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checkCIF (full publication check) running

Checking for embedded fcf data in CIF ...


No extractable fcf data in found in CIF

checkCIF/PLATON (full publication check)

Structure factors have been supplied for datablock(s) absx

THIS REPORT IS FOR GUIDANCE ONLY. IF USED AS PART OF A REVIEW PROCEDURE FOR
PUBLICATION, IT SHOULD NOT REPLACE THE EXPERTISE OF AN EXPERIENCED
CRYSTALLOGRAPHIC REFEREE.

No syntax errors found. CIF dictionary


Please wait while processing .... Interpreting this report
Structure factor report

Datablock: absx
Bond precision: C-C = 0.0088 A Wavelength=0.71073
Cell: a=10.776(2) b=18.466(4) c=11.745(2)
alpha=90 beta=106.74(3) gamma=90
Temperature: 101 K
Calculated Reported
Volume 2238.1(8) 2238.2(9)
Space group P 21/c P 1 21/c 1
Hall group -P 2ybc -P 2ybc
Moiety formula C10 Br2 N O3 Re, C8 H20 N Br2 C10 N O3 Re, C8 H20 N
Sum formula C18 H20 Br2 N2 O3 Re C18 H20 Br2 N2 O3 Re
Mr 658.37 667.46
Dx,g cm-3 1.954 1.981
Z 4 4
Mu (mm-1) 9.018 9.018
F000 1244.0 1276.8
F000' 1238.62
h,k,lmax 14,24,15 14,24,15
Nref 5584 5533
Tmin,Tmax 0.044,0.486 3.230,
Tmin' 0.016
Correction method= # Reported T Limits: Tmin=3.230
Tmax=***** AbsCorr = MULTI-SCAN
Data completeness= 0.991 Theta(max)= 28.320
wR2(reflections)=
R(reflections)= 0.0340( 4518)
0.0978( 5533)
S = 1.048 Npar= 268

The following ALERTS were generated. Each ALERT has the format
test-name_ALERT_alert-type_alert-level.
Click on the hyperlinks for more details of the test.

Alert level B
PLAT043_ALERT_1_B Calculated and Reported Mol. Weight Differ by .. 9.09 Check
PLAT972_ALERT_2_B Check Calcd Resid. Dens. 0.88Ang From Re1 -3.02 eA-3
And 3 other PLAT972 Alerts
More ...

Alert level C
ABSTY02_ALERT_1_C An _exptl_absorpt_correction_type has been given without
a literature citation. This should be contained in the
_exptl_absorpt_process_details field.
Absorption correction given as multi-scan
CHEMW01_ALERT_1_C The ratio of given/expected molecular weight as calculated
from the _chemical_formula_sum lies outside
the range 0.99 <> 1.01
Calculated formula weight = 658.3756
Formula weight given = 667.4560
CHEMW01_ALERT_1_C The difference between the given and expected weight for
compound is greater 1 mass unit. Check that all hydrogen
atoms have been taken into account.
PLAT042_ALERT_1_C Calc. and Reported MoietyFormula Strings Differ Please Check
Calc: C10 Br2 N O3 Re, C8 H20 N
Rep.: Br2 C10 N O3 Re, C8 H20 N
PLAT044_ALERT_1_C Calculated and Reported Density Dx Differ by .. 0.0271 Check
PLAT068_ALERT_1_C Reported F000 Differs from Calcd (or Missing)... Please Check
PLAT342_ALERT_3_C Low Bond Precision on C-C Bonds ............... 0.00875 Ang.
PLAT905_ALERT_3_C Negative K value in the Analysis of Variance ... -0.437 Report
PLAT910_ALERT_3_C Missing # of FCF Reflection(s) Below Theta(Min). 7 Note
1 0 0, 1 1 0, 0 2 0, 1 2 0, -1 1 1, 0 1 1,
0 2 1,
PLAT911_ALERT_3_C Missing FCF Refl Between Thmin & STh/L= 0.600 18 Report
10 0 0, 11 0 0, 12 0 0, 10 1 0, 11 1 0, 12 1 0,
10 1 1, 11 1 1, 12 1 1, 11 2 1, 12 2 1, 10 0 2,
11 0 2, 10 1 2, 11 1 2, 10 1 3, 11 1 3, 11 3 3,
PLAT934_ALERT_3_C Number of (Iobs-Icalc)/Sigma(W) > 10 Outliers .. 1 Check
1 1 1,
PLAT971_ALERT_2_C Check Calcd Resid. Dens. 0.77Ang From Re1 2.42 eA-3
PLAT971_ALERT_2_C Check Calcd Resid. Dens. 0.84Ang From Re1 2.40 eA-3
PLAT973_ALERT_2_C Check Calcd Positive Resid. Density on Re1 1.43 eA-3
PLAT975_ALERT_2_C Check Calcd Resid. Dens. 0.92Ang From N1 . 0.96 eA-3
PLAT975_ALERT_2_C Check Calcd Resid. Dens. 0.93Ang From N1 . 0.91 eA-3

Alert level G
PLAT002_ALERT_2_G Number of Distance or Angle Restraints on AtSite 15 Note
PLAT073_ALERT_1_G H-atoms ref, but _hydrogen_treatment Reported as constr Check
PLAT176_ALERT_4_G The CIF-Embedded .res File Contains SADI Records 18 Report
PLAT191_ALERT_3_G A Non-default SADI Restraint Value has been used 0.0400 Report
And 9 other PLAT191 Alerts
More ...
PLAT301_ALERT_3_G Main Residue Disorder ..............(Resd 1) 41% Note
PLAT315_ALERT_2_G Singly Bonded Carbon Detected (H-atoms Missing). C17 Check
PLAT315_ALERT_2_G Singly Bonded Carbon Detected (H-atoms Missing). C10 Check
PLAT769_ALERT_4_G CIF Embedded Explicitly Supplied Scattering Data Please Note
PLAT779_ALERT_4_G Suspect or Irrelevant (Bond) Angle(s) in CIF ... 24.50 Deg.
C4 -N1 -C11 1_555 1_555 1_555 ...... # 20 Check
PLAT790_ALERT_4_G Centre of Gravity not Within Unit Cell: Resd. # 2 Note
C8 H20 N
PLAT811_ALERT_5_G No ADDSYM Analysis: Too Many Excluded Atoms .... ! Info
PLAT860_ALERT_3_G Number of Least-Squares Restraints ............. 36 Note
PLAT912_ALERT_4_G Missing # of FCF Reflections Above STh/L= 0.600 29 Note
PLAT933_ALERT_2_G Number of HKL-OMIT Records in Embedded .res File 7 Note
-1 1 1, 0 1 1, 0 2 0, 0 2 1, 1 0 0, 1 1 0,
1 2 0,
PLAT960_ALERT_3_G Number of Intensities with I < - 2*sig(I) ... 14 Check
PLAT969_ALERT_5_G The 'Henn et al.' R-Factor-gap value ........... 2.11 Note
Predicted wR2: Based on SigI**2 4.64 or SHELX Weight 9.56
PLAT978_ALERT_2_G Number C-C Bonds with Positive Residual Density. 0 Info
PLAT982_ALERT_1_G The Br-f'= -0.3819 Deviates from IT-value = -0.2901 Check
PLAT982_ALERT_1_G The Re-f'= -0.9346 Deviates from IT-value = -1.0185 Check
PLAT983_ALERT_1_G The Br-f"= 2.4662 Deviates from IT-Value = 2.4595 Check
PLAT983_ALERT_1_G The Re-f"= 7.2592 Deviates from IT-Value = 7.2310 Check

0 ALERT level A = Most likely a serious problem - resolve or explain


5 ALERT level B = A potentially serious problem, consider carefully
16 ALERT level C = Check. Ensure it is not caused by an omission or oversight
30 ALERT level G = General information/check it is not something unexpected

12 ALERT type 1 CIF construction/syntax error, inconsistent or missing data


14 ALERT type 2 Indicator that the structure model may be wrong or deficient
18 ALERT type 3 Indicator that the structure quality may be low
5 ALERT type 4 Improvement, methodology, query or suggestion
2 ALERT type 5 Informative message, check

checkCIF publication errors


Alert level A
PUBL004_ALERT_1_A The contact author's name and address are missing,
_publ_contact_author_name and _publ_contact_author_address.
PUBL005_ALERT_1_A _publ_contact_author_email, _publ_contact_author_fax and
_publ_contact_author_phone are all missing.
At least one of these should be present.
PUBL006_ALERT_1_A _publ_requested_journal is missing
e.g. 'Acta Crystallographica Section C'
PUBL008_ALERT_1_A _publ_section_title is missing. Title of paper.
PUBL009_ALERT_1_A _publ_author_name is missing. List of author(s) name(s).
PUBL010_ALERT_1_A _publ_author_address is missing. Author(s) address(es).
PUBL012_ALERT_1_A _publ_section_abstract is missing.
Abstract of paper in English.

7 ALERT level A = Data missing that is essential or data in wrong format


0 ALERT level G = General alerts. Data that may be required is missing

Publication of your CIF

You should attempt to resolve as many as possible of the alerts in all categories. Often the minor alerts point
to easily fixed oversights, errors and omissions in your CIF or refinement strategy, so attention to these fine
details can be worthwhile. In order to resolve some of the more serious problems it may be necessary to
carry out additional measurements or structure refinements. However, the nature of your study may justify
the reported deviations from journal submission requirements and the more serious of these should be
commented upon in the discussion or experimental section of a paper or in the "special_details" fields of the
CIF. checkCIF was carefully designed to identify outliers and unusual parameters, but every test has its
limitations and alerts that are not important in a particular case may appear. Conversely, the absence of
alerts does not guarantee there are no aspects of the results needing attention. It is up to the individual to
critically assess their own results and, if necessary, seek expert advice.

If level A alerts remain, which you believe to be justified deviations, and you intend to submit this CIF for
publication in a journal, you should additionally insert an explanation in your CIF using the Validation Reply
Form (VRF) below. This will allow your explanation to be considered as part of the review process.
Validation response form

Please find below a validation response form (VRF) that can be filled in and pasted into your CIF.

# start Validation Reply Form


_vrf_PUBL004_GLOBAL
;
PROBLEM: The contact author's name and address are missing,
RESPONSE: ...
;
_vrf_PUBL005_GLOBAL
;
PROBLEM: _publ_contact_author_email, _publ_contact_author_fax and
RESPONSE: ...
;
_vrf_PUBL006_GLOBAL
;
PROBLEM: _publ_requested_journal is missing
RESPONSE: ...
;
_vrf_PUBL008_GLOBAL
;
PROBLEM: _publ_section_title is missing. Title of paper.
RESPONSE: ...
;
_vrf_PUBL009_GLOBAL
;
PROBLEM: _publ_author_name is missing. List of author(s) name(s).
RESPONSE: ...
;
_vrf_PUBL010_GLOBAL
;
PROBLEM: _publ_author_address is missing. Author(s) address(es).
RESPONSE: ...
;
_vrf_PUBL012_GLOBAL
;
PROBLEM: _publ_section_abstract is missing.
RESPONSE: ...
;
# end Validation Reply Form
If you wish to submit your CIF for publication in Acta Crystallographica Section C or E, you should upload
your CIF via the web. If you wish to submit your CIF for publication in IUCrData you should upload your CIF
via the web. If your CIF is to form part of a submission to another IUCr journal, you will be asked, either
during electronic submission or by the Co-editor handling your paper, to upload your CIF via our web site.

PLATON version of 06/01/2024; check.def file version of 05/01/2024

Datablock absx - ellipsoid plot


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