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Forensic Science International: Reports 1 (2019) 100046

Contents lists available at ScienceDirect

Forensic Science International: Reports


journal homepage: www.elsevier.com/locate/fsir

Novel application of the ‘Hardy-Weinberg equilibrium’ in the analysis of


cusp patterning phenotype in Gujarati Population
Jayasankar P. Pillai a, * , Dhwani Patel b
a
Institute of Forensic Sciences, Gujarat Forensic Sciences University, Gandhinagar, India
b
Division of Forensic Odontology, Institute of Forensic Sciences, Gujarat Forensic Sciences University, Gandhinagar, India

A R T I C L E I N F O A B S T R A C T

Keywords: The non-metric characteristics like the tooth shape, number of cusps and other structural features contribute for the
Dental anthropology forensic and anthropological investigations and in establishing the population inter-relationships. The mandibular
Hardy-Weinberg equilibrium 2nd premolar and the maxillary 2nd molars often show variations in their occlusal morphology. The Hardy-
Population genetics
Weinberg equilibrium is applied in a novel way to determine the cusp phenotype in these two teeth in a
Cusp pattern
representative sample from Gujarati population. The dental stone models of 295 students of dental college in the age
Dental non metric trait
range of 19–23 years were used for this study. The two-cusped second premolar was present in around 60% the
subjects on both the right and left side. There is no significant difference in the distribution of the number of cusps in
both the right and left second premolars between male and female subjects. There was a significant difference in the
distribution of the number of cusps in left second molar between male and female (x2 = 4.073, df = 2, p < 0.05). The
strongest right - left correlation in the number of cusps was observed in maxillary 2nd molar (r = 0.809, p < 0.001).
On application of Hardy-Weinberg equilibrium, it was found that there was variation in the observed frequencies
and in the expected frequencies for the cusp number phenotypes in both the teeth.

Introduction Hardy – Weinberg equilibrium

Dental morphological traits have been extensively studied to assess The Hardy –Weinberg (H-W) equilibrium is a principle which states
morphological affinities and variations among different population that alleles and genotype frequencies in a population will remain constant
groups [1,2]. These traits often appear discrete and heritable and show from generation to generation in the absence of other evolutionary
different degrees of expression [3,4]. Such variations in the dental traits influences. It is a mathematical equation derived by Geoffrey H. Hardy
are significantly correlated with the genetic and geographic factors [5]. (1877–1947), a mathematician and Wilhelm Weinberg (1862–1937), a
In population genetics, the phenotypic characteristics in teeth are Physician [11]. In the field of population genetics, the H-W equilibrium is
closely related to the genotype and this ‘phenogenetic’ relationship considered as a model to estimate the frequencies of alleles and genotypes
favours the prediction of a particular phenotype without a need for [12]. Allele is a variant of a gene and for one gene there could be 2 alleles
genetic analysis [6]. Also the phenogenetic drift can define how much (one from mother and one from father). Allele frequency is nothing but
genotype can evolve without a corresponding change in phenotype the number of times that particular allele is present in a particular loci of
[3,6]. The genetic information not only specifies the particular chromosome. It is determined by counting how many times the allele
characteristics of a tooth, but also determines the inheritance pattern appears in the population then dividing by the total number of copies of
and the population variations of that trait. The environmental factors the gene. The frequency of a particular allele in a population will always
also tend to play a role in the phenotypic manifestation of dental traits; remain constant, if there is no evolutionary change in that population.
however this has not yet been fully quantified [7,8]. The degree of Once the allele frequency is known, it is possible to estimate the genotype
variability of majority of dental non metric traits is between 0.4 to 0.9 frequency using the H-W principle. The allele frequency or the genotype
[9]. The frequency of occurrence of each trait is phenotypic and the frequency will remain same for a particular gene from generation to
genotype frequency is unknown however, some genes act pleiotropi- generation when the H-W equilibrium is met. In a simple genetic locus
cally on multiple dental phenotypes [10]. there are two alleles A and a. The Hardy-Weinberg equation is expressed

* Corresponding author.
E-mail addresses: jppillaigdch@gmail.com (J.P. Pillai), dhwani.patel@gfsu.edu.in (D. Patel).

http://doi.org/10.1016/j.fsir.2019.100046
Received 18 July 2019; Received in revised form 3 October 2019; Accepted 6 October 2019
Available online 17 October 2019
2665-9107/© 2019 The Author(s). Published by Elsevier B.V. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-
J.P. Pillai, D. Patel FSIR 1 (2019) 100046

as p2 + 2pq + q2 = 1, where p is the frequency of the "A" allele and q is the anatomic details especially of the mandibular 2nd premolar and the
frequency of the "a" allele in the population. In the above mentioned H-W maxillary 2nd molars. The teeth with restorations or with crown and
equation, p2 represents the frequency of the homozygous genotype AA, q2 bridges were excluded. The study subjects included 140 males and 155
represents the frequency of the homozygous genotype aa, and 2pq female originating from different parts of Gujarat state and with diverse
represents the frequency of the heterozygous genotype Aa. Also the sum of religious and caste backgrounds. Informed signed consents were obtained
the allele frequencies for all the alleles at the locus is 1, and hence from the subjects prior to the start of the impression procedures. Using a
p + q = 1 [13]. The H-W equation is used to calculate the frequencies of magnifier glass and the Arizona State University Dental Anthropology
three genotypes when the p and q allele frequencies are known. The total System (ASUDAS) plaques as standard, the number of cusps in
number of possible genotypes is calculated using the formula: G = n mandibular 2nd premolar and in maxillary 2nd molar on both the sides
(n+1)/2, where ‘n’ is the number of different alleles of a particular gene were counted and noted in the performa. The collection of the
and the Hardy-Weinberg equation can be used to measure whether the quantitative data began with the operational definition of the cup trait
observed genotype frequencies in a population differ from the frequencies expression. The definition in the present study focused on the number of
predicted by the equation. cusp elevations present on the buccal and the lingual halves of the
occlusal surfaces of mandibular 2nd premolar using ASUDAS plaques as
Dental non metric traits reference. Similarly, the hypocone (distolingual - 4th cusp) expression in
the maxillary 2nd molar was observed and based on its presence or
Dental morphology is highly genetically controlled and the non- absence, the cusp number was considered as 4 or 3 respectively. The
metric dental traits have been used in modern contexts to distinguish quantitative analysis of the cusps was done twice on all the samples on
between populations [14]. It was not until 1991 that the standards for two different occasions by the same observer. The data was stored in the
some non-metric dental traits were established [15]. The cusp size, Excel sheet and the statistical analysis was performed using SPSS version
number, location and occlusal groove patterns are considered as some of 23.0 (SPSS Inc, Chicago, IL).
the main dental crown morphological traits in the field of dental
anthropology. Its mode of inheritance and the diversity in different Calibration
populations are being studied widely. In the permanent dentition, the
mandibular 2nd premolar and maxillary 2nd molar most often show The author practiced the handling of ASUDAS plaque by making
variations in number of cusps. In the former there are two cusp (2C) and repeated series of observations with a gap of one month between the first
three cusp (3C) variants and in the latter there are three cusp (3C) and four and the second recording. The recorded scorings were compared and this
cusp (4C) variants [16]. The scoring of cusp number traits using the repeated comparisons led to standardization of concepts.
reference plaque is easy and the developmental chronology of these two
teeth is almost similar in humans [17]. The dental non-metric Statistical analysis
characteristics are more genetically related and because of the evolution
of the population genetics, a link between the genotype and the The intra-observer agreement between the first and second recording
phenotype, what is known as “phenogenetics” relationship could be of data was tested using Cohen’s Kappa score. The extent of the
established [6]. The phenotypic variations in the tooth also give valuable association between the number of cusps and gender was assessed using
information about the migration pattern in humans and in understanding chi-square analysis. The correlation study was performed using Spearman
the phylogenetic relationships between different populations in addition two-tailed, to test the inter-trait and intra-trait variations. The
to establishing the hereditary link. In a novel way, if we consider the cusp results were interpreted as follows: no correlation if |r| < 0.3, correlation
number as the ‘allele’ and the right – left combination of the cusp type as if 0.3 < |r| < 0.5, and strong correlation if 0.5 < |r| < 1 [18]. The paired
the ‘phenotype’, then the possible phenotypes may be calculated similar t-test was applied to check the difference in the frequency distribution of
to the above genotypes calculation. For example, if there are two types of number of cusps in the study teeth between right and left side. The
premolars based on the number of cusps (2C and 3C) then the possible significance level was set to P < 0.05
right and left combinations are : 2(2 + 1)/2 = 3. i.e., 2C-2C; 3C-3C; and
2/3C-3/2C combinations. The phenotype is said to be symmetrical if Results
both right and left shows same number of cusps (Homocusped) and
asymmetrical if the number differs (Heterocusped). The goal of this present Intra-observer error
study was to propose a novel method applying the Hardy-Weinberg
equilibrium to study the distribution of cusp traits in teeth. To the best of The Cohen’s Kappa score for the intra-observer agreement for the
our knowledge, there are no previous studies in the literature that have quantification of cusps number trait in both the teeth was above 0.70.
applied the Hardy-Weinberg equilibrium to study the dental cup (Table 1)
phenotype variations in the Indian population.
Frequency distribution of number of cusps in mandibular 2nd premolar
Study population
Of the total individuals studied, around 60% had 2 cusp mandibular
The study population was a representative sample of an ethnic group 2nd premolars. The 2 cusp premolars were almost equally distributed in
traditionally from Gujarat, a state in the north western part of the Indian both the right and left side for both genders. The females had higher
peninsula, that speak Gujarati, an Indo-Aryan language. As the subjects frequency distribution of 2 cusp type than males; however the difference
were selected from the premier Government dental institute in the state of was not statistically significant. (Table 2) The males had higher frequency
Gujarat, they represented the population of diverse communities in
Gujarat. Table 1
Intra-observer error Cohen Kappa results.
Materials and method Non Metric-Trait Tooth (FDI system) Kappa score
(ASUDAS plaque)
The upper and lower dental models of 295 dental students in the age P/2 CUSP Mandibular right 2nd Premolar(# 35) 0.762
group of 19 to 23 years with a mean age of 21.03 years  1.31 were Mandibular left 2nd Premolar (# 45) 0.714
selected. Institutional ethical committee’s approval was obtained prior to HYPOCONE –CUSP 4 Maxillary right 2nd Molar(# 17) 0.792
Maxillary left 2nd Molar (# 27) 0.801
the start of the study. The inclusion criteria included those casts with good

2
J.P. Pillai, D. Patel FSIR 1 (2019) 100046

Table 2
Table showing the frequency distribution of the number of cusps in mandibular second premolars and in maxillary second molars and their association with gender.
Tooth (FDI system) No. of cusps Sex x2
Male Female Total

Count % Count % Count % Value df Sig*.

Mandibular right 2nd Premolar(# 35) 2 84 60.0% 95 61.3% 179 60.7% 0.051 1 0.821
3 56 40.0% 60 38.7% 116 39.3%
Mandibular left 2nd Premolar (# 45) 2 81 57.9% 96 61.9% 177 60.0% 0.510 0.475
3 59 42.1% 59 38.1% 118 40.0%
Maxillary right 2nd Molar(# 17) 3 48 34.3% 60 38.7% 108 36.6% 0.620 0.431
4 92 65.7% 95 61.3% 187 63.4%
Maxillary left 2nd Molar (# 27) 3 42 30.0% 64 41.3% 106 35.9% 4.073 0.044
4 98 70.0% 91 58.7% 189 64.1%
*
Significant at P < 0.05.

distribution of 3 cusp type than females, however the difference was not 71.2% were having bilateral symmetry in cusp number in both the teeth.
statistically significant. Overall there was only 14.7% significant correlation in the distribution of
symmetrical and asymmetrical cusp numbers in both the teeth.
Frequency distribution of number of cusps in maxillary 2nd molar
Paired t-test for right –left distribution of number of cusps
The 4 cusp type was the most predominant type in this tooth. More than
63% of the study models demonstrated 4 cusp type on both the sides. On the overall sample, there was no significant difference in the
(Table 2) The 4 cusp type 2nd molar was more predominant in male than distribution of cusp number in the antimeres. However, in male samples
female on both sides. The gender difference in the distribution of the number there was significant difference in the distribution of cusp numbers
of cusps was significant only on the left side (#27) and not on the right (#17). between #17 and #27. (Table 4)

Right-left correlation in the number of cusps Cross-tabulation of cusp phenotypes

Female had higher % of intra-trait correlation (r = 0.58, p < 0.05) in Table 5 shows the results of the inter-trait cusp phenotype
the number of cusps between #35 and #45 than the males (r = 0.45, combinations between mandibular 2nd premolar and maxillary 2nd
p < 0.01). The highest intra-trait correlation in the number of cusps was molar. It reveals a weak positive correlation (r = 0.147; p < 0.001) in the
found between #17 and #27 in males (r = 0.873, p < 0.01). A significant phenotype combinations between the two non- metric traits. In the
weak inter-trait correlation in the number of cusps was observed between overall sample, 46.2% showed ‘homocusped’ pattern in both the teeth.
#35 and #17 in female (r = 0.19; p < 0.05). The difference in the number
of cusps between right and left side among mandibular 2nd premolar and Novel application of Hardy-Weinberg equilibrium
maxillary 2nd molar was significant in the latter (Table 3).
The novelty in this study was that the right and left phenotype combi-
Symmetry/asymmetry in cusp number between sides nation of teeth was modelled as allele combination, just like in geneotype.
The cusp frequencies correspond to the allele frequency and the right –left
In the overall sample there was no significant difference in the number combination of the cusp number is considered as the genotype as in actual
of cusps between right and left side in the study teeth. Out of the total H-W equilibrium. Based on the observed frequencies of cusp phenotype, the
sample, 76.9% were having symmetrical distribution of the number of expected frequencies of the number of cusps and cusp phenotype combi-
cusps in mandibular 2nd premolar and 91.2% in maxillary 2nd molar and nations were calculated by applying the H-W equation in a novel method.

Table 3
Table showing the non parametric correlation between number of cusps between the teeth of interest in male and female subjects.
Correlation between teeth Male Female Total
(FDI system)
Correlation Coefficient (R) Sig*. Correlation Coefficient (R) Sig*. Correlation Coefficient (R) Sig*.

#45 & #35 0.455 0.000 0.577 0.000 0.518 0.000


#17 & #27 0.873 0.000 0.759 0.000 0.809 0.000
#45 & #17 0.190 0.024 0.305 0.000 0.252 0.000
#45 & #27 0.185 0.029 0.236 0.000 0.212 0.000
#35 & # 27 0.275 0.001 0.253 0.002 0.265 0.000
#35 & #17 0.342 0.000 0.187 0.020 0.261 0.000
*
Correlation is significant at the 0.05 level (2-tailed).

Table 4
Table showing the results of the independent t-test between the right and left teeth.
Pair Male Female Total

Mean S.D. Sig*. Mean S.D. Sig*. Mean S.D. Sig*.

#45 - #35 0.021 0.515 0.624 0.006 0.448 0.858 0.007 0.48 0.809
#17 - #27 0.042 0.236 0.033 0.025 0.34 0.347 0.007 0.297 0.696
*
Difference is significant at 0.05 level (2-tailed).

3
J.P. Pillai, D. Patel FSIR 1 (2019) 100046

Table 5
Table showing the descriptive statistics of the cross tabulation of the cusp phenotype (right –left combination) in mandibular 2nd premolar and maxillary 2nd molar.
Mandibular 2nd Premolar Maxillary 2nd Molar (Rt.- Lt.) Total Correlation Co-efficient x2 Sig*.
(Rt. - Lt.)
3C-3C 4C-4C 3C-4C 4C-3C

Count % Count % Count % Count % Count %

2C-2C 63 21.4 68 23.1 8 2.7 5 1.7 144 48.8 0.147 34.08 0.000
3C-3C 11 3.7 68 23.1 2 0.7 2 0.7 83 28.1
2C-3C 10 3.4 22 7.5 2 0.7 1 0.3 35 11.9
3C-2C 10 3.4 17 5.8 2 0.7 4 1.4 33 11.2
Total 94 31.9 175 59.3 14 4.7 12 4.1 295 100
*
Significant at P < 0.05.

Estimating the cusp frequencies in Premolar. There is a marked variation on in the frequency distribution of the cusp
phenotype traits in the observed data and the expected data. A reverse
trend is expected in the ‘heterocusped’ phenotype in both the teeth and the
variation was maximum in maxillary 2nd molar ( 0.37)(Chart 1 ).

Discussion

In Dental anthropology, the dental traits helps the anthropologists to


understand inter and intra-population dynamics and variations with due
considerations to the geographical, environmental and socio-economic
parameters [19]. The present study examined the expression and
distribution pattern of two dental morphological traits in the Gujarati
population, which represents the ancestral North Indian gene and appear
much more diverse than other South Asian populations [20]. The non-
metric traits that were included in the study were the cusp numbers in
mandibular second premolar and maxillary second molars. The frequency
distribution of cusp traits in mandibular second premolar was 60% and
40% among two cusp and three cusp types respectively and the maxillary
second molar was predominantly of four cusp type. There is hardly any
single study comparing the cusp patterns in these two teeth. Two studies
from Kerala, a state in Southern India have analysed the frequency
distribution mandibular second premolar according to cusp numbers
[21,22]. One study has shown the distribution of two cusp and three cusp
mandibular second premolar distributions in 52.8% and 44.4%
respectively [21]. On the contrary the other study by BabyTK et al has
reported mandibular second premolar with more than one lingual cusp in
52.92% of the subjects. [22]. Their study observed one buccal cusp and
two lingual cusps (3 cusp type) and three lingual cusps (4 cusp type). The
present study did not observe the 4 cusp type premolars in the Gujarati
samples. The Kerala population represents the Dravidian ancestry and
phylogenetic analysis has shown clear cut genetic demarcation from
Gujarati population [23]. However, the distribution of the cusp pattern in
mandibular 2nd premolars is almost similar in both the Kerala and the
Gujarati population. There was a predominance of two cusp type
premolar (54.6%) in a study on Korean population, which was similar to
the results of the present study (60%). The three cusp mandibular 2nd
premolar was higher in Korean (45.5%) than in Caucasian (26.3%)
population. [24] The Caucasoid population include groups such as West
Asians (Arabs), Europeans, Northern Africans, and south Asians who are
closely related and can be distinguished from Mongoloid or Negroid
population [25]. The two cusp form (66.3%) was far more common than
the three cusp form (25.4%) in Singaporean Chinese population which
was consistent with the present study [26]. However the distribution of
three cusp form was higher in the present Gujarati population than the
Chinese population. Also the asymmetry in the cusp numbers was higher
(23.1%) in the present study when compared to the Singaporean Chinese
population (8.3%). The Singaporean Chinese are the descendants of the
Mongoloid race in mainland China and they constitute the largest ethnic
group (76.2%) of the population of Singapore. The shovelling of incisors
which is a characteristic feature in Mongoloid race has been extensively
studied [27]. According to Ludwig (1957), there was greater variation in
the distribution of the two cusp and three cusp premolars in the
Mongoloid race [28]. In his study the cusp distribution in the Caucasoid

4
J.P. Pillai, D. Patel FSIR 1 (2019) 100046

Chart 1. Chart showing the difference in the observed and expected frequencies of the cusp number phenotypes in both the teeth.

race was very much similar to the findings of the present study. The Conclusion
predominant distribution of two cusp patterns over the three cusp pattern
premolar in the present study is consistent with the results from Kerala A novel approach of applying the Hardy-Weinberg principle in a cusp
(South Indian) [21], Korean [24], Singaporean Chinese [26] and phenotype analysis is reported here in a representative population of
Peshawar [29] populations. However, the studies from Iranian [30], Gujarat with diverse religious and community profiles. Such dental
Lahore [31], Dhaka [32], Jordanian [33] and Thai [34] populations have anthropological studies can provide valid information about the
revealed a reverse trend in the cusp trait distribution in mandibular variations of a particular trait in a given population. The authors propose
second premolar. The distribution of the three cusp pattern was dominant the smaller sample size, the possible genetic drift and the gene flow as
in theses populations. The Thai tribal population from Northern Thailand possible reasons for the variations in the observed phenotype frequency
showed the maximum distribution of 3 cusp premolars (86.6%). Though and the expected phenotype frequencies in the present sample with
this population has the features of Mongoloid race, the premolar cusp religious and caste diversity. However, large sample studies and
pattern predominantly featured three cusp form unlike the other inheritance studies on these traits need to be designed for further
mongoloid population like in Singapore Chinese and Koreans [34]. validation.
The gene flow because of migration and mixture with native populations
or the local evolution without genetic influence could be attributed as Financial disclosure
reasons for the variations in the tooth morphology [33]. Thus it is
noteworthy to mention that the expression of this trait reveals This research did not receive any specific grant from funding agencies
considerable variations in the human population. The second trait in the public, commercial, or not-for-profit sectors.
analysed in this study, the fourth cusp (Hypocone) in the maxillary second
molar is also thought to vary between populations. The distribution of this Declaration of Competing Interest
trait is around 64% and in the remaining 36% the second molar was of
three cusp type. The three cusp type was found in 15.8% of the Davangere None.
population in Karnataka, South India [35]. Genetic study has shown
difference in the Karnataka’s Dravidian population and the Gujarat’s Acknowledgements
Indo-Aryan population [23]. Studies have shown relationship between
the expression of the maxillary second molar hypocone and the first The authors wish to acknowledge Dr. Bhargav Patel, Assistant
molar hypocone and also with the fifth cusp (cusp of Carabeli) in Professor, IFS, GFSU for his guidance and technical support for this
maxillary first molar [35–38]. The present study compared the expression research and Dr. Asaithambi Balamurugan, Forensic Odontologist,
of the hypocone in the upper second molar with the lingual cusp trait in Chennai for providing the ASUDAS plaques. The author also acknowl-
the lower second premolars and found a significant weak positive inter- edges all the Dental students of GDCH Ahmedabad who volunteered to
trait correlation. The hypocone reduction or three cusp type maxillary provide their dental models for this study.
second molar was observed in around 29% of the Jordanian population
[36] which is around 36% in the present study. In consistent with the
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