Professional Documents
Culture Documents
Das2015 1
Das2015 1
Acta Astronautica
journal homepage: www.elsevier.com/locate/actaastro
a r t i c l e i n f o abstract
Article history: Although experiments suggested that silica may help in early chemical evolution on Earth,
Received 5 November 2013 however, their exact role in genesis of life is still unknown. In this experiment silicon
Received in revised form utilizing specific coacervates was developed in a reaction mixture under solar energy with
3 November 2014
chemicals which are commonly present in GMCs, comets, and asteroids. When these
Accepted 18 November 2014
coacervates were applied on a thin silica layer they were converted into multiplying
structures morphologically similar to primitive algae. Under an electron microscope they
Keywords: found morphologically similar to the cells which were present in rain water in Kerala in
Coacervates 2001 after a meteor airburst. These proto-algae like bodies thus may mimic the common
Silicon
ancestor of life on the Earth. Similarly these specific coacervates may originate sponta-
Proto-cocci
neously in GMCs and are transferred throughout the universe by various routes to initiate
Origin of life
life processes on suitable surfaces. Thus they may be found in the stratosphere of the
Earth; however, as they could not penetrate the tropopause in the present atmosphere
they may not be found on earth surface except in rare conditions like volcanic eruptions,
blue lightning etc. Thus this simple study may support the famous panspermia theory and
we should search for possible biosignatures of these peculiar bodies throughout the
cosmos.
& 2014 IAA. Published by Elsevier Ltd. All rights reserved.
http://dx.doi.org/10.1016/j.actaastro.2014.11.028
0094-5765/& 2014 IAA. Published by Elsevier Ltd. All rights reserved.
Please cite this article as: S. Das, A possible spontaneous generation of silicon utilizing minimal containers as precursors
of life in the cosmos, Acta Astronautica (2014), http://dx.doi.org/10.1016/j.actaastro.2014.11.028i
2 S. Das / Acta Astronautica ] (]]]]) ]]]–]]]
of Bahadur in between 1954 and 1957 indicated possible agriculture to improve crops. Magnesium is the second most
formation of amino acids even in the present physico- common intracellular cation. Magnesium is essential for solar
chemical conditions on the earth [3]. Afterwards Bahadur energy dependent reactions in plants, and an important
and Ranganayaki could demonstrate formation of coacervates cofactor for enzymatic reactions. Sulfur is an important
along with ribose, deoxyribose, glucose and fructose in a micronutrient. Molybdenum is widely used in catalysis and
similar system [4–9]. However, the results of these experi- used in this experiment as a catalyst. It helps in nitrogen
ments were not accepted by many scientists as the coacer- fixation and plays an important role in nutrition of living
vates failed to grow in subcultures. In recent past, many beings. It is an essential trace element in plants and animals
experiments have already been done on the origin of for proper functioning of molybdoenzymes.
proteins, membrane, RNA and DNA [11,29], in relation to Ammonium salts – ammonium molybdate and diammo-
the origin of life on the Earth, but still there is no integrated nium hydrogen phosphate were used as sources of nitrogen
speculation on origin of life. In this experiment a salt-silicate- and for buffering action with potassium dihydrogen phos-
molybdate-formalin medium was used to produce modified phate. Ammonium compounds also stabilize osmotic pres-
coacervates so that they could grow in subcultures on silica sure in cells. Formaldehyde used in the medium was the
surface containing a thin film of an algae culture medium. first polyatomic organic molecule detected in the outer
space and is found in many extraterrestrial bodies and in
2. General methods giant molecular clouds. In atmosphere, methane is con-
verted into formaldehyde. It is also ubiquitous in living
2.1. Media used in this experiment and general study organisms in trace amounts which occur due to metabolism
procedures of endogenous amino acids. It was used in this experiment
as a source of carbon.
2.1.1. Salt-molybdate-formalin medium
This is a slightly modified Krishna Bahadur's medium [6] 2.1.2. Salt-silicate-molybdate-formalin medium
resulting better yield of coacervates and was used as a control This test medium was developed following our previous
medium in this experiment. The medium was comprised of experiments indicating that silicon utilizing organisms could
potassium dihydrogen phosphate (KH2PO4) 0.5 g and mag- tolerate different stresses and they could grow slightly with-
nesium sulfate (MgSO4) 0.07 g mixed with 50 mL distilled out any carbon source in the medium [12–16], although trace
water in a glass flask (in plastic flask only scanty growth was amounts of carbon should always be present in such a
found), followed by addition of 10 mL ammonium molybdate system. We also inclined to develop such a medium as we
(4% w/v) and 20 mL diammonium hydrogen phosphate came to know that all isolated cultivable organisms from
(3% w/v) with it. The mixture was then sterilized at 15 lb stratosphere [31,32] and the suspected extraterrestrial organ-
pressure for 15 min and then 10 mL formalin (36% formalde- isms found in the red rain of Kerala [25] contained high
hyde) was added with it. It was then exposed to direct amounts of silica and thus formally may be categorized under
sunlight in clear days ( 1368 W m 2 or 1.95 cal cm2 min 1 “silicon utilizing organisms” [16] group. This medium was
solar radiation per second) in between 7 a.m. and 9.30 a.m. comprised of potassium dihydrogen phosphate (KH2PO4)
and then to filtered sunlight passing through a colorless 25 g and magnesium sulfate (MgSO4) 0.175 g mixed with
frosted glass in between 2 p.m. and 4.30 p.m. for 4 days. The 50 mL distilled water; 18 mL of this solution was then mixed
solution was kept at room temperature ( 20–25 1C) in a cool with 18 mL sodium metasilicate solution (11.8 g/dL) and
dark place in between the exposures to sunlight. Intervals autoclaved at 15 lb pressure for 15 min. It was then partially
between the exposures in a day were allowed so that after neutralized with 5 mL sterilized phosphoric acid (16% v/v) to
2½ h of chemical reaction the formed granules could settle keep it in a liquid state consisting of silicon di-oxide (SiO2),
down permitting better reaction in the second half; filtered sodium phosphate and unperturbed sodium metasilicate in
sunlight was used to protect living cells from scorching its usual form. Then sterile10 mL ammonium molybdate (4%
afternoon sunshine. Thus the mixture was exposed to sun- w/v) solution and 20 mL diammonium hydrogen phosphate
light for a total period of 20 h in 4 days. The average (3% w/v) solution were mixed with it one after another and
maximum atmospheric temperature was 36 1C and mini- finally 10 mL formalin (36% formaldehyde) was added. It was
mum temperature was 24 1C; the average specific humidity exposed to direct sunlight as described in Section 2.1.1. All
was 73%. The experiment was repeated in different lots and chemicals used in this experiment were of AR/GR grade.
all together it was repeated more than 50 times and in each Sodium metasilicate⧸phosphoric acid neutralization was stan-
lot control solutions were used which were not exposed to dardized in each lot, approximately 80% quantity of the total
sunlight. volume of the acid which was required for neutralization and
Although most of the constituents of this medium were solidification was used for partial neutralization.
derived from Krishna Bahadur's medium [6], the rationality of
addition of the component chemicals was considered before 2.2. Morphological study of the coacervates
the experiment. Thus potassium dihydrogen phosphate was
used as a source of phosphorus and potassium and with Granules of coacervates, formed within 2.1.1 and 2.1.2
ammonium salts present in the medium; it also acts as a media were observed directly, by light microscopy and by a
buffering agent and minimizes escape of ammonia from SEM (Scanning electron microscope) and a TEM (Transmis-
the medium. Phosphate component is also important in sion electron microscope). SEM observation was done with a
many metabolic and enzymatic pathways. Magnesium sulfate FEI Quanta 200 NK2 instrument. Two drops of the medium
which is naturally present in mineral water is used in containing the particles were placed on 1 cm 1 cm glass
Please cite this article as: S. Das, A possible spontaneous generation of silicon utilizing minimal containers as precursors
of life in the cosmos, Acta Astronautica (2014), http://dx.doi.org/10.1016/j.actaastro.2014.11.028i
S. Das / Acta Astronautica ] (]]]]) ]]]–]]] 3
slides and the slides were kept for 1 h at room temperature. appeared by second day on the surface of 2.1.1 medium, while
After this the liquid portions were gently decanted off and scum in a continuous sheet appeared on the surface of 2.1.2
then 2% glutaraldehyde (pH 7.0) was added carefully to medium. Within 3 days jet-black coarse deposits were found
cover the whole area where particles were present. The in 2.1.1 medium while in 2.1.2 medium deep brown to golden
slides were then kept on filter papers soaked in water brown fine granular deposits were found. Gradually plenty
overnight at room temperature inside petridishes and then black colored granules were formed in both the media, and
were washed in distilled water gently, and gradually dehy- after 8–10 days granule formation ceased and the granules
drated by keeping the slides serially in 20%, 40%, 60%, 80%, were found firmly attached on the inner side of the flask. The
100%, and 100% ethanol, 10 min in each grade. TEM study control solutions which were not exposed to sunlight rema-
of the coacervates was done with a Jeol JEM-100 Cx instru- ined unchanged throughout the experimental period.
ment on a carbon coated copper grid after staining with 1%
solution of uranyl acetate.
3.2. Microscopic observation
Light microscopy of the cover slip preparation of the
surface scum and the granules was done consecutively from
Blue colored round coacervates were found arranged
second to twentieth days along with the examination of the
mainly in grape like clusters and some were in short
stained smears (Leishman stain) under oil immersion lens.
chains. “Cell wall” like outer coverings were present in
relatively larger coacervates, which also contained many
2.3. Study on the effect of Amphotericin B on the growth of deep color spots throughout their bodies (Fig. 1); however,
the coacervates these spots were more ( 3 times) on the coacervates
of 2.1.2.
Amphotericin B was used, to observe its effect on these There were also “mesosome” like structures in between
coacervates, as there was some resemblance of these the dividing cells along with some budlike structures. The
coacervates with algae. Thus if these are some way related ratio of the diameters between two successive budding
to living creatures like algae then there may be demon- bodies varied between 1.36–1.44:1. There were also evi-
strable antimicrobial activity of Amphotericin B on them. dences of contact guidance and contact inhibition, which
Growth patterns of the uniformly suspended coacervates is commonly found in all normal multiply cells. Besides
in wells of a microtiter plate were studied with the help of these findings in 2.1.2 asteroid bodies (probably few
Ascent software in Thermo iEMS Reader MF and Multiskan crystals of silico-molybdic acid) were present. After fif-
(Vantaa, Finland). In this experiment a similar method was teenth day, “nucleus” like structures were found in all
followed to see the changes in the absorbance of the coacervates along with metacyst like bodies where many
coacervate suspension as the CLSI guidelines for micro- “nuclei” like structures were found within “cytoplasmic
organisms like Candida spp. using 620 nm and 540 nm bodies” (Fig. 2). In 2.1.2 few elongated spindle like struc-
wavelengths with (test) or without (control) different tures (1–2 μm 3–5 μm) were also found along with
concentrations (0.0313, 0.0625, 0.125, 0.25, 0.5, 1, 2, 4, 8 these cells.
and 6 μg/mL) of Amphotericin B (an anti-fungal and anti-
algal drug).
3.3. Electron microscopic observation of the coacervates
2.4. Study on colonization of the coacervates on algae There were two distinct types of coacervates in 2.1.2
culture medium medium, one variety showed larger (2.0–3.0 μm) spherical
bodies (Fig. 3) with central darker area and many irregular
This medium was comprised of sodium nitrate 1.00 g/L, white spots scattered throughout their bodies; the other
dipotassium phosphate 0.25 g/L, magnesium sulfate 0.513 g/L, variety (Fig. 4) was smaller (200–500 nm) and arranged
ammonium chloride 0.05 g/L, calcium chloride 0.058 g/L, singly or in small clumps. Particles of 2.1.1 medium showed
ferric chloride 0.003 g/L, and agar 15.00 g/L, and was pur- bigger clusters (Fig. 5) of coacervates (300–800 nm). There
chased directly from Hi Media (M343). After stroke inocula- was no distinct organelle in any one of them.
tion of the coacervates on slants prepared with this medium,
they were exposed to sunlight as described in Section 2.1.1.
Smears were prepared when colonial growths appeared on
the slants and they were examined by Gram's stain, electron
microscopic studies as described in Section 2.2.
3. Results
Please cite this article as: S. Das, A possible spontaneous generation of silicon utilizing minimal containers as precursors
of life in the cosmos, Acta Astronautica (2014), http://dx.doi.org/10.1016/j.actaastro.2014.11.028i
4 S. Das / Acta Astronautica ] (]]]]) ]]]–]]]
4. Discussion
Please cite this article as: S. Das, A possible spontaneous generation of silicon utilizing minimal containers as precursors
of life in the cosmos, Acta Astronautica (2014), http://dx.doi.org/10.1016/j.actaastro.2014.11.028i
S. Das / Acta Astronautica ] (]]]]) ]]]–]]] 5
Please cite this article as: S. Das, A possible spontaneous generation of silicon utilizing minimal containers as precursors
of life in the cosmos, Acta Astronautica (2014), http://dx.doi.org/10.1016/j.actaastro.2014.11.028i
6 S. Das / Acta Astronautica ] (]]]]) ]]]–]]]
4.4. Possible role of molybdate in the experiment change to protococci, the possible primitive life like structures
occurring on silicon surface appears one of the numerous
In this experiment, molybdenum, an important metal ways to search for origin of life in the Universe.
for evolution of life on the Earth, was used as a catalyst, for
the rapid genesis of the coacervates. Molybdenum usually
helps in nitrogen fixation, thus a deficiency of this metal in
Acknowledgment
the early Earth probably delayed animal life for about 2
billion years. In 2.1.2 medium, silico-molybdic acid may
form by reaction of silica with ammonium molybdate. I would like to acknowledge Dr. Shaun Roy Chowdhuri,
However, this reaction occurs only in acidic medium and if Dept. of Biotechnology, West Bengal University of Tech-
this occurs the solution becomes yellow in color. nology, Kolkata, India and Subhas Maikab, Bose Institute,
Thus this reaction was not important in this experiment Kolkata, India for providing some technical support in
as the 2.1.2 solution remained blue in color, and was this study.
alkaline throughout the experiment. Phosphates present
in the medium could react with ammonium molybdate References
leading to formation of molybdophosphoric acid, which
provided shield to silicates in this medium. [1] A.K. Arora, Kamaluddin, Role of metal oxides in chemical evolution:
interaction of ribose nucleotides with alumina, Astrobiology 9 (2)
(2009) 165–171.
4.5. Importance of the present findings [2] K. Bahadur, Photosynthesis of amino-acids from paraformaldehyde
and potassium nitrate, Nature 173 (1954) 1141.
[3] K. Bahadur, S. Ranganayaki, L. Santamaria, Photosynthesis of amino-
4.5.1. A possibility of extraterrestrial biosphere formation by
acids from paraformaldehyde involving the fixation of nitrogen in
proto-cocci the presence of colloidal molybdenum oxide as catalyst, Nature 182
So far, none of our numerous elaborate experiments (1958) 1668.
[4] K. Bahadur, Synthesis of Jeewanu, units capable of growth, multi-
could demonstrate evidence of life on any extraterrestrial
plication and metabolic activity, Zbl. Bakt. 117 (1964) 575–584.
body, which is probably due to the fact that although the [5] K. Bahadur, Synthesis of Jeewanu, the proto cell, Zbl. Bakt. 121
“seeds” of life- the coacervates are present almost every- (1967) 291–319.
where, essential “environment” for their metaplastic change [6] K. Bahadur, K. Ranganayaki, Photochemical formation of self-
sustaining coacervates, J. Br. Interplanet. Soc. 21 (1970) 813–829.
to proto-cocci is very meager. Thus if we could maintain [7] K. Bahadur, J.L. Gupta, Cytological studies of abiogenically synthe-
a “suitable environment” on a small surface area of an sized Jeewanu, cell-like microstructures, Zbl. Bakt. 127 (1973)
extraterrestrial body, proto-cocci may be developed sponta- 643–648.
[8] K. Bahadur, Photochemical formation of selfsustaining coacervates,
neously from coacervates which appears present every- Proc. Indian Natl. Sci. Acad. 39 (1976) 455–467.
where, leading to development of a biosphere on that [9] K. Bahadur, D.N. Pradhan, Effect of chloramphenicol on the abiogen-
extraterrestrial body. Thus further terraforming processes esis of sugar, Proc. Natl. Acad. Sci. India 49 (1979) 31–36.
[10] J.D. Bernal, The Physical Basis of Life, Routledge and Kegan Paul,
will not be difficult on such a body. London, 1951.
[11] A.S. Burton, N. Lehman, DNA before proteins? Recent discoveries in
4.5.2. A new approach for searching biosignatures nucleic acid catalysis strengthen the case, Astrobiology 9 (2009) 1–6.
[12] A.N. Chakrabarty, S. Das, K. Mukherjee, S.G. Dastidar, D.K. Sen,
We should look for the coacervates as well as the proto-
Silicon (Si) utilization by chemoautotrophic nocardioform bacteria
cocci in all collected extraterrestrial samples and in isolated from human and animal tissue infected with leprosy
searching biosignatures of life, silicon may also be con- bacillus, Indian J. Exp. Biol. 26 (1988) 839–844.
[13] S. Das, S. Mandal, A.N. Chakrabarty, S.G. Dastidar, Metabolism of
sidered in addition to other important life parameters.
silicon as a probable pathogenecity factor for Mycobacterium and
Nocardia Sp., Indian J. Med. Res. 95 (1992) 59–65.
4.5.3. Important role of silicon in genesis of life [14] S. Das, “Silicon utilization”—an important pathogenecity marker of
The results of this experiment indicate an essential Mycobacterium tuberculosis, Jpn. J. Clin. Pathol. 43 (1995) 261.
[15] S. Das, U.K. Chattopadhyay, Role of silicon in modulating the internal
requirement of silicon in genesis of the proto-cocci; thus morphology and growth of Mycobacterium tuberculosis, Indian
probably it may act as a missing link for assembling the J. Tuberc. 47 (2000) 87–91.
macromolecules which may lead to artificial configuration [16] S. Das, Silicon-utilizing organisms may be used in future terraform-
ing of the moon, in: H. Benaroya (Ed.), Lunar Settlements, CRC Press,
of a living cell in the laboratory. Taylor & Francis group, New York, 2010, pp. 679–692.
[17] F. Dyson, Origins of Life, Cambridge University Press, Cambridge, UK,
4.5.4. Opening up of new study areas 1999, 30–91.
[18] G. Ertem, J.P. Ferris, Template – directed synthesis using the hetero-
An important outcome of this experiment appears to be geneous templates produced by montmorillonite catalysis. A possible
the opening of a new domain for future research in relation bridge between the prebiotic and RNA worlds, J. Am. Chem. Soc. 119
to the coacervates and the proto-cocci. (1997) 7197–7201.
[19] J.P. Ferris, G. Ertem, Oligomerization of ribonucleotides on mon-
tmorrillonite : reactions of the 50 -phopho-rimidazolide of adeno-
5. Conclusion sine, Science 257 (1992) 1387–1389.
[20] J.P. Ferris, W.J. Hagan, Adsorption and reaction of adenosine nucleo-
tide on montmorillonite, Orig. Life Evol. Biosph. 17 (1986) 69–84.
How exactly life first originated on the Earth or in the
[21] J.P. Ferris, Kamaluddin, G. Ertem, Oligimerization reactions of deoxy
Universe is still unknown and it will probably remain ribonucleotides on montmorillonite clay: the effect of mononucleotide
unknown forever. The findings of this simple experiment structure, phosphate activation and montmorillonite composition on
may indicate a possible way of origin of life among numerous phophodiester bond formation, Orig. Life Evol. Biosph. 20 (1990)
279–291.
other possibilities. Coacervates originated from salt-silicate- [22] N.N. Greenwood, A. Earnshaw, Chemistry of the Elements,
molybdate-formalin medium followed by their metaplastic Butterworth-Heinemann, Oxford, 1997, 328–366.
Please cite this article as: S. Das, A possible spontaneous generation of silicon utilizing minimal containers as precursors
of life in the cosmos, Acta Astronautica (2014), http://dx.doi.org/10.1016/j.actaastro.2014.11.028i
S. Das / Acta Astronautica ] (]]]]) ]]]–]]] 7
[23] E. Imai, H. Honda, K. Hatori, A. Brack, K. Matsuno, Elongation of [29] C.D. Neish, A. Somogyi, H. Imanaka, J.I. Lunine, M.A. Smith, Rate
oligopeptides in a simulated submarine hydrothermal system, measurements of the hydrolysis of complex organic macromole-
Science 283 (1999) 831–833. cules in cold aqueous solution: implications for prebiotic chemistry
[24] K.H. Lemke, R.J. Rosenbauer, D.K. Bird, Peptide synthesis in early on the early Earth and Titan, Astrobiology 8 (2008) 273–287.
Earth hydrothermal systems, Astrobiology 9 (2) (2009) 140–146. [30] S.M. Parkinson, M. Wainwright, K. Killham, Observations on oligo-
[25] G. Louis, A. Santhosh Kumar, The red rain phenomenon of Kerala and its trophic growth of fungi on silica gel, Mycol. Res. 93 (1989) 529–534.
possible extraterrestrial origin, Astrophys. Sp. Sci. 302 (2006) 175–187. [31] M. Wainwright, N.C. Wickramasinghe, J.V. Narlikar, P. Rajaratnem,
[26] M.N. Mautner, Planetary resources and astroecology—implications Microorganisms cultured from atmospheric air samples obtained at
for space populations and panspermia, Astrobiology 2 (2002) 59–76. 41 km., FEMS Microbiol. Lett. 218 (2003) 161–165.
[27] M. Meng, L. Stievano, J.F. Lambert, Adsorption and thermal con- [32] M. Wainwright, K. Al-Wajeeh, N.C. Wickramasinghe, J.V. Narlikar,
densation mechanisms of amino acids on oxide supports, 1. glycine
Did silicon aid in the establishment of the first bacterium? Int. J. .
on silica, Langmuir 20 (2004) 914–923.
Astrobiol. 2 (2003) 227–229.
[28] S.L. Miller, A production of amino acids under possible primitive
Earth condition, Science 117 (1953) 528–529.
Please cite this article as: S. Das, A possible spontaneous generation of silicon utilizing minimal containers as precursors
of life in the cosmos, Acta Astronautica (2014), http://dx.doi.org/10.1016/j.actaastro.2014.11.028i