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Ebook Emery and Rimoins Principles and Practice of Medical Genetics and Genomics Perinatal and Reproductive Genetics PDF Full Chapter PDF
Ebook Emery and Rimoins Principles and Practice of Medical Genetics and Genomics Perinatal and Reproductive Genetics PDF Full Chapter PDF
Edited by
Reed E. Pyeritz
Perelman School of Medicine at the University of Pennsylvania,
Philadelphia, PA, United States
Bruce R. Korf
University of Alabama at Birmingham, Birmingham, AL, United States
Wayne W. Grody
UCLA School of Medicine, Los Angeles, CA, United States
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v
vi CONTENTS
6
Genetics of Male Infertility 121 Acknowledgments 228
Csilla Krausz, Viktoria Rosta, Ronald S. Swerdloff and References 228
Christina Wang 10 Noninvasive Prenatal Testing and Noninvasive
6.1 Male Infertility—Introduction 121 Prenatal Screening 235
6.2 Chromosome Anomalies 123 Charles M. Strom
6.3 Gene Defects Involved in Endocrine 10.1 Precision in Screening Tests 235
Forms of Infertility 128 10.2 Fetal Fraction 239
6.4 Monogenic Defects of Male Infertility 135 10.3 Sex Chromosome Aneuploidies and
6.5 Syndromic Monogenic Defects 138 Gender Determination 240
6.6 Conclusion 139 10.4 Segmental Aneuploidies 240
References 140 10.5 Triploidies and Haploidies 241
10.6 Mendelian Disorders in NIPS 241
7 The Genetics of Disorders Affecting the Premature 10.7 Gender Determination 241
Newborn 149 10.8 Multiple Pregnancies and Vanishing
Aaron R. Prosnitz, Jeffrey R. Gruen and Vineet Bhandari Twins 241
7.1 Introduction 149 10.9 Confined Placental Mosaicism 242
7.2 Respiratory Distress Syndrome 150 10.10 Maternal Factors 242
7.3 Bronchopulmonary Dysplasia 157 10.11 Inappropriate Use of NIPS 243
7.4 Patent Ductus Arteriosus 162 10.12 NIPT Paternity Testing 244
7.5 Intraventricular Hemorrhage 164 10.13 Noninvasive Whole Genome Fetal
7.6 Retinopathy of Prematurity 168 Sequencing 245
7.7 Necrotizing Enterocolitis 171 10.14 Conclusion 245
References 175 References 245
8 Fetal Loss 187 Further Reading 248
Rhona Schreck, John Paul Govindavari and John Williams III 11 Preimplantation Genetic Testing 249
8.1 Background 187 Svetlana A. Yatsenko and Aleksandar Rajkovic
8.2 Definition of Terms 187 11.1 Introduction 249
8.3 Early Pregnancy Loss 188 11.2 Milestones in PGT 250
8.4 Late Pregnancy Loss 202 11.3 Indications for Preimplantation Genetic
8.5 Evaluation and Management of Recurrent Testing 251
Abortion 204 11.4 Technical Approaches 253
8.6 Conclusions 205 11.5 Testing and Analysis of Embryonic
References 205 Nuclear DNA 254
Further Reading 215 11.6 Embryo Testing for Monogenic
Conditions (PGT-M) 254
9 Preeclampsia 217
11.7 PGT-M for Mitochondrial
Anthony R. Gregg
Conditions 256
9.1 The Preeclampsia Phenotype 217
11.8 Preimplantation Genetic Testing
9.2 Preeclampsia Is a Quantitative Trait
for Structural Chromosome
Disorder 218
Rearrangements 256
9.3 Preeclampsia and the Placenta 219
11.9 Preimplantation Genetic Testing for
9.4 Preeclampsia Biomarkers in Clinical
Aneuploidy 258
Use 224
11.10 Interpretation of PGT Results and
9.5 Preeclampsia Management and Future
Clinical Dilemmas 259
Health 225
11.11 PGT-A: Mosaicism 262
9.6 Genetic Basis of Preeclampsia 226
11.12 Advantages and Limitations of PGT 262
9.7 Preeclampsia and Animal Models 228
CONTENTS vii
LIST OF CONTRIBUTORS
ix
x LIST OF CONTRIBUTORS
The first edition of Emery and Rimoin’s Principles and edition. The decision to split the book into multiple
Practice of Medical Genetics appeared in 1983. This was smaller volumes represents an attempt to divide the con-
several years prior to the start of the Human Genome tent into smaller, more accessible units. Most of these
Project in the early days of molecular genetic testing, are organized around a unifying theme, for the most
a time when linkage analysis was often performed for part based on specific body systems. This may make the
diagnostic purposes. Medical genetics was not yet a rec- book more useful to specialists who are interested in the
ognized medical specialty in the United States, or any- application of medical genetics to their area but do not
where else in the world. Therapy was mostly limited to wish to invest in a larger volume that covers all areas
a number of biochemical genetic conditions, and the of medicine. It also reflects our recognition that genetic
underlying pathophysiology of most genetic disorders concepts and determinants now underpin all medical
was unknown. The first edition was nevertheless pub- specialties and subspecialties. The second change might
lished in two volumes, reflecting the fact that genetics seem on the surface to be a regressive one in today’s
was relevant to all areas of medical practice. high-tech world—the publication of the 11 volumes
Thirty-five years later we are publishing the seventh in print rather than strictly electronic form. However,
edition of Principles and Practice of Medical Genetics and feedback from our readers, as well as the experience of
Genomics. Adding “genomics” to the title recognizes the the editors, indicated that access to the web version via a
pivotal role of genomic approaches in medicine, with password-protected site was cumbersome, and printing
the human genome sequence now in hand and exome/ a smaller volume with two-page summaries was not use-
genome-level diagnostic sequencing becoming increas- ful. We have therefore returned to a full print version,
ingly commonplace. Thousands of genetic disorders although an eBook is available for those who prefer an
have been matched with the underlying genes, often electronic version.
illuminating pathophysiological mechanisms and in One might ask whether there is a need for a compre-
some cases enabling targeted therapies. Genetic testing hensive text in an era of instantaneous Internet searches
is becoming increasingly incorporated into specialty for virtually any information, including authoritative
medical care, though applications of adequate family open sources such as Online Mendelian Inheritance in
history, genetic risk assessment, and pharmacogenetic Man and GeneReviews. We recognize the value of these
testing are only gradually being integrated into routine and other online resources, but believe that there is still
medical practice. Sadly, this is the first edition of the a place for the long-form prose approach of a textbook.
book to be produced without the guidance of one of the Here the authors have the opportunity to tell the story of
founding coeditors, Dr. David Rimoin, who passed away their area of medical genetics and genomics, including
just as the previous edition went to press. in-depth background about pathophysiology, as well as
The seventh edition incorporates two major changes giving practical advice for medical practice. The willing-
from previous editions. The first is publication of the ness of our authors to embrace this approach indicates
text in 11 separate volumes. Over the years, the book that there is still enthusiasm for a textbook on medical
had grown from two to three massive volumes, until genetics; we will appreciate feedback from our readers
the electronic version was introduced in the previous as well.
xi
xii PREFACE TO THE SEVENTH EDITION OF EMERY AND RIMOIN’S PRINCIPLES
The realities of editing an 11-volume set have become this large project. Finally, we thank our families, who
obvious to the three of us as editors. We are grateful to have indulged our occasional disappearances into writ-
our authors, many of whom have contributed to mul- ing and editing. As always, we look forward to feedback
tiple past volumes, including some who have updated from our readers, as this has played a critical role in
their contributions from the first or second editions. shaping the evolution of Principles and Practice of Med-
We are also indebted to staff from Elsevier, particu- ical Genetics and Genomics in the face of the exponen-
larly Peter Linsley and Pat Gonzalez, who have worked tial changes that have occurred in the landscape of our
patiently with us in the conception and production of discipline.
P R E FAC E TO P E R I N A T A L A N D
REPRODUCTIVE GENETICS
Mention the term “genetics” to most laypeople and As with all such technological advances, ethical and
they will think first of “inheritance,” the transmission legal dilemmas often come to light, and the authors in
of inborn traits from one generation to the next. In the this volume do not shy away from discussion of those,
case of Homo sapiens, this process involves sexual repro- either. Some of the ethical/legal challenges are specific
duction via gametogenesis, fertilization, embryonic and to the particular techniques and their respective intel-
fetal development during gestation, followed by labor, lectual property, while others are overarching across
delivery, and the immediate newborn period. These the entire field of maternal–fetal medicine and genetics.
processes in aggregate comprise the perinatal period, Included in that latter category are restrictions on access
and the myriad ways in which any of these steps can to needed reproductive services, due either to inequities
go wrong constitute the content of this volume. In that in health insurance coverage for expensive procedures
sense, this volume represents the quintessential aspect or to politically motivated intrusions into reproductive
of genetics for many people. decision-making, such as legislative obstacles to preg-
This volume boasts state-of-the-art updates of key nancy termination after specific (sometimes very early)
chapters in previous editions dealing with prenatal gestational ages or even for specific fetal diagnoses (such
diagnosis, infertility, newborn screening, fetal loss, and as Down syndrome).
other critical topics. In addition, several new chapters It is hoped that this volume will address the most
not present in the previous editions have been intro- current needs of medical geneticists, genetic counsel-
duced, reflecting the latest advances in molecular and ors, obstetricians, and all other healthcare profession-
bioinformatic technology to enable such impressive als interested in this most fundamental area of clinical
applications as noninvasive prenatal screening, preim- genetics and patient care.
plantation genetic testing, and highly expanded carrier
screening by next-generation DNA sequencing.
xiii
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1
Introduction to Perinatal
Disorders and Reproductive
Genetics
Susan J. Gross1,2
1Department of Genetics and Genomic Sciences, Icahn School of Medicine at
Mount Sinai, New York, NY, United States,
2Cradle Genomics, San Diego, CA, United States
screen [3]. The next major technological step, and Fetal Aneuploidy Screening: Standard screening for
what many consider the actual beginning of medical fetal aneuploidy is still used as a frontline method in
ultrasound, begins with the report of 2D ultrasound in many parts of the world and incorporates ultrasound
the 1950s for breast anatomy and neck, although the along with protein markers to determine risk for tri-
patient was immersed in water to overcome the artifi- somy 21 and other chromosomal anomalies. Nuchal
cial echoes that would otherwise be generated. Direct translucency refers to a fluid-filled space normally seen
skin “contact” 2D ultrasound arrived a few years later, behind the fetal neck on ultrasound performed in the
thanks to the Scottish Obstetrician Ian Donald and his first trimester of pregnancy. A measurement that is
engineering colleague Tom Brown [4]. Reproductive enlarged relative to gestational age is associated with
sonographers and geneticists will usually point to the Down syndrome, as well as other genetic disorders such
seminal paper by Donald, Brown, and gynecologist as Noonan syndrome [8] and skeletal dysplasias [9].
John MacVicar [5] that described their findings related Some centers look for “soft markers” that are not consid-
to abdominal masses, which included not only ovar- ered structural anomalies, but do confer increased risk
ian cancer but also the first ultrasound image of a fetal for Down syndrome, such as increased renal pyelectasis
head. While a sonographer with experience would be found on second trimester sonogram [10].
able to make sense of these images, the resolution was Ultrasound-Guided Diagnostic Procedures: Ultra-
less than optimal. Furthermore, these images were gen- sound was not initially used routinely to direct fetal
erated over time and were “static” and were not actu- diagnostic procedures. Amniocentesis was available in
ally captured in “real time.” Nevertheless, as described the 1960s, but the quality and availability of ultrasound
by Dr. Stuart Campbell, a pioneer in the field in his technology was still quite limited. Fetal injury from the
own right, the publication of this paper signaled that needle was a significant risk that was discussed with a
“the starting gun had been fired and the ultrasound patient deciding whether to undergo a procedure. How-
race had begun” [3]. ever, with the incorporation of ultrasound into prena-
One cannot overstate the role of ultrasound in the tal care, use of this technology for needle guidance has
field of perinatal genetics. Below is a brief overview become standard of care. Perfumo and Jauniaux [11] in
as the technology has continued to advance from the their review point out the pivotal role of this technology
“snowstorm” images in the 1950s to current 3D (images as “it is only the use of ultrasound-guided amniocentesis
that add depth) and 4D (incorporates time, allowing for in the 1980s that made it a very safe procedure during
assessment of movement) technologies. the first half of pregnancy.” While amniocentesis in the
Pregnancy Dating: Ultrasound dating, rather than early days was possible without ultrasound guidance,
date of first menstrual period, has become the standard procedures such as chorionic villus sampling (CVS) of
of care for dating pregnancies. Precise dating is import- the placenta or cordocentesis (also known as percuta-
ant for many reasons but is critical when trying to deter- neous umbilical blood sampling) would not have been
mine if a fetus is small for gestational age when working possible.
up a potential genetic issue. Likewise, an erroneous ges- Counseling and Surgical Aid: 3D ultrasound that pro-
tational age can result in false-positive or false-negative vides depth to the fetal image has provided geneticists
fetal aneuploidy or neural tube defect screening test with a helpful tool when counseling patients for certain
results. fetal anomalies. For example, the surface rendering pro-
Fetal Dysmorphology: It is standard of care to offer vides a clearer image of certain anomalies, especially
women routine fetal anatomy scanning during the first cleft lip and palate. In addition to defining the extent of
half of pregnancy [6]. In many centers, this detailed the finding for diagnostic purposes, having this more
scan occurs between 18 and 20 weeks. However, as recognizable image can help with patient counseling as
the technology continues to improve, a detailed sono- well as help the cleft lip and palate interdisciplinary care
gram, including fetal echocardiogram, can be obtained team prepare [12].
in the first trimester [7]. Abnormal fetal anatomy on
ultrasound exam remains one of the major reasons for 1.2.3 MR Imaging
referral to centers with expertise in fetal medicine and While CT imaging is sometimes used for maternal rea-
prenatal genetics. sons, due to increased risk for fetal radiation exposure,
CHAPTER 1 Introduction to Perinatal Disorders and Reproductive Genetics 3
its use is limited prenatally. However, MRI can be an randomized controlled trial demonstrated an increased
important adjunct to prenatal ultrasound and has risk for talipes equinovarus in the early amniocentesis
demonstrated good sensitivity for fetal CNS malforma- group [23]. CVS, which entails sampling the placenta
tions [13]. While neither ultrasound nor MRI is asso- either through an abdominal or transvaginal approach,
ciated with fetal risk, it is still recommended that this proved to be a first trimester diagnostic alternative. First
technology be used judiciously, when the results could performed in 1983 [24], the technique has become well
provide medical benefit [14]. established. While there is a small risk of false results due
to placental mosaicism, the chromosomal complement of
1.3 PRENATAL DIAGNOSTICS— the placental cells used for this procedure closely mirrors
that of the fetal cells obtained through amniocentesis.
CONFIRMING GENETIC DISORDERS
Currently, amniocentesis and CVS remain the mainstays 1.3.3 Preimplantation Genetic Testing
when it comes to confirming genetic disease during the Preimplantation genetic testing has become more
prenatal period. In the past, cordocentesis was used widely available within IVF programs and is performed
more frequently for genetic diagnoses. For example, prior to embryo transfer, following conception. Usually,
TAR syndrome that was suspected on prenatal ultra- a biopsy is performed at the blastocyst stage, allowing
sound would be confirmed based on thrombocytopenia 5 to 10 cells to be removed for further genetic testing.
and anemia observed in fetal cord blood analysis [15]. The goal is to identify unaffected embryos for transfer
However, molecular diagnosis can now be made using [25] and consequently avoid issues related to potential
cells derived from an amniocentesis or CVS sample, termination of pregnancy.
which is considered a safer alternative [16].
1.3.4 Cytogenetic and Molecular Techniques
1.3.1 Amniocentesis Used for Prenatal Diagnosis
Amniocentesis was first described in the 1800s when Once fetal or placental cells could be retrieved, the
fluid was removed to treat polyhydramnios [17]. How- evolution of prenatal diagnosis tracked with available
ever, although used for other reasons over the inter- cytogenetic and molecular technologies that were con-
vening years, it was really not until the 1950s that the currently available. The first paper documenting 46
procedure became a part of obstetric care when it was chromosomes in humans was not published until 1956
demonstrated that spectrophotometric analysis of bili- [26]. In the early days of amniocentesis, G-banding was
rubin in the third trimester could be used to diagnose not available and would not become part of cytogenetic
and manage Rh disease [18]. This was quickly followed practice until the 1970s. The next major milestone was
by genetic diagnosis of sex using Barr body analysis [19]. the addition of molecular approaches to chromosomal
However, the big hurdle that needed to be overcome analysis. FISH probes allowed for the identification of
was the ability to culture the cells from the amniotic microdeletions that could not be seen using standard
fluid. With that achievement, prenatal diagnostics could karyotyping alone. Currently, microarrays are consid-
begin in earnest in the 1960s with a seminal publication ered standard of care for prenatal diagnosis in the United
that described fetal chromosomal analysis [20]. 1968 States, especially in the setting of fetal anomalies or still-
saw the first reports of fetal Down syndrome as well birth. If no structural anomalies are seen, conventional
as galactosemia diagnoses [21,22]. Multiple case series karyotype and microarray should be discussed with the
quickly followed, and amniocentesis has remained the patient [27]. Nor is prenatal exome sequencing still con-
cornerstone for genetic screening confirmation and sidered experimental. In the presence of fetal anomalies
diagnosis to the present day. or a single major anomaly suggestive of a genetic disor-
der where microarray is negative or unavailable, exome
1.3.2 CVS sequencing becomes an option, similar to the postnatal
A limitation of traditional amniocentesis has remained setting [28].
its timing during pregnancy. It is a second trimester Noninvasive prenatal diagnosis is the next technolog-
test, generally offered after 15 weeks gestation. Early ical phase that is garnering a lot of activity and attention.
amniocentesis was proposed as a solution. However, a It holds out the promise of removing the risk for fetal loss
4 CHAPTER 1 Introduction to Perinatal Disorders and Reproductive Genetics
that is associated with amniocentesis or CVS. While the microdeletion syndromes [35]. Most problematic is an
risk is low, 0.1%–0.3% in expert hands [29] and may not ongoing confusion regarding the difference between a
even confer excess risk especially if the fetus is not anom- screening test that can only provide a risk assessment
alous [30], many women prefer to avoid invasive testing versus a true diagnostic test. In response, leading profes-
if possible. The initial avenues explored were the isola- sional organizations have created open access calculator
tion of trophoblasts from the endocervical canal [31] and tools to help healthcare professionals provide accurate
fetal cells from the maternal circulation [32]. The focus information to patients regarding PPVs and negative pre-
is on the separation and extraction of these cells, as once dictive values (NSGC PQF NIPT Calculator https://ww-
isolated, current molecular sequencing techniques and w.perinatalquality.org/Vendors/NSGC/NIPT/). It is also
various analytic approaches become possible. Isolation of worth noting that the entire fetal genome has already
intact fetal cells has now largely been superceded by direct been sequenced [36] using shotgun sequencing of mater-
sequencing of cell-free fetal DNA, as discussed below. nal plasma DNA. The approach is not practical for broad
clinical testing at this time, but it demonstrates that non-
invasive fetal sequencing can already be performed with
1.4 PRENATAL SCREENING FOR GENETIC currently available technologies.
DISORDERS—ANEUPLOIDY AND SINGLE
1.4.2 Carrier Screening for Genetic Disorders
GENE
Even prior to molecular diagnostics, fetal risk assess-
1.4.1 Fetal Aneuploidy Screening ment for Mendelian disorders was possible. A good
It is notable that even during the 1960s and 1970s, when pedigree analysis could provide valuable information in
amniocentesis was the only genetic testing option, women the case of a woman with a family history of Duchenne
were still involved in a screening program. Amniocente- Muscular Dystrophy or a previous child with cystic
sis was not universally available and therefore age alone fibrosis. The population-based Tay Sachs screening pro-
was the clinical feature, absent any personal or family gram was successfully executed using maternal enzyme
risk, used to determine who would be offered a diagnostic analysis and was the first multi-disease panel as some
procedure. The age cut-off at 35 was used based on a few of the programs also screened for familial hypercholes-
factors including resource allocation and the “balance” of terolemia using cholesterol levels. Hemoglobin electro-
1/200 risk of fetal loss versus 1/200 risk of any fetal chro- phoresis and a simple MCV are considered the first-line
mosomal anomaly at that maternal age. However, the screening tests for hemoglobinopathies [37].
medical community always appreciated that despite the However, there is no doubt that molecular technol-
increased risk in this older maternal age group, most chil- ogies, in particular next-generation sequencing (NGS),
dren with Down syndrome are born to women less than have altered the carrier screening landscape. The cur-
35. Even in patients with affected offspring, the risk is rent approach is to sequence the mother and if a patho-
still only a few percentage points at most. Therefore, con- genic or likely pathogenic variant is identified, then the
ceptually, whether we are looking at the first “AFP only” father of the baby also undergoes genetic testing in the
single marker aneuploidy screening test, standard first tri- case of an autosomal recessive disorder. While carrier
mester screening or the latest cell-free DNA noninvasive screening is on one hand a diagnostic for the mother
prenatal screening (NIPS) approach, they all came about (if a pathogenic cystic fibrosis variant is found, she is
to help refine the initial “age alone” risk algorithm [33]. indeed a carrier), the term “screening” is used because
NIPS has dramatically changed the landscape with pos- the purpose of the test is to assess the risk to fetus. The
itive predictive values (PPVs) that are several times bet- benefits of NGS technology are manifold, including the
ter than standard first trimester screening that combines ability to test for more disorders in a highly precise and
first trimester ultrasound NT and biomarkers (45.5% vs. efficient way. However, the larger the panels, the more
4.2% for trisomy 21% and 40.0% vs. 8.3% for trisomy 18) likely a patient will receive a “positive” screen result. As
[34]. However, despite this major leap forward in test more variants will be found in genes associated with
performance, NIPS has not been without controversy. increasingly rare disorders, the odds that the other par-
Additional disorders have been added with poor PPVs ent will likewise have a pathogenic variant in that same
and varied clinical utility, such as rare aneuploidies and gene become more unlikely. Thus, there is significant
CHAPTER 1 Introduction to Perinatal Disorders and Reproductive Genetics 5
concern that larger panels will result in downstream comparable to diabetes or coronary heart disease may
anxiety and costs but will not necessarily provide useful not be feasible. Some screening and even diagnostic tests
information specific to the current pregnancy. Similar to may require more “shared decision-making” approaches
aneuploidy screening, single gene variant detection has in the future. However, there is still the need for rigor-
already been reported using cell-free DNA in maternal ous analytic, clinical validity and ultimately clinical
plasma [38] using droplet PCR. Other approaches have utility studies if testing is to be provided to millions of
also been reported [39,40]. A clinical test is already on women worldwide who are or seek to become pregnant.
the market for select de novo and paternally inherited Professional bodies have tried to address the question
variants, although it is not considered to be sufficiently with an approach that does not necessarily provide a
validated to be incorporated into standard of care [41]. defined panel of diseases, but rather seeks to specify
characteristics of disorders that may warrant screening,
1.5 THE END OF THE BEGINNING AND for example, whether the condition could result in sig-
nificant disability or knowledge of the condition could
WHAT LIES AHEAD enhance delivery planning. Conversely, guidance also
From a broad perspective, the above survey of prenatal can address what disorders should be excluded, such as
genetics tells us that we have attained what would have adult-onset disorders or high allele frequency variants
seemed like a far-off achievement only a few decades but low penetrance such as MTHFR [44]. Others have
ago. We already have the technology to interrogate the looked closely at allele frequency and the identification
fetal genome during pregnancy and the preimplantation of carrier couples rather than just one parent. Assessing
period. Treatments will become available and newer only 40 genes with carrier rates >1.0% would identify a
diagnostic methodologies seem poised to fulfill the substantial number of panethnic carrier couples, while
promise of noninvasive testing. There remains much to the addition of genes with lower carrier rates followed
be done with respect to scalability and cost reduction; the principle of “diminishing returns” [45]. Genome
however, technological advances will continue and one sequencing will ensure that this conversation regard-
can expect within a few years to see prenatal diagnostics ing prenatal test expansion will become more, not less,
move forward on all fronts as well, opening the door to important in the future.
true precision medicine prior to delivery. While there
is much to celebrate, the same questions that have con- 1.5.2 Women’s Autonomy
cerned the specialty in the past have not diminished and Related to the above discussion of what prenatal tests
perhaps take on more urgency as our ability to finally should be offered is the question of who gets to decide.
access the fetal genome has arrived. For example, Canadian guidelines recommend invasive
prenatal diagnosis be offered to women at high risk [46],
1.5.1 We Can Do It, but Should We Do It? while in the United States, all women have the option of
There has always been the push and pull between our screening versus diagnostic testing [47]. Some authors
ability to “do more” to benefit patients versus primum have approached the issue of women’s autonomy via the
non nocere—first do no harm. Thoughtful clinicians lens of informed consent and the “routinization” of pre-
and leaders in the field addressed this problem even natal testing, such that women are making decisions but
when screening panels were still just a few disorders in based on limited knowledge. In addition, “[s]upport for
size [42]. Andermann et al. [43], in a WHO bulletin, access to prenatal genetic tests and abortion services and
applied the well-known Wilson and Jungner principles advocacy for robust informed consent processes grow
of screening criteria to the genomic era. Many of the key out of the same ethical commitment to respect for auton-
concepts still hold, including the “North Star” of clinical omy” [48]. Other authors have noted that historically,
utility. Even if a screening test works consistently well in the focus has been on the risk for fetal loss following
the laboratory and can even detect disorders of interest invasive testing. Rather, an autonomy-based approach
in the clinical setting, should it be offered if there is no would help women identify what risk most concerns
demonstrable positive impact on outcomes? Certainly, them personally. For some it may indeed be the risk of
there are challenges as often specific genetic disorders fetal loss but for other women, it may be the risk of hav-
tend to be rare, and large broad-based research studies ing a child with a significant genetic abnormality [49].
6 CHAPTER 1 Introduction to Perinatal Disorders and Reproductive Genetics
[14] Committee on Obstetric Practice. Committee opin- dation. Joint position statement from the International
ion no. 723: guidelines for diagnostic imaging during Society for Prenatal Diagnosis (ISPD), the Society for Ma-
pregnancy and lactation [published correction ap- ternal Fetal Medicine (SMFM), and the Perinatal Quality
pears in Obstet Gynecol. 2018 Sep;132(3):786]. Obstet Foundation (PQF) on the use of genome-wide sequenc-
Gynecol 2017b;130(4):e210–6. https://doi.org/10.1097/ ing for fetal diagnosis. Prenat Diagn 2018;38(1):6–9.
AOG.0000000000002355. https://doi.org/10.1002/pd.5195. https://www.perinatal-
[15] Donnenfeld AE, Wiseman B, Lavi E, Weiner S. Pre- quality.org/Vendors/NSGC/NIPT/.
natal diagnosis of thrombocytopenia absent radius [29] American College of Obstetricians and Gynecologists’
syndrome by ultrasound and cordocentesis. Prenat Committee on Practice Bulletins—Obstetrics, Commit-
Diagn 1990;10(1):29–35. https://doi.org/10.1002/ tee on Genetics, Society for Maternal–Fetal Medicine.
pd.1970100106. Practice bulletin no. 162: prenatal diagnostic testing for
[16] Society for Maternal-Fetal Medicine (SMFM), Gandhi genetic disorders. Obstet Gynecol 2016;127(5):e108–22.
M, Rac MWF, McKinney J. Radial ray malformation. https://doi.org/10.1097/AOG.0000000000001405.
Am J Obstet Gynecol 2019;221(6):B16–8. https://doi. [30] Salomon LJ, Sotiriadis A, Wulff CB, Odibo A, Akolekar
org/10.1016/j.ajog.2019.09.024. R. Risk of miscarriage following amniocentesis or
[17] Elias S, Simpson JL. Amniocentesis. In: Milunsky A, editor. chorionic villus sampling: systematic review of literature
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2
Prenatal Screening for Neural
Tube Defects and Aneuploidy*
Robert G. Best
Department of Biomedical Sciences, University of South Carolina School of Medicine Greenville,
Greenville, SC, United States
2.2 PRENATAL SCREENING FOR BIRTH flat geometry, develop a transverse fold that deepens
into a groove along the axis of development, that ulti-
DEFECTS mately circularizes to give rise to a tubular structure as
Screening tests are designed to identify the potential for the leading edges of the neural fold begin to touch and
health disorders from among an otherwise healthy pop- connect with each other [17,18], providing the founda-
ulation. Screening differs from diagnostic testing in that tional structures for the brain and spine. Failure of the
false positives and negatives are expected and are incor- neural tube to close completely results in a disruption of
porated into the schema. Prenatal screening focuses pri- these central structures of the nervous system. Although
marily on the risk of adverse health conditions of the failure to close can result in a complete failure of the for-
fetus that are both serious and common. Current stan- mation of the neural tube and all resulting structures
dards for healthcare screening advanced by the World downstream (complete dysraphism), most commonly
Health Organization based on iterative improvements of the errors are confined to incomplete closure at one end
earlier criteria proposed by Wilson and Junger [13,14] or the other. When the failure involves the caudal end,
require that the screening test responds to a recognized the developmental failure results in an opening along
need for a defined target population, reflects scientific the spine (spina bifida), whereas failure at the cephalic
evidence that the screening program is effective, is end results in a dramatic disruption of the primary
designed to be equitable across the entire target popula- structures of the brain and cranial vault (encephalocele,
tion, that the benefits outweigh any harms, and that the anencephaly). These two anomalies are almost equally
program integrates education, testing, clinical services, common and account for approximately 90% of all
and program management [13]. NTDs [19].
Research around the Health Belief Model exploring Morbidity and mortality are variable depending upon
the motivation of patients to accept available testing the size, location, and fine structure of the defect. Spina
identifies the patient’s own perceptions of susceptibility, bifida is typically associated with paralysis or weakness of
severity, benefits, and barriers as critically important, the lower structures of the body but the extent is highly
conditioned on beliefs of self-efficacy (i.e., an ability to variable and ranges from a lack of clinical impairment to
take effective action) [15,16]. Decisions to participate are fetal or neonatal death [18]. Anencephaly is considered to
also affected by a variety of modifying factors (e.g., race/ be uniformly fatal with death early in the postnatal period
ethnicity, age, education, etc.) and internal or external for babies that survive to term [20].
cues that trigger action (e.g., receiving information from When NTDs are covered by skin or other membranes,
trusted sources). Thus, the mere availability of a test or they are considered to be closed defects. Most often, NTD
demonstration that screening is possible is not sufficient lesions are not covered with skin, and are therefore con-
in terms of public policy nor patient demand. Two pre- sidered to be open defects. This is an important distinc-
natal conditions that seem to fully meet all criteria for tion because the mechanism that leads to differences in
screening are ONTD and DS. In addition to these two AFP concentrations between the affected and unaffected
conditions, there are several other conditions for which populations is limited to open defects. Only 15%–20% of
information arises while testing for ONTD or DS that spina bifida cases are closed defects but, in general, the
bear sufficient clinical utility to merit inclusion in the prognosis is more favorable [21,22], whereas most cases
overall screening program. of anencephaly are open [23]. Biochemical screening is
therefore restricted to open NTD because the open lesion
2.2.1 Neural Tube Defects is directly related to the increased release of fetal protein
NTDs are among the most common of the serious birth into maternal circulation. It is not the intent of this chap-
defects in the population. These are major structural ter to fully characterize the range of NTDs and their vari-
developmental defects affecting the central nervous sys- ous clinical presentations.
tem that arise from an error in the maturation of the Most commonly, NTDs occur without other struc-
neural tube early in pregnancy, between 14- and 28-days tural anomalies unrelated to the development of the
postfertilization (4–6 weeks by menstrual dating). neural tube and are considered to be isolated or non-
During this 2-week period, the embryonic tissues that syndromic. Their occurrence is estimated to be 7/10,000
give rise to the spine and brain begin with a relatively live births in the general population of the United
CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy 11
States [24] with notable differences in birth prevalence be higher when minor alterations such as mosaicism
around the world [25] and variability related to race, are included [36]. The majority of chromosome abnor-
geographical location, and the availability of folic acid malities are sex chromosome alterations involving
in the diet [26]. Isolated NTDs are genetically complex extra copies of the X or Y chromosomes, monosomy X
traits with a heritability of approximately 60% [27,28] or autosomal trisomies involving chromosomes 21, 18,
with many genes associated and few genes having or 13. Approximately 1 in 700–800 children are born
been identified that clearly demonstrate major effects with trisomy 21 (DS), 1 in 6000 are born with trisomy
[29]. Like other complex traits, recurrence is increased 18 (Edwards syndrome), and 1 in 10,000 with trisomy
when there are affected first-degree relatives [30] at a 13 (Patau syndrome) [37,38]. Most autosomal trisomies
rate of approximately the square root of the population are caused by nondisjunction during maternal meiosis,
birth prevalence and less so for more distant affected a process that is more frequent with advancing mater-
relatives [28]. A number of environmental factors have nal age [39].
been identified that influence the development of the
neural tube including folic acid, folate antimetabolites, 2.2.2.1 Down Syndrome
and type I diabetes [31–33]. Since the great majority of DS is a complex clinical phenotype that results from
NTDs occur in the absence of a positive family history, trisomy of part or all of chromosome 21. DS is the most
prenatal identification is largely dependent upon gen- common autosomal aneuploidy occurring in humans,
eral population screening through AFP or ultrasound with a current birth prevalence of approximately 1:700
examination. live births [38] and higher birth frequency among
NTDs can also appear in syndromic forms asso- older mothers. People with DS typically have an IQ
ciated with structural defects unrelated to the neu- in the mildly to moderately low range with character-
ral tube. Recurrence risks for syndromic NTDs are istic facial features that may include epicanthal folds,
highly variable and are dependent on the etiologic upward slanting palpebral fissures, flattened facial pro-
mechanisms. For example, Meckel–Gruber syndrome file, short neck and small ears, hypotonia, hyperflex-
is a rare disorder with a birth prevalence of 2.6 per ibility, single transverse palmar creases, and a variety
100,000, inherited in a single-gene autosomal recessive of other benign or mild features [40]. Individuals with
pattern and is associated primarily with encephalo- DS are susceptible to duodenal atresia, Hirschsprung
cele [34]. In contrast, complete or partial aneuploidy disease, patent ductus arteriosus, early-onset Alzhei-
may also involve disruption of the neural tube during mer disease, and acute leukemia [41,42]. Their per-
development, with recurrence risks dependent on
sonalities are frequently described as affectionate and
the mechanism through which the chromosomal pleasant albeit somewhat complex [43]. The combina-
imbalance arose. Most syndromic forms of NTDs are tion of a relatively high birth prevalence, complexity
relatively rare and are therefore challenging to study of the clinical phenotype, older maternal age at birth,
for recurrence and the degree to which environmental and relatively long life expectancy no doubt contribute
factors might be involved. While it is not the intent of to the high level of interest in prenatal screening and
this chapter to address the fine points of the occurrence diagnosis.
and distribution of all forms of NTDs, it is important
to recognize differences in recurrence risks as a limit- 2.2.2.2 Trisomy 18
ing factor in the estimation of patient-specific risk cal- Another autosomal aneuploidy, trisomy 18 (Edwards
culations in screening. Biomarker screening is effective syndrome), demonstrates an altered biomarker profile
for any ONTD independent of its causal mechanism. compared with unaffected pregnancies and is there-
fore also detectable in multiple marker screening [44].
2.2.2 Down Syndrome and Aneuploidies in Edwards syndrome has a significantly higher mor-
Pregnancy bidity and mortality compared with DS, is subject to
Studies in the 1970s showed that chromosomal abnor- higher rates of spontaneous abortion, and is far less
malities affect approximately 1 in 160 live births [35]. common [45–47]. Because of its rarity and differences
A more recent European study of second trimester in severity and life expectancy, the public health ratio-
amniocenteses demonstrated that this incidence may nale for trisomy 18 screening is considerably weaker
12 CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy
than for DS and likely would not justify screening on 2.2.2.4 Aneuploidy and Spontaneous Fetal Loss
its own. Inasmuch as the markers that are employed Pregnancies affected by aneuploidy have a greater risk of
for trisomy 21 may also be informative for trisomy spontaneous abortion than unaffected pregnancies. True
18, this screening can be included without undertak- estimates of this rate are difficult to ascertain as a propor-
ing any additional testing. As with all rare conditions, tion of affected pregnancies that are detected by prenatal
the positive predictive value (PPV) is relatively low. screening programs will be terminated and some may
Selecting the risk cutoff for screen positives to keep occur so early in development that the woman does not
specificity high serves to reduce unnecessary diagnos- recognize them as a pregnancy loss. A large-scale study
tic testing. showed that 43% of pregnancies with DS detected by the
first trimester chorionic villus sampling (CVS) and 23%
2.2.2.3 Other Chromosome Abnormalities of pregnancies with DS detected by the second trimester
There are several other chromosome abnormalities that amniocenteses will end in miscarriage or stillbirth [56].
occur during pregnancy. A third autosomal aneuploidy Fetal loss rates in pregnancies affected by trisomy 13 or
that sometimes survives to term is trisomy 13 (Patau 18 are even higher with 49% of pregnancies diagnosed
syndrome) [48]. This is more severe and significantly with trisomy 13 in the first trimester and 42% diagnosed
less prevalent than either trisomy 18 or trisomy 21 [46]. with trisomy 13 in the second trimester will end in mis-
While autosomal monosomies are uniformly lethal carriage or stillbirth. 72% of pregnancies diagnosed with
prenatally, several other autosomal trisomies are known trisomy 18 in the first trimester and 65% of pregnancies
to occur, but do not survive to term except in a mosaic diagnosed with trisomy 18 in the second trimester will
state. There is a very large number of partial aneuso- end in miscarriage or stillbirth [57]. This information
mies that each are extremely rare, with highly variable is vital for counseling women regarding prognoses for
phenotypes that occasionally are live born, as well as their affected pregnancies. Accurate determination of
lethal triploidies and tetraploidies that include whole fetal loss influences the a priori and posterior risk esti-
extra sets of chromosomes [49]. Each in this group of mates for the autosomal trisomies and is relevant to the
chromosomal disorders shares the properties of severe patient’s decision-making from the standpoint of the
phenotypes, low probability of survival, and low birth value of screening and diagnosis under the Health Belief
prevalence such that screening would not meet the basic Model.
features of disorders for which population screening
would be merited. Finally, there are quite a number of 2.2.3 Maternal Age as a Marker for
sex chromosome aneuploidies including Turner syn- Aneuploidy
drome (monosomy X) [50], which has a relatively mild One of the earliest and most primitive forms of screen-
phenotype but a low chance of survival to term and birth ing is to consider maternal age at the expected date of
prevalence of 1 per 10,000; Klinefelter syndrome (male delivery as a means of estimating risk for DS and other
with an extra X chromosome)—a syndrome involving aneuploidies. This is a simple, cost-free approach to
infertility and some comparatively mild phenotypic fea- identifying pregnancies that merit consideration for
tures affecting 1 per 1000 live born males [51]; trisomy diagnostic testing to identify chromosome abnormali-
X female and disomy Y males with similar birth prev- ties.
alence to Klinefelter that demonstrate clinical features The association between advanced maternal age and
sufficiently unremarkable as to not be considered to an increased risk of DS was first described in the 1930s
constitute a physical syndrome [52,53]; and others with [58]. A multitude of subsequent studies have confirmed
multiple extra copies of the X and/or Y chromosome this association and defined its magnitude. The risk of
[54,55]. While there might be some value and interest DS and other aneuploidies increases with maternal age,
in identifying one or more of these chromosome abnor- so that a 40-year-old woman has a more than 13-fold
malities prenatally, the costs would generally be consid- higher risk of having a pregnancy affected by DS than
ered to outweigh the benefits under most circumstances. does a 20-year-old woman [59]. Nevertheless, in terms
These might be considered to be off-target secondary of raw numbers, far more autosomal trisomies occur
findings discovered during clinical screening for DS, to younger women who are not considered to be of
however. advanced maternal age.
CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy 13
The molecular basis for the association between With rare exception, AFP is not produced in the healthy
maternal age and aneuploidy is an increased rate of mei- adult [60], so the vast majority of AFP in maternal cir-
otic nondisjunction in aging oocytes [39]. Oocytes are culation is fetal in origin, passing through the fetal kid-
suspended in the dictyotene stage of prophase I from neys into the amniotic fluid, and then through the fetal
the time they are formed during fetal development until membranes into maternal circulation [61]. Maternal
they are fertilized in adulthood. During this protracted serum AFP (msAFP) appears at dramatically lower con-
time in prophase, the chromosomes are kept aligned on centrations than amniotic fluid AFP (afAFP), demon-
the equatorial plate by chiasmata, the sites of recombi- strating approximately an additional 1000-fold gradient
nation. In most cases of maternal nondisjunction, it is comparing maternal circulation to amniotic fluid (Fig.
thought that aging causes deterioration of the chiasmata 2.1). Thus, there is nearly a one-million-fold difference
and subsequent misalignment of sister chromatids. This between the fetal serum and maternal serum during
results in missegregation of chromosome pairs to the the second trimester. Throughout pregnancy, median
daughter oocytes [39]. msAFP levels change predictably in unaffected pregnan-
cies according to gestational age [62,63].
2.2.4 AFP as a Biomarker of Fetal Because of the gestational age dependence of AFP
Development in Maternal Circulation in amniotic fluid and maternal serum, AFP levels are
2.2.4.1 AFP in Unaffected Pregnancies normalized by first establishing median levels of AFP
AFP is a protein produced almost exclusively by the for each week of gestation measured in International
fetus, and it is therefore mostly contained in the fetal cir- Units (IU) per mL for amniotic fluid or mIU per mL
culation. During the optimal gestational period for NTD for msAFP. Alternatively, labs may express concentra-
screening (16–18 weeks of gestation), AFP is also pres- tions in micrograms or nanograms per mL (afAFP and
ent in amniotic fluid, but at approximately a 1000-fold msAFP, respectively). The patient-specific values are
lower concentration than in fetal circulation, with entry then calculated as multiple of the median (MoM) by
into the amniotic fluid primarily through the kidneys. dividing the patient’s measured AFP concentration by
Figure 2.1 Mean concentrations of alpha-fetoprotein (AFP) in maternal serum, amniotic fluid, and fetal serum
at various stages of pregnancy. (From Haddow, JE. prenatal screening for open neural tube defects, Down’s
syndrome, and other major fetal disorders. Semin. Perinatol. 1990;14:488–503, with permission.)
14 CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy
Figure 2.2 Distribution of maternal serum alpha-fetoprotein (AFP) (in MoM) in anencephalic, open spina
bifida, and unaffected pregnancies.
the appropriate median value. The distribution of val- statistically lower when the fetus has DS/trisomy 21 [66].
ues across all unaffected pregnancies is centered at 1.00 Prior to the discovery of AFP as a potential biomarker
MoM, approximating a log-Gaussian distribution [64]. for DS, maternal age served as the only prenatal popula-
tion screening test. As a test for DS, maternal age is com-
2.2.4.2 AFP in Pregnancies Affected with Neural bined with msAFP to identify pregnancies that merit
Tube Defects diagnostic testing or other follow-up [67]. Although the
The basis of msAFP as a screening test for ONTD is that sensitivity and specificity of msAFP plus maternal age
AFP in the amniotic fluid attains higher concentrations as a screening test is relatively poor, its adoption as a
when the fetus has an open defect because the protein screening test represented a major advancement for pre-
can pass directly into the amniotic fluid without having natal screening in that women of any age could benefit
to clear through the kidneys. This results in dramati- from testing. While it is well known that the frequency
cally higher levels in maternal circulation in pregnan- of DS is indeed positively correlated with increased
cies affected with ONTDs. Maternal serum AFP values, maternal age, it has been less well appreciated that most
expressed in MoMs on a log10 scale approximate a Gauss- DS is not identified when age alone is used as the pri-
ian distribution for the unaffected, open spina bifida and mary screening test. Further study of other potential
anencephaly populations (Fig. 2.2). Because these values biomarkers during pregnancy led to the discovery of
are normally distributed, each distribution can be fully more than a dozen potential markers for DS and a wide
described by the mean and variance or standard devia- range of other birth defects, the details of which are pro-
tion. A screening cutoff of 2.0–2.5 MoM is typically used vided below. AFP remains the only marker in clinical
to discriminate pregnancies that are screen positive for use to screen for ONTD to date, however.
ONTD and which merit diagnostic testing or further
evaluation. Direct testing of afAFP levels requires an 2.2.5 Prenatal Screening—Primary Focus on
invasive procedure (amniocentesis) and provides a diag- NTD and Down Syndrome
nostic test for ONTDs when paired with acetylcholines- Placing the many prenatal screening options into per-
terase (AChE) to eliminate rare false positives [65]. spective requires one to step back and take stock of the
evolution of screening. Initially, screening was cen-
2.2.4.3 AFP in Pregnancies Affected with Down tered on AFP for NTD identification with calculation
Syndrome of patient-specific risks for DS as a secondary benefit.
The availability of population data on AFP levels during While AFP is a relatively poor prenatal marker for DS,
pregnancy led to the discovery that msAFP values are it was in essence free information obtained during NTD
CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy 15
screening that could be combined with maternal age The set of variables that should guide which screen-
to identify DS in younger women who would be com- ing approach to use would include which reagents and
pletely missed by age-only screening. testing platforms are readily available, common iden-
Over time, the availability of serum samples from a tifiable conditions for which interventions are feasible
large prenatal population led to the identification of doz- and desired by the patient population, the cost of avail-
ens of potential biomarkers for not only DS but an array able reagents, options for resolving positive screen tests,
of other fetal anomalies and maternal conditions as well. availability of ultrasound, and practical considerations
In a short period of time, the field shifted from identifica- around sample collection and transport.
tion of a single disorder (i.e., NTD) in a narrow range of
gestational ages under established principles for screen- 2.2.6 Biochemical Markers for Down
ing [14] into a discovery phase for both common and Syndrome and Other Conditions
rare conditions. This was paralleled by similar changes in 2.2.6.1 In Serum
newborn screening which began with just phenylketon- The availability of large numbers of blood samples col-
uria screening and progressed to routine public health lected for the purpose of NTD screening during the
screening of 30 or so conditions with the advent of tan- second trimester created the conditions necessary for
dem mass spectroscopy and other emerging technolo- biomarker discovery for DS and other disorders. As DS
gies [68,69]. In addition to serum peptides and hormonal screening became routine and the availability of first
biomarkers, discovery of nonbiochemical markers such trimester diagnostic testing expanded during the 1980
as ultrasonic biometric measurements that could be and 1990s, study of biomarkers in maternal circulation
incorporated into screening was also proliferating. during the first trimester began to be explored to per-
In making sense of the many options for screening mit a wider range of pregnancy management options for
there are two views one might consider: 1) the scientific patients. Obtaining blood samples is a routine compo-
question of what combination of markers yields optimal nent of prenatal care, and most markers that are useful in
detection of DS and other disorders vs. 2) a pragmatic prenatal screening are available through serum testing.
view which takes into account the cost, performance, In the first trimester of pregnancy, various forms of
and availability of reagents, the relative public interest hCG are altered in DS, the most studied of which are
in and public health significance of different condi- free-β hCG and intact hCG. In addition, pregnancy-as-
tions, the cost of diagnostic follow-up, and other sys- sociated plasma protein A (PAPP-A) has been identified
tems issues such as the natural cadence of prenatal care as an effective biomarker in early pregnancy [71]. Serum
visits and data management challenges. The approach levels of hCG are generally elevated in DS compared with
one takes might lead to very different conclusions. For euploid pregnancies, and there is an interesting correla-
example, there is extensive research on the many differ- tion between gestational age for different forms of hCG.
ent forms of hCG that appear in blood and urine at dif- After 13 weeks, hCG is a slightly more effective marker
ferent points in pregnancy. Many (or all) of these forms than free-β hCG, perhaps because of sample stability
of hCG likely reflect the same underlying differences [72]. From 11 to 13 weeks of gestation, free-β is the bet-
between euploid and trisomy 21 fetuses and the ultimate ter marker, and prior to 11 weeks, free-β discriminates
choice by any given laboratory of which one to include between DS and unaffected pregnancies, whereas hCG
in screening might well depend more on practical con- does not. In contrast, PAPP-A levels are decreased in
siderations than on the small differences in performance DS [73]. A preponderance of the published work in first
of any given marker. In addition, the protocol for follow- trimester screening involved PAPP-A and free-β hCG
ing up on screen-positive cases, such as the emergence and the vast majority of that work combined these bio-
of cfDNA as a potentially efficacious and noninvasive markers with maternal age and measurement of nuchal
alternative to invasive procedures with significant iatro- translucency (NT) [74]. Other markers that have been
genic risks, will also matter [70]. Since the question of utilized in the first trimester include invasive tropho-
prenatal screening arises in the context of clinical care, blast antigen (ITA) which is itself a hyperglycosylated
this chapter places the central focus on the detection of form of hCG (↑) [75], inhibin (↑) [76], AFP (↓) [77], uE3
NTD and DS using the most pragmatic, common, and (↓) [78], disintegrin and metalloproteinase domain-con-
available approaches. taining protein 12 (ADAM 12) (↑) [79], placental growth
16 CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy
factor (PlGF) (↓) [80], growth hormone–binding pro- higher variation under suboptimal collection and trans-
tein (↑) [81], human placental lactogen (hPL) (↑) [82], portation conditions, however, and certain analytes such
and placental protein 13 (PP13) (↓) [80]. Two studies as free-β hCG may be more stable when collected as
by Alldred and colleagues systematically reviewed the blood spots as a general rule as has been suggested [95].
available literature for age plus first trimester biochemi-
cal tests [83] and biochemical tests combined with ultra- 2.2.6.3 Urine
sound [74] for readers with an interest in greater detail Maternal biochemical markers may also be evaluated
on the wide array of combinations of markers that have from urine samples collected during the first or second
been studied. Three findings of note from systematic trimester. Advantages to urine as a sample type are like
review of biochemical markers include the observations those found with blood spots. Different forms of hCG,
that screening performance was notably higher when including β-core fragment, hyperglycosylated hCG
PAPP-A was combined with free-β hCG (plus maternal (which is also called ITA), and intact hCG, are found
age) in a double marker test compared with AFP and in urine as is estriol. Alldred et al. reviewed 19 studies
free-β hCG (plus maternal age); that triple tests were involving 18,013 subjects with 527 true cases of DS com-
associated with higher sensitivity but were not statisti- paring the performance of urinary markers alone and
cally better than the double test with PAPP-A and free-β in combinations in first trimester pregnancies without
hCG; and that higher-order combinations showed simi- consideration of maternal age for four forms of hCG
lar patterns to the double and triple tests during the first (total hCG, free-β hCG, β-core fragment, and hyper-
trimester with marginal gains using more markers. glycosylated hCG/ITA); in the second trimester with-
In the second trimester, we continue to see various out consideration of maternal age for estriol, total hCG,
forms of hCG showing elevated levels in DS. Biomark- free-β hCG, β-core fragment, hyperglycosylated hCG/
ers studied included AFP (↓) [66], uE3 (↓) [5], free-β (↑) ITA, and gonadotropins; and in the second trimester
[84], total hCG (↑) [85], free-α hCG (↑) [3], inhibin A with consideration of maternal age for estriol, β-core
(↑) [86], pregnancy-specific β 1-glycoproteins (SP1) (↑) fragment, free-β hCG, and hyperglycosylated hCG/
[87], CA125 (↓) [88], PAPP-A (↓) [89], PlGF (↑) [90], ITA [96]. While hyperglycosylated hCG alone performs
and ProMBP (↓) [91]. A systematic review of the 12 quite well as a biomarker for DS, the combination of
best and most thoroughly evaluated strategies with sec- hyperglycosylated hCG, β-core fragment, and maternal
ond trimester tests alone and in combinations revealed age performed the best with an estimated detection rate
detection rates between 41% (AFP only plus maternal of 92% with specificity set at 95%. The highest perfor-
age) and 84% (a 5-biomarker test plus maternal age) at a mance noted came from a single study of second tri-
fixed false-positive rate (FPR) of 5% [92,93]. mester AFP and β-core fragment to estriol ratio with
consideration of maternal age that yielded a 90% sensi-
2.2.6.2 Blood Spots tivity with FPR of 5% [96].
Blood spots offer an alternative approach to sample col-
lection for some serum markers. Sample collection is 2.2.7 Reagents and Platforms in Clinical
somewhat less invasive (finger prick vs. phlebotomy) Perspective
and perhaps more convenient when blood is not already The scientific literature that has been established around
being drawn for other purposes as it does not require a the wide range of biomarkers in their many different
phlebotomist. Analyte stability may be higher or lower forms throughout the course of pregnancy describes
depending on the analyte and the conditions under a broad array of potential approaches toward prenatal
which samples are shipped and stored prior to testing. screening. In clinical practice, however, laboratories are
Palomaki et al. compared screening performance for constrained by the specific set of assays that are available
hCG and PAPP-A in blood spots and fresh maternal for clinical use. Biomarkers for which assays are avail-
serum samples and found higher variance in weight-ad- able for use only in other countries or that are limited
justed MoM values for both hCG and PAPP-A using to research use only applications are not candidates
blood spot collection and projected a somewhat lower for clinical use by any given laboratory. In addition,
screening performance for DS based on those differences instrumentation is itself expensive, and specific plat-
[94]. Analyte stability in fresh serum may be subject to forms all offer only a limited choice of assays, and this
CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy 17
further constrains the set of tests that a laboratory may and measurement of fetal structures and biophysical fea-
reasonably offer. Once a reagent platform is established tures associated with pregnancy came to be studied in nor-
in a laboratory, there is a form of technological lock-in mal pregnancies as well as pregnancies associated with DS
that occurs that limits the addition of new markers to and other disorders. Two ultrasound features of particular
the screening menu, particularly for smaller laborato- note are NT and nasal bone.
ries similar to what has been seen with other emerging
technologies [97,98]. In extreme cases, a specific analyte 2.2.8.1 Nuchal Translucency
might be so valuable in the context of screening that NT is the term used to describe a collection of fluid
it must be included even when the added cost is rela- behind the fetal neck recognized during the first tri-
tively high, but for most markers, there is only a small mester (Fig. 2.3). While all fetuses have some degree
incremental gain in performance for adding any specific of measurable NT, fetuses with trisomy 21, as well as
marker. As an example, adding free-α hCG or substitut- other chromosome abnormalities, have measurements
ing free-β hCG for a different form of hCG might easily that are two- to threefold larger than that of unaffected
be passed over by a laboratory if reagents are expensive, fetuses [99], making it a powerful marker for estima-
hard to acquire, pose sample collection challenges, or tion of the risk of fetal aneuploidy. In addition to its
exist only on a platform not available to the laboratory. role in aneuploidy screening, an increased NT has also
been identified in a multitude of single-gene disorders
2.2.8 Nonbiochemical Markers from and structural malformations (e.g., congenital cardiac
Ultrasound defects, renal malformations, neuromuscular abnor-
As prenatal ultrasound has become iteratively more refined malities) [100,101]. For this reason, any fetus with an
throughout the 1980s and beyond, reliable identification NT ≥ 3–3.5 mm should have a targeted ultrasound
Figure 2.3 Nuchal translucency measurement in the first trimester. Nuchal translucency (NT) within average
range: (A) fetal prone position and (B) Fetal supine position. Increased NT: (C) prone and (D) supine.
18 CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy
alongside biochemical markers is effective. Among the enters the amniotic fluid through the fetal kidneys and
ultrasound markers, the inclusion of NT is well-docu- then diffuses across the fetal membranes and tissues to
mented as being effective and may be enhanced by the enter the maternal circulation will be affected by the
inclusion of one or two other ultrasound markers. There size of the liver and kidneys, the timing of gene expres-
is a large body of evidence supporting the combination sion during pregnancy, and the surface area and mass
of NT, PAPP-A, and free-β hCG with maternal age as an of the extraembryonic tissues (amnion, chorion, pla-
approach to screening for DS in the first trimester [74]. centa, etc.). Consequently, the expected values of most
biomarkers in affected and unaffected pregnancies are
2.3 RISK DETERMINATION AND gestational age-dependent. For any given biomarker, it
is therefore vital to know the expected distributions for
THRESHOLDS both the affected and unaffected populations across the
Screening tests differ from diagnostic tests in that there range of gestational ages for which screening is offered.
are false positives and false negatives that arise during Many or most biomarkers approximate (or can be statis-
the testing process. In the case of prenatal screening for tically manipulated to approximate) a Gaussian distri-
NTDs and DS, this arises from the overlapping distri- bution by establishing the median values of the marker
bution of screening markers alone or in combination in unaffected pregnancies at different gestational ages to
between the affected and unaffected populations. In serve as a reference value. Each measured patient value
most cases, it is possible to increase the detection rate is divided by the median for the specific gestational
by tolerating a higher FPR and vice versa. Choosing the age at the time the sample was taken to establish a unit
optimum tradeoff between detection and false positives referred to as a MoM [64]. The expected value within
might take into consideration historical norms (e.g., risk the unaffected population is 1.0 MoM by definition for
of DS to a 35-year-old woman), a population norm (e.g., every gestational age, and thus the challenge of chang-
increase above the general population risk), the magni- ing expectations for each biomarker by gestational age is
tude and nature of iatrogenic risks of diagnostic testing, addressed. There are just two variables required to fully
or cost. Patient perceptions of risk are also important describe a Gaussian distribution: the mean and variance
and are not typically uniform across the population. (or standard deviation). In the unaffected population,
For example, a couple experiencing their third or fourth the mean value is fixed at 1.0 MoM across all gestational
pregnancy may not perceive the iatrogenic risk of mis- ages, whereas the variance may change with gestational
carriage the same as a couple who has struggled for years age. This will be true for each biomarker that is quan-
to attain pregnancy for the first time. Consequently, an tified for screening; the mean will be 1.0 MoM and the
accurate determination of patient-specific risk from a variance needs to be established or verified for each ges-
screening test may be of great value both to the patient tational age.
and to the provider. In the case of NTDs where only a Each pregnancy population for which screening is
single marker is utilized in screening, risk computation offered must also be characterized in terms of mean and
is generally not central to decision-making. Here it is the variance. The most useful markers for screening will
relative AFP value, rather than risk that is most often be those whose distributions overlap the least with the
used to determine the threshold for a positive screen unaffected population. This would be a combination of
test. In DS screening and other aneuploidies, where the greatest magnitude of the difference in means com-
multiple markers are included in the screening protocol, pared with the unaffected population combined with
risk offers a simple reference point to define a positive the lowest values of variance.
screen test that relates to historical standards for inva-
sive testing. 2.3.1 Computation of Risk
Fetal development is of course a highly dynamic The simplest case for computation occurs when there is
process and it is hardly surprising that the biochem- a single biomarker used for screening, such as AFP for
ical markers that are used in screening as well as the NTD screening. The determination of risk is based on
presence, size, and shape of fetal structures that are a Bayesian calculation in which an a priori risk estab-
observed with ultrasound change throughout the preg- lished for the pregnancy population under study is
nancy. A fetal marker that is produced by the liver that modified by a likelihood ratio (LR) calculated from the
20 CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy
Figure 2.5 (A) Distribution of maternal serum alpha-fetoprotein (AFP) (in MoM) in unaffected and Down
syndrome pregnancies. (B) Estimation of the likelihood of an affected pregnancy associated with a specific
AFP level.
relative distances from the baseline of the affected and In the case of DS and other aneuploidies, a priori risks
unaffected distribution (Fig. 2.5). This is easy enough to typically consider the age of the mother (or the age of the
visualize when there is a single marker as it represents egg donor in the case of in vitro fertilization) and family
the length of the line for the affected population at some history. Women with a prior aneuploid pregnancy carry
measured value divided by the length of the line for the an increased risk of recurrence in subsequent pregnan-
unaffected population. A value greater than 1.0 rep- cies. For DS, the relative risk of recurrence among all
resents an increased risk, and a value less than 1.0 indi- women is approximately double [119,120]. The risk is
cates a decreased risk. The single point at which the two higher in women who carry the first affected pregnancy
distributions cross represents a singular value at which before age 35 with a relative risk of 3.5 [119]. The risk of
the risk is unchanged and is therefore the same as the recurrence for trisomy 18 is more than triple, whereas
population risk (Fig. 2.5). the relative risk of recurrence for trisomy 13 is nearly
When there are multiple markers in use, the calcu- 10-fold [119]. Women with any offspring with trisomy
lation is made in essentially the same way, but there is are at increased risk for a different trisomy in a subse-
some added complexity. Again, the calculation begins quent pregnancy [119,120]. These recurrences can be
with the a priori risk from the population. Here, how- explained by possible gonadal mosaicism, in cases of
ever, there are correlation coefficients that must be deter- the homotrisomy recurrence, or by increased rates of
mined between the various markers that are included in meiotic error in women with homo- or heterotrisomy
the screening test. These must be established for both the recurrences. These numbers may be used to alter the a
affected and unaffected populations for every combina- priori risk when counseling women with a prior affected
tion of markers included in the test. In the case of multi- pregnancy and allow better risk estimation than the tra-
ple markers, the LR is the equivalent of the Mahalanobis ditional 1% risk estimate provided to most women after
distance of the multivariate Gaussian distribution at the a prior trisomic conception.
measured values of the various analytes [118]. In practice, risk algorithms for clinical screening may
use published estimates of the population parameters
2.3.2 A Priori Risks and Distribution Limits for the means, standard deviations, and correlation coef-
Care must be taken to ensure that the a priori risk is as ficients for each of the markers and marker combina-
accurate as possible. It is also vital to establish the range tions, but larger screening programs may use in-house
of measured values for which the Gaussian distributions population parameters if they are confident that they
are stable and to address the way extreme values will be do not have ascertainment bias that might arise from
handled as the LR may behave erratically in the tails of only being able to positively identify detected cases, for
the distributions. In the case of NTD, a priori risks may example [121–124].
be significantly different based on family history, type I Several maternal variables are known to affect a pri-
diabetes, and race. ori risk estimates and/or the relative distributions of
CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy 21
different biomarkers used in screening, and corrections risk [149]. In addition, there remains testing that is not
may be made for each variable individually to provide based on serum screening including blood spot–based
more accurate patient-specific risk estimates. Correc- screening in the first trimester and urine-based screen-
tions may be made in the use of different median values ing as described below. The optimal strategy will differ
for different populations, adjustments in the calculation depending upon the population being tested and the rel-
of the MoM values, use of different population param- ative availability of medical technologies, expertise, and
eters in the risk algorithm, or adjustment of the a priori laboratory reagents.
risk estimates. This would include age [57,125], family
history [126], gestational age [2,127–129], method for 2.4.1 Second Trimester Biochemical Screening
gestational age dating [130], use of assisted reproductive for Down Syndrome and Trisomy 18
technologies [2,131,132], twins [133,134], race/ethnicity The majority of second trimester biochemical screening
[135,136], maternal weight [137–139], maternal insulin is conducted between 15 and 22 weeks of gestation, and
use [132,140–142], and cigarette smoking [143–145]. is based on modification of a maternal age–based a pri-
ori risk estimate using a Bayesian calculation with the
2.4 MODALITIES OF TESTING FOR NTD LR determined from a multivariate gaussian distribution
of four maternal serum markers: AFP, UE3, DIA, and
AND DOWN SYNDROME some form of hCG [150]. The term quad screen gener-
There remains just one effective second trimester ally refers to this set of markers. Using this method and
marker in clinical use for NTD screening and conse- setting the screen-positive risk threshold at 1:270 risk
quently a single modality for serum screening for NTD. for DS at term, the detection rate is approximately 80%
In contrast, there are far too many different combina- with a corresponding FPR of 5%. Prior to the discov-
tions of all possible markers for DS screening to merit ery and successful piloting of DIA, the test was referred
evaluation of all of them or the establishment of clini- to as triple screening and had slightly lower sensitivity
cal screening operations for most of the modalities that (∼61%) with a 5% FPR. Other markers can be substi-
have been piloted. As detection rates have increased tuted, added, or removed from the panel provided that
over time with the addition of new screening markers, the distribution parameters for maternal serum within
there is a diminishing return on the inclusion of addi- the unaffected and DS populations are known [93].
tional markers to detect residual cases, and that process Trisomy 18 risk can also be estimated from the same
seems to be approaching its limit. In addition, with the measurement of markers (including maternal age),
discovery of the comparatively higher sensitivity and although DIA is not informative in the trisomy 18 risk
specificity of circulating cfDNA as a means of directly calculation. The detection rate for trisomy 18 using a
sampling fetal chromosome copy number, and with the screen-positive risk threshold of 1:100 is similar to that
availability of excellent systematic reviews of serum and of trisomy 21 at ∼78% with a small incremental FPR
ultrasound biomarker performance, it seems likely that of 0.2%. Interestingly, some additional cases of DS are
the biochemical and ultrasound modalities will settle identified in pregnancies that screen negative for DS but
into a smaller number of well-studied protocols for DS positive for trisomy 18 [151].
screening for the foreseeable future.
There are now four primary modalities that are com- 2.4.2 First Trimester Biochemical Screening
mon in DS and other aneuploidy screening. These include with or Without Ultrasound for Aneuploidy
serum screening using second trimester biochemical Detection of DS in the first trimester is typically done
markers [146], first trimester biochemical markers with during weeks 10–13 of pregnancy (menstrual dating)
or without ultrasound [147], integrated screening using with measurement of PAPP-A and the free-β form of
first and second trimester biochemical markers with or hCG obtained from maternal serum or dried blood
without ultrasound evaluation in the second trimester spots. When combined with ultrasound measurement
[148], and contingent screening—similar to integrated of NT, the detection rate for DS is 87% at an FPR of 5%
screening with risk determination in the first trimes- [74]. By comparison, screening in the first trimester
ter and a decision for either further screening or diag- with biochemistry only was found to have a detection
nostic testing based upon the calculated first trimester rate of 68% with an associated FPR of 5% [83].
22 CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy
Focusing on the combined detection rate for trisomy do not have to wait for second trimester testing to be
18, trisomy 13, monosomy X (45,X), and triploidy using completed [153].
the AFP, PAPP-A and free-β hCG combined with NT or
cystic hygroma identification was found to be 78% with 2.5 FOLLOW-UP TO POSITIVE SCREENS—
an associated FPR of 6%. Limiting screening to trisomy NTD
18 and trisomy 13 using a protocol by Spencer et al.,
the estimated combined detection rate was 95% with an 2.5.1 Biochemical Analysis from Amniotic
associated FPR of 0.3% [152]. Fluid
Prior to the development of high-resolution ultrasound,
2.4.3 Integrated First and Second Trimester patients with screen-positive NTD tests were offered
Screening amniocentesis for biochemical diagnostic testing using
While there initially were logistical issues that complicated AFP. In the amniotic fluid, AFP levels are approxi-
the clinical application of integrating first trimester bio- mately 1000 times as concentrated as in the maternal
chemistry (with or without ultrasound) with second tri- serum. Median values of afAFP change over time, and
mester biochemistry testing, this approach has since been the determination of MoMs is a stabile unit of measure
successfully employed in screening in many settings. In from 14 to 23 weeks of gestation. There is comparatively
this protocol, maternal age is used to establish the a priori little overlap between the affected and unaffected pop-
risk for DS, PAPP-A is measured from maternal serum ulations for NTDs, and a threshold of 2.0 MoM offers
or blood spots in the first trimester, and the analytes AFP, 100% detection with very few false-positive tests. A sec-
hCG, UE3, and DIA are measured from maternal serum ond protein, AChE, is useful in diagnosis of open NTDs
in the second trimester. Ultrasound measurement of NT in amniotic fluid samples. AChE is normally absent in
may also be added from the first trimester. In the serum the amniotic fluid unless there is an open neural lesion.
integrated test where only the biochemistry results are Evaluation for AChE allows for the elimination of the
included in screening, the detection rate is 87% with an small number of false-positive afAFPs based on the 2.0
associated FPR of 5%. In the full integrated test where NT MoM threshold [65].
measurement is included, the DR increases to 95% with
an associated FPR of 5% [74,123]. 2.5.2 Prenatal Ultrasound in NTD Screening
As ultrasound equipment and techniques have become
2.4.4 Contingent Testing refined over time, positive identification of spina bifida
In the contingent model, the same overall markers are and anencephaly can often be achieved by ultrasound in
used as with the integrated test; however, free-β hCG the second trimester.
is performed in the first trimester. The screen-positive In addition to the important role that ultrasound
threshold is set such that the top 0.5% of women for DS plays in accurate dating and appropriate interpretation
risk is identified as being screen positive based on the of amniotic fluid and maternal serum AFP levels, ultra-
first trimester results alone resulting in an initial DR of sound screening for major fetal anomalies in the second
66%. The remaining women with risks for DS ≤ 1:2000 trimester has become a routine part of prenatal care in
based on first trimester results are reported out as screen many countries [154]. Detailed evaluation of most fetal
negative with no additional testing. Women whose risks anatomy is best accomplished at 18–20 weeks of ges-
are >1:2000 then complete second trimester testing. The tation as major anomalies can be diagnosed, and time
overall detection rates between the combined test and allowed for the option of pregnancy termination. While
the contingent test are roughly equal; however, the FPR many anomalies can be visualized earlier, this time also
for the combined test is 2.15% versus a slightly higher allows for better evaluation of the cardiac anatomy than
FPR of 2.4% for the contingent test. Compared with is possible at earlier gestational ages. The detection rates
the combined test, however, there is earlier diagnosis of NTDs by ultrasound vary considerably with the qual-
or resolution to screen-negative status for the 0.5% of ity of the equipment, the fetal position, the maternal
women with the highest risks. In addition, contingent habitus, and the experience of the operator. In expert
testing results in lower testing costs for serum markers hands, ultrasonography alone has 97% sensitivity and
and reduced anxiety for the 78% or so of women who 100% specificity in the detection of NTDs [155].
CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy 23
[161]. Both lemon and banana (or absent cerebellum) abnormalities; two are diagnostic, and a third and
signs were observed in 97% of fetuses with spina bifida, newer approach involves the use of a nucleic acid–based
ventriculomegaly in 75%, cisterna magna obliteration screening test.
in 68%, and diminished biparietal diameter in 61% of
fetuses. These findings, including an effaced cisterna 2.5.3.1 Diagnostic Testing
magna, a small posterior fossa, and a small cerebellum, Diagnostic testing can be performed for nearly all chro-
are strongly (>90%) associated with spina bifida [162]. mosome abnormalities through direct study of embry-
This study found that ventriculomegaly and the lemon onic or extra-embryonic cells obtained either through
sign were less frequently associated with spina bifida amniocentesis or CVS. Extensive reviews of these proce-
(81% and 53%, respectively). As nearly all fetuses with dures are available elsewhere [171,172]. Amniocentesis
closed spina bifida will have normal cranial anatomy, has the advantages of being slightly more accurate and
this may be used to differentiate between open and safer, while CVS offers the distinct advantage of allow-
closed lesions [163]. ing testing at an earlier gestational age. Amniocentesis
Sonographic identification of the area of spinal dys- is typically performed between 15 and 22 weeks of ges-
raphism is often more difficult than detecting cranial tation and is therefore not an option for screen-positive
abnormalities in spina bifida. The length of the spine diagnostic follow-up in the first trimester. CVS, however,
must be examined in the axial, coronal, and sagittal may be performed safely as early as 9 weeks of gestation.
planes [156]. The axial view is most useful for visual- In terms of accuracy of the testing, CVS obtains cells
ization of all three ossification centers and will show that are all extra-embryonic in origin and may identify
splaying of the posterior lamina in fetuses with spina false-positive chromosome abnormalities that are not
bifida [164]. If the protruding sac can be visualized, found in the fetus. By contrast, amniocentesis obtains
the thickness of the sac wall may indicate if the defect amniocytes and fibroblasts from within the gestational
is open or closed [164]. Additionally, the approximate sac which are not subject to false-positive findings.
level of the lesion can be identified, which can provide
some prognostic data regarding future neurological 2.5.3.2 Reflex Screening via Cell-free DNA
function [165]. Three-dimensional ultrasound has gar- In recent years, circulating cfDNA has been developed
nered recent attention as an adjuvant imaging tool for and refined as a noninvasive procedure for screening for
fetal anatomy [166,167]. This is a particularly useful tool fetal chromosome abnormalities [6,173,174]. Screening
in imaging the fetal spine as its entirety cannot be visu- with cfDNA has been shown to have a very high sensi-
alized in a single plane. Furthermore, three-dimensional tivity and negative predictive value (NPV) which makes
ultrasound is less dependent on the technical skills of it a highly useful test in following up on screen-positive
the operator and may uncover some spinal anomalies cases based on serum markers. While it might seem
that would otherwise go unrecognized [168]. counterintuitive to use a second screening test to follow
More recent studies have examined first trimester up on the original screen-positive test, in practice it has
sonographic markers of spina bifida. At 11–13 weeks, performed exceptionally well [175].
the nasal bone is visualized, and the NT is measured to
evaluate for aneuploidy. In the same midsagittal view, 2.6 MAINTAINING AND MONITORING
the fourth cerebral ventricle can be visualized as an
intracranial translucency. Preliminary studies indicate
SCREENING PERFORMANCE
that absence of intracranial translucency is a specific Laboratories that offer clinical testing must fully meet
marker of spina bifida [169,170] but this screen is only the prevailing standards for clinical practice in their
50% sensitive for the anomaly [170]. This has not been communities in the preanalytic, analytic, and pos-
evaluated in large-scale trials. tanalytic phases of testing. This includes a need to
establish their ability to solicit and reliably collect and
2.5.3 Follow-up to Positive Screens—Down track relevant patient information, establish gesta-
Syndrome and Other Aneuploidies tional age of the fetus, collect and transport samples,
There are three primary modes of follow-up for pregnan- validate assays for each analyte, establish norms for
cies that screen positive for DS and other chromosomal each marker across the full range of gestational ages
CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy 25
for which screening is offered, reliably measure each 2.6.2 Detection Rate and Specificity
of the analytes in use, demonstrate the consistency of Tradeoff in Multiple Marker Screening
measurement for each analyte over time and across Comparisons
different lots of reagents, demonstrate consistent One of the challenges in making comparisons between
performance against peer laboratories through pro- studies with different markers relates to the tradeoff
ficiency testing schemes, calibrate instrumentation, between sensitivity and specificity because there are
and perform epidemiological monitoring over time. a very large number of possible combinations. One
The reader is referred to published professional prac- common approach to simplify analysis in the prenatal
tice guidelines from professional societies that are screening literature is to make comparisons of detec-
updated periodically to reflect the evolving standards tion rates when FPR is held constant (often at 5%).
for clinical practice [65,72]. Alternatively, one can show the entire receiver oper-
ating characteristic (ROC) curve of each of the dif-
2.6.1 Measures of Screening Performance ferent tests to illustrate this tradeoff. ROC curves plot
Screening tests differ from diagnostic tests in that detection rate on the y-axis against FPR or (1—speci-
the distributions of affected and unaffected individ- ficity) on the x-axis. A superior test lies above and to
uals overlap. Consequently, there are false-positive the left on the ROC curve of a comparison test, and a
and false-negative tests. There are four primary mea- perfectly uninformative test is represented by the 45
sures of screening efficacy that help the practitioner degrees diagonal line. In theory, evaluation of the area
and patient understand the reliability of the screen- under the curve (AUC) for ROC curves would permit
ing results: sensitivity (or detection rate), specificity, comparison of different screening strategies; however,
PPV, and NPV. study of AUC in this context has not proven to be effec-
Sensitivity and specificity are measures of the reli- tive [176,177].
ability of the screening test relative to the correct
identification of affected and unaffected individuals,
respectively, within the population. These two mea-
2.7 KEEPING SCREENING IN PERSPECTIVE
sures are independent of the frequency of the disorder NTDs and DS are among the most common serious
in the population. Sensitivity answers the question, birth defects in human populations, and many patients
“what is the likelihood that the test will correctly detect are cognizant of their seriousness and frequency.
an affected case?”, while specificity answers the ques- Consequently, it is common for patients to want to
tion, “what is the chance that an unaffected fetus will undergo screening for these disorders. This is consistent
be correctly identified through screening?” The FPR is with published guidelines surrounding medical screen-
often used to convey the same information as specific- ing that generally confine medical screening to disorders
ity. FPR is (1—specificity) and expresses the expected that are relatively common, have some serious health
proportion of unaffected pregnancies that are identified consequence, and for which there is some actionable
as screen positive. Sensitivity and specificity exist in a strategy related to treatment or prevention. Rarer disor-
dynamic tension such that one can be improved at the ders, even if they are serious and preventable, generally
expense of the other. do not merit screening because false-positive tests tend
The second pair of measures, the PPV and NPV, are to dominate over true positives for uncommon disor-
measures of reliability with respect to test outcomes— ders. However, markers that are already being measured
the extent to which a positive or negative test can be for ONTD and DS may be suitable for interpretation of
trusted. PPV is highly sensitive to birth prevalence with other disorders (e.g., Edwards syndrome—trisomy 18)
rare disorders showing lower PPV values given fixed that would not merit the cost and implementation of a
values for sensitivity and specificity. PPV answers the screening test of their own. Rarer conditions or condi-
question, “given that I have a positive screen test, what tions associated with a lower morbidity may be passed
is the likelihood that the fetus is truly affected?” Con- over altogether in the interest of containing cost and
versely, NPV answers the question, “given that I have a avoiding unnecessary testing associated with false posi-
negative screen test, what is the likelihood that the fetus tives that result from the relatively low PPV seen in rare
is truly unaffected?” conditions.
26 CHAPTER 2 Prenatal Screening for Neural Tube Defects and Aneuploidy
2.8 SUMMARY [3] Bogart MH, Pandian MR, Jones OW. Abnormal
maternal serum chorionic gonadotropin levels in preg-
The discovery in the late 1990s that cfDNA can be reli nancies with fetal chromosome abnormalities. Prenat
ably identified in maternal blood and the subsequent Diagn 1987. https://doi.org/10.1002/pd.1970070904.
development of methodologies for directly identifying [4] Hallahan TW, Krantz DA, Tului L, Alberti E, Bu-
chromosomal material associated with DS and other chanan PD, Orlandi F, Klein V, Larsen JW, Macri
chromosomal disorders has dramatically changed the JN. Comparison of urinary free beta (hCG) and
beta-core (hCG) in prenatal screening for chromo-
practice of prenatal screening for DS and other aneuploi
somal abnormalities. Prenat Diagn 1998. https://doi.
dies [6,175,178]. The very low iatrogenic risk associated
org/10.1002/(SICI)1097-0223(199809)18:9<893::AID-
with cfDNA screening as a reflex test for screen-positive PD362>3.0.CO;2-E.
serum screening, displacing amniocentesis or CVS [70], [5] Canick JA, Knight GJ, Palomak GE, Haddow JE, Cuck-
may influence the strategy regarding the establishment le HS, Wald NJ. Low second trimester maternal serum
of decision thresholds for serum screening such that unconjugated oestriol in pregnancies with Down’s syn-
lower initial specificity might be tolerated as a means of drome. BJOG An Int J Obstet Gynaecol 1988. https://
improving overall detections rates. doi.org/10.1111/j.1471-0528.1988.tb06601.x.
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name, and it is believed chiefly on her own account. She was a
woman of much intelligence and was also practical, being an expert
compositor of types, and fully conversant with every detail of the
mechanical work of a printing-office. During this busy time she was
also postmistress of Baltimore, and kept a bookshop. Her brother
William, through his futile services in this postal scheme, had been
led to believe he would receive under Benjamin Franklin and the new
government of the United States, the appointment of Secretary and
Comptroller of the Post Office; but Franklin gave it to his own son-in-
law, Richard Bache. Goddard, sorely disappointed but pressed in
money matters, felt forced to accept the position of Surveyor of Post
Roads. When Franklin went to France in 1776, and Bache became
Postmaster-General, and Goddard again was not appointed
Comptroller, his chagrin caused him to resign his office, and naturally
to change his political principles.
He retired to Baltimore, and soon there appeared in the Journal an
ironical piece (written by a member of Congress) signed Tom Tell
Truth. From this arose a vast political storm. The Whig Club of
Baltimore, a powerful body, came to Miss Goddard and demanded
the name of the author; she referred them to her brother. On his
refusal to give the author’s name, he was seized, carried to the
clubhouse, bullied, and finally warned out of town and county. He at
once went to the Assembly at Annapolis and demanded protection,
which was given him. He ventilated his wrongs in a pamphlet, and
was again mobbed and insulted. In 1779, Anna Goddard printed
anonymously in her paper Queries Political and Military, written
really by General Charles Lee, the enemy and at one time
presumptive rival of Washington. This paper also raised a
tremendous storm through which the Goddards passed triumphantly.
Lee remained always a close friend of William Goddard, and
bequeathed to him his valuable and interesting papers, with the
intent of posthumous publication; but, unfortunately, they were sent
to England to be printed in handsome style, and were instead
imperfectly and incompletely issued, and William Goddard received
no benefit or profit from their sale. But Lee left him also, by will, a
large and valuable estate in Berkeley County, Virginia, so he retired
from public life and ended his days on a Rhode Island farm. Anna
Katharine Goddard lived to great old age. The story of this
acquaintance with General Lee, and of Miss Goddard’s connection
therewith, forms one of the interesting minor episodes of the War.
Just previous to the Revolution, it was nothing very novel or
unusual to Baltimoreans to see a woman edit a newspaper. The
Maryland Gazette suspended on account of the Stamp Act in 1765,
and the printer issued a paper called The Apparition of the Maryland
Gazette which is not Dead but Sleepeth; and instead of a Stamp it
bore a death’s head with the motto, “The Times are Dismal, Doleful,
Dolorous, Dollarless.” Almost immediately after it resumed
publication, the publisher died, and from 1767 to 1775 it was carried
on by his widow, Anne Katharine Green, sometimes assisted by her
son, but for five years alone. The firm name was Anne Katharine
Green & Son: and she also did the printing for the Colony. She was
about thirty-six years old when she assumed the business, and was
then the mother of six sons and eight daughters. Her husband was
the fourth generation from Samuel Green, the first printer in New
England, from whom descended about thirty ante-Revolutionary
printers. Until the Revolution there was always a Printer Green in
Boston. Mr. Green’s partner, William Rind, removed to Williamsburg
and printed there the Virginia Gazette. At his death, widow
Clementina Rind, not to be outdone by Widow Green and Mother
and Sister Goddard, proved that what woman has done woman can
do, by carrying on the business and printing the Gazette till her own
death in 1775.
It is indeed a curious circumstance that, on the eve of the
Revolution, so many southern newspapers should be conducted by
women. Long ere that, from 1738 to 1740, Elizabeth Timothy, a
Charleston woman, widow of Louis Timothy, the first librarian of the
Philadelphia Library company, and publisher of the South Carolina
Gazette, carried on that paper after her husband’s death; and her
son, Peter Timothy, succeeded her. In 1780 his paper was
suspended, through his capture by the British. He was exchanged,
and was lost at sea with two daughters and a grandchild, while on
his way to Antigua to obtain funds. He had a varied and interesting
life, was a friend of Parson Whitefield, and was tried with him on a
charge of libel against the South Carolina ministers. In 1782 his
widow, Anne Timothy, revived the Gazette, as had her mother-in-law
before her, and published it successfully twice a week for ten years
till her death in 1792. She had a large printing-house, corner of
Broad and King Streets, Charleston, and was printer to the State;
truly a remarkable woman.
Peter Timothy’s sister Mary married Charles Crouch, who also was
drowned when on a vessel bound to New York. He was a sound
Whig and set up a paper in opposition to the Stamp Act, called The
South Carolina Gazette and Country Journal. This was one of the
four papers which were all entitled Gazettes in order to secure
certain advertisements that were all directed by law “to be inserted in
the South Carolina Gazette.” Mary Timothy Crouch continued the
paper for a short time after her husband’s death; and in 1780 shortly
before the surrender of the city to the British, went with her printing-
press and types to Salem, where for a few months she printed The
Salem Gazette and General Advertiser. I have dwelt at some length
on the activity and enterprise of these Southern women, because it
is another popular but unstable notion that the women of the North
were far more energetic and capable than their Southern sisters;
which is certainly not the case in this line of business affairs.
Benjamin and James Franklin were not the only members of the
Franklin family who were capable newspaper-folk. James Franklin
died in Newport in 1735, and his widow Anne successfully carried on
the business for many years. She had efficient aid in her two
daughters, who were quick and capable practical workers at the
compositor’s case, having been taught by their father, whom they
assisted in his lifetime. Isaiah Thomas says of them:—
A gentleman who was acquainted with Anne Franklin and
her family, informed me that he had often seen her daughters
at work in the printing house, and that they were sensible and
amiable women.
We can well believe that, since they had Franklin and Anne
Franklin blood in them. This competent and industrious trio of
women not only published the Newport Mercury, but were printers
for the colony, supplying blanks for public offices, publishing
pamphlets, etc. In 1745 they printed for the Government an edition of
the laws of the colony of 340 pages, folio. Still further, they carried on
a business of “printing linens, calicoes, silks, &c., in figures, very
lively and durable colors, and without the offensive smell which
commonly attends linen-printing.” Surely there was no lack of
business ability on the distaff side of the Franklin house.
Boston women gave much assistance to their printer-husbands.
Ezekiel Russel, the editor of that purely political publication, The
Censor, was in addition a printer of chap-books and ballads which
were sold from his stand near the Liberty Tree on Boston Common.
His wife not only helped him in printing these, but she and another
young woman of his household, having ready pens and a biddable
muse, wrote with celerity popular and seasonable ballads on passing
events, especially of tragic or funereal cast; and when these ballads
were printed with a nice border of woodcuts of coffins and death’s
heads, they often had a long and profitable run of popularity. After
his death, Widow Russel still continued ballad making and monging.
It was given to a woman, Widow Margaret Draper, to publish the
only newspaper which was issued in Boston during the siege, the
Massachusetts Gazette and Boston News Letter. And a miserable
little sheet it was, vari-colored, vari-typed, vari-sized; of such poor
print that it is scarcely readable. When the British left Boston,
Margaret Draper left also, and resided in England, where she
received a pension from the British government.
The first newspaper in Pennsylvania was entitled The American
Weekly Mercury. It was “imprinted by Andrew Bradford” in 1719. He
was a son of the first newspaper printer in New York, William
Bradford, Franklin’s “cunning old fox,” who lived to be ninety-two
years old, and whose quaint tombstone may be seen in Trinity
Churchyard. At Andrew’s death in 1742, the paper appeared in
mourning, and it was announced that it would be published by “the
widow Bradford.” She took in a partner, but speedily dropped him,
and carried it on in her own name till 1746. During the time that
Cornelia Bradford printed this paper it was remarkable for its good
type and neatness.
The Connecticut Courant and The Centinel were both of them
published for some years by the widows of former proprietors.
The story of John Peter Zenger, the publisher of The New York
Weekly Journal, is one of the most interesting episodes in our
progress to free speech and liberty, but cannot be dwelt on here. The
feminine portion of his family was of assistance to him. His daughter
was mistress of a famous New York tavern that saw many
remarkable visitors, and heard much of the remarkable talk of
Zenger’s friends. After his death in 1746, his newspaper was carried
on by his widow for two years. Her imprint was, “New York; Printed
by the Widow Cathrine Zenger at the Printing-Office in Stone Street;
Where Advertisements are taken in, and all Persons may be
supplied with this Paper.”
The whole number of newspapers printed before the Revolution
was not very large; and when we see how readily and successfully
this considerable number of women assumed the cares of
publishing, we know that the “newspaper woman” of that day was no
rare or presumptuous creature, any more than is the “newspaper-
woman” of our own day, albeit she was of very different ilk; but the
spirit of independent self-reliance, when it became necessary to
exhibit self-reliance, was as prompt and as stable in the feminine
breast a century and a half ago as now. Then, as to-day, there were
doubtless scores of good wives and daughters who materially
assisted their husbands in their printing-shops, and whose work will
never be known.
There is no doubt that our great-grandmothers possessed
wonderful ability to manage their own affairs, when it became
necessary to do so, even in extended commercial operations. It is
easy to trace in the New England coast towns one influence which
tended to interest them, and make them capable of business
transactions. They constantly heard on all sides the discussion of
foreign trade, and were even encouraged to enter into the discussion
and the traffic. They heard the Windward Islands, the Isle of France,
and Amsterdam, and Canton, and the coast of Africa described by
old travelled mariners, by active young shipmasters, in a way that
put them far more in touch with these far-away foreign shores, gave
them more knowledge of details of life in those lands, than women of
to-day have. And women were encouraged, even urged, to take an
active share in foreign trade, in commercial speculation, by sending
out a “venture” whenever a vessel put out to sea, and whenever the
small accumulation of money earned by braiding straw, knitting
stockings, selling eggs or butter, or by spinning and weaving, was
large enough to be worth thus investing; and it needed not to be a
very large sum to be deemed proper for investment. When a ship
sailed out to China with cargo of ginseng, the ship’s owner did not
own all the solid specie in the hold—the specie that was to be
invested in the rich and luxurious products of far Cathay.
Complicated must have been the accounts of these transactions, for
many were the parties in the speculation. There were no giant
monopolies in those days. The kindly ship-owner permitted even his
humblest neighbor to share his profits. And the profits often were
large. The stories of some of the voyages, the adventures of the
business contracts, read like a fairy tale of commerce. In old letters
may be found reference to many of the ventures sent by women.
One young woman wrote in 1759:—
Inclos’d is a pair of Earrings. Pleas ask Captin Oliver to
carry them a Ventur fer me if he Thinks they will fetch
anything to the Vally of them; tell him he may bring the effects
in anything he thinks will answer best.
One of the “effects” brought to this young woman, and to hundreds
of others, was a certain acquaintance with business transactions, a
familiarity with the methods of trade. When the father or husband
died, the woman could, if necessary, carry on his business to a
successful winding-up, or continue it in the future. Of the latter
enterprise many illustrations might be given. In the autumn of 1744 a
large number of prominent business men in Newport went into a
storehouse on a wharf to examine the outfit of a large privateer. A
terrible explosion of gunpowder took place, which killed nine of them.
One of the wounded was Sueton Grant, a Scotchman, who had
come to America in 1725. His wife, on hearing of the accident, ran at
once to the dock, took in at a glance the shocking scene and its
demands for assistance, and cutting into strips her linen apron with
the housewife’s scissors she wore at her side, calmly bound up the
wounds of her dying husband. Mr. Grant was at this time engaged in
active business; he had agencies in Europe, and many privateers
afloat. Mrs. Grant took upon her shoulders these great
responsibilities, and successfully carried them on for many years,
while she educated her children, and cared for her home.
A good example of her force of character was once shown in a
court of law. She had an important litigation on hand and large
interests at stake, when she discovered the duplicity of her counsel,
and her consequent danger. She went at once to the court-room
where the case was being tried; when her lawyer promptly but vainly
urged her to retire. The judge, disturbed by the interruption, asked
for an explanation, and Mrs. Grant at once unfolded the knavery of
her counsel and asked permission to argue her own case. Her
dignity, force, and lucidity so moved the judge that he permitted her
to address the jury, which she did in so convincing a manner as to
cause them to promptly render a verdict favorable to her. She
passed through some trying scenes at the time of the Revolution
with wonderful decision and ability, and received from every one the
respect and deference due to a thorough business man, though she
was a woman.
In New York the feminine Dutch blood showed equal capacity in
business matters; and it is said that the management of considerable
estates and affairs often was assumed by widows in New
Amsterdam. Two noted examples are Widow De Vries and Widow
Provoost. The former was married in 1659, to Rudolphus De Vries,
and after his death she carried on his Dutch trade—not only buying
and selling foreign goods, but going repeatedly to Holland in the
position of supercargo on her own ships. She married Frederick
Phillipse, and it was through her keenness and thrift and her
profitable business, as well as through his own success, that
Phillipse became the richest man in the colony and acquired the
largest West Indian trade.
Widow Maria Provoost was equally successful at the beginning of
the eighteenth century, and had a vast Dutch business
correspondence. Scarce a ship from Spain, the Mediterranean, or
the West Indies, but brought her large consignments of goods. She
too married a second time, and as Madam James Alexander filled a
most dignified position in New York, being the only person besides
the Governor to own a two-horse coach. Her house was the finest in
town, and such descriptions of its various apartments as “the great
drawing-room, the lesser drawing-room, the blue and gold leather
room, the green and gold leather room, the chintz room, the great
tapestry room, the little front parlour, the back parlour,” show its size
and pretensions.
Madam Martha Smith, widow of Colonel William Smith of St.
George’s Manor, Long Island, was a woman of affairs in another
field. In an interesting memorandum left by her we read:—
Jan ye 16, 1707. My company killed a yearling whale made
27 barrels. Feb ye 4, Indian Harry with his boat struck a whale
and called for my boat to help him. I had but a third which was
4 barrels. Feb 22, my two boats & my sons and Floyds boats
killed a yearling whale of which I had half—made 36 barrels,
my share 18 barrels. Feb 24 my company killed a school
whale which made 35 barrels. March 13, my company killed a
small yearling made 30 barrels. March 17, my company killed
two yearlings in one day; one made 27, the other 14 barrels.
We find her paying to Lord Cornbury fifteen pounds, a duty on “ye
20th part of her eyle.” And she apparently succeeded in her
enterprises.
In early Philadelphia directories may be found the name of
“Margaret Duncan, Merchant, No. 1 S. Water St.” This capable
woman had been shipwrecked on her way to the new world. In the
direst hour of that extremity, when forced to draw lots for the scant
supply of food, she vowed to build a church in her new home if her
life should be spared. The “Vow Church” in Philadelphia, on
Thirteenth Street near Market Street, for many years proved her
fulfilment of this vow, and also bore tribute to the prosperity of this
pious Scotch Presbyterian in her adopted home.
Southern women were not outstripped by the business women of
the north. No more practical woman ever lived in America than Eliza
Lucas Pinckney. When a young girl she resided on a plantation at
Wappoo, South Carolina, owned by her father, George Lucas. He
was Governor of Antigua, and observing her fondness for and
knowledge of botany, and her intelligent power of application of her
knowledge, he sent to her many tropical seeds and plants for her
amusement and experiment in her garden. Among the seeds were
some of indigo, which she became convinced could be profitably
grown in South Carolina. She at once determined to experiment, and
planted indigo seed in March, 1741. The young plants started finely,
but were cut down by an unusual frost. She planted seed a second
time, in April, and these young indigo-plants were destroyed by
worms. Notwithstanding these discouragements, she tried a third
time, and with success. Her father was delighted with her enterprise
and persistence, and when he learned that the indigo had seeded
and ripened, sent an Englishman named Cromwell—an experienced
indigo-worker—from Montserrat to teach his daughter Eliza the
whole process of extracting the dye from the weed. Vats were built
on Wappoo Creek, in which was made the first indigo formed in
Carolina. It was of indifferent quality, for Cromwell feared the
successful establishment of the industry in America would injure the
indigo trade in his own colony, so he made a mystery of the process,
and put too much lime in the vats, doubtless thinking he could
impose upon a woman. But Miss Lucas watched him carefully, and in
spite of his duplicity, and doubtless with considerable womanly
power of guessing, finally obtained a successful knowledge and
application of the complex and annoying methods of extracting
indigo,—methods which required the untiring attention of sleepless
nights, and more “judgment” than intricate culinary triumphs. After
the indigo was thoroughly formed by steeping, beating, and washing,
and taken from the vats, the trials of the maker were not over. It must
be exposed to the sun, but if exposed too much it would be burnt, if
too little it would rot. Myriads of flies collected around it and if
unmolested would quickly ruin it. If packed too soon it would sweat
and disintegrate. So, from the first moment the tender plant
appeared above ground, when the vast clouds of destroying
grasshoppers had to be annihilated by flocks of hungry chickens, or
carefully dislodged by watchful human care, indigo culture and
manufacture was a distressing worry, and was made still more
unalluring to a feminine experimenter by the fact that during the
weary weeks it laid in the “steepers” and “beaters” it gave forth a
most villainously offensive smell.
Soon after Eliza Lucas’ hard-earned success she married Charles
Pinckney, and it is pleasant to know that her father gave her, as part
of her wedding gift, all the indigo on the plantation. She saved the
whole crop for seed,—and it takes about a bushel of indigo seed to
plant four acres,—and she planted the Pinckney plantation at
Ashepoo, and gave to her friends and neighbors small quantities of
seed for individual experiment; all of which proved successful. The
culture of indigo at once became universal, the newspapers were full
of instructions upon the subject, and the dye was exported to
England by 1747, in such quantity that merchants trading in Carolina
petitioned Parliament for a bounty on Carolina indigo. An act of
Parliament was passed allowing a bounty of sixpence a pound on
indigo raised in the British-American plantations and imported
directly to Great Britain. Spurred on by this wise act, the planters
applied with redoubled vigor to the production of the article, and
soon received vast profits as the rewards of their labor and care. It is
said that just previous to the Revolution more children were sent
from South Carolina to England to receive educations, than from all
the other colonies,—and this through the profits of indigo and rice.
Many indigo planters doubled their capital every three or four years,
and at last not only England was supplied with indigo from South
Carolina, but the Americans undersold the French in many European
markets. It exceeded all other southern industries in importance, and
became a general medium of exchange. When General Marion’s
young nephew was sent to school at Philadelphia, he started off with
a wagon-load of indigo to pay his expenses. The annual dues of the
Winyah Indigo Society of Georgetown were paid in the dye, and the
society had grown so wealthy in 1753, that it established a large
charity school and valuable library.
Ramsay, the historian of South Carolina, wrote in 1808, that the
indigo trade proved more beneficial to Carolina than the mines of
Mexico or Peru to old or new Spain. By the year of his writing,
however, indigo (without waiting for extermination through its modern
though less reliable rivals, the aniline dyes) had been driven out of
Southern plantations by its more useful and profitable field neighbor,
King Cotton, that had been set on a throne by the invention of a
Yankee schoolmaster. The time of greatest production and export of
indigo was just previous to the Revolution, and at one time it was
worth four or five dollars a pound. And to-day only the scanty records
of the indigo trade, a few rotting cypress boards of the steeping-vats,
and the blue-green leaves of the wild wayside indigo, remain of all
this prosperity to show the great industry founded by this remarkable
and intelligent woman.
The rearing of indigo was not this young girl’s only industry. I will
quote from various letters written by her in 1741 and 1742 before her
marriage, to show her many duties, her intelligence, her versatility:—
Wrote my father on the pains I had taken to bring the
Indigo, Ginger, Cotton, Lucern, and Casada to perfection and
had greater hopes from the Indigo, if I could have the seed
earlier, than any of ye rest of ye things I had tried.
I have the burthen of 3 Plantations to transact which
requires much writing and more business and fatigue of other
sorts than you can imagine. But lest you should imagine it too
burthensome to a girl in my early time of life, give me leave to
assure you I think myself happy that I can be useful to so
good a father.
Wont you laugh at me if I tell you I am so busy in providing
for Posterity I hardly allow myself time to eat or sleep, and
can but just snatch a moment to write to you and a friend or
two more. I am making a large plantation of oaks which I look
upon as my own property whether my father gives me the
land or not, and therefore I design many yeer hence when
oaks are more valuable than they are now, which you know
they will be when we come to build fleets. I intend I say two
thirds of the produce of my oaks for a charity (Ill tell you my
scheme another time) and the other third for those that shall
have the trouble to put my design in execution.
I have a sister to instruct, and a parcel of little negroes
whom I have undertaken to teach to read.
The Cotton, Guinea Corn, and Ginger planted was cutt off
by a frost. I wrote you in a former letter we had a good crop of
Indigo upon the ground. I make no doubt this will prove a
valuable commodity in time. Sent Gov. Thomas daughter a
tea chest of my own doing.
I am engaged with the Rudiments of Law to which I am but
a stranger. If you will not laugh too immoderately at me I’ll
trust you with a Secrett. I have made two Wills already. I know
I have done no harm for I conn’d my Lesson perfect. A widow
hereabouts with a pretty little fortune teazed me intolerably to
draw a marriage settlement, but it was out of my depth and I
absolutely refused it—so she got an able hand to do it—
indeed she could afford it—but I could not get off being one of
the Trustees to her settlement, and an old Gentⁿ the other. I
shall begin to think myself an old woman before I am a young
one, having such mighty affairs on my hands.
I think this record of important work could scarce be equalled by
any young girl in a comparative station of life nowadays. And when
we consider the trying circumstances, the difficult conditions, in
which these varied enterprises were carried on, we can well be
amazed at the story.
Indigo was not the only important staple which attracted Mrs.
Pinckney’s attention, and the manufacture of which she made a
success. In 1755 she carried with her to England enough rich silk
fabric, which she had raised and spun and woven herself in the
vicinity of Charleston, to make three fine silk gowns, one of which
was presented to the Princess Dowager of Wales, and another to
Lord Chesterfield. This silk was said to be equal in beauty to any silk
ever imported.
This was not the first American silk that had graced the person of
English royalty. In 1734 the first windings of Georgia silk had been
taken from the filature to England, and the queen wore a dress made
thereof at the king’s next birthday. Still earlier in the field Virginia had
sent its silken tribute to royalty. In the college library at Williamsburg,
Va., may be seen a letter signed “Charles R.”—his most Gracious
Majesty Charles the Second. It was written by his Majesty’s private
secretary, and addressed to Governor Berkeley for the king’s loyal
subjects in Virginia. It reads thus:—
Trusty and Well beloved, We Greet you Well. Wee have
received wᵗʰ much content ye dutifull respects of Our Colony
in ye present lately made us by you & ye councill there, of ye
first product of ye new Manufacture of Silke, which as a
marke of Our Princely acceptation of yoʳ duteys & for yoʳ
particular encouragement, etc. Wee have been commanded
to be wrought up for ye use of Our Owne Person.
And earliest of all is the tradition, dear to the hearts of Virginians,
that Charles I. was crowned in 1625 in a robe woven of Virginia silk.
The Queen of George III. was the last English royalty to be similarly
honored, for the next attack of the silk fever produced a suit for an
American ruler, George Washington.
The culture of silk in America was an industry calculated to attract
the attention of women, and indeed was suited to them, but men
were not exempt from the fever; and the history of the manifold and
undaunted efforts of governor’s councils, parliaments, noblemen,
philosophers, and kings to force silk culture in America forms one of
the most curious examples extant of persistent and futile efforts to
run counter to positive economic conditions, for certainly physical
conditions are fairly favorable.
South Carolina women devoted themselves with much success to
agricultural experiments. Henry Laurens brought from Italy and
naturalized the olive-tree, and his daughter, Martha Laurens
Ramsay, experimented with the preservation of the fruit until her
productions equalled the imported olives. Catharine Laurens
Ramsay manufactured opium of the first quality. In 1755 Henry
Laurens’ garden in Ansonborough was enriched with every curious
vegetable product from remote quarters of the world that his
extensive mercantile connections enabled him to procure, and the
soil and climate of South Carolina to cherish. He introduced besides
olives, capers, limes, ginger, guinea grass, Alpine strawberries
(bearing nine months in the year), and many choice varieties of
fruits. This garden was superintended by his wife, Mrs. Elinor
Laurens.
Mrs. Martha Logan was a famous botanist and florist. She was
born in 1702, and was the daughter of Robert Daniel, one of the last
proprietary governors of South Carolina. When fourteen years old,
she married George Logan, and all her life treasured a beautiful and
remarkable garden. When seventy years old, she compiled from her
knowledge and experience a regular treatise on gardening, which
was published after her death, with the title The Garden’s Kalendar.
It was for many years the standard work on gardening in that locality.
Mrs. Hopton and Mrs. Lamboll were early and assiduous flower-
raisers and experimenters in the eighteenth century, and Miss Maria
Drayton, of Drayton Hall, a skilled botanist.
The most distinguished female botanist of colonial days was Jane
Colden, the daughter of Governor Cadwallader Colden, of New York.
Her love of the science was inherited from her father, the friend and
correspondent of Linnæus, Collinson, and other botanists. She
learned a method of taking leaf-impressions in printers’ ink, and sent
careful impressions of American plants and leaves to the European
collectors. John Ellis wrote of her to Linnæus in April, 1758:—
This young lady merits your esteem, and does honor to
your system. She has drawn and described four hundred
plants in your method. Her father has a plant called after her
Coldenia. Suppose you should call this new genus Coldenella
or any other name which might distinguish her.
Peter Collinson said also that she was the first lady to study the
Linnæan system, and deserved to be celebrated. Another tribute to
her may be found in a letter of Walter Rutherford’s:—
From the middle of the Woods this Family corresponds with
all the learned Societies in Europe. His daughter Jenny is a
Florist and Botanist. She has discovered a great number of
Plants never before described and has given their Properties
and Virtues, many of which are found useful in Medicine and
she draws and colours them with great Beauty. Dr. Whyte of
Edinburgh is in the number of her correspondents.
N. B. She makes the best cheese I ever ate in America.
The homely virtue of being a good cheese-maker was truly a
saving clause to palliate and excuse so much feminine scientific
knowledge.
CHAPTER III.
“DOUBLE-TONGUED AND NAUGHTY WOMEN.”