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Journal of Mammalogy, 96(6):1255–1274, 2015

DOI:10.1093/jmammal/gyv135
Published online September 24, 2015

Molecular systematic revision of tree bats (Lasiurini): doubling the native


mammals of the Hawaiian Islands
Amy B. Baird,* Janet K. Braun, Michael A. Mares, Juan Carlos Morales, John C. Patton, Christina
Q. Tran, and John W. Bickham
Department of Natural Sciences, University of Houston – Downtown, 1 Main St., Houston, TX 77002, USA (ABB, CQT)
Sam Noble Museum, University of Oklahoma, 2401 Chautauqua Ave., Norman, OK 73072, USA (JKB)
Sam Noble Museum and Department of Biology, University of Oklahoma, 2401 Chautauqua Ave., Norman, OK 73072, USA (MAM)
Global Footprint Network, 312 Clay St., Oakland, CA 94607, USA (JCM)

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Department of Forestry and Natural Resources, Purdue University, West Lafayette, IN 47907, USA (JCP, JWB)
Battelle Memorial Institute, 11767 Katy Freeway, Suite 340, Houston, TX 77079, USA (JWB)
* Correspondent: bairda@uhd.edu

This study reports the phylogenetic relationships of 13 species of lasiurine bats using 4 loci from mitochondrial
and Y-chromosomal DNA. Our results support a sister taxon relationship between the red and hoary bats, with
the yellow bats being more distantly related. Several taxonomic revisions are suggested based on the results of
this study. We support the recognition of 3 separate genera: Lasiurus (red bats), Dasypterus (yellow bats), and
Aeorestes (hoary bats, including A. egregius which groups more closely to the hoary bats than its traditional
placement with the red bats). We recognize L. frantzii as a distinct species and recognize L. blossevillii salinae as
a subspecies rather than species. We elevate 3 previously recognized subspecies of A. cinereus to specific status.
The phylogeography of the endangered Hawaiian hoary bat is studied in detail, and hoary bats are found to have
undergone multiple invasions of the Hawaiian Islands from North America over its evolutionary history. We also
report the presence of 2 species of Aeorestes on the Hawaiian Islands where only one previously had been known.

En este estudio reportamos las relaciones filogenéticas de 13 especies de Lasiurini, utilizando cuatro loci del ADN
mitocondrial y del cromosoma Y. Los resultados apoyan una relación filial cercana entre los murciélagos canosos
y los murciélagos rojos, con los murciélagos amarillos un tanto más distantes. Los resultados también sugieren
varias revisiones taxonómicas. Nosotros reconocemos tres géneros diferentes como sigue: Lasiurus (murciélagos
rojos), Dasypterus (murciélagos amarillos), y Aeorestes (murciélagos canosos o cenizos). Reconocemos a
L. frantzii como especie diferente, y a L. blossevillii salinae a nivel subespecífico en vez de específico. También
elevamos a nivel específico las tres subespecies de A. cinereus previamente reconocidas. Hemos estudiado en
detalle la filogeografía del los murciélagos canosos de Hawaii en peligro de extinción, y encontramos que durante
su historia evolutiva los murciélagos canosos habian invadido las islas hawaianas en múltiples ocasiones desde
Norte América. También en este estudio reconocemos las presencia de dos especies de Aeorestes en las islas
hawaianas, las cuales anteriormente se había reportado como solo una.

Key words: Aeorestes, Dasypterus, Hawaiian hoary bat, Lasiurus, molecular phylogenetics, tree bats

© 2015 American Society of Mammalogists, www.mammalogy.org

The tribe Lasiurini, currently comprised of a single genus, to possibly warrant their own subfamily. The monophyly and
Lasiurus, is a diverse assemblage of vespertilionid bats distrib- distinction of Lasiurini was confirmed by Hoofer and Van Den
uted in mainland North and South America and the Caribbean, Bussche (2003) in their study of vespertilionid molecular phy-
Hawaiian, and Galapagos Islands. These bats possess many logenetics based on mtDNA and by Roehrs et al. (2010) in their
unique morphological characters in comparison to other ves- study of vespertilionine phylogenetics based on mtDNA and
pertilionids and were therefore placed in their own tribe by nuclear DNA. Despite the consistent findings of monophyly,
Tate (1942), who considered them to be sufficiently distinct as historically the taxonomy of Lasiurus has undergone significant

1255
1256 JOURNAL OF MAMMALOGY

changes and many aspects still are debated. For the purposes of red, and hoary bats. Mitochondrial and nuclear DNA sequences
this study, we follow Wilson and Reeder (2005), who consider confirmed the monophyly of the genus, as well as each species
the genus to contain 17 species, 4 of which are divided into group (Hoofer and Van Den Bussche 2003; Roehrs et al. 2010).
multiple subspecies. Lasiurus is considered by some authors Like the aforementioned allozyme studies, Hoofer and Van Den
(including Wilson and Reeder [2005]) to be divided into 2 sub- Bussche (2003) found an essentially unresolved trichotomy
genera (previously defined by Tate [1942] as distinct genera): among the 3 morphologically distinctive groups using mtDNA.
Lasiurus for the red and hoary bats and Dasypterus for the yel- The authors note that because of the unresolved relationships
low bats. This classification has been disputed by some authors among the 3 species groups, their data could neither support nor
(e.g., Handley 1960; Baker et al. 1988). Baker et al. (1988) refute the validity of Dasypterus sensu Tate (1942). Similarly,
rejected the subgeneric classification because the patterns of using a combination of mtDNA and nuclear sequences, Roehrs
genetic divergence they found were inconsistent with such et al. (2010) could not resolve the placement of the yellow bats
a classification. They noted that there are 3 distinct lineages relative to the red and hoary bat.
within the genus: the red, yellow, and hoary bats. They pro- Some relationships within Lasiurus have been resolved

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posed that these 3 groups should either be considered a single using various genetic markers. The most complete and well-
genus with no subgenera, or that there should be 3 subgenera, resolved phylogeny was derived from mtDNA restriction-site
1 for each lineage. maps (Morales and Bickham 1995). The best-supported tree
The red bats include: L. blossevillii (South America, west- recovered was: (yellow bats, (red bats, hoary bats)). Within
ern North America, Trinidad and Tobago, Galapagos) with 4 the yellow bats, the relationships were as follows: (L. xanthi-
subspecies, L. borealis (eastern United States), L. pfeifferi nus, (L. insularis, (L. intermedius, L. ega))). The red bat rela-
(Cuba), L. degelidus (Jamaica), L. minor (Hispaniola, Puerto tionship found was: (L. blossevillii, ((L. borealis, (L. pfeifferi,
Rico, Bahamas), L. atratus (northeastern South America), L. seminolus)))). All 3 subspecies of hoary bats were studied,
L. castaneus (Panama, Costa Rica), L. ebenus (southeastern but the relationships among them were not well resolved.
Brazil), L. egregius (Brazil, French Guyana, Panama), L. sali- Allozymes (Baker et al. 1988) were not useful in revealing
nae (Argentina), L. seminolus (southern United States), and structure within the genus. Hall and Jones (1961) proposed a
L. varius (southern Argentina, Chile). The hoary bats include phylogeny based on morphological characters that disagrees
a single species (L. cinereus) with 3 subspecies (1 each occur- with the mtDNA phylogeny (Morales and Bickham 1995),
ring in Hawaii, North America, and South America). However, in that the red and yellow bats are sister taxa. It also dif-
5 subspecies, rather than 1, were recognized by Gardner and fers from the tree recovered by Morales and Bickham (1995)
Handley (2007) in South America. The yellow bats include: in the structure within the red bats, as it places L. borealis
L. ega (southern Texas to South America and Trinidad) with 4 and L. seminolus in the same clade (along with L. castaneus
and possibly 5 subspecies, L. insularis (Cuba), L. intermedius and L. egregius), while L. pfeifferi groups with L. degelidus,
(Central America to southern United States) with 2 subspecies, L. minor, and L. brachyotis (which is now a subspecies of
and L. xanthinus (Mexico to southwestern United States). L. blossevillii). Because these studies used different combi-
Early morphological studies failed to distinguish many of nations of taxa and recovered different relationships, a com-
these species, especially within the red bats (Koopman and plete understanding of the evolutionary history of Lasiurus
McCracken 1998). Although not all authors agree on the tax- still is lacking.
onomy described above (e.g., Koopman and McCracken 1998), Lasiurus cinereus is unique among all extant bats in that
we use these species designations as a hypothesis for testing it has been able to successfully establish populations on the
where species boundaries lie in this genus. Hawaiian Islands. Currently, the Hawaiian populations com-
Intrageneric relationships of Lasiurus, although having pose a distinct subspecies, L. cinereus semotus. The relation-
been studied with morphology (Hall and Jones 1961), allo- ship of this subspecies to the North (L. c. cinereus) and South
zymes (Baker et al. 1988), chromosomes (Baker and Patton American (L. c. villosissimus) subspecies has not been well
1967; Bickham 1987), mtDNA restriction sites (Morales and studied. The only genetic data addressing its relationship to
Bickham 1995), and mtDNA and nuclear DNA sequences (in other L. cinereus came from mtDNA restriction data (Morales
the context of overall Vespertilionidae phylogenetics—Hoofer and Bickham 1995). In that study, the authors found that there
and Van Den Bussche 2003; Roehrs et al. 2010), remain unre- was very low support for relationships within L. cinereus, and
solved. Hall and Jones (1961) hypothesized that the hoary bats, their results showed 2 weakly supported clades within the spe-
due to their unique morphology, were the first to diverge in the cies: one that placed Hawaiian L. c. semotus within a clade of
evolutionary history of this group and the yellow and red bats North American L. c. cinereus and another that placed South
are morphologically most similar to one another. Restriction American L. c. villosissimus within a different clade of North
fragment analysis of mtDNA ribosomal genes (Morales and American L. c. cinereus. The low resolution of this study is
Bickham 1995) placed the hoary and red bats as sister taxa not unexpected given the relatively few informative charac-
with some clustering algorithms; however, other clustering ters that restriction mapping supplies. We aim to increase this
algorithms placed the yellow and red bats as sister taxa, thus resolution with DNA sequence data and address the question
leaving the question unresolved. Allozyme data (Baker et al. of whether the Hawaiian populations originated from North or
1988) showed an unresolved trichotomy between the yellow, South America.
BAIRD ET AL.—MOLECULAR SYSTEMATICS OF TREE BATS 1257

The morphology and behavior of the Hawaiian hoary bats likelihood analysis using GARLI version 0.96 (Zwickl 2006)
have been studied. They exhibit a significant reduction in body and a Bayesian analysis using MrBayes version 3.1.2 (Ronquist
size (Jacobs 1996—although we note that this author only used and Huelsenbeck 2003). Each Bayesian analysis was per-
specimens from the Island of Hawaii), have a generalized diet formed using 5 million generations with a sample frequency of
(Whitaker and Tomich 1983), and some individuals roost in 1,000 generations. The program Tracer version 1.5 (Rambaut
caves (Fujioka and Gon 1988), whereas all mainland L. cinereus and Drummond 2009) was used to determine that the burn-in
are known to be obligate tree roosters. It currently is unknown selected (25%) was appropriate and that convergence had been
when L. c. semotus arrived in Hawaii and began to differentiate reached. Posterior probabilities were obtained by MrBayes and
from mainland subspecies. These morphological and behav- 100 bootstrap replicates were performed on the maximum like-
ioral differences from other L. cinereus make establishing an lihood data with GARLI. Trees were visualized using FigTree
accurate taxonomic and phylogeographic history of this sub- version 1.4.0 (Rambaut 2012).
species important for conservation purposes due to its listing as Additionally, we used a species tree approach implemented
endangered under the United States Endangered Species Act, in *BEAST version 1.7.5 (Drummond et al. 2012) to examine

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as well as to enhance our understanding of Hawaiian faunal the overall relationships among the major lineages of Lasiurus.
history. For this analysis, we used all individuals within a species that
The goal of this study is to produce a well-resolved phylog- had been sequenced for all 4 loci in order to minimize miss-
eny of interspecies and subspecies relationships of Lasiurus ing data, which can be problematic in model-based phylogeny
and to present a timeline for the diversification of the major reconstruction (Lemmon et al. 2009). For some species, we did
clades within the genus. In particular, we aim to resolve the not have representatives sampled at all loci. These included
existing trichotomy among the red, hoary, and yellow bats and L. cinereus from Hawaii (no DBY sequenced), L. insularis (no
we examine the validity of certain species described based on DBY), L. intermedius (no Cytb), and another L. intermedius
genetic markers. Additionally, we examine the phylogeogra- sample with no DBY. L. salinae was left out of the analysis
phy and taxonomic status of the Hawaiian hoary bat. Finally, because it had only been sequenced for 1 locus (ND1). The
we propose a new taxonomic arrangement of the group with models identified by jModelTest above were implemented for
monophyletic taxa arranged hierarchically according to their each locus independently. We unlinked the DBY tree model
phylogenetic relationships and genetic divergence. from the mtDNA loci (which remained linked to each other
because of the lack of recombination among mtDNA loci). We
used a strict clock model and default priors. The species tree
Materials and Methods prior was set to species tree: Yule process. The MCMC was run
Sampling.—A total of 109 individuals was examined for 100,000,000 generations and the program Tracer version 1.5
(Appendix I). We obtained tissue samples from 13 of the (Rambaut and Drummond 2009) was used to ensure that con-
17 recognized species of Lasiurus: L. atratus, L. blossevil- vergence had been reached using 10% burn-in. TreeAnnotator
lii, L. borealis, L. cinereus, L. ega, L. egregius, L. insularis, version 1.7.5 (Drummond et al. 2012) was used to summarize
L. intermedius, L. pfeifferi, L. salinae, L. seminolus, L. varius, the results and generate the final tree file.
and L. xanthinus. Of the species with recognized subspecies, Divergence estimates.—The program BEAST version 1.7.5
we sampled 3 subspecies of L. blossevillii (L. b. blossevillii, (Drummond et al. 2012) was used to calculate divergence times
L. b. frantzii, and L. b. teliotis), 3 subspecies of L. cinereus for the major clades of Lasiurus. We chose 1 individual from
(L. c. cinereus, L. c. seminolus, and L. c. villosissimus), 2 sub- each of the following species to use in the analysis: L. blossevillii
species of L. ega (L. e. ega and L. e. panamensis), and 1 sub- (1 each from North and South America), L. atratus, L. borealis,
species of L. intermedius (L. i. intermedius). A list of samples L. pfeifferi, L. seminolus, L. insularis, L. intermedius, L. varius,
used is found in Appendix I. We were unable to obtain tissue L. egregius, L. cinereus (including all 3 subspecies), L. xanthi-
samples for the remaining species (L. degelidus, L. minor, nus, and L. ega (1 each from North and South America). In order
L. ebenus, and L. castaneus). to calculate divergence times for the ingroup, 2 outgroup taxa
DNA sequencing.—DNA was extracted from frozen tis- were used, Tadarida brasiliensis and Myotis lucifugus. Based on
sue and amplified and sequenced using the primers shown in oldest known fossils for the split between molossids and ves-
Table 1. We examined the mitochondrial genes NADH dehy- pertilionids, we used a minimum age for the Tadarida/vesper-
drogenase 1 (ND1), NADH dehydrogenase 2 (ND2), and cyto- tilionid split as 37 Ma. For the Myotis/Lasiurus split, we used
chrome-b (Cytb), and 1 nuclear locus, the dead box Y (DBY) a minimum age of 20 Ma (Teeling et al. 2005), as this is the
gene on the Y chromosome. We attempted amplification and age of the oldest confirmed Myotis fossil. Because we were only
sequencing for all individuals but were not successful for some. certain of minimum node ages based on fossil data, we applied
Ninety-three of the 109 individuals were sequenced for ND1, exponential distribution priors for node age distributions for
54 for Cytb, 44 for ND2, and 33 for DBY. GenBank accession both the Tadarida/vespertilionid split and Myotis/Lasiurus split
numbers for each sequence can be found in Appendix I. (Ho and Phillips 2009). We did not include fossil data from
Phylogenetic analyses.—Data from each gene were analyzed the ingroup (Lasiurus) as a way of testing the divergence esti-
independently. Each dataset was analyzed with jModelTest ver- mates given by this analysis against the known fossil record of
sion 2.1.4 (Darriba et al. 2012) to assess the appropriate model Lasiurus. The tree prior we selected was speciation birth-death,
of evolution. That model was implemented in a maximum as the speciation models are the most appropriate tree priors for
1258 JOURNAL OF MAMMALOGY

Table 1.—List of primers used in this study. Last column indicates whether the primer was used in a PCR reaction, sequencing reaction, or both.

Locus Primer name Sequence (5′-3′) PCR/Seq


Cytb LGL765 GAAAAACCAYCGTTGTWATTCAACT Both
Cytb LGL766 GTTTAATTAGAATYTYAGCTTTGGG Both
Cytb BLO Cytb 70 F YTWCCAGCCCCTTCAAAYATCT Seq
Cytb LA CIN Cytb 300 F GGTCGAGGCCTTTACTATGG Seq
Cytb EPT 400 F GAGGMCAAATATCTTTYTGAGG Seq
Cytb LA BLO Cytb 400 F GRGGYCAAATATCCTTCTGAGG Seq
Cytb Red Cytb 530 R GGAAGGCGAAGAATCGRGTCA Seq
Cytb Cin Cytb 520 R AARAATCGTGTYAAGGTGGGTTT Seq
Cytb Ega Cytb 525 R AGGYAAAAAATCGGGTYAAGG Seq
Cytb In Cytb 525 R AAGGYGAAAAATCGGGTTAGG Seq
Cytb LA TEL Cytb 580 R AGAAGGTGAACTATAACCATTGC Seq
Cytb L Cin Cytb 620 R GAATTCCYATCGGGTTATTRGATCC Seq

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Cytb L Cin Cytb 750 R ATCAGGTTCTCCTAGCATGTCG Seq
Cytb TEL Cytb 840 R GGYACTGATCGTAGRATTGCAT Seq
Cytb LAS Cytb 850 R GCRAATARGAARTATCAYTCTGG Seq
Cytb LAS Cytb 900 Red R CCYAGTTTGTTTGGYACTGATCG Seq
Cytb LAS Cytb 900 CY R CCTARTTTRTTGGGTACRGATCGTA Seq
ND1 LGL381 ACCCCGCCTGTTTACCAAAAACAT Both
ND1 LGL563 GGTATGAGCCCGATAGCTTA Both
ND1 LAS 287 F CCTACGTGATCTGAGTTCAGACC Both
ND1 L Cin ND1 F AAGTGGCAGAGACCGGTAAT Both
ND1 LAS 290 F CGGYAATTGCRTAAAACTTAAGCTT Both
ND1 LAS ND1 IN F TTGGTGCYCTACGYGCAGTAGC Seq
ND1 RD LAS ND1 F GGATGAGCYTCYAATTCAAARTATGC Seq
ND1 CIN LAS ND1 F GGATGAGCATCAAATTCTAARTATGC Seq
ND1 YEL LAS ND1 F GGATGAGCTTCAAATTCAAAATAYGC Seq
ND1 LAS ND1 500 R TCTATCARGTCAAAAGGAGCTCG Seq
ND1 L Cin ND1 800 R GGTATGATGCTCGGACTCATAGG Seq
ND1 YEL LAS ND1 R CRGCATATTCTACATTRAATCC Seq
ND1 RD LAS ND1 R CKGCATATTCTACATTAAAYCC Seq
ND1 L CIN ND1 R TCTTAGGGGTAGGTTCAATTCCT Both
ND2 LGL562 TAAGCTATCGGGCCCATACC Both
ND2 LGL452 ACTTCAGGGTGCCCAAAGAATCA Both
ND2 ART 562 AGTAAGGTCAGCTAAATAAGCTATCG Both
ND2 ART 562 SEQ CCGAAAATGTTGGTTTATATCC Seq
ND2 L Cin ND2 200 F ACAAGCAACAGCCTCAATGC Seq
ND2 LAS ND2 400 F TGAGTRCCAGAAGTGACCCAAGG Seq
ND2 CIN LAS ND2 400 F TGAGTRCCAGAAGTAACTCARGG Seq
ND2 L Cin ND2 950 R TGTTACGATAGGGAGGAATAGAGG Seq
ND2 ART ND2 R GCTTTGAAGGCTCTTGGTCT Both
DBY VDBYX7Y F GACTCCAGTGCAAAAATATGCC Both
DBY Ves DBin7Y F KCCTATGAKCCATAAAAATGTRGG Seq
DBY LA DBin7Y F2 CAAACCGGATTTGGCCAACACC Seq
DBY LA DBin7Y dnR CTYAGGGTGTACTGACTGC Seq
DBY HDBY 7R CAGCCAATTCTCTTGTTGGG Both

examining interspecies relationships. The clock model selected analysis was repeated a 2nd time to ensure maximum conver-
was the lognormal relaxed clock. We used a concatenation of gence. TreeAnnotator version 1.7.5 (Drummond et al. 2012) was
the 3 mitochondrial gene sequences described above. Y chromo- used to summarize the BEAST results and generate the final tree.
some sequences were not included in this analysis because of Taxonomic revisions.—To determine whether any taxonomic
the lack of data from 2 key taxa: L. cinereus from Hawaii and revisions needed to be applied to our study group, we gathered
L. salinae from Argentina. Because a major goal of the dating data from both molecular and morphological sources. We first
analysis was to determine the time to colonization of Hawaii, we compared molecular divergences recovered here to other molec-
chose to exclude the Y chromosome data from the analysis due ular studies on mammals, and particularly studies on vesper-
to concerns over missing data (see above), rather than to exclude tilionid bats. We compared levels of molecular differentiation
the Hawaiian Lasiurus from an analysis of all loci. Models of at the intraspecific, interspecific, intrageneric, and intergeneric
evolution for each partition were specified independently. The levels of our taxa to those recovered in other mammalian stud-
BEAST analysis was run for 100 million generations and the ies. We also examined our data for consistent findings of recip-
software Tracer version 1.5 (Rambaut and Drummond 2009) rocal monophyly across the above levels of taxonomy for the
was used to determine that convergence had been reached. This genetic markers we examined. If, based on the above steps, we
BAIRD ET AL.—MOLECULAR SYSTEMATICS OF TREE BATS 1259

determined that a possible taxonomic change was warranted, dataset of all mtDNA loci used in the divergence time analysis
we went back to the morphological literature on Lasiurus to (Fig. 5) and the combined data from all loci in the species tree
determine whether there were also morphological justifications analysis (Fig. 6) strongly supports the red and hoary bats as being
for our hypothesized changes. sister taxa. Furthermore, it is clear that the red, hoary, and yellow
bats each represent well-supported monophyletic groups with
the exception of one traditionally recognized red bat species,
Results L. egregius, which groups with the hoary bats.
The data we obtained were able to resolve 3 major lineages that Red bats.—Red bats form a monophyletic group, with the
correspond to the red, yellow, and hoary bats. Three of the 4 loci exception of L. egregius, which groups sister to the traditionally
we examined (ND1, Cytb, and DBY) group the red and hoary recognized hoary bat clade. The red bats are the sister group to
bats as sister taxa, separate from the yellow bats (Figs. 1, 2, and the hoary bats plus L. egregius. Each currently recognized spe-
4). The remaining locus, ND2, shows weak support for the hoary cies included in our analysis formed a well-supported mono-
and yellow bats as sister taxa (Fig. 3). However, the combined phyletic group, with the exception of L. salinae from Argentina,

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Fig. 1.—Maximum likelihood tree for the ND1 locus. Support values are given as bootstrap proportions/Bayesian posterior probabilities. They
are coded as follows: + indicates a bootstrap value > 80 or pp >0.95; − indicates bootstrap value from 51 to 79 or pp between 51 and 94; * indi-
cates bootstrap or pp < 50. Note that in the maximum likelihood tree shown, there is no support for a monophyletic South American L. cinereus.
However, with 100 bootstrap replicates and Bayesian analysis, the monophyletic relationship is supported at 53/0.89. HI = Hawaii; NA = North
America; pp = posterior probability; SA = South America.
1260 JOURNAL OF MAMMALOGY

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Fig. 2.—Maximum likelihood tree for the Cytb locus. Support values are given as bootstrap proportions/Bayesian posterior probabilities. They are
coded as follows: + indicates a bootstrap value > 80 or pp > 0.95; − indicates bootstrap value from 51 to 79 or pp between 51 and 94; * indicates
bootstrap or pp < 50. HI = Hawaii; NA = North America; pp = posterior probability; SA = South America.

Fig. 3.—Maximum likelihood tree for the ND2 locus. Support values are given as bootstrap proportions/Bayesian posterior probabilities. They are
coded as follows: + indicates a bootstrap value > 80 or pp > 0.95; − indicates bootstrap value from 51 to 79 or pp between 51 and 94; * indicates
bootstrap or pp < 50. HI = Hawaii; NA = North America; pp = posterior probability; SA = South America.

which appears to be a member of the L. blossevillii lineage. The the red bats are not resolved, we can conclude that the South
North American (L. borealis and L. seminolus) and Cuban (L. American red bat species examined are not monophyletic.
pfeifferi) species are supported as being a monophyletic group. L. atratus is quite distinct from the remaining red bats and does
Although some aspects of the phylogenetic structure within not group with the other South American species.
BAIRD ET AL.—MOLECULAR SYSTEMATICS OF TREE BATS 1261

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Fig. 4.—Maximum likelihood tree for the DBY locus. Support values are given as bootstrap proportions/Bayesian posterior probabilities. They
are coded as follows: + indicates a bootstrap value > 80 or pp >0.95; − indicates bootstrap value from 51 to 79 or pp between 51 and 94. On this
phylogeny, 2 outgroups (Myotis lucifugus and Myotis velifer) have been omitted due to the length of the branches to save space. HI = Hawaii; NA
= North America; pp = posterior probability; SA = South America.

The Mexican and Central American subspecies of L. blos- from North America is quite distant (17–19% k2p dis-
sevillii (L. b. teliotis/frantzii) are genetically quite divergent tance at Cytb) and is the most basal lineage of yellow bats.
from the remaining L. blossevillii from South America at all L. insularis and L. intermedius are sister taxa with about
of the mitochondrial loci (average of about 14% k2p dis- 13% divergence between them. This level of divergence
tance at Cytb; Figs. 1–3); however, L. blossevillii from South indicates that L. insularis is indeed a valid species, which
America is indistinguishable based on the Y chromosome has been debated by several authors in the past (e.g., Hall
DBY sequence (Fig. 4). The relationship of the Galapagos and Jones 1961; Silva-Taboada 1976). Within L. ega, the
subspecies L. b. brachyotis from other L. blossevillii was not South American specimens form a clade that is sister to
evaluated due to the lack of sample material. Clustered well the remaining North and Central American specimens. The
within the L. blossevillii clade in the ND1 tree (Fig. 1) was North and South American L. ega differ from each other by
the single sample of L. salinae, a species whose existence has about 9% k2p distance at Cytb. One interesting observation
been unclear for 100 years (see Mares et al. 1995; Barquez is that for ND1, L. ega is not monophyletic (Fig. 1), but for
et al. 1999). The average divergence between L. salinae and the remaining loci examined, it is supported as being mono-
L. blossevillii at the ND1 locus is about 2%, whereas the phyletic (Figs. 2–4).
average divergence within L. blossevillii is higher, at 2.6%. Hoary bats.—We find 3 distinct mtDNA clades of L. cinereus
The position of L. varius varies between loci examined. With (Figs. 1–3; see Fig. 1 legend for explanation of depiction of
ND2 and DBY it is supported as being at the base of the red non-monophyly at that locus) that we interpret to represent the
bat clade, whereas with Cytb it is sister to L. blossevillii, and 3 subspecies recognized by Wilson and Reeder (2005). Our 2
with ND1 its position is not statistically supported, though it is samples of South American L. cinereus are from the geographic
clearly a member of the red bat clade. In the combined mtDNA range of L. c. villosissimus recognized by Gardner and Handley
analysis performed using BEAST, with a single specimen of (2007). The South American subspecies (L. c. villosissimus) is
each species, the analysis supported L. varius at a basal posi- the sister group to the other subspecies and is a monophyletic
tion relative to the remaining red bats (Fig. 5), and this basal clade in Fig. 3. L. cinereus from Hawaii are found in 2 dis-
relationship was also recovered with the *BEAST species tree tinct clades on the phylogeny: one consisting of only Hawaiian
using all 4 loci (Fig. 6). L. c. semotus from Maui and the Big Island of Hawaii, whereas
Yellow bats.—The 4 recognized species of yellow bats are other individuals from Maui group within a clade that includes
all genetically differentiated from one another. L. xanthinus all North American specimens (L. c. cinereus). We consider
1262 JOURNAL OF MAMMALOGY

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Fig. 5.—Divergence time estimates. Results are from a concatenation of the 3 mitochondrial gene sequences. Scale is in millions of years before pres-
ent. Gray bars at nodes represent the 95% highest posterior density for the mean age. Asterisks represent nodes supported at 98% or greater posterior
probability. The node without an asterisk is supported at 55% posterior probability. HI = Hawaii; NA = North America; SA = South America.

Fig. 6.—Species tree analysis. Results are based on sequence data from all 4 loci using the species tree approach implemented in *BEAST.
Numbers at nodes represent Bayesian posterior probabilities. HI = Hawaii; NA = North America; SA = South America.

the uniquely Hawaiian clade to represent L. c. semotus and the Between the South American subspecies and both the Hawaiian
clade that includes both Hawaiian and North American speci- (L. c. semotus) and North American (L. c. cinereus) subspecies,
mens to represent L. c. cinereus. there is greater than 11% k2p sequence divergence at Cytb,
There are variable degrees of sequence divergence within and while the Hawaiian and North American subspecies diverge
among subspecies of L. cinereus. Within the South American about 4% k2p at Cytb.
subspecies (L. c. villosissimus), there is about 4% (k2p) Species tree and divergence times.—Results from the BEAST
sequence divergence at ND1 (multiple South American speci- divergence time analysis are shown in Fig. 5. These data indi-
mens were not sequenced for Cytb); within the North American cate that the split between Myotis and Lasiurus occurred about
subspecies (L. c. cinereus), there is only 0–1% k2p divergence 33 Ma (22.1–44.7 Ma, 95% highest posterior density), the split
at Cytb. Within the L. c. semotus clade, there is < 1% divergence. between the yellow bats and the rest of Lasiurus occurred about
BAIRD ET AL.—MOLECULAR SYSTEMATICS OF TREE BATS 1263

18.5 Ma (12.2–26.5 Ma), and the split between the red and show the pattern we observe here (Boissinot and Boursot 1997;
hoary bats occurred about 14 Ma (9.1–20.8 Ma; Fig. 5). These Albrechtova et al. 2012). Increased maternal penetration of a
results are consistent with the fossil record of Lasiurus. The species boundary is somewhat more expected due to Haldane’s
earliest fossils known from Lasiurus date to the late Miocene, Rule, so the pattern exhibited in Lasiurus and house mice
circa 9 Ma (Czaplewski et al. 1999). Still other fossils of this appears to be unusual. As demonstrated by Albrechtova et al.
genus are known from the Pliocene in Florida (Morgan 1991). (2012), there may be greater selection on a particular sperm
The fossil record for extant Lasiurus is sparse, but most species phenotype in Lasiurus that has allowed it to cross the species
have fossil records extending into the Pleistocene (Shump and barrier and exhibit patterns associated with a selective sweep.
Shump 1982; Kurta and Lehr 1995). An alternative explanation could be that the DBY locus is sim-
Results from the species tree analysis in *BEAST are shown ply more slowly evolving than the mtDNA loci examined. This
in Fig. 6. The phylogeny is more weakly supported than the alternative does not appear to be likely, given that other lineages
mtDNA concatenated analysis shown in Fig. 5; however, the 2 of Lasiurus that diverged much more recently than the North
trees are not significantly different from each other. They only and South American L. blossevillii (such as L. pfeifferi/L. sem-

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vary in the placement of L. atratus, but the statistical support inolus, L. cinereus from North America and Hawaii, and the
for that species’ placement is low in both analyses. North and South American lineages of L. ega; Fig. 5) are eas-
ily distinguishable at the DBY locus. Another alternative is that
there has been incomplete lineage sorting at the DBY locus. Our
Discussion data cannot rule out this possible explanation for the observed
Using greater taxonomic and geographic sampling than previ- patterns. We recommend that the above hypotheses be tested
ous genetic studies of Lasiurus (Baker et al. 1988; Morales and further to determine with greater certainty whether a selective
Bickham 1995; Hoofer and Van Den Bussche 2003; Roehrs et al. Y sweep has indeed taken place in L. blossevillii, or whether the
2010), we were able to resolve many of the ambiguous relation- observed pattern is simply due to incomplete lineage sorting.
ships among most of the major lineages within this genus. Morales and Bickham (1995) noted that the name L. b. frant-
Red bats.—The placement of L. egregius has been problem- zii has priority over L. b. teliotis. These authors also suggested
atic in the past, but most authors have recognized it as a red bat. that the divergence between L. b. blossevillii and L. b. frant-
Handley (1960) considered it a member of the L. borealis group zii could indicate that they are separate species, which is con-
(red bats), but noted that previous authors considered it a member firmed by our mtDNA data.
of Dasypterus (yellow bats) because of the lack of the small P1 Yellow bats.—Baker and Patton (1967) and Bickham (1987)
upper premolar. Handley’s opinion was that this was not a sig- noted that L. intermedius possessed a different karyotype than the
nificant morphological diagnosis, as roughly 10% of (non-Dasyp- rest of the Lasiurini studied. They also indicated that L. xanthi-
terus) Lasiurus lack this premolar. Our data clearly show that it nus has an identical karyotype to the red and hoary bats studied,
is neither a red bat nor a yellow bat, but rather (and surprisingly) and L. ega panamensis has a unique X chromosome. Our analyses
groups most closely with the traditionally recognized hoary bats. place L. intermedius within the rest of the yellow bats. We can con-
Furthermore, our results show that the Mexican/Central clude, based on its position in the phylogenies reported here, that
American subspecies of L. blossevillii (L. b. teliotis and the unique karyotype of L. intermedius is most likely a derived,
L. b. frantzii) are distinct from South American L. blossev- and not primitive, condition within the Lasiurini. Bickham (1987)
illii at all mitochondrial loci, but that there is no distinc- also concluded that it was a derived karyotype and proposed that
tion between L. b. teliotis and L. b. frantzii at these loci. the common karyotype shared by the hoary bat L. cinereus, and the
This result is similar to that found by Morales and Bickham red bats L. borealis, L. degelidus, L. seminolus, and L. minor, was
(1995) based on restriction fragment analysis and Baker the primitive karyotype for the group. Because L. xanthinus also
et al. (1988) based on allozymes. Our combined mtDNA possesses this common karyotype (Baker and Patton 1967) and is
data indicate that the South and Central American lineages placed at the base of the yellow bat lineage (this paper), we can
of L. blossevillii diverged over 4 million years ago (2.3–6.9 concur that the most likely primitive karyotype for the Lasiurini
Ma; Fig. 5). However, for the DBY gene, all of the L. blos- is that possessed by L. xanthinus and the red and hoary bats.
sevillii are indistinguishable from one another. One possi- Although not all lasiurines have been karyotyped, there appears to
ble explanation for this observation is that there has been be no karyotypic changes within the red bats, hoary bats, and the
a recent Y chromosome sweep that involved both North base of the yellow bat lineage (L. xanthinus). The remaining yel-
and South American populations of L. blossevillii. If this is low bats appear to have undergone a significant amount of chro-
the case, we can conclude that the observable divergence mosomal evolution within about the last 10 My (6.5–16.2 Ma),
between North and South American L. blossevillii is due to according to our divergence estimates from BEAST (Fig. 5).
effects of females, rather than males. The BEAST analysis indicates that the North and South
Studies on other mammals have noted discordant patterns American L. ega lineages diverged from each other just over 2.6
of maternal and paternal penetration of species (or subspecies) Ma. Within the yellow bats, this is the most recent divergence
boundaries. Whereas spinner dolphins (Stenella longirostris— observed, but similar in timing to the split between L. borealis
Andrews et al. 2013) and Scotophilus (Trujillo et al. 2009) and L. pfeifferi/L. seminolus and between the North and South
show increased mtDNA penetration of species boundaries American lineages of L. cinereus. We conclude from these
compared to the Y chromosome, house mice (Mus musculus) results, as well as the high degree of genetic differentiation
1264 JOURNAL OF MAMMALOGY

observed, that the North and South American lineages of L. ega American clade. Our results, with additional informative sites
that we sampled are most likely distinct species. However, provided by sequencing, found that the individual that they
without a more complete sampling of the subspecies within studied grouped in the separate L. c. semotus clade.
L. ega, we cannot recommend taxonomic changes. A more We also found evidence to indicate multiple invasions of the
detailed study of L. ega should be conducted to address the sta- Hawaiian Islands from North America at very different times.
tus of these populations. The older invasion, represented by the presumptive Lasiurus
We note that the pattern shown by L. ega of high levels of c. semotus clade, and present on both Maui and the Big Island
divergence between North and South American lineages is (Fig. 2), occurred about 1 Ma (0.4–1.8 Ma; Fig. 5). The obser-
repeated in other currently recognized species of Lasiurus, vation of 2 distinct North American L. c. cinereus haplotypes
including L. cinereus and L. blossevillii, and all occur during a (Fig. 2) on Maui indicates at least 1 and possibly as many as 2
relatively short (about 1.5 My) time period. The split between more recent invasions. Remarkably, this observation confirms
North and South American lineages of these species date to a recent study modeling the possibility of the colonization of
about 2.63 Ma (1.2–4.5 Ma; L. ega), 3.41 Ma (1.7–5.7 Ma; Hawaii from North America by L. cinereus that concluded

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L. cinereus), and 4.32 Ma (2.3–6.9 Ma; L. blossevillii; Fig. 5). that repeated colonization events are plausible given both the
We note that the divergences all occur shortly after the pro- physiology of this species and the wind conditions experienced
cess of closure of the Isthmus of Panama had affected ocean between North America and Hawaii (Bonaccorso and McGuire
currents, and thus had significant impact on climate differ- 2013). This indicates that the L. c. cinereus haplotypes may
entiation between North and South America (4.6 Ma—Haug have invaded Hawaii on their own and are not necessarily a
and Tiedemann 1998). We hypothesize that the relatively short result of human introduction. Further studies using nuclear gene
stretch of ocean between North and South America prior to sequences are needed to examine whether there is interbreeding
the Isthmus’ formation was not an effective isolating barrier between the old (L. c. semotus) and new (L. c. cinereus) forms
for Lasiurus. However, unlike the pattern in many other mam- that are both present on Maui.
malian taxa of interchange between North and South America The conservation impacts of this finding are unknown. We
after the formation of the Isthmus, we believe that the climate can confirm that the older L. c. semotus lineage certainly pre-
differences caused by its formation could have acted as an iso- dates humans inhabiting the islands (estimated to have occurred
lating mechanism for these different lineages of Lasiurus. between the 1st century BC to AD 800—Burney et al. 2001)
Additionally, all of our phylogenies demonstrate a high and do not represent an invasive species. The mechanism for
degree of differentiation between L. xanthinus and the remain- introduction of the younger L. c. cinereus haplotypes cannot be
ing yellow bats. The BEAST analysis indicates that the split confirmed by our data, and the possibility exists that they were
between these lineages was about 10.7 Ma (6.5–16.2 Ma) and introduced by humans. We recommend that additional study
is the oldest divergence recovered except for those among the 3 regarding the distribution, population size, and interactions of
major lineages (red, yellow, and hoary lineages). these 2 lineages be performed prior to revisiting the conserva-
Hoary bats.—Our results indicate that L. egregius is sister tion status of hoary bats on Hawaii.
to the traditionally recognized hoary bats, and for simplic- Revised taxonomy.—The results presented here clearly
ity we will refer to that broader clade (traditional hoary bats demonstrate that the red, yellow, and hoary bats are geneti-
plus L. egregius) as the hoary bats. The molecular placement cally well-differentiated groups. All molecular markers exam-
of this species as more closely related to the traditional hoary ined show strong support for the monophyly of each group, as
bats contrasts the morphological observations that L. egregius well as the sister taxa relationship of the red and hoary bats.
has red bat characteristics. L. egregius being morphologically Previous morphological analyses (Tate 1942; Hill and Harrison
more similar to the red bats, but more closely related to the 1987) concur that there is differentiation between at least 2 of
hoary bats, indicates that the common ancestor of these 2 lin- these groups. Hoofer and Van Den Bussche (2003) and Roehrs
eages most likely had a red bat-like phenotype. This is the most et al. (2010) supported the monophyly of the Lasiurini within
parsimonious explanation due to the unexpected relationship the vespertilionids. Their data clearly showed that the level of
between L. egregius and the traditional hoary bats and therefore divergence between the red, yellow, and hoary bats is in line
only one phenotypic change to the hoary bat phenotype before with the level of divergence between other recognized vesper-
the common ancestor of the L. cinereus lineage needs to be tilionid genera. Neither of the latter 2 studies supported taxo-
assumed. nomic changes within Lasiurus, however, because their data
The 3 subspecies of L. cinereus recognized by Wilson and did not resolve the relationships among the 3 species groups.
Reeder (2005) have widely disjunct distributions in Hawaii, Due to the broader sampling of both taxa and genetic mark-
South America, and North America (Shump and Shump 1982) ers in our study, in combination with the overall perspective
and are genetically well differentiated from one another. on diversity between vespertilionid genera provided by Hoofer
Data presented here indicate that the geographic origin for and Van Den Bussche (2003) and Roehrs et al. (2010) and past
Lasiurus on the Hawaiian Islands is North America. This result morphological studies, we propose that these 3 groups are most
was found by Morales and Bickham (1995) using a single spec- appropriately divided into 3 separate genera as follows: The
imen, which we also sequenced. Their findings were different, name Lasiurus is applicable to the red bats, the name Aeorestes
however, because the individual grouped within the North is applicable to the hoary bats (including L. egregius) and the
BAIRD ET AL.—MOLECULAR SYSTEMATICS OF TREE BATS 1265

name Dasypterus is ascribed to the yellow bats. This arrange- Lasiurus Gray, 1831: 38; type species Vespertilio borealis
ment agrees with previous taxonomic classifications based (Müller, 1776), by subsequent designation (Miller and Rehn
on morphology (Tate 1942). This arrangement also reflects 1902: 261).
the widely accepted colloquial groupings of these bats (based Nyc[ticea]. LeConte, 1831: 432; part; incorrect subsequent
mainly on morphological divisions). Most scientists already spelling of Nycticeius Rafinesque, 1819.
refer to “red bats,” “yellow bats,” and “hoary bats” when refer- Nycticeius: Poeppig, 1835: 451; footnote; part; not Nycticeius
ring to these groups. Therefore, we feel it is appropriate to have Rafinesque, 1819.
the taxonomy reflect these already used groupings because Scotophilus: Gray, 1838: 498; part; not Scotophilus Leach,
molecular and morphological data support their delineation. 1821.
We raise L. blossevillii frantzii (including specimens of the Atalapha: Gervais, 1854: 114; part; not Atalapha Rafinesque,
formerly recognized L. b. teliotis) to a species separate from 1814.
L. blossevillii: L. frantzii. This would place the mostly North Remarks: We include the following species in this genus:
American forms into a single species (although we note that L. atratus, L. blossevillii, L. borealis, L. castaneus, L. degeli-

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L. frantzii does extend into northern South America), while the dus, L. ebenus, L. frantzii, L. minor, L. pfeifferi, L. seminolus,
strictly South American forms would be in a separate species, and L. varius. Species with taxonomic changes are listed in
L. blossevillii. This is supported by the deep split between these the synonymy below.
2 groups, which diverged from each other more than 4.3 Ma
Lasiurus blossevillii (Lesson, 1826)
(Fig. 5). Although these 2 putative species are identical at the
Synonyms: see under subspecies.
DBY locus, we still support their separation based on the deep
Subspecies:
divergence at the mtDNA loci examined. Ample precedents
L. b. salinae Thomas, 1902
exist in the mammalian literature for using mtDNA data alone
Synonyms:
to revise taxonomy using a genetic species concept (Baker and
Lasiurus borealis salinae Thomas, 1902: 238; type locality
Bradley 2006). Moreover, the morphological differences used
“Cruz del Eje, Central Cordova,” Argentina.
in describing these subspecies support their being differentiated
[Lasiurus (Lasiurus) borealis] salinae: Trouessart, 1904: 87;
from one another.
name combination.
We recommend that L. salinae be considered a subspecies of
Lasiurus enslenii J. L. Lima, 1926: 113; type locality “Estado
L. blossevillii. Our single sample of L. salinae is nested within
do rio Grande do Sul, São Lourenço,” Brazil.
the L. blossevillii clade and does not show any evidence of
Lasiurus ensleveni G. M. Allen 1939: 155; incorrect spelling
being genetically distinct from that group.
of Lasiurus enslenii J. L. Lima.
We recommend that the 3 subspecies of L. cinereus be raised
Lasiurus borealis blossevillii: Handley, 1960: 469; part;
to species status. Because the exact locality of the type speci-
name combination.
men for L. c. semotus is unclear, including the specific island
Lasiurus borealis varius: Cabrera, 1958: 113; part; name
(Allen 1890; Lyon and Osgood 1909; Poole and Schantz 1942),
combination; not N[ycticeius]. varius, Poeppig, 1835.
the most conservative approach to assigning names to the
Lasiurus salinae: Mares, Barquez, and Braun 1995: 229.
Hawaiian subspecies is to assume that the more distinct clade
L. b. blossevillii (Lesson, 1826)
is semotus, while the Hawaiian individuals with haplotypes
Synonyms:
more closely related to North American individuals belong to
Vesp[ertilio]. lasiurus: É. Geoffroy St.-Hilaire, 1806: 200; not
cinereus. It is important to note that 2 species of hoary bats are
Vespertilio lasiurus Schreber, 1781.
found on the Hawaiian Islands, which increases the number of
Vespertilio Blossevillii Lesson, 1826: 95; type locality
native land mammals in Hawaii from 1 to 2.
“Monte-Video,” Uruguay; revised to “la rivière de la Plata,”
Synonymy: Buenos Aires, Argentina by Lesson and Garnot (1827: 139).
Tribe Lasiurini Tate, 1942 Vespertilio bonariensis Lesson, 1827, in Lesson and Garnot,
1827: 137, plate II, fig. 1 (in Atlas, vol. 2); type locality “la
Genus Lasiurus Gray, 1831 rivière de la Plata,” Buenos Aires, Argentina.
Synonyms: Scotophilus lasiurus: Gray, 1838: 498; not Vespertilio lasi-
Vespertilio: Müller, 1776: 20; part; not Vespertilio Linnaeus, urus Schreber, 1781.
1758. Scotophilus Blossevilii: Gray, 1838: 498; name combination.
Nycteris Borkhausen, 1797: 86; type species Vespertilio nove- Nycticejus bonariensis Temminck, 1840: 158; name
boracensis. Nycteris Borkhausen is a homonym of Nycteris combination.
Cuvier and Geoffroy St. Hilaire. Vespertilio bursa Lund, 1842: 135; nomen nudum; part (see
Atalapha Rafinesque, 1814: 12; part. Winge 1892).
Nycticeius Rafinesque, 1819: 417; part. Lasiurus noveboracensis: Tomes, 1857: 34; part; not
Nycticejus Temminck, 1824: xviii; part; incorrect subsequent Vespertilio noveboracensis Erxleben, 1777.
spelling of Nycticeius Rafinesque, 1819. Lasiurus Blossevillei: Fitzinger, 1870: 405; name combination.
Taphozous: Lesson, 1827: 84; part; not Taphozous É. Geoffroy Lasiurus Natterei Fitzinger, 1870: 407; type locality
St.-Hilaire, 1818. “Cuyaba,” Mato Grosso, Brazil.
1266 JOURNAL OF MAMMALOGY

Lasiurus bonariensis: Fitzinger, 1870: 408; name Lasiurus borealis frantzii: Goldman, 1932: 148; name
combination. combination.
Atalapha Frantzii: Hensel, 1872: 25; not Atalapha frantzii Nycteris borealis frantzii: Hall, 1981: 223; name combination.
Peters, 1870. Lasiurus blossevillii frantzii: Baker, Patton, Genoways, and
Atalapha (Atalapha) noveboracensis: Dobson, 1878: 269; Bickham, 1988; name combination.
part; not Vespertilio noveboracensis Erxleben, 1777. L. f. teliotis (H. Allen, 1891)
[Nycticejus (]Atalapha[)] bonaërensis Burmeister, 1879: 93; Synonyms:
unjustified emendation of V. bonariensis Lesson. Atalapha teliotis H. Allen, 1891: 5; type locality unknown,
Atalapha borealis frantzii: Thomas, 1898: 2; name combina- “but probably Southern California.”
tion; not Atalapha frantzii Peters, 1870. Lasiurus borealis teliotis: Miller, 1897: 110; name
Lasiurus borealis bonariensis: Thomas, 1901b: 435; name combination.
combination. [Lasiurus (Lasiurus) borealis] teliotis: Trouessart, 1904: 87;
Vespertilio aurantius Miranda-Ribeiro, 1903: 179; name combination.

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nomen nudum. Nycteris borealis teliotis Miller 1912: 64.
Lariurus Frantzii: Cabrera, 1903: 293; name combination; Lasiurus borealis ornatus Hall, 1951: 226; type local-
not Atalapha frantzii Peters. ity “Peñuela, Veracruz,” Mexico; replacement name for
Lasiurus borealis mexicanus: Lima, 1926: 108; part; not Lasiurus borealis mexicanus Miller, 1897; not A[talapha].
Atalapha mexicana Saussure. mexicana Saussure, 1861 (=Lasiurus cinereus Palisot de
Lasiurus borealis blossevillii: Cabrera, 1930: 435; name Beauvois).
combination.
Lasiurus borealis blossevillii: Handley, 1960: 469; part; name Genus Aeorestes Fitzinger, 1870
combination. Vesp[ertilio]: É. Geoffroy St.-Hilaire, 1806: 204; part; not
Atalapha franzu Ximénez, Langguth, and Praderi, 1972: 2: Vespertilio Linnaeus, 1758.
incorrect spelling of, but not Atalapha frantzii Peters. Temminck 1824
L[asiurus]. borealis blosseivillii Barquez and Ojeda, 1992: Nycticeius: Poeppig, 1835: 451; footnote; part; not Nycticeius
248; incorrect spelling of Vespertilio blossevillii Lesson. Rafinesque, 1819.
Lasiurus blossovillei Emmons, 1993: 64; incorrect spelling of Scotophilus: Gray, 1838: 498; part; not Scotophilus Leach,
Vespertilio blossevillii Lesson. 1821.
L. b. brachyotis (J. A. Allen, 1892) Lasiurus: Gray, 1843: 32; part.
Synonyms: Atalapha: Gervais, 1854: 114; part; not Atalapha Rafinesque,
Atalapha brachyotis J. A. Allen, 1892: 47; type locality 1814.
“Chatham Island,” Galápagos, Ecuador. Aeorestes Fitzinger, 1870: 427; part; type species Aeorestes
Lasiurus brachyotis Heller, 1904: 249; name combination. villosissimus (É. Geoffroy St.-Hilaire, 1806) by original
Lasiurus bauri G. M. Allen, 1939: 259; incorrect subsequent designation.
spelling for A. brachyotis J. A. Allen, 1892. Nycticejus Burmeister, 1879: 93; part; incorrect subsequent
Lasiurus borealis [brachyotis]: Niethammer, 1965: 595; spelling of Nycticeius Rafinesque, 1819.
name combination. Nycteris: Miller, 1912: 64; part; not Nycteris É. Geoffroy St.-
Lasiurus frantzii (Peters, 1870) Hilaire and Cuvier, 1795.
Synonyms: see under subspecies. Remarks: We include the following species in this genus:
Subspecies: A. cinereus, A. egregius, A. semotus, and A. villosissimus.
L. f. frantzii (Peters, 1870) See discussion in Gardner and Handley (2007) for explana-
Synonyms: tion of the invalidity of Atalapha Rafinesque, 1814, for the
Atalapha [Atalapha] Frantzii Peters, 1870: 908; type locality hoary bats.
“Costa Rica.”
[Atalapha (Atalapha) noveboracensis] var. α Atalapha frant- Aeorestes cinereus (Palisot de Beauvois, 1796)
zii: Dobson, 1878: 271; part; name combination. North American hoary bat
Atalapha noveboracensis: Alston, 1879: 22; not Vespertilio Synonyms:
noveboracensis Erxleben, 1777. Vespertilio linereus Palisot de Beauvois, 1796: 18 (spell-
A[talapha]. frankii: H. Allen, 1891: 5; incorrect subsequent ing corrected to cinereus before distribution); type locality
spelling for Atalapha frantzii Peters, 1870. “Philadelphia,” Pennsylvania.
Lasiurus borealis mexicanus: Miller, 1897: 111; part; not Vespertilio pruinosus Say in James, 1823: 167; type locality
A[talapha]. mexicana Saussure, 1861. “Engineer Cantonment,” Washington Co., Nebraska.
Nycteris borealis mexicana: Goldman, 1920: 216; not A[talapha]. mexicana Saussure, 1861: 97; type locality not
A[talapha]. mexicana Saussure, 1861. given, “but without a doubt in some one of the States of
Lasiurus borealis mexicana: Lima, 1926: 108; part; not southern Mexico, probably Veracruz, Puebla, or Oaxaca,
A[talapha]. mexicana Saussure, 1861. Mexico” (Miller 1897: 111).
BAIRD ET AL.—MOLECULAR SYSTEMATICS OF TREE BATS 1267

Aeorestes villosissimus (Geoffroy St.-Hilaire, 1806) Dasypterus villosissimus: J. A. Allen, 1905: 191, footnote;
South American hoary bat name combination.
Synonyms: see under subspecies. Nycteris cinerea villosissima: Thomas, 1910: 240; name
Subspecies: combination.
A. v. brasiliensis (Pira, 1904) Remarks: The only subspecies we examined in this study was
Synonyms: A. v. villosissimus. Therefore, the placement of the remaining
Atalapha cinerea brasiliensis Pira, 1904: 12; type locality subspecies should be examined further. Based on our analy-
“Ignape,” [=Iguape] São Paulo, Brazil. ses, we took the most conservative approach by considering
Lasiurus cinereus: Lima, 1926: 111; name combination. them subspecies of A. villosissimus because they are all from
Lasiurus cinereus grayi: Vieira, 1942: 416; part. South America. Previous authors (e.g., Shump and Shump
Lasiurus cinereus villosissimus: Cabrera, 1958: 114; part. 1982) considered all South American forms as synonyms of
L[asiurus]. c[inereus]. brasiliensis: Gardner and Handley, L. c. villosissimus, prior to their being elevated to subspecific
2007; name combination. status by Gardner and Handley (2007).

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A. v. grayi (Tomes, 1857)
Aeorestes semotus (Allen, 1890)
Synonyms:
Hawaiian hoary bat
Lasiurus Grayi Tomes, 1857: 40; type locality “Chili.”
Synonyms:
Atalapha (Atalapha) Grayi: W. Peters, 1870: 910; part; name
Atalapha semota Allen, 1890: 173; type locality “Sandwich
combination
Islands” [ = Hawaiian Islands], United States; type not des-
[Atalapha (Atalapha) cinerea] Var. α (Atalapha grayi):
ignated, but later designated by Lyon and Osgood (1909:
Dobson, 1878: 273; part; name combination.
276) as specimen number 15631 from Hawaiian Islands (no
[Lasiurus (Lasiurus) cinereus] grayi: Trouessart, 1904: 87;
specific island designated).
name combination.
[L]. semotus: Thomas, 1902: 238, name combination.
Dasypterus villosissimus: J. A. Allen, 1905: 191, footnote;
[Lasiurus (Lasiurus) semotus: Trouessart, 1904: 87; name
part; not Vespertilio villosissimus É. Geoffroy St.-Hilaire,
combination.
1806.
Lasiurus cinereus semotus: Hall and Jones, 1961: 95; name
Lasiurus cinereus villosissimus: Osgood, 1943: 53; part; not
combination.
Vespertilio villosissimus É. Geoffroy St.-Hilaire, 1806.
A. v. pallescens (W. Peters, 1870) Aeorestes egregius (W. Peters, 1870)
Synonyms: Giant red bat
Atalapha [(Atalapha)] pallescens W. Peters, 1870: 910; type Synonyms:
locality “Paramo de la Culata, Andes de Merida (Region Atalapha [(Dasypterus)] egregia W. Peters, 1870: 912; type
frigida), Venezuela.” locality “Sta. Catharina,” Brazil.
[Atalapha (Atalapha) cinerea] Var. α (Atalapha grayi): [Lasiurus (Dasypterus)] egregius: Trouessart, 1904: 86; name
Dobson, 1878: 273; part; name combination. combination.
Lasiurus pallescens: J. A. Allen, 1900: 94; name combination. Dasypterus egregius: Miller, 1907: 223; name combination.
Lasiurus cinereus pallescens: Hershkovitz, 1949: 452. Lasiurus egregius: Handley, 1960: 472; name combination.
Lasiurus cinereus villosissimus: Cabrera, 1958: 114; part; not Nycteris egregia: Hall, 1981: 225; name combination.
Vespertilio villosissimus É. Geoffroy St.-Hilaire, 1806.
Genus Dasypterus W. Peters, 1870
A. v. villosissimus (É. Geoffroy St.-Hilaire, 1806)
Synonyms:
Synonyms:
Nycticejus Gervais, 1856: 73.
Vesp[ertilio]. villosissimus É. Geoffroy St.-Hilaire, 1806:
Lasiurus Tomes, 1857: 42; part.
204; type locality “Paraguay;” restricted to Asunción by
Atalapha (Dasypterus) W. Peters, 1870: 912; part; type spe-
Cabrera (1958: 114).
cies Lasiurus intermedius (H. Allen, 1862) by subsequent
Lasiurus noveboracensis: Tomes, 1857: 34; part; not
designation.
Vespertilio noveboracensis Erxleben, 1777.
Remarks: We include the following species in this genus:
Aeorestes villosissimus: Fitzinger, 1870: 427; name
D. ega, D. insularis, D. intermedius, and D. xanthinus.
combination.
Atalapha cinerea: Hensel, 1872: 25; name combination. Dasypterus ega (Gervais, 1856)
Atalapha (Atalapha) noveboracensis: Dobson, 1878: 269; Synonyms: see under subspecies.
part; not Vespertilio noveboracensis Erxleben, 1777. Subspecies:
[Nycticejus (]Atalapha[)] villosissima: Burmeister, 1879: 95; D. e. ega (Gervais, 1856)
name combination. Synonyms:
Lasiurus villosissimus: J. A. Allen, 1901: 184; part; name Vespertilio bursa Lund, 1842: 135; nomen nudum; part (see
combination. Winge 1892).
Lasiurus cinereus [villosissimus] Thomas, 1901: 435, name Nycticejus Ega Gervais, 1856: 73, 87, plate 14, fig. 1. Type
combination. locality, “Ega, ville du Brésil,” Amazonas, Brazil.
1268 JOURNAL OF MAMMALOGY

Lasiurus Aga Tomes, 1857: 43; incorrect subsequent spelling Lasiurus ega panamensis: Handley, 1960: 474; name
of D. ega Gervais. combination.
Atalapha (Dasypterus) Ega: W. Peters, 1870: 914; name Nycteris ega panamensis: Hall, 1981: 221; name combination.
combination.
Dasypterus ega [ega] O. Thomas, 1901a: 247; part; name Dasypterus insularis (Hall and Jones, 1961)
combination. Synonyms:
[Lasiurus (Dasypterus)] ega: Trouessart, 1904: 86; part; Lasiurus intermedius insularis Hall and Jones, 1961: 85; type
name combination. locality “Cienfuegos, Las Villa Province,” Cuba.
Lasiurus ega ega: Handley, 1960: 474; name combination. Lasiurus insularis Silva-Taboada, 1976.
D. e. argentinus Thomas, 1901 Nycteris intermedia insularis: Hall, 1981: 220; name
Synonyms: combination.
Dasypterus ega argentinus O. Thomas, 1901a: 247; type
locality “Goya, Corrientes, Argentina.” Dasypterus intermedius (H. Allen, 1862)

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[Lasiurus (Dasypterus)] ega argentinus: Trouessart, 1904: Synonyms: see under subspecies.
86; name combination. Subspecies:
Dasypterus intermedius: J. L. Lima, 1926: 114; not Lasiurus D. i. intermedius (H. Allen, 1862)
intermedius H. Allen, 1862. Synonyms:
Dasypterus intermedius: Vieira, 1942: 421; not Lasiurus Lasiurus intermedius H. Allen, 1862: 246; type locality
intermedius H. Allen, 1862. “Matamoros,” Tamaulipas, Mexico.
Lasiurus ega argentinus: Handley, 1960: 473; name Atalapha [(Dasypterus)] intermedia: Peters, 1870: 912; name
combination. combination.
Dasypterus ega caudatus: Barquez et al., 1999: 143; part; not Atalapha (Nycticejus) intermedius: Coues and Yarrow, 1875:
Lasiurus caudatus Tomes, 1857. 86; name combination.
D. e. caudatus (Tomes, 1857) Dasypterus intermedius: H. Allen, 1893: 137; name
Synonyms: combination.
Lasiurus caudatus Tomes, 1857: 42; type locality [Lasiurus (Dasypterus)] intermedius: Trouessart, 1904: 86;
“Pernambuco,” Brazil. name combination.
Atalapha (Dasypterus) caudata: W. Peters, 1870: 914; name Lasiurus intermedius intermedius: Hall and Jones, 1961: 84;
combination. name combination.
Atalapha (Dasypterus) ega: Dobson, 1878: 276; part; not Nycteris intermedia intermedia: Hall, 1981: 220; name
Nycticejus Ega Gervais, 1856. combination.
Dasypterus ega ega: Cabrera, 1958: 115; part; not Nycticejus D. i. floridanus Miller, 1902
Ega Gervais, 1856. Synonyms:
Lasiurus ega argentinus: Handley, 1960: 473; part; not Dasypterus floridanus Miller, 1902: 392; type locality “Lake
Dasypterus ega argentinus Thomas, 1901. Kissimmee,” Oceola Co., Florida.
Lasiurus ega ega: Hall and Jones, 1961: 94; part; not [Lasiurus (Dasypterus)] floridanus: Trouessart, 1904: 86;
Nycticejus Ega Gervais, 1856. name combination.
L[asiurus]. e[ga]. caudatus: Kurta and Lehr, 1995: 1; name Lasiurus floridanus: Handley, 1960: 475; name combination.
combination. Lasiurus intermedius floridanus: Hall and Jones, 1961: 84;
D. e. fuscatus Thomas, 1901 name combination.
Synonyms: Nycteris intermedia floridana: Hall, 1981: 220; name
Dasypterus ega fuscatus Thomas, 1901a: 246: type locality combination.
“Rio Cauquete, Cauca River, Colombia. Altitude 1000 m.”
[Lasiurus (Dasypterus) ega] fuscatus: Trouessart, 1904: 86; Dasypterus xanthinus Thomas, 1897
name combination. Synonyms:
Dasypterus ega punensis J. A. Allen, 1914: 382; type locality Dasypterus ega xanthinus Thomas, 1897: 544; type locality
“Puna Island,” Guayas, Ecuador. “Sierra Laguna,” Baja California, Mexico.
Dasypterus ega panamensis: Cabrera, 1958: 115; part; not D[asypterus]. xanthinus: Miller, 1902: 392; name combination.
Dasypterus ega panamensis Thomas, 1901. [Lasiurus (Dasypterus) ega] xanthinus: Trouessart, 1904: 86;
Lasiurus ega fuscatus Handley, 1960: 474; name combination. name combination.
D. e. panamensis Thomas, 1901 Lasiurus ega xanthinus: Handley, 1960: 474; name
Synonyms: combination.
Dasypterus ega panamensis Thomas, 1901a: 246; type local- Nycteris ega xanthina: Hall, 1981: 221; name combination.
ity “Bogava, Chiriqui, Panama. Altitude 250 m.” Lasiurus xanthinus: Baker et al., 1988: 11. (Although never
[Lasiurus (Dasypterus) ega] panamensis: Trouessart, 1904: formally elevated to specific status, the suggestion by Baker
86; name combination. et al. has been followed by many.)
BAIRD ET AL.—MOLECULAR SYSTEMATICS OF TREE BATS 1269

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Smithsonian National Zoological Park and Molly Hagemann Barquez, R. M., M. A. Mares, and J. K. Braun. 1999. The bats of
of the Bishop Museum for providing specimens of Hawaiian Argentina. Special Publications, Museum of Texas Tech University
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BAIRD ET AL.—MOLECULAR SYSTEMATICS OF TREE BATS 1273

Appendix I
List of samples used. General localities are given. GenBank accession numbers for each locus are provided. Empty cells indicate that a
particular sample was not sequenced for that locus.

Genus Species Tissue voucher Locality ND1 Cytb ND2 DBY


Lasiurus atratus F39221 Guyana KT148975
Lasiurus atratus F40753 Guyana KT148976
Lasiurus atratus F54400 Guyana KT148977 KP341704 KT149070 KT149115
Lasiurus blossevillii AK13464 Argentina KT148998 KP341705 KT149071
Lasiurus blossevillii AK15150 Argentina KT148999 KT149072
Lasiurus blossevillii F44348 Brazil KT148900 KP341706 KT149073 KT149116
Lasiurus blossevillii F44354 Brazil KT149001 KP341707 KT149074 KT149117
Lasiurus blossevillii F54778 Suriname KT149002 KT149075 KT149118
Lasiurus borealis AK10319 no data KP341708

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Lasiurus borealis AK10347 Texas KT148980
Lasiurus borealis AK10348 Texas KT148981
Lasiurus borealis AK10353 Texas KT148982
Lasiurus borealis AK21072 Kansas KT148983 KP341709 KT149076
Lasiurus borealis AK21073 Kansas KT148984 KP341710 KT149077 KT149124
Lasiurus borealis AK7214 Illinois KT148978 KT149122
Lasiurus borealis AK7215 Illinois KT148979 KT149123
Lasiurus borealis ASK1084 Texas KT148985
Lasiurus borealis ASK1085 Texas KT148986
Lasiurus borealis ASK1086 Texas KT148987
Lasiurus borealis ASK1087 Texas KT148988
Lasiurus borealis ASK3512 Texas KT148989
Lasiurus borealis NK16707 Oklahoma KT148990
Lasiurus borealis NK16710 Oklahoma KT148991
Lasiurus borealis SP1900 W. Virginia KT148994
Lasiurus borealis SP2255 W. Virginia KT148995
Lasiurus borealis SP2264 W. Virginia KT148996
Lasiurus borealis SP2267 W. Virginia KT148997
Lasiurus borealis SP920 W. Virginia KT148992
Lasiurus borealis SP921 W. Virginia KT148993
Lasiurus cinereus AK10350 Texas KT149022 KT149132
Lasiurus cinereus AK11006 Queretaro KT149023 KP341711 KT149103
Lasiurus cinereus AK11012 Queretaro KT149133
Lasiurus cinereus AK11013 Queretaro KT149068 KP341712 KT149112
Lasiurus cinereus AK11014 Queretaro KT149024 KP341713 KT149078 KT149134
Lasiurus cinereus AK11097 Queretaro KT149062 KP341714 KT149106
Lasiurus cinereus AK11210 Queretaro KP341715
Lasiurus cinereus AK11212 Queretaro KT149063 KP341716 KT149114
Lasiurus cinereus AK13938 Argentina KT149032 KT149079
Lasiurus cinereus AK21410 Arizona KT149025
Lasiurus cinereus ASK1079 Texas KT149064 KP341717 KT149110
Lasiurus cinereus ASK3520 Texas KT149066 KP341718 KT149109
Lasiurus cinereus BPBM178144 HI: Hawaii KT149027
Lasiurus cinereus BPBM178452 HI: Hawaii KT149028 KP341719
Lasiurus cinereus BPBM178453 HI: Hawaii KT149029 KP341720
Lasiurus cinereus BPBM185003 HI: Maui KT149030 KP341721
Lasiurus cinereus BPBM185245 HI: Hawaii KT149031 KP341722
Lasiurus cinereus BPBM185479 HI: Maui KP341723
Lasiurus cinereus BPBM185538 HI: Hawaii KT149065 KP341724 KT149104
Lasiurus cinereus BPBM185539 HI: Maui KT149058 KP341725 KT149105
Lasiurus cinereus BPBM185541 HI: Maui KT149059 KP341726 KT149102
Lasiurus cinereus NK11502 Bolivia KT149033 KP341727 KT149081 KT149136
Lasiurus cinereus NK3562 New Mexico KT149069 KP341728 KT149108
Lasiurus cinereus NK3563 New Mexico KP341729
Lasiurus cinereus NK3575 New Mexico KT149131
Lasiurus cinereus NK3580 New Mexico KP341730
Lasiurus cinereus NK3599 New Mexico KP341731
Lasiurus cinereus NK3625 New Mexico KP341732
Lasiurus cinereus NK3627 New Mexico KT149067 KP341733 KT149111
Lasiurus cinereus NK3642 New Mexico KP341734
Lasiurus cinereus NK6564 Sonora KP341735
1274 JOURNAL OF MAMMALOGY

Appendix I. Continued
Genus Species Tissue voucher Locality ND1 Cytb ND2 DBY
Lasiurus cinereus NK8096 Baja Cal KT149060 KP341736 KT149113 KT149135
Lasiurus cinereus NK9191 New Mexico KP341737
Lasiurus cinereus NK9250 Sonora KT149061 KP341738 KT149107
Lasiurus cinereus NK9273 Sonora KP341739
Lasiurus ega AK1635 Tamaulipas KT149038 KP341740 KT149094 KT149139
Lasiurus ega AK7636 Belize KT149039
Lasiurus ega AK7693 Belize KT149040 KP341741 KT149140
Lasiurus ega AK7697 Belize KT149042
Lasiurus ega AK7696 Belize KT149041
Lasiurus ega H4043 Tamaulipas KT149043
Lasiurus ega NK12302 Bolivia KT149044 KP341742 KT149142
Lasiurus ega NK15304 Bolivia KT149045 KP341743 KT149095 KT149143

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Lasiurus ega NK22703 Bolivia KT149046 KT149096 KT149144
Lasiurus ega SP12622 Guatemala KT149047 KP341744 KT149097 KT149141
Lasiurus egregius F54345 Guyana KT149034
Lasiurus egregius F54554 Guyana KT149035 KP341745 KT149091 KT149137
Lasiurus egregius F54555 Guyana KT149036
Lasiurus egregius F54845 Suriname KT149037 KP341746 KT149092 KT149138
Lasiurus insularis TK32049 Cuba KT149053 KP341747 KT149098
Lasiurus intermedius AK11121 Tamaulipas KT149049 KT149145
Lasiurus intermedius AK11122 Tamaulipas KT149050 KT149099
Lasiurus intermedius AK11148 Tamaulipas KT149048 KT149100 KT149146
Lasiurus intermedius AK7624 Belize KT149051
Lasiurus intermedius ASK422 Guatemala KT149052 KP341748 KT149101
Lasiurus pfeifferi TK32016 Cuba KT149004 KP341749 KT149082 KT149125
Lasiurus pfeifferi TK32029 Cuba KT149005 KP341750 KT149083 KT149126
Lasiurus pfeifferi TK32056 Cuba KT149006 KT149084
Lasiurus salinae AK15126 Argentina KT149007
Lasiurus seminolus AK10351 Texas KT149010
Lasiurus seminolus AK10354 Texas KT149011
Lasiurus seminolus AK1566 Texas KT149127
Lasiurus seminolus AK1565 Texas KT149008 KP341751 KT149085
Lasiurus seminolus AK21348 Texas KT149012 KP341752 KT149087 KT149129
Lasiurus seminolus AK6912 Texas KT149009
Lasiurus seminolus AK6914 Texas KP341753 KT149086 KT149128
Lasiurus frantzii AK11179 Tamaulipas KP341754 KT149088
Lasiurus frantzii AK11119 Tamaulipas KT149016
Lasiurus frantzii AK11150 Tamaulipas KT149017 KT149119
Lasiurus frantzii AK1637 Tamaulipas KT149015
Lasiurus frantzii F34141 Guatemala KT149018
Lasiurus frantzii F34142 Guatemala KT149019 KP341755 KT149089 KT149120
Lasiurus frantzii F34143 Guatemala KT149020
Lasiurus frantzii F38183 Panama KT149021 KT149121
Lasiurus varius AK16070 Argentina KT149013 KP341756 KT149090 KT149130
Lasiurus varius AK16089 Argentina KT149014
Lasiurus xanthinus AK21099 Texas KT149054
Lasiurus xanthinus NK11102 New Mexico KT149055
Lasiurus xanthinus NK11103 New Mexico KT149056 KP341757 KT149093 KT149147
Lasiurus xanthinus NK3579 Sonora KT149057

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