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PDF Microbial Fermentation and Enzyme Technology 1St Edition Hrudayanath Thatoi Ebook Full Chapter
PDF Microbial Fermentation and Enzyme Technology 1St Edition Hrudayanath Thatoi Ebook Full Chapter
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MICROBIAL FERMENTATION
AND ENZYME TECHNOLOGY
Edited by
Hrudayanath Thatoi, Pradeep K. Das Mohapatra,
Sonali Mohapatra and Keshab C. Mondal
Microbial Fermentation
and Enzyme Technology
Microbial Fermentation
and Enzyme Technology
Edited by
Hrudayanath Thatoi
(Department of Biotechnology, North Orissa University)
Pradeep K. Das Mohapatra
(Department of Microbiology, Raiganj University)
Sonali Mohapatra
(Department of Biotechnology, College of Engineering
and Technology)
Keshab C. Mondal
(Department of Microbiology, Vidyasagar University)
CRC Press
Taylor & Francis Group
6000 Broken Sound Parkway NW, Suite 300
Boca Raton, FL 33487-2742
This book contains information obtained from authentic and highly regarded sources. Reasonable
efforts have been made to publish reliable data and information, but the author and publisher cannot
assume responsibility for the validity of all materials or the consequences of their use. The authors and
publishers have attempted to trace the copyright holders of all material reproduced in this publication
and apologize to copyright holders if permission to publish in this form has not been obtained. If any
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Trademark Notice: Product or corporate names may be trademarks or registered trademarks, and are
used only for identification and explanation without intent to infringe.
Preface........................................................................................................................vii
Editors..........................................................................................................................ix
Contributors.............................................................................................................. xiii
List of Abbreviations................................................................................................xvii
v
vi Contents
Index......................................................................................................................... 335
Preface
Microbes are the key players in converting the natural renewable substrates to value-
added products such as enzymes, organic acids, alcohols, polymers and more through
fermentation. It is a process of microbial biotechnology. Today, enhanced production
of economically important fermentation products has benefited from targeted genetic
engineering techniques to established industrial microbial strains. Enzymes are
products of living organisms and have been used in the industry for many years
due to their catalytic activities, repeated usability, etc. Enzyme has a broad range of
applications from food to detergents. Most enzymes are commercially available and
used to enhance the product quality in food, detergents, leather, paper, cosmetics, and
pharmaceuticals. The present book is dealing with 20 nos of articles covering with
many frontier areas of microbial fermentation and enzyme technology. To start with
a lucid introduction on fermentation and enzyme science, adding with an overview
on molecular structure, genetic architecture and biotechnological perspectives
of α-amylase. A well narration is presented on the role of microbial enzymes in
food industry, the importance of fermented food in healthcare sectors and also the
enzymatic contribution in functional foods and food products. The applications
of immobilized cells and enzymes have also been well documented in the present
book. Production of antioxidants and cholesterol lowering process were discussed.
Relevance of microbial enzymes in textile industries was also presented. Applications
of microbes in organophosphate pesticide degradation and the importance of enzymes
in fuel biotechnology is also noteworthy. The book also illuminates about the
enzymatic hydrolysis of lignocellulosic biomass using engineered microorganisms
and concomitant production of ethanol.
The book is written in a simple and clear text with a number of figures, tables, and
illustrations that will help the reader to better understand the subject matter. This vol-
ume is the collective efforts of several researchers, scientists, graduate students, and
postdoctoral fellows across the world who are well known in their respective areas of
specialization. This book will be a useful reference resource on fermentation, enzyme
technology, food microbiology, and biochemistry, biotechnology for researchers,
teachers and students. We express our gratitude to all of the contributing authors who
helped us enormously with their timely contributions in this volume. We are also
grateful to the reviewers who have voluntarily agreed and spared their precious time
in critically reviewing the manuscript.
vii
Editors
ix
x Editors
xiii
xiv Contributors
2G second generation
ABTS 2,2-azino-bis (3-ethylbenzothiazoline-6-sulfonic acid)
AE auxiliary enzymes
Ala alanine
Arg arginine
Asn asparagine
BG β–glucosidases
BP British Petroleum
BSH bile salt hydrolase
BTU British thermal units
CAGR compound annual growth rate
CastP computed atlas of surface topography of proteins
CAZy carbohydrate-active enzymes
CAZy carbohydrate-active enzymes database
CBH cellobiohydrolase
CBM calcium binding module
CBiM carbohydrate binding module
CBP consolidated bioprocessing
CCD central composite design
CD catalytic domain
CDH cellobiose dehydrogenase
CE carbohydrate esterase
CBH cellobiohydrolase
Cel5A Cellulase5A
Cel7A Cellulase7A
Cel7B Cellulase7B
CFU colony forming unit
CHD coronary heart disease
CMC carboxy methyl cellulose
CO2 carbon dioxide
Coh cohesin
CpHMD constant pH molecular dynamics
CVD cardiovascular diseases
Cys cystine
DAD diode array detector
DDT dichlorodiphenyltrichloroethane
DM dry matter
Doc dockerin
DP degree of polymerization
DPPH 1,1-diphenyl-2-picrylhydrazyl
EC Enzyme Commission
xvii
xviii List of Abbreviations
NP nanoparticles
NPD nitrogen and phosphorus detector
Ntn N-terminal nucleophilic hydrolases
NVC non-volatile compounds
OP organophosphate
OPH organophosphorus hydrolase
PA polyamine
PAH polyaromatic hydrocarbon
PAN polyacrylonitrile
PCB polychlorinated biphenyls
PDB Protein Data Bank
PET polyethylene terephthalate
PG polygalacturonan
PHI phosphohexoisomerase
PL polysaccharide lyase
PPE phosphopentose epimerase
PPI phosphopentose isomerase
Q quadrupole
QqQ triplequadrupole
RSCU relative synonymous codon usage
SSF simultaneous saccharification and fermentation
SAXS small-angle X-ray scattering
Ser serine
SHF separate hydrolysis and fermentation
SiNP silver nanoparticles
SLH surface layer homology
SmF submerged fermentation
SOPMA self-optimized prediction method with alignment
SSCF simultaneous saccharification and co-fermentation
SSF simultaneous saccharification and fermentation
SoSF solid-state fermentation
SSFF simultaneous saccharification, filtration and fermentation
TCP 3, 5, 6-trichloro-2-pyridinol
TGase transglutaminase
Thr threonine
TIMT triosephosphate isomerase
TOF time of flight
Trp trypsin
Tyr tyrosine
US United States
Val valine
XDH xylitol dehydrogenase
XK xylulokinase
Xmod X-module
XR xylose reductase
1
Introduction of Fermentation
and Enzyme Science
CONTENTS
1.1 Introduction.......................................................................................................... 1
1.2 Basic Principle of Fermentation.......................................................................... 3
1.3 Biochemical Process of Fermentation................................................................. 4
1.4 Fermentation Methodology in Terms of Enzyme Production............................. 6
1.5 Factors Influencing Fermentation and Enzymes................................................. 7
1.6 Fermentation and Its Industrial Applications in Enzyme Science...................... 8
1.7 Concluding Remarks and Future Trends............................................................. 9
1.8 Conclusion......................................................................................................... 10
References................................................................................................................... 10
1.1 Introduction
Today, fermentation products profit from industrial microbial strains which are estab-
lished by targeted genetic engineering techniques. For many years, the process of
fermentation of foods was done for the production of alcoholic beverages through
barley and grapes (Campbell-Platt 1994). The environmental conditions and micro-
bial strain are employed in the development of by-product or end products. Due to
their catalytic activities, enzymes have been used in the industry for many years, and
their actions are dependent on substrate, pH, inhibitors and temperature. Each process
should be optimized. In the fabrication of over 500 profitable products, enzymes are
used (William and Akiko 2004). They have an extensive variety of applications in
diverse industrial fields.
Many commercial products are produced by a process in which enzymes are used.
There are 500 products in this category (Johannes and Zhao 2006). For thousands of
years, enzymes have been used to produce cheese, yoghurt, beer and wine (food and
beverages). Production of alcohol (ethanol) and carbon dioxide gas is done by break-
down of sugar by the enzymes in yeast:
1
2 Microbial Fermentation and Enzyme Technology
• Mechanical stress
• Extreme temperature condion
Downstream • Composon of freezing and dry media
process • Oxygen stress
Glucose
ATP
ADP
GLUCOSE 6-
PHOSPHATE
FRUCTOSE 6-PHOSPHATE
ATP
ADP
2 NADH + H+
3 DIPHOSPHOGLYCERIC ACID
4 ADP
4 ATP
2 PYRUVIC ACID
2 CO2 2 ACETYALDEHYDE
2 NADH + H+
2 NAD+
2 ETHANOL
condition and it is found in the higher animal’s cells and a number of microorganisms.
Glycolysis is enzymes that are used in lactic acid and alcoholic fermentation. In alco-
holic fermentation, such as occurs in brewer’s yeast and some bacteria, the production
of lactic acid is bypassed, and the glucose molecule is degraded to two molecules of
the two-carbon alcohol, ethanol, and to two molecules of carbon dioxide. Interest
in the process of fermentation has continued through the ages, and much of modern
biochemistry, especially enzyme studies, has emerged directly from early studies on
the fermentation process.
Selected fungi and bacteria are used for the production of enzymes and grown
under well defined fermentation conditions. At some stage in which microbial growth
occurs, the by-products are produced (metabolites).
Still, biochemical changes as shown by Figure 1.3 (cocoaphilippinesblog.blogspot.
com/2016/10/cacao-beans-fermentation-process.html) and the environmental condi-
tions such as pH, occurrence of oxygen, and nutrients also affect the by-product for-
mation (Shuler and Kargi 2008).
“Microbial fermentation has been used for such purposes for many com-
mercial products and enables novel techniques to support sustainable manu-
facturing and screening for microorganisms which produce novel enzymes,
monitoring enzyme production in fermenters and following enzyme recov-
ery during purification processes, requires the use of rapid and specific assay
procedures and well defined substrates.”
Carbon
Compost
Separator Methane
Anaerobic
Feedstock Digester Gas Digester Gas
digester
Water
Process Input or Output
Process Step
Microorganism
Lactic acid bacteria
Filamentous fungi
and Yeast
Coliforms air
(Contaminated)
Fermentation Substrate
Temperature, Time Carbohydrates,
Vitamins, Proteins,
Feed water ratio Fibers
shave rates in the fermenter, dissolved O2, dissolved CO2, and equipped system (e.g.
batch, fed-batch, continuous). “Variation in these factors may affect: the organoleptic
assets of the product (appearances, taste, smell, and texture), the generation of toxins;
nutritional quality; and other physico-chemical properties, the rate of fermentation;
the product spectrum and yield.”
Processing along with cereals improvement in addition to other plant products
require the use of enzymes that is originated from microbes and plants. “In the former
case, enzymes are simply extracted from the plant material and subjected to purifica-
tion and stabilization processes, or are used in the plant material as part of the pro-
cessing conditions (e.g. malt).” The applications of fermentation have been rapidly
branching in different food and pharmaceuticals industries and in the field of biofuels
energy has gained more considerable awareness (Johannes and Zhao 2006).
The basic fermentation principle has been relevant to the manufacture of biofuels,
biochemicals and biomolecules through the highly developed procedure of genetic
engineering (Choct 2006). According to a research report from Austrian Federal
Environment Agency (Clouthier and Pelletier 2012), about 158 enzymes were used
in food industry, 64 enzymes in technical application.
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3.
(a.) Raising the legal tender limit of silver to, say, £10.
(b.) Issuing the 20s. notes based on silver, which shall be
legal tender.
(c.) Retirement, gradual or otherwise, of the 10s. gold
pieces, and substitution of paper based on silver.
MONGOLIA.
MONOPOLIES.
MONTENEGRO.
MOROS, The.
MUKDEN.
MUNICIPAL GOVERNMENTS:
Institution in Cuba.
MUNICIPAL GOVERNMENTS:
Institution in the Philippines.
NASHVILLE EXPOSITION.
NATAL.
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