Tidal rock pool KF 360824
Nitzschia sp. CP2a 24◦ 59 19.96S153◦ 21 04.74E Frazer Island, Champagne Pools (10 am 1/4/2012) Tidal rock pool KF 360825
Nitzschia sp. CP3a 24◦ 59 19.96S153◦ 21 04.74E Frazer Island, Champagne Pools (10 am 1/4/2012) Tidal rock pool KF 360826
Phaeodactylum tricornutum – CSIRO Tasmania (CS-29/8) – –
Tetraselmis sp. M8 – Rock Pool Maroochydore, Lim et al., 2012 Tidal rock pool JQ 423158
Thalassiosira rotula SI2a 27◦ 25 33.82S153◦ 31 45.70E Stradbroke Island (3 pm 07/07/2011) Tidal rock pool KF 360828

using a hemocytometer. Nitrate concentrations were monitored (MS). The running conditions were described by Agilent’s RTL
daily until the nutrient levels reached zero (below detection). DBWax method (Brown, 1991).
Nitrate was determined by using a colorimetric assay (API test
kit) and measured on a spectrophotometer at a wavelength Results
545 nm. Growth rates were calculated by the following equation
(Levasseur et al., 1993) Growth of Selected Microalgal Strains
Out of 50 microalgal strains that were isolated, 16 were shortlisted
based on their rapid growth and high lipid fluorescence following
 ln N2
N1 Nile red staining (Figure 1 shows an example). Strains were
K =
t2 − t1 then compared in standard growth and lipid accumulation
assays to determine the most suitable strains as feedstock
where N1 and N2 equal cell counts at time 1 (t1 ) and time 2 (t2 ), for biodiesel and/or nutraceuticals. The growth of microalgal
respectively. Doubling time was also calculated once the specific strains in the collection is presented in two groups for easier
growth rate was known. comparison: diatoms and green microalgae. The fastest growing
strain Thalassiosira rotula SI2a grew 5.3 times faster than the
ln2
Doubling time = slowest growing strain Bacillariophyta sp. B3 (Table 2). Among
K the diatomaceous species, Thalassiosira rotula SI2a’s cell density
Microalgae were cultured for another 3 days after the nitrate was 2.47 × 106 cells mL−1 and this strain exhibited the highest
concentration in the medium became undetectable to induce growth rate and lowest doubling time, achieving 0.64 day−1
lipid biosynthesis. and 1.09 days, respectively. The cell density of Phaeodactylum
tricornutum reached 6.97 × 106 cells mL−1 and grew more after
Fatty Acid Methyl Esters (FAME) Analysis the standard assay’s completion. The growth rate and doubling
Samples for FAME analysis were collected when lipid time of this strain was 0.49 day−1 and 1.42 days, respectively.
accumulation reached its peak, after 3 days of starvation. A Cylindrotheca closterium SI1c’s growth reached a peak of 1.89 ×
total of 4 mL of microalgal culture was collected and centrifuged 106 cells mL−1 . Bacillariophyta sp. SI1a, Bacillariophyta sp. B3,
at 8000 × g for 5 min. Biomass was collected and dried by a and Navicula sp. SI2d grew slowly and reached peaks of 3.18×105
vacuum pump for 30 min. Lipids in the microalgal pellet were cells mL−1 , 4.5 x 104 cells mL−1 and 1.18 × 105 cells mL−1 ,
hydrolyzed and methyl-esterified in 300 µL of a 2% H2 SO4 and respectively.
methanol solution for 2 h at 80◦ C. Prior to the reaction, 50 µg of Dunaliella tertiolecta, Chlorella sp. BR2 and Tetraselmis sp.
heneicosanoic acid (Sigma, USA) was added as internal standard. M8 were the fastest growing green algal strains. Cell density of
After the esterification step, 300 µL of 0.9% (w/v) NaCl solution three strains increased gradually and peaked after 7 to 9 days. The
and 300 µL of hexane were added and mixed for 20 s. To separate cell density peaks for Chlorella sp. BR2, Tetraselmis sp. M8, and
the phase, samples were centrifuged at 16,000 × g for 3 min. A Dunaliella tertiolecta were 2.46 × 106 cells mL−1 , 2.62 × 106 cells
total of 1 µL of hexane layer was injected into an Agilent 6890 gas mL−1 , and 2.67 × 106 cells mL−1 , respectively. These strains had
chromatograph (GC) coupled to a 5975 MSD mass spectrometer similar growth rates and doubling times (Table 2).

Frontiers in Plant Science | www.frontiersin.org 3 May 2015 | Volume 6 | Article 359


Duong et al. Characterization of Australian coastal microalgae

TABLE 2 | Growth characteristics of the isolated strains in f/2 medium


during the duration of the standard assay.

Species Mean growth Doubling Maximum


rate (µ day−1 ) time (days) cell density
(x104 cells mL−1 )

Achnanthes sp. BR22.5_3 0.13 5.48 28.50


Bacillariophyta sp. B3 0.12 5.96 6.17
Bacillariophyta sp. SI1a 0.32 2.16 31.83
Chlorella sp. BR2 0.45 1.54 245.83
Cylindrotheca closterium SI1c 0.53 1.31 189.00
Cymbella cistuliformis CP2c 0.26 2.65 28.67
Cymbella sp. CP2b 0.53 1.31 103.17
Dunaliella tertiolecta 0.46 1.51 266.83
Navicula sp. BR22.52 0.34 2.05 24.50
Navicula sp. CP6a 0.39 1.80 42.33
Navicula sp. SI2d 0.29 2.40 11.83
Nitzschia sp. CP2a 0.22 3.08 298.33
20 µm Nitzschia sp. CP3a 0.17 3.99 123.83
Phaeodactylum tricornutum 0.49 1.42 696.67
FIGURE 1 | Cymbella sp. CP2b after Nile red staining under Tetraselmis sp. M8 0.43 1.60 262.17
fluorescence microscopy. Yellow droplets show lipid containing Thalassiosira rotula SI2a 0.64 1.09 247.00
triacylglycerides and orange droplets show autofluorescence from chlorophyll.
Cymbella sp. CP2b displayed fast growth rates and one of the highest lipid Shown are mean values from three separately-grown cultures each.
productivities (4.51 µg mL−1 day−1 ).
12.46% for Nitzschia sp. CP2a. DHA reached 1.11 and 1.36%
Nitrogen and phosphorous concentrations changed during for Nitzschia sp. CP3a and Nitzschia sp. CP2a, respectively. On
the cultivation of the strains. Nitrate concentration in the average, saturated fatty acids were the major FAMEs in most
medium decreased dramatically from day 3 to day 5 and nitrogen strains; the highest values were found in Thalassiosira rotula SI2a
depletion occurred from day 5 to day 7 of the experiment. (62.18%), Bacillariophyta sp. B3 (71.9%) and Navicula sp. CP6a
The concentration of phosphate decreased gradually over the (71.61%). However, total unsaturated fatty acids were higher than
experimental period. A depletion of phosphate occurred from total saturated fatty acids in strains such as Dunaliella tertiolecta
day 7 to day 10. Nitzschia sp. CP2a and Nitzschia sp. CP3a (62.08%), Cylindrotheca closterium SI1c (61.65%), and Nitzschia
consumed most nutrients among the strains tested (Figure 2). sp. CP3a (60.47%).

Lipid Contents in Microalgae Collection Discussion


The result from GC/MS showed that all selected microalgal
strains can produce fatty acids. Eighteen different fatty acids were All strains in the study were collected from estuary, coastal
detected, however not all strains produced all 18 fatty acids. There waters and rock pools where environmental conditions change
was no detection of some unsaturated fatty acid with 3 or 4 frequently, especially changes of temperature, salinity, light
double bonds such as hexadecatrienoic acid, hexadecatetraenoic exposure, and nutrients. The changes require microalgae to
acid, and stearidonic acid in Nitzschia sp. CP2a, Cymbella sp. adapt and/or produce more biochemical products to ensure
CP2b, Cymbella cistuliformis CP2c, Nitzschia sp. CP3a, and their survival (Lim et al., 2012). Lipid is one of the biochemical
Navicula sp. CP6a. Total FAMEs ranged from 9.27 to 50.53 µg products that microalgae can produce along with starch under
mL−1 . The highest FAME content was achieved for Nitzchia nutrient deprived conditions in the light (Schenk et al., 2008).
sp. CP3a and the lowest was measured for Chlorella sp. BR2 Lipid productivities were highest for Nitzschia sp. CP3a (5.62 µg
(Figure 3). Palmitic acid and stearic acid were dominant among mL−1 day−1 ), Tetraselmis sp. M8 (5.29 µg mL−1 day−1 ),
the total fatty acids. The percentage of palmitic acid ranged from Cymbella sp. CP2b (4.51 µg mL−1 day−1 ), and Cylindrotheca
19.83 to 37.65% in most of the strains, except for Bacillariophyta closterium SI1c (3.93 µg mL−1 day−1 ). The value for Tetraselmis
sp. SI1a, Cylindrotheca closterium SI1c, Thalassiosira rotula SI2a, sp. M8 was higher than the lipid productivity previously reported
and Navicula sp. SI2d. Stearic acid that accumulated in the strains for this strain when grown under laboratory conditions (2.1 µg
ranged from 14.81 to 57.73%, except for Nitzschia sp. CP2a, mL−1 day−1 ; Lim et al., 2012). It is interesting to note that all of
Cymbella sp. CP2b, and Nitzschia sp. CP3a. these strains have been isolated from coastal rock pools subjected
Interestingly, omega-3 eicosapentaenoic acid (EPA) and to tides. Their high lipid productivities suggest that these
docosahexaenoic acid (DHA) were found in most of the strains. microalgae may be more opportunistic than others from more
The highest EPA percentage of total FAMEs reached 30.85% for stable environments (e.g., stationary lakes or open ocean). A
Phaeodactylum tricornotum, 14.49% for Nitzschia sp. CP3a, and future study comparing the growth rates and lipid productivities

Frontiers in Plant Science | www.frontiersin.org 4 May 2015 | Volume 6 | Article 359


Duong et al. Characterization of Australian coastal microalgae

A
500

400

Nitrate (mM)
300

200

100

0
Day 0 Day 1 Day 2 Day 3 Day 4 Day 5 Day 6
Nitzschia sp. CP2a Cymbella sp. CP2b Nitzschia sp. CP3a

B
70
60
50
Phosphate (mM)

40
30
20
10
0
Day 0 Day 1 Day 2 Day 3 Day 4 Day 5 Day 6 Day 7 Day 8 Day 9 Day 10

Nitzschia sp. CP2a Cymbella sp. CP2b Nitzschia sp. CP3a

FIGURE 2 | Nitrate (A) and phosphate (B) depletion in growth medium (daily uptake) of Cymbella sp. CP2b, Nitzschia sp. CP2a, and Nitzschia sp. CP3a.
Shown are mean values ± SEs from three separately-grown cultures each.

a
60
a
50
a a
-1

a
FAM E µ g m L

40
c c c bc c
b bd
30
bd d bd
20 b c
b b
10

0
B a c illa rio p h y ta s p . S I1 a

T h a la s s io s ira ro tu la S I2 a
T e tra s e lm is s p . M 8

D u n alie lla te rtio le c ta


B a c illa rio p h y ta s p . B 3

C h lo re lla s p . B R 2
N itzs c h ia s p . C P 2 a
N itzc h ia s p . C P 3 a

N a v ic u la s p . C P 6 a
N a v ic u la s p . S I2 d

C y lin d ro th e c a c lo s te riu m S I1 c
C y m b e lla c is tu lifo rm is C P 2 c
C y m b e lla s p . C P 2 b

P h a e o d a c ty lu m tric o rn o tu m

FIGURE 3 | Total fatty acid methyl esters (FAMEs) contents of Different letters above bars indicate statistically significant differences
the isolated microalgal strains, expressed in µg mL−1 . Shown (p < 0.05; Two-Way ANOVA, Tukey’s HSD test using GraphPad
are mean values ± SEs from three separately-grown cultures. Prism 6.0).

Frontiers in Plant Science | www.frontiersin.org 5 May 2015 | Volume 6 | Article 359


TABLE 3 | Fatty acid composition in percentage of total fatty acid methyl esters (FAMEs) of different microalgal strains collected in South East Queensland, Australia after cultivation to nitrate
depletion and an additional 3 days of starvation.
Duong et al.

Bacillariophyta
sp. B3
Bacillariophyta
sp. SI1a
Cylindrotheca
closterium
SI1c
Thalassiosira
rotula SI2a
Navicula
sp. SI2d
Tetraselmis
sp. M8
Phaeodactylum
tricornotum
Chlorella
sp. BR2
Dunaliella
tertiolecta
Nitzschia
sp. CP2a
Cymbella
sp. CP2b
Cymbella
cistuliformis
CP2c
Nitzschia
sp. CP3a
Navicula
sp. CP6a

Fatty acids

Lauric (C12:0) 1.12 1.64 1.59 2.17 2.18 0.95 0.13 2.05 0.27 0.00 0.00 0.00 0.00 0.00
Myristic (C14:0) 21.32 0.74 0.63 0.66 0.81 0.93 8.74 1.65 0.47 5.96 9.56 6.73 5.33 4.88
Palmitic (C16:0) 23.64 0.88 0.23 1.27 1.12 28.33 29.31 31.68 19.87 30.10 37.65 30.22 28.82 37.04

Frontiers in Plant Science | www.frontiersin.org


Palmitoleic (C16:1) 0.45 1.43 4.66 1.19 1.37 1.79 0.21 4.71 0.35 31.57 38.26 21.31 27.28 15.75
Hexadecadienoic (C16:2) 5.08 13.72 8.97 3.18 6.56 14.59 0.43 1.42 1.44 2.80 1.60 2.49 3.33 1.63
Hexadecatrienoic (C16:3) 4.80 23.29 23.28 2.32 6.92 18.27 5.59 8.84 4.22 0.00 0.00 0.00 0.00 0.00
Hexadecatetraenoic (C16:4) 0.72 1.85 1.77 0.93 2.06 0.25 0.01 0.04 23.30 0.00 0.00 0.00 0.00 0.00
Stearic (C18:0) 25.15 39.13 35.21 57.73 52.32 19.79 14.81 29.28 16.65 5.71 6.56 20.39 5.25 28.74
Oleic (C18:1) 3.57 5.57 10.11 19.24 18.07 8.08 7.13 11.86 0.82 1.97 1.18 2.37 2.92 2.07
Linoleic (C18:2) 1.48 0.21 0.17 0.09 0.05 0.24 1.76 6.12 1.85 0.80 0.28 1.21 1.33 0.38
Linolenic (C18:3) 5.64 6.90 10.83 9.95 4.23 3.41 0.34 0.39 29.98 1.79 0.09 0.61 1.16 0.26
Stearidonic (C18:4) 0.10 0.15 0.20 0.10 0.15 0.14 0.00 0.13 0.00 0.00 0.00 0.00 0.00 0.00
Arachidic (C20:0) 0.52 0.18 0.42 0.17 0.11 0.26 0.60 1.28 0.57 0.19 0.20 0.77 0.13 0.95

6
Arachidonic (C20:4) 0.12 3.20 0.67 0.04 0.13 1.54 0.00 0.04 0.00 5.28 0.68 4.80 8.85 1.87
Eicosapentaenoic (EPA) (C20:5) 5.71 0.28 0.38 0.21 3.44 0.28 30.85 0.08 0.12 12.46 3.94 8.75 14.49 6.16
Behenic (C22:0) 0.15 0.40 0.27 0.18 0.19 0.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
Docosatetraenoic (C22:4) 0.26 0.25 0.29 0.32 0.18 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00
Docosahexaenoic (DHA)(C22:6) 0.17 0.17 0.34 0.26 0.09 0.36 0.00 0.00 0.01 1.36 0.00 0.34 1.10 0.28
Saturated fatty acids (%) 71.90 42.96 38.35 62.18 56.73 50.60 53.59 65.93 37.82 41.96 53.97 58.11 39.53 71.61
Unsaturated fatty acids (%) 28.10 57.04 61.65 37.82 43.27 49.40 46.31 33.64 62.08 58.04 46.03 41.89 60.47 28.39
Total fatty acids (µg mL−1 ) 28.91 26.91 35.36 24.56 16.41 47.65 22.85 9.27 17.69 38.21 40.58 11.13 50.53 7.90
Lipid productivity (µg mL−1 day−1 ) 3.21 2.99 3.93 2.73 1.82 5.29 2.54 1.03 1.97 4.25 4.51 1.24 5.62 0.88

Shown are mean values from three separately-grown cultures each.

May 2015 | Volume 6 | Article 359


Characterization of Australian coastal microalgae
Duong et al. Characterization of Australian coastal microalgae

of microalgae isolated from stable and unstable environments comparison of growth rates among the fastest growth strains
may further substantiate this notion. High growth rates of these between the study and other publications has been undertaken.
microalgae lead to rapid production of biomass while their high It showed that the growth of the strains in the present study
lipid accumulation capability is likely to assist in higher survival was similar or faster to those in other studies for Chlorella sp.
rates during adverse conditions. Interestingly, divergent from BR2, Tetraselmis sp. M8 (24.5 and 18.6% increase, respectively,
this trend is Nitzschia sp. CP3a which despite its high lipid compared to the study by Lim et al., 2012) or slightly lower for
productivity had a very slow growth rate. Further studies should Thalassiosira rotula (23.4% reduction compared to the study by
be conducted to test the survival rates of these strains and if these Doan et al., 2011). The difference may be due to a difference
correlate with their cellular lipid and/or starch contents. of strains used and growth conditions, such as air and nutrient
Diatoms can survive in harsh environments (Seckbach, 2007) supply, temperature, culture systems and photosynthesis periods
and usually produce more lipids in harsher environments (Lim (Renaud et al., 2002; Converti et al., 2009).
et al., 2012). For this research, the difference of environmental Total FAMEs results from GC/MS analysis showed that all 14
conditions between natural habitats and the laboratory may microalgal strains tested were lipid producers under the standard
have created a harsh environment that impacted on growth and conditions used (Table 3). Nitzschia sp. CP3a was the highest
chemical accumulation of microalgae tested. Many of the strains lipid producer, followed by Tetraselmis sp. M8, Cymbella sp.
in this study adapted to their new environment and grew well CP2b, Nitzschia sp. CP2a and Cylindrotheca closterium SI1c. The
under laboratory conditions. For instance, Cymbella sp. is a lipid content produced by Tetraselmis sp. M8 was similar to the
diatom that usually requires multi nutrients and minerals from results of Lim et al. (2012). The proportion of saturated fatty
natural sources (Tarapchak et al., 1983; Takeda, 1998). However, acids reached more than 50% for most of the diatom strains
this strain grew well in f/2 medium and displayed one of the best and was dominated by myristic acid, palmitic acid, and stearic
growth rates (Table 2). The indoor growth experiments were set acid. These fatty acids are the main desirable components for
up for conditions similar to the natural habitats (temperature, biodiesel production (Schenk et al., 2008). Based on the above
nutrients, light). However, the indoor conditions are not identical properties, we conclude that the two diatoms, Cymbella sp. CP2b
to the natural conditions and the adaptability of the selected and Cylindrotheca closterium SI1c, are potential strains that can
microalgae to the laboratory condition is a useful indicator be used to develop microalgal biofuel production.
of microalgae’s ability to adapt to different external conditions
which also will be encountered when grown at large scale for Author Contributions
commercial purposes.
In addition, nutrient availability also affects diatom growth. All authors designed the work, wrote the manuscript and approve
For example, silica is the main components of the diatom the final version of the manuscript. VD acquired the material.
cell wall. Changing nutrient availability may directly influence VD, ST carried out the experiments, analyzed and interpreted the
the structure of silica composition in the cell wall and affect data. ST, PS critically revised the work and the manuscript.
diatom growth (Tarapchak et al., 1983). Thus optimizing nutrient
availability can also substantially affect growth rates and biomass Acknowledgments
production. For example, increasing of nutrients or nitrogen
leads to an increase of growth rate (Converti et al., 2009; Chen We are grateful to Meat & Livestock Australia, the Australian
et al., 2011; Borowitzka and Moheimani, 2013). However, to Research Council, The University of Queensland and the
enable a direct side-by-side comparison, a standard assay with Endeavour scholarship program of the Australian Government
unoptimized parameters was used in the current study. Clearly, for financial support. We wish to thank Dorothee Hahne from
higher growth rates and lipid productivities are achievable Metabolomics Australia for technical assistance and Prof Dennis
after careful cultivation optimization. For example, this has Poppi, Dr Stuart McLennan, Dr Simon Quigley, Dr Faruq Ahmed
been achieved for Tetraselmis sp. M8 (Sharma et al., 2014). A and Paul Rodman for useful discussions.

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