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Arboviruses: A Family on the Move

1
Paul R. Young

Abstract Keywords
Arboviruses are a diverse group of vector-­ Arthropod-borne viruses · Zoonotic infec-
borne viruses, many of whose members are tions · Virosphere · Arbovirus transmission ·
the cause of significant human morbidity and Climate change impacts
mortality. Over the last 30 years, the emer-
gence and/or resurgence of arboviruses have
posed a considerable global health threat. The 1.1 Introduction
ongoing geographical expansion of the den-
gue viruses (DENV), along with the explosive Arboviruses (a term derived from the descriptor,
outbreaks of West Nile virus (WNV), arthropod-borne viruses) are an amazingly
Chikungunya virus (CHIKV) and more diverse group of viruses that are transmitted from
recently, Zika virus (ZIKV) have all served as infected to susceptible hosts by a range of arthro-
reminders that new epidemics may emerge at pod vectors that include mosquitoes, ticks, sand
any time from this diversity. A clearer under- flies or biting midges [20, 21]. Following inges-
standing of what mechanisms drive these dra- tion of a blood meal from an infected host, viruses
matic changes in vector-host transmission multiply in the insect mid-gut and then invade
cycles that result in the human population underlying tissues to cause a spreading infection
becoming significantly more exposed, will (collectively referred to as the extrinsic incuba-
help to prepare us for the next emerging epi- tion period) that ultimately results in a high-titred
demic/pandemic. This Chapter seeks to pro- viral load, particularly in the salivary glands.
vide a brief overview of the arboviruses, their They are then passed on to humans or other ver-
mode of transmission and some of the known tebrates during insect biting. Most diseases
factors that drive their expansion. caused by arboviruses are zoonoses, primarily
infections of vertebrates that can occasionally
cause incidental infection and disease in humans.
Notable exceptions to this are the dengue viruses
(DENV), as humans are the primary vertebrate
host. Indeed, passage through humans is essential
P. R. Young (*)
Australian Infectious Diseases Research Centre, in maintaining the virus transmission cycle. The
School of Chemistry and Molecular Biosciences, nature of this two-way dependency prompted
The University of Queensland, Brisbane, Australia Duane Gubler to once remark that “humans could
e-mail: p.young@uq.edu.au

© Springer Nature Singapore Pte Ltd. 2018 1


R. Hilgenfeld, S. G. Vasudevan (eds.), Dengue and Zika: Control and Antiviral Treatment
Strategies, Advances in Experimental Medicine and Biology 1062,
https://doi.org/10.1007/978-981-10-8727-1_1
2 P. R. Young

be considered the vector for dengue virus 1.2 Who Are They?
infection in mosquitoes”. While monkeys have
been implicated as an alternative vertebrate host More than 500 arboviruses have been recognised
to humans for dengue in rural settings, it is worldwide [21], a number that is undergoing
unlikely that this sylvatic cycle contributes much rapid and exponential revision as researchers
to the current global impact of this apex interrogate the virosphere using deep sequencing
arbovirus. [19]. Estimates have suggested that the arbovi-
By definition, arboviruses are arthropod-­borne, ruses we have recognised to date may represent
however some are grouped within the arboviruses less than 1% of the total. Only some of the cur-
despite no apparent association with an arthropod rently known arboviruses, some 150, are known
vector, primarily because of their close genetic to cause human disease [21]. Some infect humans
relationship. The naming of individual arbovi- only occasionally or cause only mild illness,
ruses has had a somewhat eclectic history with no whereas others are of significant medical impor-
formal taxonomic approach having been estab- tance, causing large epidemics.
lished. Some refer to dialect names after the ill- Most arboviruses causing human disease
ness they induce (chikungunya, o’nyong-nyong, belong to three families; Togaviridae (genus
dengue), others recognise the name of the loca- Alphavirus), Flaviviridae (genus Flavivirus) and
tion where they were first discovered (West Nile, Bunyaviridae (Bunyavirus, Orthobunyavirus,
Bwamba, Ross River, Zika) and some reflect a Nairovirus and Phlebovirus genera), with mem-
characteristic clinical presentation (Western bers of three further families, Rhabdoviridae,
equine encephalitis, yellow fever) [21]. Orthomyxoviridae and Reoviridae also contribut-
Over the course of the last two decades, a dra- ing (Fig. 1.1). The alphaviruses and flaviviruses
matic expansion in the territorial range of a num- are enveloped, linear single-stranded, positive-­
ber of arboviruses has seen a significant increase sense RNA viruses. They are spherical in shape,
in global epidemic activity. These include West with an underlying capsid and measure from 40
Nile virus and its emergence in New York in to 70 nm. The bunyaviruses are enveloped, seg-
1999 and subsequent march across the North mented, circular negative-strand RNA viruses.
American continent over the next 4 years and They are generally spherical and measure
subsequent spread, both north and south over the 80–120 nm in diameter.
following decade. Chikungunya virus with its The most important group, at least from a
sudden expansion on La Reunion in 2005 and human disease perspective, are the flaviviruses
spread across the Indian subcontinent, South East with a number of viruses in this group being of
Asia and globally. The ongoing expansion of the global health concern; dengue virus (DENV),
dengue viruses across the tropical zone and West Nile virus (WNV), Zika virus (ZIKV) and
beyond, and of course, the recent explosive epi- yellow fever virus (YFV) [11]. Others, including
demic of Zika virus in South America, on the Japanese encephalitis virus (JEV), tick-borne
other side of the world from its first isolation in encephalitis virus (TBEV), Venezuelan equine
an African forest some 70 years previously. One encephalitis virus (VEEV) and St. Louis enceph-
thing is certain; we will see more of these out- alitis virus (SLEV) are usually restricted to spe-
breaks in the years to come [1, 9]. As a brief cific regions. However, the spread of arboviruses
introduction to the research efforts detailed in the across several regions have lead to major interna-
following Chapters, this review provides an over- tional health concerns. WNV with its jump from
view of the group of viruses we collectively refer the Middle-East into the Americas, chikungunya
to as arboviruses, and addresses some of the virus (CHIKV) moving into islands in the south-
issues that are helping to drive their expansion. west Indian Ocean, and from there to Southeast
1 Arboviruses: A Family on the Move 3

Fig. 1.1 Arboviruses and virion schematics. Viruses dsRNA. Arboviruses that are associated with human dis-
are grouped according to genome composition: single-­ ease are mostly found within the Togaviridae, Flaviviridae
stranded positive-sense RNA, ss + RNA; single-stranded and Bunyaviridae families. Virus schematics provided by
negative-sense RNA, ss-RNA; double-stranded RNA, ViralZone, Swiss Institute of Bioinformatics

Asia and the Americas, and Zika virus which e.g., DENV and ZIKV) while some are highly
spilled out of Africa to Southeast Asia, the islands complex (involving multiple vectors and hosts,
of Polynesia and then to Brazil in an explosive e.g., JEV, WNV and Rift Valley Fever virus,
epidemic in 2015–2016 (Fig. 1.2). RVFV). The epidemiology of human arboviral
disease usually involves one of two transmission
cycle scenarios (Fig. 1.3). In the first, the virus is
1.3  ow Are They Maintained
H stably and naturally maintained via transmission
and Spread? between vectors and wild animals in a sylvatic
(jungle) cycle with spillover occurring when an
Three key elements are required for effective infected arthropod bites either a domestic animal
maintenance of arbovirus transmission: the vec- or human that has strayed into that ecological
tor (mosquito, tick, sandfly, biting midge), the niche. This mode of infection results in small
vertebrate host(s) and appropriate environmental clusters of cases initiated at the same site. The
conditions. Some transmission cycles are rela- second is the urban cycle where a person or
tively simple (involving one vector and one host, domestic animal, infected via the sylvatic mode
4 P. R. Young

1985
1977

1982
1940s

1994

Dengue virus

2007

2010 2013

2010 2014

2007
2004 2006

2005

Chikungunya virus

Chik

1990s
2005
1990s

2000s

1990s

2000s
1930s 1950s

1950s
1970s
Kunjin virus

West Nile virus

2016
2007
1954 1970s 1977/2012
1947 Yap
Micronesia
1975/2007 2013
Easter 2015
Tonga
Island
French
2016
Polynesia
2014

Zika virus

Fig. 1.2 Arbovirus epidemiology. Four examples of blue indicate historical, ongoing and recent viral activity
arboviruses that have emerged as globally distributed with dates highlighting key epidemic translocation events.
threats to human health. Geographical regions shaded in Dengue virus (DENV); the four serotypes of dengue virus
1 Arboviruses: A Family on the Move 5

or moving from another area with urban activity, Individual arboviruses may have more than one
acts as an amplifier host in the transfer of the host species involved in transmission cycles. For
virus to other persons or domestic animals in the example, birds (herons in particular) are consid-
community. These cases occur as epidemics or ered to be the major maintenance hosts for the
epizootics in nature (Fig. 1.3) The vector involved flavivirus JEV. In Asia however, pigs have also
in the urban cycle may be the same or different to been shown to amplify the virus to high titres.
that in the sylvatic cycle and indeed, there may be Feeding mosquitoes can therefore be readily
multiple vector species playing a role in trans- infected, with transmission of the virus to humans
mission in either cycle. who live in close proximity. The life cycle of
The primary arboviral hosts are mammals and Ross River virus (RRV) in Australia involves
birds with the potential for virus dispersal complex relationships between multiple vectors
depending on the type of vertebrate host involved and zoonotic (marsupials, horses, possums, bats)
[21]. Migratory birds can facilitate virus move- reservoirs across multiple environments includ-
ment over large distances, such as occurred with ing urban, inland (freshwater wetlands) and
the spread of WNV through the Americas, coastal (estuarine wetlands) regions [3].
whereas transmission through most terrestrial Host species may move virus from an area of
hosts result in virus activity that is restricted to a active transmission to another location.
particular region. Movement by viraemic waterbirds has been sug-
Animal hosts that are essential for arbovirus gested as a mechanism of spread for a number of
transmission and for the maintenance of virus arboviruses including Murray Valley encephalitis
populations are referred to as reservoir hosts, virus (MVEV), JEV, WNV and Eastern equine
with the immune status of these hosts impacting encephalitis virus (EEEV). Arboviruses can also
on transmission rates. Their long co-evolution be introduced into new areas by the movement of
with their viral passengers is characterised by humans, particularly as air travel now enables
high titre viraemia that enables vector mediated movement between two destinations anywhere in
virus transmission to occur, often in the absence the world, all within the time window of a typical
of overt disease. A wide variety of reservoir host viraemic period. Infected arthropod vectors may
species have been implicated in arbovirus dis- also disseminate disease if they are carried on air,
eases. These include birds, mammals (including marine, rail or road transport. This has been pro-
primates), rodents, marsupials and bats.

Fig. 1.2 (continued) continue to spread across the globe, portation event resulted in WNV landing in New York
with serotype subsets cycling in sequence with develop- from Israel in 1999. The subsequent march of WNV west
ing local herd immunity and virus evolution. The sudden across the North American continent was driven primarily
and dramatic expansion of dengue in the early 1940s with by migration of its bird hosts, resulting in its wide distri-
the influx of naive adult hosts during the Pacific campaign bution across the Americas over the subsequent decade.
of WWII seeded much of the subsequent global epidemic Zika virus (ZIKV); ZIKV was first isolated in 1947 but it
activity. After successful vector eradication programs in wasn’t until 1954 that the first human cases were reported
the first half of the twentieth century, dengue was re-intro- in Nigeria. While its spread across Africa and into India
duced into the Americas, first into Cuba in 1977 with sub- and South East Asia were noted, it wasn’t until a large
sequent spread throughout tropical South America as its epidemic on the island of Yap in 2007 highlighted the
vector, A. aegypti reclaimed its earlier territory. potential importance of ZIKV to human health. The sub-
Chikungunya virus (CHIKV); CHIKV exploded out of sequent epidemic in French Polynesia in 2013/2014 was
Africa following a large epidemic on the island of La thought to be the seed for its emergence in Brazil in 2015.
Reunion in 2005. A single mutation in the virion surface The cause of the explosive nature and severity of the
protein facilitated a spillover into a new mosquito host, A. resulting epidemic over 2015–2016 is still the subject of
albopictus and further, global spread, reaching the considerable conjecture – the presence of a naïve popula-
Americas in 2014. West Nile virus (WNV); WNV was tion primed with a high level of potentially enhancing
known to circulate within Africa from the 1930s when it dengue-specific antibody, viral genome mutation or a
was first isolated, spreading to the Middle East and combination of both along with additional factors remain
Europe in the 1990s. What is thought to be a single trans- possibilities
6 P. R. Young

Fig. 1.3 Arbovirus transmission cycles. A. Enzootic act as reservoirs for further rounds of transmission.
(low level endemic virus transmission within native ani- Exceptions are driven by specific human activity; e.g.,
mals), epizootic (higher level epidemic transmission, usu- transfusion and transplantation. C. For some arboviruses
ally within domestic animals) and epidemic cycles within (e.g., DENV and ZIKV), the epidemic cycle in humans
humans are inextricably linked for many arboviruses, with can be self-sustaining given the high levels of viraemia
spillover events driving the dynamics of each cycle. B. For resulting in efficient transmission between vector and
some arboviruses (e.g., WNV) the epidemic and epizootic humans without the need for an enzootic amplification
spillover from the enzootic cycle are unimportant for host. Nevertheless, occasional spillover events from the
arbovirus survival, as these are dead-end hosts that do not enzootic sylvatic cycle have been recorded

posed as the most likely mechanism for introduc- infected to an uninfected vector during co-­
tion of WNV into the USA in 1999. feeding on a naïve host has also been reported.
Some hosts that become infected may not be Invertebrate hosts include mosquitoes, sand-
sufficiently viraemic or may not be infected with flies, ticks and culicoides (biting midges)
sufficient regularity to contribute to the stable although most arboviruses have been recovered
maintenance of virus populations and are referred from mosquitoes. While transmission of arbovi-
to as incidental hosts. Incidental hosts may or ruses most often follows the bite of the infected
may not show symptoms. For many arbovirus arthropod, transmission has also been reported in
infections, humans are usually an incidental host, other ways. European TBEV can be acquired by
often being a dead end in the transmission chain. drinking the milk of infected goats, VEEV (in
Arthropod-borne viruses are distinguished cotton rats) apparently via urine or faeces infect-
from other animal viruses because of their ability ing the nasopharynx, WEEV possibly through
to infect both vertebrate and invertebrate hosts. aerosol from a patient and WNV and DENV has
The virus replicates within the cells of the arthro- been transmitted by blood transfusion. DENV,
pod vector before being transferred to a suscep- JEV, WNV and CHIKV have all been transmitted
tible host [16]. Occasionally, arthropods may from mother to foetus following infection during
also transmit viruses by mechanical transmission pregnancy, but this is considered rare. In contrast,
with the vector simply transferring the virus from an unusually high rate of maternal to foetal trans-
an infected to a susceptible host without replica- mission has been observed in the recent ZIKV
tion in the vector itself. Direct transfer from an outbreak in Brazil. The finding of Zika virus in a
1 Arboviruses: A Family on the Move 7

range of bodily fluids including semen, tears and many also develop joint swelling and stiffness.
sweat, as well as the apparently high rate of CNS Rash may be present and is usually generalised
invasion following foetal infection remains to be and maculopapular, although occasionally vesic-
fully explained [18]. ular. Petechial rashes are less common and may
be an early indicator of haemorrhagic fever. In
the vast majority of cases, febrile illness is fol-
1.4  hat Diseases Do They
W lowed by recovery. In the remainder, illness may
Cause? progress to one of the more severe forms of dis-
ease, sometimes following a few days of remis-
The vast majority of arboviral infections lead to sion. These can be broadly grouped into those
either an asymptomatic or non-specific mild ill- arboviruses causing haemorrhagic fever, enceph-
ness. Only a handful of those who are infected alitis or polyarthralgic illness (for further discus-
develop clinical symptoms for which the indi- sion see [21]).
vidual arbovirus is known. For the flaviviruses,
the case to infection ratio varies considerably,
from very low (e.g. around 1:300 for encephalitis 1.5  hat Is Driving Arbovirus
W
due to JEV) to quite high (1:4 for fever as a result Expansion?
of DENV infection). It may be higher during epi-
demic (rather than endemic) disease activity, and As noted above, humans are often no more than
will be modified by a range of other factors, incidental hosts for arbovirus infection. However,
including host susceptibility and virus strain. The their behaviour, along with environmental factors
major burden of disease is at the extremes of life, can play a significant role in the activity and
the very young and the elderly. For alphavirus spread of these viruses [20] with many human
infections, particularly those causing arthritis, the activities known to encourage transmission [4, 7,
ratio of symptomatic to asymptomatic infection 17, 21]. The construction of dams and extensive
is typically higher than that of the flaviviruses, areas of irrigation promotes the breeding of large
from 1:40 to 1:3. If clinical manifestations arise numbers of mosquitoes that is otherwise unusual
after infection they do so after an intrinsic incu- for these geographical locations. For instance,
bation period lasting from a few days to a week the development of rice fields encourages breed-
or more. During that time the virus replicates at ing of Cx. tritaeniorhynchus in Sarawak that in
the site of inoculation, then further amplifies turn fosters the spread of JEV, and Mansonia uni-
within the reticuloendothelial system before it formis and Anopheles gambiae in Kenya spread-
becomes viraemic and spreads to target organs. ing CHIKV, o’nyong-nyong virus (ONNV) and
Symptomatic arbovirus infection often pres- Sindbis virus (SINV). The seasonal removal of
ents as a systemic febrile illness. In the early old vegetation in Sarawak leads to heavily pol-
stages, this illness may be non-specific or even luted pools that support large populations of culi-
suggestive of other viral illnesses, including gas- cines. Driving cattle into marginal forest areas in
trointestinal and respiratory infections. In a India promotes the growth and transport of ticks,
developing world setting featuring an increased and the incursion of people into forest areas
burden of disease, this can be particularly prob- exposes them to infection with YFV and the tick-­
lematic, often delaying appropriate clinical man- borne diseases. In many countries, the practice of
agement. On-going development of low cost, using large containers for water storage has
point-of-care diagnostics to provide early and helped to increase Aedes aegypti populations and
effective diagnosis, remains an important goal of the consequent transmission of DENV, CHIKV
current research efforts. Headache is common and other viruses vectored by this species.
and may be severe and accompanied by meningi- Environmental conditions, particularly rain-
tis. Muscle and joint aches and pains are com- fall, temperature and humidity, also have an
mon, especially with alphavirus infections where important role to play in arbovirus transmission
8 P. R. Young

cycles with the result that arbovirus activity is placency with regards vector control. Mosquito
often seasonal. For example, the alphaviruses numbers in metropolitan areas surged, with con-
transmitted by mosquitoes in temperate regions sequent increased transmission of WNV.
cause disease in summer during periods of As noted above, the last two decades have
increased vector activity [2]. In tropical areas, seen a dramatic increase in the emergence and/or
human infections caused by arboviruses usually re-emergence of a number of serologically dis-
occur during the wet season, with increased virus tinct arboviruses [6, 15, 21]. Ecological factors
activity again coinciding with periods of high have played a pivotal role in this expansion with
vector numbers. As mosquito larvae and pupae a rich array of demographic, cultural and societal
are aquatic, the abundance of arthropod vectors is changes impacting arbovirus transmission
directly affected by the amount of rainfall and between vectors and hosts. Understanding some
flooding in a particular region. Rainfall is also of these mechanisms will provide insight into
required to maintain permanent water bodies, or future predictions of arboviral activity, disease
in some cases create temporary water bodies that risk assessment and control.
provide a sanctuary and breeding grounds for Southeast Asia has experienced an exponen-
water birds that act both as mechanisms for intro- tial increase in the number of arbovirus related
ducing the virus into that area and for amplifying epidemics; YFV and RVFV cases are on the rise
the virus. Humidity can also play a role, with in Africa; South America has seen the re-­
increased humidity facilitating increased survival emergence of DENV and YFV and the emer-
of mosquitoes. Temperature can also affect the gence of ZIKV; and the incursion into North
length of the extrinsic incubation period with America and Europe of some arboviruses previ-
most studies showing that the extrinsic incuba- ously restricted to the tropical zone (e.g., CHIKV
tion period for mosquitoes is shorter at 30 °C and DENV) all serve to emphasize that no region
than at lower temperatures thereby ensuring that of the globe is resistant to these threats. Their
mosquitoes become ‘infectious’ in a shorter time spread has been linked to a range of complex
after ingestion of an infected blood meal. High factors.
external temperatures on the other hand may It is recognized that biodiversity plays an
have adverse effects on vector survival. important role for arbovirus maintenance with
Global climate change will significantly African, Southeast Asian and South American
impact on arbovirus transmission cycles over tropical regions, particularly their rainforests,
time [7]. The amount and extent of rainfall, fre- considered reservoirs for many of these arbovi-
quency and heights of high tides, temperature, ruses. However, it is the demographic and soci-
humidity and consequent movement of vertebrate etal changes in the human population during the
hosts and human populations will all contribute. past two to four decades that has had the biggest
The extent and timing of these environmental impact on the revival of arbovirus infections.
changes is unknown, but because of the complex Unprecedented population growth has been the
interactions between these viruses, their hosts underlying driver of many of the changes that
and vectors as well as the environment, it is likely have affected transmission dynamics. These
that even minor changes will affect arbovirus include rapid urbanization, deforestation, new
activity in different regions. This may result in an dams, an expansion in irrigation, and a lack of
increased number of cases and/or a greater geo- closed water storage containers. The resulting
graphical spread of these viruses [5, 12–14]. increase in mosquito populations and their closer
Climate change impacts on arbovirus transmis- contact with human communities has contributed
sion are already being played out, such as in the to increased virus, and hence disease transmis-
dramatic resurgence of West Nile virus in the US sion. The changing demographics that have
in 2012. This emergence was linked to a record-­ resulted from modern transportation have also
breaking drought across the US in combination played a significant role in the distribution and
with sporadic, end of season rains and local com- transmission dynamics of arboviruses. While the
1 Arboviruses: A Family on the Move 9

geographic distribution of some arboviruses and data showed two distinct ZIKV lineages circulat-
their mosquito vectors has expanded, resulting in ing in Africa and a third lineage formed by the
recurrent and larger outbreaks (e.g., DENV), oth- Micronesia and Malaysia strains [8]. The subse-
ers have invaded new geographic regions having quent spread of ZIKV to the Americas in 2015
taken advantage of susceptible mosquito vectors and the extensive epidemic it caused is now being
and hosts to become established (e.g., WNV, attributed, in part, to specific mutations found in
CHIKV and ZIKV). Clearly, factors such as the these circulating South American viruses.
absence of herd immunity and a lack of vector
control have been instrumental in the re-­
emergence of several arboviral infections (e.g., 1.6 Conclusion
CHIKV, JEV, and more recently, ZIKV).
The changing epidemiological patterns of In a world of rapid travel and transportation,
arboviruses are complex and unique to each many other arboviruses have the potential to
virus, however virus evolution can also be an spread geographically and cause serious out-
important driver of the emergence of these new breaks. What is of concern is that most of these
disease threats. One clear example of how virus new introductions are not detected until an epi-
evolution has re-defined the epidemiology of an demic or some unusual situation signals the
arbovirus infection is the re-emergence and alarm, often too late to effect control. The world
spread of CHIKV. Sequence analyses have shown is finally coming to grips with the notion of epi-
that CHIKV originated from Africa and was later demic preparedness and the realization that sig-
introduced in to Asia with the delineation of three nificant and coordinated effort will be required to
phylogenetic distinct clusters: East-, Central- and effectively deal with the inevitable future threats
South-African (ECSA), Asian, and West-African to global health posed by arboviruses on the
clusters [10]. Analysis of CHIKV strains isolated move.
from the Indian Ocean outbreaks indicated that it
was more closely related to the ECSA cluster Acknowledgements This brief overview has been
than the Asian or West African clusters. However, adapted, in part from [21]. The author wishes to express
his thanks for ongoing funding support from the Australian
90% of the CHIKV strains isolated revealed a National Health and Medical Research Council and to
nucleotide mutation leading to an alanine to ViralZone, SIB Swiss Institute of Bioinformatics for
valine change at position 226 in the virus E1 gly- granting their permission to use the virus schematics in
coprotein. This single amino acid change was of Fig. 1.1.
particular interest as it was exclusively found in
CHIKV isolated from Ae. albopictus. This muta-
tion was subsequently shown to be associated References
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