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1 s2.0 S2352914820300381 Mainext
1 s2.0 S2352914820300381 Mainext
A R T I C L E I N F O A B S T R A C T
Keywords: Background: Several studies suggest that the outcome of pediatric cardiopul-monary resuscitation depends
Electrocardiography strongly on timely recognition of the underlying cause for cardiac arrest, the prominent ones being primary
Wavelet transform ventricular fibril-lation and secondary asphyxia-associated ventricular fibrillation. If the cause could be deter
Support vector machine
mined within the first minute of cardiopulmonary resuscitation, the administration could be appropriately
Cardiac arrest
Cardiopulmonary resuscitation
modified in order to achieve optimal outcome. However, distinguishing the two causes has been a difficult
Ventricular fibrillation challenge.
Asphyxia Objective: To derive a robust algorithm with acceptable accuracy that distinguishes primary ventricular fibril
lation and secondary asphyxia-associated ventricular fibrillation within the first minute of starting cardiopul
monary resus-citation.
Methods: We address this problem with MACWAVE, a new computa-tional technique integrating advanced signal
processing and machine learning. MACWAVE is an algorithm that uses wavelet transforms with electrocardiog-
raphy data to identify the most differentiating characteristics of the signal and uses them as features to develop a
support vector machine classification model.
Results: The developed algorithm shows an average classification accuracy of 85%, this being the first result ever
achieved for this critical pediatric problem.
Conclusion: Being the first research effort to ever analyze this critical pediatric problem, the MACWAVE method
can improve patient-centric cardiopulmonary resuscitation treatment and significantly increase positive out
comes for pediatric cardiac arrest.
1. Introduction Multiple studies suggest that oftentimes the main reason for an
adverse outcome in pediatric CPR is the unknown pathogenesis of CA in
While it is difficult to determine the exact numbers, cardiac arrest children [4,7,11,15]. Ventricular fibrillation (VF), characterized as
(CA), also known as sudden cardiac arrest (SCA), accounts for millions of rapid, disorganized contractions of the heart with complex electrocar
deaths every year globally, and over 300,000 in the United States alone diogram (ECG) is uncommon, but not rare during out-of-hospital pedi
[1–4]. An estimated number of 200,000 patients per year receive atric cardiac arrests’ [9,16]. In fact, it is reportedly the initial rhythm in
in-hospital cardiopulmonary resus-citation (IH-CPR) [5–8]. More 19%–24% of such cardiac arrest cases [4,17]. In adults, when prompt
detailed reports point out that 59% of adults and 93% of children have defibrillation is provided soon after onset of VF, the attained outcomes
their in-hospital cardiac arrest in ICUs or PI- CUs [7,9–11]. However, tend to be positive. For example, in a cardiac catheteriza-tion labora
despite highly equipped medical environment and continuous upgrades tory, the rates of survival have been reported to approach 100% [4].
of the CPR guidelines and standards, frequently issued by the American “When automated external defibrillators are used within 3 min of wit
Heart Association (AHA), only 25% of adults and 50% of children sur nessed VF in casinos, long-term survival has been shown to be 75%” [4].
vive to hospital discharge after receiving IH-CPR [1,6,7,11–14]. However, most pediatric cardiac arrests occur in critically ill children
* Corresponding author.
E-mail address: dbender2@villanova.edu (D. Bender).
URL: http://www.vcads.org (D. Bender).
https://doi.org/10.1016/j.imu.2020.100339
Received 23 January 2020; Received in revised form 20 April 2020; Accepted 29 April 2020
Available online 18 May 2020
2352-9148/Published by Elsevier Ltd. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
D. Bender et al. Informatics in Medicine Unlocked 19 (2020) 100339
with underlying respiratory failure or circulatory shock and are gener 22–24]. Hence, the chief goal of our study is to derive a classification
ally preceded by asphyxia [18,19]. algorithm for distinguishing primary VF and secondary
Treatment of choice is prompt CPR through chest compressions and asphyxia-associated VF at the beginning of intervention, in order to
initial assisted ventilation, providing adequate oxygen delivery to meet improve patient-centric CPR procedures.
metabolic de-mand and removal of carbon dioxide [4]. As a result, the Computational intelligence (CI) techniques have helped to address
ECG examination for primary VF or subsequently developed secondary many biomedical problems. Many such problems can be characterized
asphyxia-associated VF is underemphasized [4,20,21]. In many cases, as pattern recognition or classification tasks and are fit for a subfield of
the delayed recognition of VF and not delivering timely defibrillation to CI known as ma-chine learning (ML). Nowadays, there is widespread
restore shockable heart rhythm, is the cause for negative pediatric CPR belief that quantity of the data and high computational power drive the
outcome. Thus, an immediate recognition of the underlying cause for CA performance of the ML algorithms.
in children is crucial. It has been generally recognized that if the path when dealing with dynamic systems such as the one at hand. How
ological cause is determined within the first minute of CPR, more pos ever, we be-lieve and have shown in a preliminary version of this work
itive results can be achieved by performing an appropriately modified [25] that meticulous analysis and detection of significant but often
administration (i.e., CPR vs. medications vs. prompt defibrillation) [4,8, hidden characteristics in the raw data, while utilizing ML algorithms
2
D. Bender et al. Informatics in Medicine Unlocked 19 (2020) 100339
more in the form of computational tool, would be a more effective monitor: model HP66 (Hewlett Packard, Palo Alto, CA) and NICO
approach. Moreover, such an approach can lead to additional insight (Novametrix Medical Systems Inc., Wallingford, CT), re-spectively. The
into the underlying physiological mechanisms. This study, re-sulting in a PowerLab data acquisition system recorded the ECG and the EtCO2 data
new algorithm (MACWAVE), solidifies this claim and shows not just with their measured sampling frequency. The experimental proto-col,
accurate classification results, but also answers the question why such explained in more detail in Ref. [7,11], was approved by The Chil
accuracy was achieved, providing a basis for further improvement. dren’s Hospital of Philadelphia Institutional Animal Care and Use
Committee and the Univer-sity of Pennsylvania Institutional Animal
2. Methodology Care and Use Committee (IACUC). As described in Ref. [7,11], the
collected data is first of its kind, targeting specific resuscitation prob
2.1. Overview lems, including the one presented in this study.
Since the beginning of data-logging (tl) was at random times (Δt ¼ t0
The structure of an ML algorithm is typically portrayed by three main tl) before t0 as shown in Fig. 2 and considering that the main task of
prin-ciples: input data, learning algorithm and model. An overview this study was.
shown in Fig. 1 illustrates how, through a learning process, input data is to classify VF type promptly after its occurrence, the beginning of the
utilized to construct the correct model to carry out the defined task. injury period and resuscitation period, respectively, were identified
The raw data in our domain consists of ECG signals. The input data using a wavelet transform (WT) of the EtCO2 signal. The background of
can essentially be described here as characteristics, or as features, of the WT is provided in Appendix A; however, Fig. 2 illustrates this pre
signals that are mathematically mapped from the signal domain into the processing step graphically through transients shown in the WT plot
feature domain. The defined features drive the learning algorithm and with respect to the original EtCO2 signal, and highlights the detected
ultimately build the ML model; thus, the performance of the ML model is first 2 min of CPR. Using the identified time-interval, the correlated ECG
decided by the quality of the features, making the mathematical map signal from each sample was retained for further analysis. As was found
ping functions pivotal for the accuracy of any ML utilization. Nowadays, later, the first minute of the retained ECG was itself sufficient to conduct
advancement in computational intelligence further analysis; thus, the rest of the paper refers to only the first
field has made most of the ML algorithms somewhat ‘ready to use retained minute of the ECG signals as the raw or the original signal. It
products’, making the feature extraction process the limiting, and should be noted here that the goal of this investigation was to classify
therefore, the most critical step in the development of the ML algorithm. primary VF and secondary asphyxia-associated VF at the beginning of
This section describes a novel interdependent machine learning and the resuscitation. Thus, the only relevant ECG data for this study is
wavelet transform analysis, that was designed with particular focus i) to during the time-window at t7, directly following the injury period.
find the desired mapping function to identify unknown features, as well During the CPR-detection-step, it was found that some of the original
as ii) to optimize the feature extraction step of the developed MACWAVE signals were corrupt or had missing periods. Thus, the number of raw
(MAChine Learning With WAVelet Transforms) algorithm. data was reduced to 33 samples (20 primary VF and 13 asphyxia-
associated VF).
2.2. Data
2.3. Feature extraction and signal examination
The raw data was taken from 36 healthy 3-month-old domestic fe
male swine with two different ventricular fibrillation types induced Literature shows that wavelet transform has proven itself to be an
during the experiment. indis-pensable addition to the signal processing field. Moreover, it is
validated signal analysis tool of choice when it comes to examining ECG
- Group I: primary VF (n ¼ 20) and Group II: asphyxia-associated VF signals [27–29] and is a suitable technique to quantify desired charac
(n ¼ 16). teristics of the ECG signal, permitting to construct a decisive set of
features for ML applications [30,31]. Its principal ideas are briefly
In both groups, the animals were anesthetized and mechanically explained in Appendix A and its strong points are demonstrated through
ventilated using Datex Ohmeda anesthesia machine (Modulus SE) on a our analysis.
mixture of room air and titrated isoflurane (1.0–2.5%) with a tidal As shown through previous studies [29,32], WT provides extraor
volume of 10–12 ml/kg, positive-end expiratory pressure of 60 mm H2O, dinary in-sights regarding frequencies and their attributes often hidden
and titration of rate to sustain end-tidal carbon dioxide (EtCO2) at in the raw ECG signal with respect to their temporal locations. However,
38–42 mmHg [7,11]. The primary VF injury was simulated through the when dealing with ECG signals from groups both having pathological
induction of electrical pacing to the heart. Once VF was confirmed, the conditions, such as primary VF or asphyxia-associated VF, the well
animal was left untreated for 7 min. In the asphyxia-associated VF known and typical P-QRS-T sinus pat-tern is no longer present. For
group, the injury was fabricated by endotracheal tube clamping for 7 instance Fig. 3 shows VF ECG segments of both sample groups, with
min, at the end of which the VF was induced and confirmed. Fol-lowing imposed normal P-QRS-T waveform. In both sample groups, the signal
the injury period of 7 min, CPR was provided for both groups with a appears similarly sporadic and disordered, making conven-tionally
target rate of 100 chest compressions min 1 and ventilations at 6 min 1 established WT examinations of ECG signals infeasible for this problem.
with 100% oxygen. Due to the nature of original experiments [7,11], We began a coarse WT analysis of the ECG signals of the given
half of the animals from each group randomly received either blood waveforms in order to identify the relevant and general signal charac
pressure-targeted care (BP-care), consisting of compression depth teristics. Next, the observed results were analyzed using a more tailored
titrated to a target systolic blood pressure of 100 mmHg; or optimal WT analysis, in an in-terdependent ML combination, to ultimately
American Heart Association Guideline obtain the most relevant signal characteristics to refine the final classi
care (Guideline-care), consisting of target depth of 51 mm [26]. fication model.
However, no intravenous vasopressors were administered in BP-care nor As suggested by Addison in Ref. [27], a Morlet function, see Eq. (1),
the Guideline-care in the first 2 min of provided CPR. Thus, to eradicate was used as the mother wavelet with initial scales s ¼ [1–128] and a
potential impact on the data introduced through different CPR se wavelet transform was performed on the preprocessed 1-min-ECG-seg
quences after t9 ¼ 9 min, only the data obtained amid the initial 2 min of ments. Fig. 4 illustrates these steps graphically, showing the trans
the resuscitation period in the interval between t7 ¼ 7 min and t9 ¼ 9 min formation from the original ECG signal to the obtained WT coefficient
was selected for this study. The ECG and the EtCO2 data used in this spectrum W {f (1–128, μ)}. To quantify WT coefficient spectrum of the
study were measured with a sampling frequency of 100Hz with an ICU ECG segment as defined by Eq. (2), the energy E was calculated with
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D. Bender et al. Informatics in Medicine Unlocked 19 (2020) 100339
Fig. 2. a) Protocol design: tl start of data recording, t0 start of asphyxia or VF in-jury, t7 start of manual cardiopulmonary resuscitation, t9 titration is performed
differently for BP-Care and Guideline-Care VF samples. The experiment is conducted until Return of Spontaneous Circulation (ROSC) or t27 b) EtCO2 Signal c)
Wavelet transform of the EtCO2 signal to detect transients.
respect to s according to Eq. (3). Repeating the process for all 33 sam
1
ples, each of the original ECG signals was characterized interim in the
t2
ΨðtÞ ¼ 1 ejω0 t e 2 (1)
form of an energy metric. π4
4
D. Bender et al. Informatics in Medicine Unlocked 19 (2020) 100339
Fig. 3. Imposed normal ECG sinus rhythm on the ECG waveform of a) primary VF sample and b) secondary asphyxia-associated VF sample.
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D. Bender et al. Informatics in Medicine Unlocked 19 (2020) 100339
Fig. 4. I. primary VF sample and II. secondary asphyxia-associated VF sample; a) orig-inal ECG waveform, b) coefficient spectrum W {f (1–128, μ)} of the ECG
wavelet trans-form, c) most significant interval of the ECG wavelet transform coefficient spectrum W {f (50–75, μ)}.
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D. Bender et al. Informatics in Medicine Unlocked 19 (2020) 100339
functions during the training of k rounds as shown in Eq. (4), assures less Table 2
overfitting, high retention of generalization ability and is a closer esti Summary of results.
mate of the true error of the model. Feature Set Accuracy [%] AUCROC
1 X
K
K X Energy 73 0.82
CVðDÞ ¼ LðAðDk Þðxi ; yi ÞÞ (4) ECG Statistical 79 0.91
K k¼1
n Most Valuable (all sets) 85 0.88
ðxi ;yi Þe2eTk
3. Results
(at t7).
4. Discussion
The limiting attribute of this study was the underpowered data set.
Al- though the generalization of the classifier was addressed through the
Through a codependent wavelet transform and interactive SVM al
8 fold cross-validation and the SVM algorithm having the ability to
gorithm, we were able to utilize techniques that are often used in a signal
retain high infer-ence (AUCROC ¼ 0.88) from a small sample set (Ap
processing and machine learning field, in a novel way. The approach led
pendix C), a larger data set would have allowed for a more extensive
to new and previously unknown ECG waveform characteristics to
investigation, strengthening the results. On the other hand, the high-
separate the VF types. For example, it was detected that the most sig
quality data and the promising results of this study could naturally
nificant frequencies embedded in the ECG signal were between 2Hz and
lead to large data sets of human data, since the characteristics of swine
16Hz (derived from the identified scales 50–75) and yielded the most
CPR models are highly comparable with human CPR models [48–50].
decisive class separation. Several studies analyzing the VF waveform
The novelty of the MACWAVE method is that the classification
Have reported that the relevant frequencies in ECG are observed
accuracy.
within 2Hz–48Hz range, which could explain the relevance of discov
Of 85% was achieved using only noninvasive signals. Such nonin
ered major frequencies in this study [17,42,43]. In addition, studies [42,
vasive approach has obvious advantages: no trauma to nerves, tissues,
44,45] have pointed out that VF ECG patterns change with the duration
and organs, no taxing on the overall circulatory system and almost
of CPR due to correlation with coronary perfusion pressure. This might
instant signal availability with no preparation time. An additional
explain the relevant changes in dominant frequency trends that were
captured through detailed examination of the WT frequency spectrum. achievement of our research was to provide fast access of the developed
method in a way that it could utilize the technology already available in
However, none of the mentioned studies showed what particular attri
butes in the bandwidth 2Hz–16Hz can be used as distin-guishing fea every ICU.
tures to classify the investigated VF types during CPR, something that we
were able to identify through interactive ML algorithm and MI feature 5. Conclusion
reduction, as listed in Table 1, in the “Most Valuable (all sets)” column.
A novel methodology for classification of two important pediatric
The significance of identified features suggests that further investigation
ventricular fibrillation types was developed achieving a classification
exploring the frequency trends with respect to time might result in a
accuracy of 85% and.
much faster VF classification, needing a shorter ECG time window.
AUCROC of 0.88. The constructed MACWAVE algorithm demon
Although 85% classification accuracy signifies a reliable identifica
strated and validated the superiority of ML approach, over more
tion of car-diac arrest’s pathology, the results suggest additional inter
simplistic statistical anal-ysis, by identifying previously unknown class
pretation as well. Several studies have shown that initial primary VF
decisive characteristics of the VF waveforms, such as frequency trends.
waveform and prolonged primary VF waveform are characteristically
The significance of gained knowledge can expand the underlying
different [42,46,47]. These observations might imply that the achieved
physical and medical meaning of the arrest type. Most importantly it
classification in this study can be the result of waveform differences
should be noted that this is the first research effort to ever ana-lyze this
between prolonged primary VF and initial secondary
critical pediatric problem, the significance of which could lead to more
asphyxia-associated VF. It should be noted here that the goal of this
successful patient-centric pediatric cardiopulmonary resuscitation
study was to classify CA injury promptly after the beginning of CPR.
treatment.
Hence, future studies will seek additional understanding of the knowl
edge gained through this study, in particular examining beginning of
primary VF (at t0) and beginning of secondary asphyxia-associated VF
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D. Bender et al. Informatics in Medicine Unlocked 19 (2020) 100339
Signal processing theory separates majority of the signals into four classes: deterministic (periodic and transient) and nondeterministic (stationary
and non-stationary). Despite this clear classification, most of the real-world signals, and especially human data, may contain a few or all of such
attributes. Subsequently this creates a need for a signal processing tool equipped to uncover aspects such as time specific discontinuities and
breakdown points, as well as trends and transients.
Short-time Fourier transform (STFT) and wavelet transform (WT) allow for such analyses. However, the drawback of STFT is that there exists a
trade-off between the time resolution and frequency resolution. In other words, the time resolution and bandwidth of STFT can not be selected to be
small simul-taneously [30,51]. In contrast to this, the wavelet transform addresses these limitations and provides an elegant solution to the drawbacks
of STFT [30].
Mathematically, the wavelet transform of a continuous signal f (x) is defined by Eq. (A.1), where Ψ is the selected wavelet function. The trans
formation can also be interpreted as a cross-correlation of a continuous signal f (x) and a set of wavelets Ψ s,μ with different widths at different temporal
locations. The widths, or dilation and contraction of the wavelet is governed by the scaling parameter s and is responsible for the resolution of the
transform. The temporal location, or the movement of the wavelet along the time axis is governed by the translational parameter μ.
Z ∞ �t μ�
Wff ðs; μÞg ¼ f ; Ψs;μ ¼ f ðtÞΨ* dt (A.1)
t¼ ∞ s
Fundamentally, the wavelet transform measures the similarity between the analyzed signal f (x) and modified base wavelets Ψ s,μ. Thus, the wavelet
trans-form is a set of WT coefficients W (WT coefficient spectrum W {f (s, μ)}), where the magnitude of W {f (s, μ)}) represents how close the wavelet
function Ψ s,μ is correlated with the windowed segment of the analyzed signal f (t) [30,51,52]. In non-technical terms, wavelet transform can be
thought of as a ‘mathematical microscope’ [27], where the scale s is the magnification parameter at an explored temporal location μ. The illustrations
in Fig. 4 show a graphical and more in-tuitive representation of this idea applied to our data. The temporal position of the transform is represented by
the x-axis, while the y-axis represents the scale s of the base wavelet Ψ , and the color intensity, the magnitude of the wavelet coefficient Wx,y.
Mutual information (MI) is a commonly used filtering method to select a subset from a given feature set, independent of the subsequent ML al
gorithm [53,54]. It is relatively robust against overfitting, and yields the minimum gen-eralization error and therefore, is the preferred feature ranking
approach for training sets with small sample sizes [55]. In general, MI is a measure of depen-dency between a random variable X and a random
variable Y. Mathematically it is defined as
XX pðx; yÞ
IðX; YÞ ffi pðx; yÞ log (B.1.)
x2X y2Y
pðxÞepðyÞ
where p(x, y) is the joint probability mass function and p(x) and p(y) are the marginal probabilities [53,56]. If X and Y are entirely independent, their
mutual information I(X, Y) has a minimum value of zero. Consequently, the features whose MI with the class variable are the largest, are considered
the most important ones; thus, in the established MI rank (Table 1) the features are in descending order with respect to their MI value.
The support vector machine (SVM) classifier was chosen as the machine learning algorithm to build the desired classification mode for several
reasons. Foremost, an SVM classifier is suitable for small data sets, as is the case here. The algorithm can be trained to construct an accurate clas
sification model with limited or unbalanced data samples without sacrificing the generalization property for future unseen data. The framework of
SVM is based on sound optimization theory, governed by a mathematical objective function, Eq. (C.1).
1 X
N
� � �
hðw; b; αÞ ¼ jjwjj2 αe yi wT xi þ b 1 ; (C.1.)
2 i¼1
where h(w, b, α) ¼ separating hyper plane, w ¼ separating vector b ¼ bias, α ¼ Lagrange multiplier, xi ¼ sample i, and yi ¼ class of sample i.
The geometric interpretation of ||w||, is that it is the width of the margin be-tween the two classes and in its simple geometric interpretation
provides helpful insight for further investigation of the data [57]. Least separable samples (xi, when 1 is small or when xi is a Support Vector) can be
easily identified and lead to better understanding of relevant features. Consequently, that leads to the most relevant traits of the relevant signals and a
better understanding of the most optimal feature space [58]. Further, since the SVM learning algorithm considers all samples (i ¼ 1 …, N), the effect of
the obtained model on the classi-fication accuracy due to the optimized feature space can be easily evaluated with all N samples. This process can be
carried out repeatedly resulting not solely in a better accuracy of the classifier, but as in our case, a better understanding of significant raw signal
characteristics and their physical meaning.
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Declaration of interest: The Authors have no interests to declare.
13. The effect of computerized physician order entry on mortality
rates in pediatric and neonatal care setting: Meta-analysis 17. Automated Grading of Prostate Cancer using Convolutional
(Informatics in Medicine Unlocked; 2020; Vol 19C; Article Neural Network and Ordinal Class Classifier (Informatics in
number: 100,308) https://doi.org/10.1016/j.imu.2020.100308 Medicine Unlocked; 2019; Vol 17C; Article number: 100,256) htt
ps://doi.org/10.1016/j.imu.2019.100256
Declaration of interest: The Authors have no interests to declare.
Declaration of interest: The Authors have no interests to declare.
14. Identification of the core ontologies and signature genes of
polycystic ovary syndrome (PCOS): A bioinformatics analysis.