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Maeck 2000
Maeck 2000
Maeck 2000
SHORT REPORT
Lienhard Maeck, 1 Detlef Haase, 1 Claudia Schoch, 2 Wolfgang Hiddemann 2 and Frauke Alves 1 1 Department
of Haematology and Oncology, Georg-August-University, GoÈttingen, Germany, and 2 Department of Internal Medicine III,
University Hospital Grosshadern, Ludwig-Maximilians-University, MuÈnchen, Germany
Summary. Using a polymerase chain reaction (PCR)- coincidence of LOH, MSI and chromosome abnormalities
based approach, we examined the prevalence of loss of was observed (P , 0´025). Moreover, our data suggest that
heterozygosity (LOH) and microsatellite instability (MSI) in LOH represents an initial rather than a secondary genetic
relation to chromosomal imbalances in myelodysplastic event in MDS, promoting genetic instability in a subset of
syndrome (MDS). Two of 26 patients displayed MSI (8%), patients.
one of them at five loci. LOH was detected in six out of 26
cases (23%), predominantly involving markers IRF1 [5q31] Keywords: myelodysplastic syndrome, microsatellite
and WT1 [11p]. Two patients displayed a corresponding instability, loss of heterozygosity, interferon regulatory
chromosomal deletion by conventional cytogenetics. Sup- factor 1, cytogenetics.
porting the mutator phenotype hypothesis, a significant
The initial genetic event of the presumed multistep malignancies as the consequence of a defective DNA MMR
pathogenesis of myelodysplastic syndrome (MDS) is an machinery. MSI has also been observed in sporadic tumours
unknown submicroscopic stem cell defect, which, in a and distinct haematological disorders, suggesting that DNA
subset of cases, is followed by non-clonal karyotype proofreading failure may be a common pathomechanism in
instability (Haase et al, 1992). In approximately half of the neoplastic transformation.
patients, clonal karyotypic abnormalities, which are detect- To verify whether both mechanisms might be important
able at the stem cell level, occur (Haase et al, 1997). By at the onset of de novo MDS, bone marrow samples were
unravelling loss of heterozygosity (LOH) and microsatellite analysed for LOH and MSI using a panel of 18 microsatellite
instability (MSI), microsatellite polymorphic markers are repeats located on 15 different chromosomal arms. From
useful to test the status of DNA mismatch repair (MMR) and each patient, buccal smears were taken as a source for
cell cycle-conducting tumour-suppressor genes, both of constitutional DNA. The results of the microsatellite
which, if deficient, promote genetic instability (Loeb, 1998). analyses were related to corresponding cytogenetic data.
LOH describes the homozygous state of a distinct
chromosomal region and points to the presence of a closely
located inactivated tumour-suppressor gene that might be PATIENTS AND METHODS
involved in malignant transformation. MSI is defined by the Patients. Twenty three patients with de novo MDS, one
occurrence of novel microsatellite alleles in neoplastic DNA patient with therapy-related MDS (t-MDS) and two patients
when compared with DNA from non-malignant tissue of the with acute myeloid leukaemia secondary to MDS (sAML)
same individual. It is a hallmark of patients with hereditary secondary to MDS (sAML) were recruited for microsatellite
non-polyposis colorectal cancer (HNPCC) and related analyses (Table IA). Bone marrow samples and buccal
smears were collected after informed consent.
Correspondence: F. Alves, Department of Haematology and Cytogenetics. Chromosome analyses were performed using
Oncology, Georg-August-University, Robert-Koch-Str. 40, 37075 a modified GAG-banding technique after short-term cultures
GoÈttingen, Germany. E-mail: falves@gwdg.de of bone marrow samples as described previously (Stollmann
Short Report
26 F 56 RARS 46,XX [25]
FAB, French±American±British classification; RA, refractory anaemia; RARS, refractory anaemia with ring sideroblasts; RAEB, refractory anaemia with excess blasts; CMML. chronic
myelomonocytic leukaemia; RAEB-T, refractory anaemia with excess blasts in transformation; t-RAEB, therapy-related refractory anaemia with excess blasts; sAML, acute myeloid leukaemia
secondary to myelodysplastic syndrome.
843
844 Short Report
Table IB. Loci and primers.
et al, 1985). Chromosomes were classified according to the (Griffais et al, 1991). The forward primer was designed from
1995 International System for Human Cytogenetic Nomen- the IRF1 genomic DNA sequence (exon 8).
clature. The term sporadic chromosomal alterations is used Aliquots of amplified DNA were mixed with 5 ml of
in cases with unequivocal chromosome and/or chromatid formamide dye solution, heated to 968C for 5 min and then
breaks occurring in at least two metaphases, as well as in chilled on ice before being subjected to electrophoresis on a
cases with sporadic deletions, translocations and inversions 10% polyacrylamide standard denaturing sequencing gel
occurring in only one metaphase. (National Diagnostics, Atlanta, GA, USA). The gels were
DNA isolation. Genomic DNA from bone marrow samples silver-stained using standard procedures.
and buccal smears was isolated by ethanol precipitation Genescan analysis. Analysis was performed according to
following proteinase K digestion using the QIAmp Blood Kit the Genescan 500 TAMRA protocol (ABI, Weiterstadt,
(Qiagen, Hilden, Germany). Germany), using the manufacturer's analysis program
Polymerase chain reaction (PCR). Primer sequences and (ABI).
chromosomal locations of the corresponding microsatellites
are given in Table IB. Primer pairs were synthesized using
RESULTS
an Expedite Model 8009 DNA/RNA synthesizer (Perceptive
Biosystems, Wiesbaden, Germany). Amplifying a GT repeat The results of the microsatellite analyses are summarized in
inside the seventh intron of the IRF1 gene, we introduced a Table IA. Six patients showed LOH (23%) and two patients
new primer pair which was designed according to the displayed MSI (8%). Five of them had advanced stage MDS
octamer frequency disparity method as described previously and one patient had sAML. Case 7, classified as refractory
DISCUSSION
A disease-inherent genetic instability is supposed to be the
basis for an accumulation of somatic mutations in MDS
(Haase et al, 1992; Jacobs, 1992). In the present study,
analysing 18 microsatellite repeats located on 15 chromo-
somal arms, LOH was detected in bone marrow DNA from
six patients (23%), whereas two further patients displayed
MSI (8%). One of the latter, classified as RAEB (patient 7),
showed MSI at 5 of 17 informative loci (29%). It is therefore
tempting to suggest that a malfunctioning DNA MMR
machinery might have contributed to the pathogenesis of
MDS in this case.
Previous reports on colorectal cancer determined a
negative correlation between the occurrence of MSI and
other genetic events (Ionov et al, 1993) and suggested MSI
of marker BAT-26 to be a reliable indicator of a replication
error phenotype (Hoang et al, 1997). In our study, MSI and
LOH were associated with clonal karyotypic abnormalities
or sporadic chromosomal alterations, respectively, and none
Fig. 1. (A) MSI detected in patient 7 (RAEB). bm, amplified bone
of our patients presented with alterations of marker BAT-26.
marrow DNA; buc, amplified DNA from corresponding buccal
mucosa. The examined loci and their chromosomal locations are
Although DNA MMR deficiency might be involved in a
designated at the bottom of each paired sample. Allelic gain in bone subset of patients with MDS, different pathogenetic path-
marrow DNA is demonstrated by arrows. (B) Four patients ways seem to be responsible for genetic instability in
displaying LOH at the IRF1 locus. bm, bone marrow DNA; buc, colorectal cancer. This might also explain the considerably
corresponding DNA from buccal epithelium. In contrast to patients higher prevalence of unstable markers in HNPCC (, 40%)
16, 18, and 20, patient 9 displayed loss of the shorter allele in comparison with MDS.
(arrows). (C) Electropherogram showing amplification products of LOH was more frequently detected than MSI, mainly
the IRF1 primers in patient 20. (a) A normal heterozygous signal involving loci IRF1 and WT1. After introducing a new primer
amplified from buccal mucosa; (b) the corresponding bone marrow pair amplifying a GT repeat inside the IRF1 gene, LOH was
sample which exhibits loss of the longer allele. The x-axis shows
detected in four patients. Two of the patients displayed a
fragment sizes in base pairs (bp), the y-axis shows peak height
values. The shorter allele is 248 bp and the longer allele 256 bp
corresponding loss of chromosome band 5q31, representing
long. the minimal commonly deleted region (Le Beau et al, 1993).
Our results underline the possible significance of IRF1 gene
loss in MDS, perhaps as one initial step during pathogenesis.
anaemia with excess blasts (RAEB), showed MSI for five They might also reflect a disease-inherent genetic instability
markers (LPL [8p], D10S197 [10qter], D12S89 [12p], RB1 in the 5q31 region, where IRF1 might not be directly involved
[13q] and DCC [18q]; Fig 1A) and patient 19, who exhibited but is located in the vicinity of another presumed tumour-
chronic myelomonocytic leukaemia (CMML), displayed MSI suppressor gene. Using a primer pair amplifying a CA repeat in
for marker D12S89. Four patients showed LOH at locus the 3 0 untranslated region of the WT1 gene, LOH was detected
IRF1, two at locus WT1 and one patient displayed allelic loss in two patients, one with therapy-related refractory anaemia
for TP53. To verify the relatively high prevalence of LOH at with excess blasts (t-RAEB), which transformed into AML
the IRF1 locus (Fig 1B), bone marrow DNA from patient 20 later on, and one with refractory anaemia with excess blasts
was submitted to a Genescan analysis. By means of this in transformation (RAEB-T). Mutations in the WT1 gene have
additional method, loss of the longer allele (256 bp) in the been reported to occur in 15% of cases of AML and were
bone marrow DNA could be confirmed (Fig 1Ca and b). associated with a poor response to chemotherapy (King-
Underwood et al, 1996). Similarly, allelic loss of WT1 might be
Correlation of karyotype and microsatellite analysis predictive for a poor clinical prognosis in MDS. In view of the
Patients with a normal karyotype showed neither LOH nor predominant localization of LOH at only two loci (IRF1 and