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Lec 1 Enzymes
Lec 1 Enzymes
Lec 1 Enzymes
LEC 1: ENZYMES
MS. MARTINA DEANNE C. MENDOZA, RMT
2023 - 2024
X. Lactescense or milky specimen - decreases enzyme • The catalytic activity of an enzyme molecule depends generally
concentration on the integrity of its structure.
Enzyme Nomenclature • When all sites are filled, no further binding can occur until an
active site discharges its contents.
• Enzymes are classified according to their biochemical functions,
indicating substrate and class of reaction catalyzed, and are • When bound tightly to the enzyme, the coenzyme is called a
designated by individual identification numbers. prosthetic group.
• The first digit places the enzyme in its classifications (six • Apoenzyme (enzyme portion) and coenzyme forms a complete
classifications). and active system known as holoenzyme (apoenzyme +
prosthetic group = holoenzyme).
• The second and third digits, represents the subclass to which
the enzyme is assigned. • Prosthetic group is an organic cofactor tightly bound to the
enzyme.
• The final and fourth number/s is a serial number that is specific
to each enzyme in a subclass. • Digestive enzymes in its inactive form originally secreted from
the organ of production is called a proenzyme or zymogen.
Classifications of Enzymes
Enzyme Theory
Oxidoreductases catalyze an oxidation-reduction reaction
between two substrates Emil Fisher’s / Lock and Key Theory
Transferases catalyze the transfer of a group other than
hydrogen from one substrate to another. • A German scientist, Emil Fischer postulated the lock and key
Hydrolases catalyze hydrolysis of various bonds. model in 1894 to explain the enzyme’s mode of action.
Lyases catalyze removal of groups from substrates without
hydrolysis; the product contains double bonds. • It is based on the premise that the shape of the key (substrate)
Isomerases catalyze the interconversion of geometric, must fit into the lock (enzyme).
optical, or positional isomers.
Ligases catalyze the joining of two substrate molecules, • There is no change in the shape of the active site when the
coupled with breaking of the pyrophosphate bond in substrate binds.
adenosine triphosphate (ATP) or a similar compound.
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Enzymatic Activity
- enzymes are measured in terms of:
Change in the substrate concentration
Change in the product concentration
Change in coenzyme concentration
Units for Expressing Enzymatic Activity • In healthy sera, ALP levels are derived from liver (hepatic
sinusoid and canalicular surface) and bone (osteoblasts).
1. International Unit (IU or U) – 1 micromole of
substrate/minute • It is normally elevated (bone isoenzyme) in children during
periods of growth and in adults older than age 50 years
2. Katal Unit (KU) – 1 mole of substrate/second (geriatric).
• Enzymes are quantified based on their activity rather than • During period of growth and muscle development, serum ALP
absolute values. and creatine levels increase.
• The units used to report enzyme levels are activity units. • In normal pregnancy, increased ALP activity can be detected
between 16 and 20 weeks of pregnancy.
• The definition for activity unit must consider change in pH,
temperature, substrate, etc.
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• In blood groups O and B, intestinal ALP is increased after • CSF levels of PLAP are of diagnostic value in differentiating
consumption of a fatty meal. ALP is also higher than in whether tumor in the pineal body is pinealoma or a germ cell
individuals of groups A and AB. tumor.
• Placental ALP is lower in pregnant women of blood groups A
and AB.
Methods
• When total ALP activity is elevated, mostly it is contributed by
the liver isoenzyme. • ALP is inactivated by EDTA; hence, serum is the preferred
sample.
Carcinoplacental ALP • ALP requires magnesium ions for activation.
• ALP is increases in obstructive jaundice due to greater rate of Chemical Inhibition Test
secretion. • This method uses different concentrations of phenylalanine,
synthetic urea, and levamisole solutions.
• When there is obstruction in the flow of conjugated bilirubin • Inhibited by Phenylalanine: Placental, Intestinal, and Regan
into the canaliculus, it is accompanied by elevated plasma B2, • Inhibited by 3M urea: Bone ALP
ALP, and gamma-glutamyltransferase (GGT). • Inhibited by Levamisole: Liver and Bone ALP
• For bone disorders, highest elevation occurs in Paget’s disease Bowers and Mc Comb (Szasz Modification)
(osteitis deformans). • Reference method; most specific; routine method
• Substrate: p-nitro phenyl phosphate (PNPP)
• B1x isoform is used to study low bone mineral disease (BMD) • Same substrate with Bessy, Lowry & Brock
in patients with chronic kidney disease.
• Bone ALP isoform known as B1x is detected in the serum of Notes to Remember!
dialysis patients.
• Zinc is a component of ALP, and magnesium is the enzyme
• B1x isoform is used to study low bone mineral disease (BMD) activator.
in patients with chronic kidney disease.
• Hemolysis and diet (fatty meals) are sources of analytic errors
• Serum ALP is elevated in cases of abortion and may be and may cause elevated serum ALP.
increased when there is difficulty in pregnancy and birthing.
• ALP is sensitive if stored at low temperature (4°C), leads to
• Transient low serum ALP may occur after blood transfusion or increased serum level.
cardiopulmonary bypass.
• Decreased ALP is seen in zinc deficiency.
• Prolonged low levels of ALP occur in hypophosphatasia
(defective bone and teeth mineralization). Increased ALP
Obstructive jaundice Osteoblastic bone tumors
ALP as a Tumor Marker Osteitis deformans (osteosarcoma)
Osteomalacia Sprue
• Placental alkaline phosphatase (PLAP) is utilized as a tumor Rickets Hyperparathyroidism
marker in serum and cerebrospinal fluid (CSF) for most germ cell Hepatitis and cirrhosis
tumors. (slight increased)
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Acid phosphatase (ACP) • Tartrate-resistant acid phosphatase (TRAP/TRACP) is present
in some forms of cancer such as chronic leukemia, lymphomas,
• It is active at pH 5.0. and hairy cell leukemia.
• The major isoenzymes are coded for by different genes, with • TRACP-5a is found in Gaucher cells, or in the leukocytes of
varied molecular weights, structures, and inhibition properties. patients with hairy cell leukemia.
• Tissue sources: Prostate (major source), RBCs, platelets, liver, • Reference method: Roy and Hillman
and bone
• Substrate: Thymolphthalein Monophosphate
• Prostatic and bone ACPs are the clinically significant
isoenzymes.
• Reference range:
Based on the differences at the structural level of the gene, ACP • Total ACP is measured by its ability to cleave groups at an
can be divided into 5 isoenzymes: acidic pH.
Prostatic ACP AcPP, human chromosomal location 3q21- • Serum sample must be free from hemolysis.
q23
Erythrocytic ACP AcP1, human chromosomal location 2p25 • Icteric serum causes falsely decreased TRAP activity, but not
Lysosomal ACP AcP2, human chromosomal location 11p12- for total ACP.
p11
Testicular ACP AcPT, human chromosomal location 19q13 • Thymolphthalein monophosphate is the specific substrate and
Macrophagic AcP5, human chromosomal location choice for quantitative endpoint reaction.
ACP 19p13.3-p13.1
• α-naphthyl phosphate substrate is preferred for continuous
Diagnostic Significance monitoring methods.
• The major cause of elevated plasma ACP is prostatic disease. • If not assayed immediately, serum should be frozen or acidified
to a pH lower than 6.5.
• ACP is measure in the detection of prostatic adenocarcinoma.
• With acidification, ACP is stable for 2 days at room temperature.
• ACP assay aids in the detection of metastatic prostatic cancer,
yet total ACP is not a sensitive marker, and prostate specific • Serum ACP decreases within 1 to 2 hours if left at room
antigen (PSA) is a more useful screening and diagnostic tools. temperature.
• ACP is also useful in the forensic chemistry, in the investigation • Prostatic ACP is inhibited by 20=mM L-tartrate ions while 1-
of rape cases – vaginal washings are examined for seminal fluid- mM cupric sulfate and 2% formaldehyde ions inhibit red cell ACP.
ACP activity, which can persist for up to 4 days.
Increased ACP (w/ Metastatic Bone Involvement)
• ACP activity > 50 IU/L indicates the presence of seminal fluid in Prostatic carcinoma Gaucher’s disease
the sample, in the case of forensic investigation. Breast, lung, and thyroid Niemann-pick disease
carcinoma
• TRAP-5b is a marker for bone remodeling and for bone mineral
disease in patients with chronic kidney disease. Aspartate Aminotransferase (AST)
• TRAP-5b is associated with bone resorption while the bone ALP • Previously known as serum glutamic oxaloacetic transaminase
isoforms (B/I, B1, and B2) are related with deposition. (SGOT).
• TRAP-5b is considered to be a marker of the osteoclasts. • It is involved in the transfer of an amino group between
aspartate and α-keto acids with the formation of oxaloacetate
• Increased ACP is observed in thrombocytopenia. and glutamate.
ACP as a Tumor Marker • Isoenzyme fraction: Cytoplasmic AST (ASTc) and Mitochondrial
AST (ASTm)
• Prostatic acid phosphatase (PAP) is used together with prostate
specific antigen (PSA) to monitor recurrence of prostate cancer. • Major tissue source: Cardiac tissue, liver, and skeletal muscle
• PSA is more sensitive than PAP in detecting stages A and B • Other sources: Kidney, pancreas, and RBC
prostatic cancer.
• ASTc is the abundant fraction in healthy serum.
• After surgical treatment of prostate cancer, ACP levels fall
faster than PSA, and plasma levels are expected to be • In case of tissue necrosis, ASTm is the predominant isoenzyme.
undetectable following complete removal of tumor.
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• AST and LD have higher activity in the liver than ALT, but both • Other sources: Kidney, pancreas, heart, skeletal muscles, lungs,
are non-specific enzymes. and RBCs
• AST and LD have equal concentrations in the hepatocytes. • Reference range: 6 – 37 U/L
• The kidney has higher AST activity compared to ALT and LD. Diagnostic Significance
• It is vital in the evaluation of myocardial infarction, • Higher elevations are found in hepatocellular disease more
hepatocellular disorders, and skeletal muscle involvement. than the extra-hepatic and intra-hepatic disorders.
• In acute myocardial infarction (AMI), AST levels begin to rise at • ALT is slightly increased in obstructive jaundice but markedly
6 – 8 hours, peak at 24 hours, and normalize within 5 days. increased in necrotic jaundice.
• AST is used for monitoring therapy with potentially hepatotoxic • The highest elevation of transferase is seen in acute hepatitis.
drugs; a result more than 3x the upper border of normal should
signal cessation of therapy. • It monitors the course of liver treatment and the effects of drug
therapy.
• AST is slight to moderately increased in muscular dystrophy or
disorders compared to ALT which has minimal elevation or even • ALT levels are used to screen blood donors.
normal.
• ALT measurement is a more sensitive and specific screening
Methods test for post-transfusion hepatitis or occupational toxic exposure
compared to AST.
Colorimetric method: Karmen Method
Methods
• It uses malate dehydrogenase (MD) and monitors the change in
the absorbance oat 340 nm continuously as NADH is oxidized to • Both ALT and AST require pyridoxal phosphate, an essential
NAD+ . cofactor that should always be added in any measurement.
• Use of heparin may inhibit the activity of AST. • Absence of pyridoxal phosphate (vitamin B6) will result to
diminished activity of both transferases.
• AST activity is stable in serum for 3 to 4 days at refrigerated
temperature. • The use of icteric and lipemic samples may cause a significant
interference.
• Hemolysis should be avoided because it increases AST 10x the
upper reference limit. • Use of hemolyzed sample cause false increase of AST activity
while a slight elevation or none at all may be observed in ALT.
• Interferences: Hemolyzed and icteric samples (false increased)
and presence of heavy metals (false decreased) Coupled Enzymatic Reaction
• This reaction takes place at pH 7.5 and monitors the change in
the absorbance at 34 nm continuously as NADH is oxidized to
NAD+ .
• Using hemolyzed sample may cause slight elevations in ALT
activity.
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• High serum levels of ALT and AST occur most commonly in Increased Serum Amylase
acute hepatitis and/or mechanical damage to the liver. Acute pancreatitis Alcoholism
Ectopic pregnancy Mumps
• Severe viral or toxic hepatitis may produce elevations of Peptic ulcers
transferee up to 20x the normal limits.
Macroamylasemia
• Moderate elevation of transferases is observed in chronic
hepatitis, hepatic cancer, and infectious mononucleosis. • It is characterized by elevated macroamylase in serum.
• Slightly increased in hepatic cirrhosis, alcoholic hepatitis, and • It is an acquired benign condition, more frequent in men and
obstructive jaundice. usually discovered incidentally in the fifth through seventh
decades.
• The De Ritis ratio (ALT:AST) in acute hepatitis is > 1.0, whereas
in alcohol-induced hepatic injury, the AST:ALT ratio is 3:1. • Macroamylase is a combination of an amylase attached to a
protein (either IgG or IgA); this enzyme-protein complex cannot
• The De Ritis ratio reflects the time course of acute viral be excreted in the urine due to its “macro” size, hence, it remains
hepatitis and is generally a vital clue to the patient’s prognosis. in the blood circulation.
• Severe viral or toxic hepatitis, De Ritis ratio (AST:ALT) is < 1.0. • Clinical findings: Persistent increased serum amylase w/o
symptoms; serum lipase is normal
Amylase / Alpha-1-4Glucohydrolase
Methods
• It catalyzes the breakdown of starch and glycogen.
• Samples with high activity of AMS should be diluted with NaCl
• It is an important enzyme in the physiologic digestion of starch. to prevent inactivation.
• It is the smallest enzyme in size; thus, it is filtered by the renal • The administration of morphine and other opiates for pain
glomeruli and normally appears in the urine. relief before blood sampling will lead to falsely elevated serum
AMS levels.
• It is the earliest pancreatic marker.
• Samples with citrate, oxalate, and heparin should be avoided as
• The major isoenzymes are both present in normal, healthy sera. it can inhibit AMS.
• Major isoenzymes: S-type (ptyalin) and P-type (amylopsin) • Amylase is stable in serum and urine specimens for 7 days at
room temperature.
• Isoforms of salivary amylase: S1, S2, and S3
• Specimen precaution: Avoid contamination with saliva (false
• Isoforms of pancreatic amylase: P1, P2, and P3 (predominant increase of serum AMS)
isoform in acute pancreatitis)
• Substrate: Starch
• Major sources: Acinar cells of the pancreas and the salivary
glands Saccharogenic
• It is the classic reference method expressed in Somogy unit
• Other sources: Fallopian tubes, small intestine, skeletal muscles, (SU).
and adipose tissue • It measures the amount of reducing sugars produced by the
hydrolysis of starch by the usual glucose methods. Amyloclastic
• Reference value: 60 – 80 Somogyi unit (SU)/dL or 95 – 290 • It measures amylase activity by following the decreases in
U/L substrate concentration (degradation of starch).
• In acute pancreatitis (AP), AMS levels rise 2-12 hours after Coupled-enzyme
onset of attack, peak at 24 hours, and normalize within 3-5 days. • It quantifies amylase activity by a continuous-monitoring
technique.
• Increased AMS blood levels are accompanied by increased
urinary excretion.
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Lipase / Triacylglycerol Acylhydrolase Other Methods
• It is an enzyme that hydrolyzes the ester linkages of fats to Tietz and Fiereck
produce alcohol and fatty acid. • Substrate: Olive oil (Triglyceride)
• pH of the buffer: 8.0
• It catalyzes partial hydrolysis of dietary TAG in the intestine to • Incubation: 3 hours
the 2- monoglyceride intermediate, with the production of long • End product: Fatty acid
chain fatty acids.
Peroxidase coupling
• It is the most specific pancreatic marker. • Its primary and • It is currently the most commonly used method.
major source is the pancreas and is not affected by renal • Substrate: Triolein (pure form of TAG)
disorders. • End product: Fatty acid
• Other sources: Stomach, liver, intestine, adipose tissue, breast • It is a hydrogen-transfer enzyme that uses the coenzyme
milk, and WBCs nicotinamide dinucleotide (NAD).
• Reference range: 0 – 1.0 U/mL • It is a tetrameric molecule containing four subunits of two
possible forms (H and M).
Diagnostic Significance
• It is present in almost all cells in the body.
• In AP, LPS levels rise 6 hours after onset of attack, peak at 24
hours, remains elevated for 7 days, and normalize in 8-14 days. • In plasma, the majority of LD activity originates from the
breakdown of erythrocytes and platelets, with varying
• Serum LPS may be elevated for 2 weeks. contributions from other organ sources.
• Persistent and prolonged elevations of serum lipase more than • The heart and red blood cells are the predominant sources of
2 weeks may indicate the presence of pancreatic cyst. LD.
• In chronic pancreatitis, acinar cell degradation occurs, resulting • Tissue sources: Heart, erythrocytes, kidneys, lungs, pancreas,
in loss of amylase and lipase production. spleen (LD-3); skeletal muscles, liver, intestine (LD-4 and LD-5).
• Icterus, lipemia, and hemolysis do not interfere with • LD-1 is relatively abundant in cardiac muscles, whereas LD-5 is
turbidimetric lipase assays. more abundant in skeletal muscle.
• Reference method: Cherry-Crandall • LD-1 is not found in the skeletal muscles and liver.
• It involves hydrolysis of olive oil after incubation for 24 hours • LD-2 is the major isoenzyme in the sera of healthy persons.
at 37°C and titration of fatty acids using NaOH.
• RBCs and cardiac tissues contain high levels of LD-1 and LD-2.
• Substrate: 50% Olive oil/Triolein
• LD-3 and LD-4 are also present in in minimal activity in the
• End product: Fatty acid heart and erythrocytes.
• Reference range: 0 – 1.5 U/mL (0 – 417 U/L) • LD-4 is the most abundant isoenzyme in the skeletal muscle.
• Conversion factor: 278, from U/mL to U/L) • LD-5 is most abundant isoenzyme in the liver but almost
undetectable in the heart, RBCs, and renal cortex.
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Diagnostic Significance Direct immunoassay
• It is currently the most widely used method in the clinical
• Highest LD serum levels are seen in pernicious anemia and laboratory.
hemolytic disorders.
• LD-5 is moderately increased in acute viral hepatitis and • Serum LD is higher than the plasma LD due to release of the
cirrhosis and markedly increased in hepatic cancer and toxic enzyme from platelets.
hepatitis.
• LD activity in serum or plasma is temperature-dependent
• LD activity may be considered as a marker in occupational (mostly LD-1 and LD-5), and it varies when LD is suspended at
hazards such as in silica-induced toxicity. room temperature or in cold storage.
• An elevated total LD is a non-specific result because of its • Decreased activity is observed when samples are frozen (LD-5
presence from several tissues. is cold-labile), therefore samples should be processed within 24
hours after collection and stored at 25°C.
LD as a Tumor Marker
• There is transient elevation of total LD after blood transfusion
• LD-2, LD-3, and LD-4 are cancer markers (predominantly LD-3) but plasma level returns to baseline within 24 hours.
for acute leukemia, germ cell tumors, and breast and lung
cancers. Increased LD
Anemia (pernicious, Hepatitis and hepatic
• Serum LD is increased in metastatic CA due to its multiple hemolytic, and cancer
organ sources. megaloblastic) Muscular dystrophy
Myocardial infarction Delerium tremens
• Serum LD level is a prognostic CA marker as it may determine Leukemia Malignancy
response to therapy. Renal infarction Pneumocystis jerovecii
pneumonia
• In patients who have undergone radiotherapy for prostate
cancer, elevated LD-5 levels have been found to be strongly Creatine Kinase (CK)
indicative of high tumor proliferation rates and relapse of
following radiotherapy. • It catalyzes the transfer of a phosphate group between creatine
phosphate and adenosine phosphate.
Other LD Isoforms
• It is involved in the storage of high-energy creatine phosphate
• LD-6 represents the alcohol dehydrogenase enzyme; the sixth in the muscles.
band in electrophoresis; responsible for the metabolic
conversion of methanol and ethylene glycol to toxic compounds; • It is a dimeric molecule with small molecular size, composed of
present in patients with arteriosclerotic failure; may be elevated a pair of two different monomers called M and B.
in drug hepatoxicity and obstructive jaundice.
• It is found in small amounts throughout the body, but high
• LD composed of four C subunits is detected in spermatozoa and concentrations are in the muscles and brain, although CK from
in semen; not found yet in human serum or even in individuals brain tissue never crosses the blood-brain barrier to reach
with seminoma (malignant germ cell tumor of testicle). normal plasma.
Methods • Major tissue sources: Brain, smooth and skeletal muscles, and
cardiac muscles
• Lactate is a more specific substrate compared to pyruvate.
• Reference range: Male = 15 – 160 U/L
• LD-1 prefers the forward reaction, whereas LD-5 prefers the Female = 15 – 130 U/L CK-MB = < 6% of total CK
reverse reaction.
Isoenzymes: CK-BB (brain type), CK-MB (hybrid type), and
• LD is stable at room temperature for 48 hours and at least 6 CK-MM (muscle type)
days on storage at 4°C.
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• CK-1 is the most anodal and labile isoenzyme; CK-3 is the least Methods
anodal.
2. Sarcomeric Muscle CK
• It supports the myofibrillar structure and contractility.
• Common method: Quantitative Enzymatic • It normally has low concentration in plasma, since it is mostly
cellbound.
• Other methods: Dixon and Purdon, Campbell, Belfield and
Goldberg • ACE2 is the cellular receptor of SARS and SARS-CoV-2.
Pseudocholinesterase (PChE) • Forms of ACE: somatic (sACE – present in many tissues) and
testes (tACE)
• It is also known as the butyrylcholinesterase (BuChe) or
acetycholine acylhydrolase. • Main function: To cleave histidine-leucine sequence from a
decapeptide called angiotensin I.
• It is secreted by the liver, hence, measurement of this enzyme
reflects synthetic function rather than hepatocyte injury; a • Major tissue sources: Lungs and Kidneys
secondary liver function test.
• Other sources: Heart, muscles, neurons, macrophages, and
• It is a marker of insecticide/pesticide poisoning epitheloid cells
(organophosphate poisoning).
• Diagnostic significance: Diagnosing and monitoring of
• It also determines high exposure to nerve poisons such as sarin sarcoidosis
(methyl isopropyl fluorophosphate).
• Increased: Sarcoidosis, multiple sclerosis, pneumonia, acute
• It is used to monitor the effect of muscle relaxants and chronic bronchitis, leprosy, HIV infection, and Addison’s
(succinylcholine) after surgery; pre-operative screening for disease
patients with a history or family history of prolonged paralysis
and apnea after use of the muscle relaxant, succinylcholine, for • Sample: Serum
anesthesia.
• Substrate: Furylacryloylphenylalanine-glycylglycine (FAPGG)
• It catalyzes the removal of benzyl group from cocaine by acting
as an “antixenobiotic enzyme”. • Method: Spectrophotometric assay
• It is readily available in plasma compared to • It functions to maintain NADPH in the reduced form in the
acetylcholinesterase. erythrocytes.
• Tissue source: Liver, heart, pancreas, and CNS (white matter of • It is a newborn screening marker.
the brain)
• Deficiency of this enzyme can lead to drug-induced hemolytic
• Serum level in poisoning: Low PChE anemia after taking primaquine, an antimalarial drug.
• Decreased: Malnutrition and liver disease (acute hepatitis, • Tissue sources: RBCs, spleen, lymph nodes, and adrenal cortex
cirrhosis, and carcinoma metastatic to the liver)
• Increased: Myocardial infarction and megaloblastic anemia
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• Specimen: Red cell hemolysate and serum ACUTE MYOCARDIAL INFARCTION / CARDIAC PROFILE
CARDIAC ELEVATION PEAK NORMALIZE
Ceruloplasmin MARKER
Myoglobin 1 - 4 hours 6 - 9 hours 18 - 24 hours
• It is a copper-carrying protein with an enzymatic activity. Trop I 4 - 6 hours 12 - 18 hours 6 days
CK - MB 4 - 8 hours 12 - 24 hours 3 days
• It is a marker of Wilson’s disease (decreased ceruloplasmin Trop T 4 - 10 hours 2 days 7 - 10 days
level). AST 6 - 8 hours 24 hours 4 - 5 days
LD - Total 10 - 24 hours 48 - 72 hours 10 days
• Sample: Serum
Ornithine Carbamoyltransferase
• Sample: Serum
Trypsin
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