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2VanAmburgh - NDF and uNDF
2VanAmburgh - NDF and uNDF
2VanAmburgh - NDF and uNDF
Chazy, NY
NDF analyses
• Nutrition models/software have an input for NDF that Why aNDFom?
is used primarily to calculate energy from available • Hay in a hurry – wide swathing picks up dirt
carbohydrates and effective fiber
• 600‐800 hp choppers and big equipment that
move fast make dust and dirt fly
• Mertens (2002) published the NDF method and gained
AOAC approval – there are many approaches to • Flood irrigation moves soil
measure NDF • Dirt/soil does not solubilize in NDF solution, thus
if not corrected will inflate the NDF content
• We want everyone to use of aNDFom – NDF with • Inflation of the NDF content means the diet as
sulfite and ash correction – we are working to move
formulated is lower in actual NDF – intake and
labs in that direction
rumen health can be compromised
• Sniffen et al. 1992…
~ 5 units 10 units
Distribution of Ash in Legume Silage Distribution of NDF Ash in Haycrop Silage
(CVAS 2010‐2011, Chemistry) (CVAS, 2013)
16%
20% N =2,524 N = 3,765
Ave. = 2.72
18% Ave. = 12.3 14%
St. Dev.= 3.69
16% 12%
Percent of Samples
14%
% of samples
10%
12%
8%
10%
6%
8%
6% 4%
4% 2%
2% 0%
<0.50
1.00
1.50
2.00
2.50
3.00
3.50
4.00
4.50
5.00
5.50
6.00
6.50
7.00
8.00
9.00
10.00
11.00
>12.00
0%
<8 9 10 11 12 13 14 15 16 17 18 19 20 >20
Ash, % NDF Ash
Percent of Samples
20% 20%
15%
15%
10%
10%
5%
5%
0%
<0.25
>5.00
0.50
0.75
1.00
1.25
1.50
1.75
2.00
2.25
2.50
2.75
3.00
3.25
3.50
3.75
4.00
4.25
4.50
4.75
0%
<1 2 3 4 5 6 7 8 9 10 11 >12
NDF Ash NDF Ash
Example of the Impact of Ash Contamination Example of the Impact of Ash Contamination
on NDF and NDF Digestibility Recovery on NDF and NDF Digestibility Recovery
Example of the Impact of Ash Contamination Example of the Impact of Ash Contamination
on NDF and NDF Digestibility Recovery on NDF and NDF Digestibility Recovery
Sample NDF NDFom NDFD30 NDFD30om Sample NDF NDFom NDFD30 NDFD30om
15081‐68 54.6% 48.3% 56.3% 65.9% 15081‐68 54.6% 48.3% 56.3% 65.9%
We have an “Informal Fiber Working Group” that • Nousiainen et al. (2003; 2004)
meets at least once per year around the Cornell Nutrition demonstrated in grasses that the relationship between
Conf. (Cornell, Miner Institute, Univ. of Bologna, Nutreco, lignin and digestibility was highly variable
ADM, Univ. of Parma, most commercial labs, Charlie Sniffen,
Dave Mertens) • This was confirmed by Rinne et al. 2006 on legumes
– methods used to determine this included 288 hr
Mertens proposed a change in name from iNDF to uNDF – in situ (in a bag in the rumen) fermentations
the NDF we call iNDF can digest, just not under • We were/are doing similar work at Cornell
anaerobic conditions, so to say indigestible is a ‐ Working to develop a procedure that
misrepresentation – so we now use uNDF – undigested could be used in a commercial lab
NDF Ph.D. work of Raffrenato (2011)
Corn Silage NDF Digestibility by NDF and Corn Silage NDF Digestibility by NDF and
Lignin Content Lignin Content
NDF, Lignin, NDF, Lignin, NDFD% Est. NDF
%DM %DM %DM %DM (30hr) kd, %h
42.3 3.01 42.3 3.01 42.2 2.63
42.6 3.32 42.6 3.32 44.1 2.90
42.6 3.24 42.6 3.24 44.6 2.92
42.6 3.24 42.6 3.24 50.8 3.60
42.3 3.18
42.3 3.18 56.7 4.36
42.3 3.00
42.3 3.00 57.0 4.30
0.8
• Do they have the same digestion behavior as
aNDFom (% )
forages? 0.6
0.2
0
0 20 40 60 80 100 120
Time (hr)
aNDFom (%)
LnaNDFom (%)
0.6
0.1 uNDF
0.4
dNDF
0.2
0
0.01 0 20 40 60 80 100 120
Time (hr) Time (hr)
0.8
aNDFom (%remaining)
LnaNDFom(% )
0.6
uNDF
0.4
dNDF2
0.2
dNDF1
0
0.1 0 20 40 60 80 100 120
Time (hr)
Time (hr)
to estimate the decay? Wheat Distiller 0.0137 0.0343 0.0626 0.0554 0.0030 0.0342 0.0356 0.0259
Wheat Midds 0.0677 0.0398 0.0333 0.1162 0.0690 0.0115 0.0132 0.0885
Average 0.0614 0.0550 0.0702 0.0761 0.0666 0.0570 0.0507 0.0669
STD 0.0625 0.0483 0.0365 0.0350 0.0491 0.0406 0.0321 0.0343
Selecting time‐points uNDF of Non‐forage Fiber Sources
TP/Intercept 24‐48‐96 15‐48‐96 15‐48‐72 12‐48‐72 9‐48‐96 12‐72‐96 12‐72‐120 12‐48‐120
Beet Pulp 0.033 0.004 0.012 0.042 0.092 0.023 0.027 0.022
1) uNDF is best estimated at 120 of in vitro
Canola Meal 0.040 0.049 0.047 0.038 0.086 0.023 0.026 0.038
Citrus 0.021 0.001 0.017 0.000 0.054 0.018 0.016 0.009 fermentation
Corn Gluten 0.037 0.028 0.039 0.028 0.035 0.033 0.026 0.022
Corn Distiller 0.039 0.031 0.032 0.032 0.064 0.018 0.015 0.027
2) Concentrates feeds are best characterized using a
Corn Germ 0.020 0.101 0.004 0.133 0.201 0.080 0.072 0.094
Rice Hulls 0.242 0.192 0.153 0.128 0.177 0.151 0.111 0.138 two pools model (dNDF + uNDF)
Soy Bean Meal 0.024 0.002 0.006 0.030 0.011 0.014 0.017 0.036
Soy Hulls 0.022 0.026 0.035 0.049 0.023 0.035 0.033 0.031
3) 0, 12, 72, and 120h are the time points to use for
Soy Plus 0.050 0.010 0.042 0.033 0.024 0.013 0.004 0.012
Wheat Distiller 0.023 0.062 0.075 0.043 0.025 0.045 0.047 0.006 non‐forage feeds
Wheat Midds 0.044 0.040 0.009 0.012 0.038 0.034 0.036 0.022
Average 0.050 0.045 0.039 0.047 0.069 0.041 0.036 0.038
STD 0.061 0.054 0.041 0.041 0.061 0.039 0.029 0.039
uNDF Intake, Rumen content and Can we use this to better predict DMI?
Fecal excretion
High CCS Low CCS High BMR Low BMR
High CCS Low CCS High BMR Low BMR uNDF, %DM 9.92% 8.24% 7.57% 6.93%
uNDF uNDFi :
Intake lb/d 5.80 5.27 4.87 4.48 uNDFf 1.00 1.00 1.00 1.00
uNDF uNDFi :
Rumen lb 9.17 8.42 7.63 7.06 uNDFr 0.63 0.63 0.64 0.63
uNDF Fecal uNDFi, uNDF Intake
lb /d 5.80 5.27 4.87 4.48 uNDFf, uNDF Fecal
uNDFr, uNDF Rumen content
Interpretation Perspective
High CCS Low CCS High BMR Low BMR Median
• Need to understand what changes uNDF Rumen content uNDF, %DM 9.92% 8.24% 7.57% 6.93% 7.90%
– 4.48 – 5.80 lbs. or 7% ‐ 10% DMI is significant uNDF Intake lb 5.80 5.27 4.87 4.48 5.07
– Rumen content appears to determine intake and fecal uNDF Rumen,
output of uNDF lb 9.17 8.42 7.63 7.06 8.03
– What causes variation of uNDF Rumen content? uNDF Fecal/d 5.80 5.27 4.87 4.48 5.07
• “Working hypothesis”: the disappearance of the fast and uNDFi:uNDFf 1.00 1.00 1.00 1.00 1.00
slow pools of pdNDF determines volume of uNDF Rumen uNDFi:uNDFr 0.63 0.63 0.64 0.63 0.63
content and capacity along with the “ballast and rumen fill
of the slow and uNDF fractions. Take into account current uNDF% and intake while
rebalancing diet. If you know current capacity based on
current feeds you should be able to optimize better diet.
Calculation of rates and pool sizes using in‐ Corn silage example: NDFdigestibility
vitro 30, 120 and 240 hr NDFD data 1.000
<Time> k1
<iNDF 2r> 0.800
Initial Fast Pool Fast Pool Decay
NDF residue
Stock 2r Fast Pool
Rate 2r
Stock 2r 0.600
0.000
iNDF 2r
0 50 100 150 200 250
time, hrs
Parameters in orange are
Raffrenato et al. 2011
the those to be optimized
Corn silage example: P1+P2+iNDF Corn silage example: fast pool
Larger fast pool appears to result in:
1.000 1.000
Faster eating
P1 Faster ruminal disappearance
0.800 0.800
Higher intakes
NDF residue
NDF residue
P2
0.600 0.600 More ruminal bouyancy
P1
iNDF
0.400 kd=5% 0.400 k1=11%
P1 = 72% NDF
P1+P2+iNDF
0.200 0.200
0.000 0.000
0 50 100 150 200 250 0 50 100 150 200 250
time, hrs time, hrs
Undigested NDF residues of CS, Corn silage uNDF residue after 47h in
Grass silage and Hay Busted Straw situ, laundered and NDF assay
47h in situ followed by washing
machine and NDF processing in
Ankom 10x20 dacron bags using
Ankom fiber analyzer
Miner 2014
Grass silage uNDF residue after 47h in Corn silage example: slow pool
situ, laundered and NDF assay 1.000
Larger Slow and uNDF pools:
0.800 More “ballast”
Greater chewing and rumination
NDF residue
0.600 P2 Lower intake
Slower eating speed
k2=2%,
0.400
P2 = 18.1% NDF
0.200
0.000
0 50 100 150 200 250
time, hrs
Straw (HB) uNDF residue after 47h in Corn silage example: iNDF
situ, laundered and NDF assay 1.000
uNDF
iNDF
0.800
kuNDF=0%,
NDF residue
uNDF = 9.9% NDF
0.600
0.000
0 50 100 150 200 250
time, hrs
NEW VERSION OF THE Rumen sub-model
<Kp fiber by
feed>
Nitrogen
B2 N SI
<K p solids b y
feed>
B1 N SI A2 N SI
Kp liquid
Application of a technology to
improve NDF digestibility
C N Escape B2 N Escap e B1 N Escape A2 N Escape
CNR B2 N R B1 N R A2 N R A1 N R
Rumen volume
IN VENSIM
C N Deg B2 N Deg B1 N Deg A2 N Deg A1 N Sol
Kd A1 N
Kd B2 N Kd B1 N Kd A2 N
Kd C N Average rumen
volume liquid <A1a CHO R>
<Feed N Deg Recycled <B2 CHO R>
Urea N R Rumen DM <A1 b CHO R>
IRC> Rumen volume
percent <B1 CHO R>
p ercent BW
Average Rumen <A1p CHO R>
Volume Total
Composition of peptide and free AA escape O A end sec
Pulse End N Rumen end sec
Feed PAA N
Escape Feed PAA N
SI
Recycled Urea N prop iNDF
Rumen Liquid
Rumen NFC
<A2 CHO R>
<A3 CHO R>
R Deg Rumen volume from
<Kp liq uid>
End N O A Kd Rumen End N flux model <A4 CHO R>
<Kp liquid> End N R Secretion <Kp liquid> iN DF
Secretion <PAA N IRC Total NDF
escape> <C CHO R> <EPZ B1 <EPZ B2
Kd Urea Engulfed>
<B1 N Deg> <B3 fast CHO R> Engulfed >
<B2 N Deg> PAA N R Escap e NH3 N R Escape
<A2 N Deg> End N O A Flow End N Escape N H3 N SI <HPZ A4
End N R Deg
End N SI pdNDF Rumen DM Engulfed>
End N O A End N R Rumen FC
PAA N R NH3 N R proppdNDF <B3 slow CHO PZ engulfed DM <EPZ B3 fast
<C N Deg> Feed N Deg IRC R NH3 N Engulfed>
R>
<Kp solids mean> PAA N Deg Kd PAA N R Absorbed <EPZ B3 slow
<HPZ M Cell NH3 N R Ab <C N R>
<B2 N R> <EPZ C Engulfed>
<EPZ B1 Cell Lysis> NFB K PAA Engulfed>
<End N R Deg> Lysis> <EPZ M Cell uptake
PZ p redation NFC Feed PAA IRC <End N R Deg> <R NFB Cell <B1 N R>
Lysis> Rumen protein Rumen Micro bial
bacteria IRC Growth>
<PAA N End PAA N <EPZ B2 Cell N FB PAA Uptake DM <R NFB CHO
Rumen end N Escape Total p rotozoal NFB N <FB N> <A2 N R> Cells>
<NFB Cell N Engulfed> Lysis> PZ Cell N Lysis NH3 N Uptake R NH3 N Uptake
Engulfed > Protozoal IRC <PZ Cell N Lysis> deg IRC cell lysis PAA N Uptak e R FB <PZ Cell N>
IRC inputs NFC bact N NFB <A1 N R>
inputs <HPZ A4 Cell NFB <End N R> <R FB CHO
<FB Cell N Lysis> <PZ N> required FC N required <R FB Cell <PAA N R> Cells> <PZ N>
PZ rumen PAA PZ lysis PAA IRC Gro wth>
Engulfed> <EPZ Fiber Cell
PZ predation FC consumption IRC Lysis>
bacteria IRC
PZ N SI PZ Cell N N FB Cell N FB Cell N R FB N SI
PZ Cell N Escape FB Cell N Escape
PAA N R IRC Ash EE
PZ Cell N IRC PZ N Engulfed IRC <PAA
PAA N IRC Microbial Ash Microbial EE
PZ Cell N PZ N Engulfed PZ IRC cycling consumption HPZ> Uptake
Incorporated IRC escape Uptake
Escape IRC NFB Cell N <PZ Ash R
PZ PAA N Escape Escape> <R FB EE
<Kp solid s mean> Escape>
PZ PAA Escape PZ N Engulfed FB PAA N
excretion IRC <PZ Kp> PAA N Engulfed Escape
IRC PAA N IRC PAA N Excreted as PAA <R NFB Ash <R FB Ash Ash Escape EE Escape <PZ EE R
<Kp liquid> Incorpo rated N PZ N H3 IRC Deg <Kp liquid> <HPZ predation of <R NFB EE
Uptake R N FB Escape> Escap e> Escape> Escape>
IRC output R NFB N NFB> <PAA N IRC
<Kp solids mean>
PZ NH3 IRC SI escape> <Kp solids by
PAA IRC N Deg PAA IRC uptake <PAA feed>
<PZ N Engulfed R NFB NFB Cell N
PZ N Engulfed consumption EPZ>
Incorporated> Engulfed Feed Ash SI
<End N Escape> Incorpo rated NFB PAA N Feed EE SI
<PZ N Engulfed
Excreted as PAA> Escape <EPZ predation of
<PZ N Engulfed <PAA N Uptake <PAA N Deg> <Feed PAA N
Excreted as NH3> R NFB> Escape> <PAA N IRC NFB>
<End PAA N
Ingredients lb DM % Diet
escape>
<A2 N Escape> Escap e>
so l feed n esc
PZ N Engulfed
PZ N Engulfed
Excreted as NH3 <EPZ R FB N
sol end esc
Fiber carbohydrates
EPZ M Energy Ratio FB N to Total Growth> restriction
EPZ M SI EPZ M Cells Growth EPZ M Energy <C CHO
EPZ M Cell EPZ M Cell Fib er CHO R K B1 CHO mu B1 EPZ PZ NFB N
Engulfment> a EPZ
Escape Growth N required EPZ engulfment allowable growth
PAA N consumption <NFC engulfment EPZ B1 Cell
consumption EPZ <B3 fast CHO adjustment> EPZ B1 CHO
<PZ Kp> <R FB CHO EPZ <EPZ M Cell Defaunate Gro wth
<Yg EPZ> Engulfment> Growth> Deg
EPZ M Cell Lysis EPZ M for Cells> <PZ N > EPZ K d B1 CHO <PZ Kp>
<a EPZ> Growth N consump tion
HPZ B1 CHO
<K EPZ lysis> PAA consumption Engulfment EPZ B1
PAA engulfment <Kd B1 CHO> EPZ B1 Cells EPZ B1 SI
restriction HPZ B1 CHO R Engulfed
N required HPZ EPZ B1 Cell
EPZ M Cell EPZ M mu M CHO EPZ EPZ EPZ M Maint <Ratio EPZ B1 Escape
Non CHO SI EPZ M Cell Non Lysed Degrad ed M engulfed to EPZ B1 EPZ metabo lic rate
EPZ M for Maint <PAA N R> HPZ predation o f relative to bacteria
EPZ B3 slow CHO Lysed Cells>
Maint <EPZ fiber NFB <HPZ A4 Cell
<HPZ M Cell
excretion> <EPZ Fiber Cell <HPZ A4 Cell Growth> B1 CHO R Deg B1 CHO Escape EPZ B1 Escap e EPZ B1 Cell
<B3 slow CHO EPZ M Cell CHO <EPZ Fiber Cell Growth> EPZ B2
<Ratio of EPZ B3 slow Lysis> Kd EPZ M CHO CHO Lysed> <LK PZ N engulfment CHO Lysed Cell Non
R> Lysed CHO Lysed> Ratio EPZ B1 engulfed EPZ B1 Lysed CHO SI
engulfed to EPZ fiber Cells> EPZ M Deg <HPZ M Cell restriction> to EPZ B1 Cells
Proportio n B3 slow <PZ CHO> EPZ B1 Cell Lysis
CHO Lysed> <EPZ B1 Cell <K p solids by
CHO R EPZ B3 slow <EPZ B1 Cell
<C CHO R> EPZ B3 slow CHO CHO Lysed> K d B1 CHO feed> Escape>
HPZ M
Kd A4 CHO A4 CHO R Deg
Ratio HPZ A4 Cells to
HPZ A4 Engulfed
HPZ A4 Cell Lysis
HPZ A4
Lysed
Absorbed
A1a CHO R Ab
A1a CHO Escape
<EPZ B3 slow
Engulfed> Ratio o f EPZ B3 fast
engulfed to EPZ fiber Cells
<EPZ B3 fast
Engulfed> <B3 nfd intake>
CHO R
HPZ A4
Degraded
HPZ Kd A4 CHO mu A4 HPZ
HPZ A4
Gro wth
<PZ NFB N
allowable growth>
<End N R Deg>
NH3 LEN Escape
End N to EN L LEN PAA Escape
Red = Constants and v6.5 inputs Red = Protozoa <ID PZ N> PZ LEN ID
PZ Cell LEN Lysis
LEN PAA
Uptak e N FB
<NH3 N Uptake
uptake
R FB LEN ID
ID R FB N
+ CH4 production
R NFB> R NFB> FB>
<data capture>
<HPZ A4 Growth
Energy>
Feed VFA
N FC CHO ATP
protozoal maintenance
<HPZ A4 CHO
for M aint>
Pink = Rumen nitrogen transactions Excreted as NH3 Growth Energy> Protozo a ATP <R B2 CHO for
CO2 + CH4
growth Ma int>
<EPZ B2 Gro wth Total rumen VFA + N FC CHO ATP
Energy> Rumen N FC VFA + <R A2 CHO for
CO2 + CH4 bacterial maintenance
<data capture>
b ug end esc
EO
total end
per dmi
OMI
Endogenous PAA incorporation into microbes
<PAA N Uptake
R NFB>
PZ EPAA LI PZ EPAA SI PZ Cell EPAA NFB Cell R NFB R NFB
PZ Cell EPAA EPAA LI EPAA LI
PZ EPAA SI Pass EPAA N FB Cell EPAA EPAA SI R NFB EPAA SI
Escape Escape EPAA LI NH3
Pass
<PAA N R>
PZ Engulfed EPAA R NFB EPAA
PZ EPAA LI O ut PZ EPAA Escape Excreted EPAA R Engulfed LI Out EPAA LI Uptak e
<Kp solid s mean> R NFB EPAA
N FB Cell EPAA
<EPAA R> Engulfed Escape <PAA N LI
Uptak e N FB>
<LI transit time>
PZ Engulfed EPAA <PAA N R NFB LI NFB Cell
<EPAA Escape> Incorporated Engulfed > <LI transit time> EPAA
PZ EPAA Fec <EPAA Escape> EPAA Fec
PZ Engulfed EPAA