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Phytopathogenic
Bacteria and
Plant Diseases
B.S. THIND
Phytopathogenic Bacteria
and Plant Diseases
Phytopathogenic Bacteria
and Plant Diseases
B.S. Thind
CRC Press
Taylor & Francis Group
6000 Broken Sound Parkway NW, Suite 300
Boca Raton, FL 33487-2742
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intent to infringe.
Dedicated to the memory of my mentor and teacher late Dr. M. M. Payak, Ex-Head,
Division of Plant Pathology, Indian Agricultural Research Institute, New Delhi, who
guided and trained me in the discipline of Plant Pathology and Plant Bacteriology.
Contents
Abbreviations of Bacterial Genera Used in This Book .............................................................................................................xix
Preface........................................................................................................................................................................................xxi
Acknowledgments ....................................................................................................................................................................xxiii
Author ....................................................................................................................................................................................... xxv
vii
viii Contents
xix
Preface
The study of phytopathogenic bacteria and the plant diseases into a book. Therefore, the book entitled, Phytopathogenic
caused by them is of utmost importance to mankind as these Bacteria and Plant Diseases is proposed.
diseases cause huge economic losses. Some of these diseases, There are 7 chapters included in the book. Chapter 1
such as bacterial wilt of solanaceous plants, soft rot of fleshy includes economic importance of phytopathogenic bacteria
vegetables and fruits, crown gall of plants, citrus canker, cit- and historical review of phytobacteriology. Chapter 2 contains
rus huanglongbing, fire blight of pome fruit trees, and bac- basic information about the bacterial cell. Chapter 3 deals
terial blight of rice, are of international importance. Plant with diagnosis of bacterial diseases of plants. The up-to-
diseases caused by phytopathogenic bacteria are also disas- date classification of plant pathogenic bacteria is given in
trous because many of these diseases cannot be effectively Chapter 4. The bacterial names included are based on the
controlled due to the lack of effective chemicals. Moreover, information published in International Journal of Systematic
the secondary spread of these diseases is very fast compared Bacteriology (IJSB), International Journal of Systematic and
to fungal diseases. Evolutionary Microbiology (IJSEM), and related journals up
The classification and nomenclature of bacteria has under- to December issues of 2018, and supplemented with the infor-
gone a sea change during the last three decades. The sequence mation given in Names of Plant Pathogenic Bacteria, 1864–
analysis of highly conserved regions of the bacterial genome 2004 prepared by Young et al. (2004), Comprehensive List of
such as small sub unit rRNA gene has provided very valuable Names of Plant Pathogenic Bacteria, 1980–2007 prepared
information concerning numerous taxonomic changes and by Bull et al. (2010), List of New Names of Plant Pathogenic
realignment of different taxonomic groups. The sequencing Bacteria (2008–2010) prepared by Bull et al. (2012), and List
of genomes of many phytopathogenic bacteria has certainly of New Names of Plant Pathogenic Bacteria (2011–2012)
stabilized their ever fluctuating nomenclature and taxon- prepared by Bull et al. (2014). Chapter 5 deals with informa-
omy. Since the 1st edition of Bergey’s Manual of Systematic tion on molecular mechanisms of phytopathogenic bacteria
Bacteriology was published in 1984, the number of published involved in virulence and pathogenesis. In Chapter 6, an alto-
bacterial species has more than tripled, i.e., 390 new genera gether a new topic, i.e., plants acting as carriers of human
and 2,200 new species have been described. Many new gen- enteric bacterial pathogens has been included. It needs an
era containing plant pathogenic bacteria have been recog- immediate attention of the scientists to decontaminate plant
nized, and the rearrangement of the species among the genera and plant products used for human consumption.
has also occurred. During 1970s, there were only 6 genera of Chapter 7 contains descriptions of specific bacterial plant
bacteria that contained plant pathogenic bacteria, but now this diseases. Although it was not possible to include all the bac-
number is 53, including 3 candidatus categories. terial plant diseases, 70 specific diseases, including eco-
In contrast to direct monetary losses and other harmful nomically important diseases of international importance
effects of phytopathogenic bacteria, they have a great deal and representative diseases of different crops and regions,
of commercial value. They are used for the commercial have been described. In order to make discussion of phyto-
production of many industrial products as well as tools for bacteriology even more effective, full-color photographs of
various scientific studies. Their use in industrial fermenta- symptoms of most of these diseases are given. Information
tion, production of antibiotics, xanthan gums, and polysac- published in plant pathological and related biological journals
charides such as curdlans are the important applications. until December issues of 2018 have been included in the book.
Production of pectin-degrading enzymes produced by The abbreviations of names of bacterial genera, included
soft-rotting erwinias and restriction nucleases produced in the book, are given on page xix. Because a majority of
by Agrobacterium and Xanthomonas species are other the genera included in this book start with the same letter,
notable examples of their commercial use. Gluconobacter a deviation has been made from the tradition of abbreviat-
species have various biotechnological applications. Their ing the genus name by using only the first letter of the genus.
biotransformed strains are used for the production of rare In Chapter 7, the names of causal agents of different diseases
and special sugars like l-ribose and miglitol, both very are given along with author citations. In author citations,
promising pharmaceutical lead molecules. Ag. tumefaciens when there are more than two authors, the name of the first
(the causal agent of crown gall of many plants), apart being author is given followed by “et al.” One or two and, in a few
a plant pathogen, is one of the best known vehicles for gene cases, up to three recent synonyms of each causal organism
transfer and most useful genetic engineering tool for devel- are also given. In the corresponding references, the names of
oping transgenics. up to five authors are given, followed by “et al.” when there
Our knowledge of phytopathogenic bacteria, plant diseases are additional authors. The names of all the authors/editors
caused by them, host-pathogen interactions, molecular mech- are given for book references.
anisms involved in virulence and pathogenesis, and disease At the undergraduate level, students have limited expo-
management strategies developed has now reached a stage sure to phytobacteriology. However, at the post-graduate
where it would be useful to integrate the concepts and ideas level, students are taught phytobacteriology in detail. State
xxi
xxii Preface
agricultural universities and the universities teaching biologi- in the preparation of this manuscript, I have referred to a num-
cal sciences have courses dealing exclusively with phytobac- ber of publications, and I would like to acknowledge all the
teriology. PhD students specializing in phytobacteriology are authors of these excellent and valuable publications/articles.
taught advanced courses. This book will serve as a textbook There might be some errors, mistakes, and shortcomings
for advanced undergraduate and post-graduate students and in this publication. I will greatly appreciate the healthy criti-
also as a reference book for research workers engaged in the cism and suggestions for the improvement of this publication
discipline of plant pathology and phytobacteriology. in future.
I am indebted to numerous colleagues and friends for sug-
gestions made during the preparation of the manuscript. Also, B.S. Thind
Acknowledgments
It is my pleasure to acknowledge the help of all those who Crop Protection Division, Central Institute for Subtropical
contributed in the preparation of this publication. At the Horticulture, Lucknow, for lending me the photographs of the
outset, I am highly thankful to my friend and ex-colleague, symptoms of different plant diseases.
Dr. G.S. Miglani, formerly Professor of Genetics, Punjab I am also indebted to Dr. N.W. Schaad, Agricultural
Agricultural University (PAU), Ludhiana, for his frequent Research Service-United States Department of Agriculture,
counseling and help. I am also grateful to my friend and ex- Foreign Disease-Weed Science Research Unit, Ft. Detrick,
colleague, Dr. R.S. Kahlon, Ex-Prof.-cum-Head, Department MD, USA, for his expert advice and frequent counseling.
of Microbiology, PAU, Ludhiana, for reviewing Chapter 2, My sincere thanks are also due to Professor Ian K. Toth,
“Bacterial cell,” and making critical suggestions. The James Hutton Institute Invergowrie, Dundee, DD2 5DA,
I owe my special thanks to Dr. Parminder Singh, Assistant UK; Dr. N.W. Schaad; Dr. M.K. Mondal, Sr. Scientist, Division
Plant Pathologist, PAU, Ludhiana, who helped me immensely of Plant Pathology, I. A. R. I., New Delhi; Dr. R. Sridhar, ex-
in downloading a large number of pictures and photographs Head, Department of Plant Pathology, Central Rice Research
from the Internet and also for editing and arranging these Institute, Cuttack; and Dr. R.P. Maharshi for agreeing to
photographs. His help in typing and setting the text material act as referees/reviewers for this book. The frequent coun-
is also acknowledged. I am also indebted to Dr. M.S. Hujan, seling and help rendered by Dr. Paramjit Singh Randhawa,
Assistant Professor of Plant Pathology, PAU, Ludhiana, for President, California Plant and Seed Labs, USA, is thankfully
going through Chapter 6, “Plants as carriers of human enteric acknowledged.
bacterial pathogens,” and making useful suggestions. I owe a special gratitude to my wife, Mrs. Ravinder Kaur
The generous help rendered by my ex-colleagues and Thind for her continuous and untiring encouragement during
friends, namely, Dr. Bipin Kumar Sharma, Ex-Director, this entire period and also for her help in the preparation of
PAU Regional Research Station, Kapurthalla; Dr. Surinder subject index. My sincere thanks also go to my ex-colleagues
Kumar Thind, Prof. of Plant Protection, PAU, Ludhiana; and friends who helped me directly or indirectly in the prep-
Dr. Kuldip Singh, Ex-Senior Molecular Geneticist, PAU, aration of this manuscript, but whose names have not been
Ludhiana; Dr. R.P. Maharshi, Ex-Head, Department of Plant mentioned here.
Pathology, SKN College of Agriculture, Jobner, Rajasthan;
and the late Dr. Ram Kishun, ex-Principal Scientist and Head, B.S. Thind
xxiii
Author
Dr. B.S. Thind retired as and has guided 10 PhD and 13 MSc students. All these stu-
Professor-cum-Head, Depa- dents conducted the research work on bacterial diseases of
rtment of Plant Pathology, different crops.
Punjab Agricultural University Dr. Thind attended the 7th, 8th, and 9th International
(PAU), Ludhiana, India after Conferences on Plant Pathogenic Bacteria held in Budapest
serving the university for in 1989, in Versailles in 1992, and in Chennai in 1996,
32 years. After retirement, he respectively. As member of the National Organizing
became an Emeritus Scientist Committee, he organized the 9th International Conference
(Indian Council of Agricultural on Plant Pathogenic Bacteria held in Chennai, India dur-
Research [ICAR], New Delhi) ing August 26–29, 1996 and also chaired a session. He
in the Department of Plant also attended I, II, and III International Symposia of Plant
Pathology, PAU, Ludhiana Pathology and International Conference in New Delhi
from July 2003 to July 2005 in 1967, 1971, 1981, and 1997, respectively; the Global
on the scheme entitled, Conference in Plant Pathology in Udaipur in 1995 and
“Development, mass culturing, and formulation of effective and Asian Biotechnology Rice Network Workshop at Ludhiana
economical biocontrol agents for the control of Xanthomonas in 1998; and 25 national and eight zonal meetings of differ-
oryzae pv. oryzae, the causal agent of bacterial blight of rice.” ent professional societies.
Dr. Thind completed his PhD in Plant Pathology from Dr. Thind has been a member of Indian Phytopathological
Indian Agricultural Research Institute, New Delhi in 1970. Society, New Delhi, since 1966 and is now designated as a
His first encounter with plant bacteriology or phytobacte- life member. He has been a member of the Indian Society of
riology sub discipline occurred during his PhD program Mycology and Plant Pathology, Udaipur, since 1976, of the
when he worked on bacterial stalk rot of maize caused by Indian Society of Plant Pathologists, Ludhiana, since 1984,
Dickeya zeae. To this day, he continues to work on bacterial and of the Indian Science Congress Association, Kolkata,
diseases of plants and has made significant contributions in since 1992.
this field. Dr. Thind has served as paper setter and external examiner
He has been a principal investigator of an Indian Council of four universities and Agricultural Scientists’ Recruitment
of Agricultural Research (ICAR)-funded research scheme Board, New Delhi; as an expert of selection committees for
entitled, “Biological control of bacterial blight, sheath blight, the post of Associate Professors/Professors and as an external
sheath rot, and brown leaf spot of rice,” two ICAR-funded examiner of PhD and MSc students of different universities;
research schemes entitled, “Perpetuation, variability, and and as reviewer/referee of various national and international
control of X. oryzae pv. oryzae, the causal agent of bacterial research journals.
blight of rice,” and “Detection and control of phytopathogenic He has also published 127 research papers in scientific
bacteria from cowpea and mung bean seeds.” journals of international and national repute, has authored
He has also taught many courses of plant pathology to one manual entitled, Plant Bacteriology and one textbook
undergraduate and post-graduate students, including 600 entitled, Phytopathogenic Procaryotes and Plant Diseases
series advanced courses of plant bacteriology to PhD students published by Scientific Publishers (India).
xxv
Section I
General Aspects
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