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Virtual Human Dataset - For ED Section
Virtual Human Dataset - For ED Section
) 49
FEATURE ARTICLE
One goal of a medical school education is to teach the anatomy of the living human. With the exception of some
surface anatomy, the morphology education that goes on during a surgical procedure, and patient observation, live
human anatomy is most often taught by simulation. Medical anatomy courses utilize cadavers to approximate the live
human. Case-based curricula simulate a patient and present symptoms, signs, and history to mimic reality for the
future practitioner. Radiology has provided images of the morphology, function, and metabolism of living humans but
with images foreign to most novice observers. With the Visible Human database, computer simulation of the live
human body will provide revolutionary transformations in anatomical education. Anat. Rec. (New Anat.) 253:49-57,
1998. r 1998 Wiley-Liss, Inc.
In the ideal, a laboratory for teaching gation of these subjects would not The Visible Human Dataset had its
human anatomy would include a nor- perturb their systems in any way. origin in 1986 when the National Li-
mal, living subject for surface inspec- This ideal could be approximated by brary of Medicine (NLM) in its long-
tion, radiological evaluation, and sur- making available to the student a com- range planning foresaw the need for
gical exploration. The subject would puter database that appears, feels, establishing libraries of digital images
be of either sex and of any desired age, smells, and sounds like a living per- that would complement its biographic
and its exact body composition would son. If the teachings of the physiology and factual services (NLM Long-Range
be known for the past, present, and laboratory were integrated with the Plan, 1986). It surmised there would
future. Such an ideal subject would be anatomy of the simulated subject, the be an increasing role for electronically
available to students for study before database could be ‘‘reactive’’ like a represented images in clinical medi-
and throughout their careers. Investi- living person. As we extend the con- cine and biomedical research. A plan-
cept, the database might be rendered ning panel convened by the NLM
dynamic in time as well as space, so Board of Regents to study the matter
the student could witness develop- in 1989 made the following recommen-
Dr. Spitzer is Director of the Center for
Human Simulation at University of Colo-
ment and aging. An anthropological dation: ‘‘NLM should undertake a first
rado School of Medicine, in Denver. He extension of the database could en- project building a digital image library
holds graduate degrees in Nuclear Engi- velop all known human variations and of volumetric data representing a com-
neering and Physical Chemistry and has
worked in the field of medical (radiologi- act as a repository for reporting new plete adult male and female. This Vis-
cal) imaging for over 20 years. He was ones. ible Human Project (VHP) will include
co-principal investigator on the Visible The first need for constructing a digitized photographic images from
Human Project and continues to work in
identifying new uses for that and similar simulator for the living human body, cryosectioning, digital images from
data. Dr. Whitlock is a professor emeri- its structural basis, is already available computerized tomography (CT) and
tus at the University of Colorado School
of Medicine in Denver and a member of in the Visible Human Dataset. For con- magnetic resonance (MR) of cadav-
the Center for Human Simulation. He is vincing simulations, visual images ers.’’1 The project was viewed as a
a past president of the Association of must be provided that closely approxi- cornerstone for future collections of
Anatomy Chairmen and has served on
the National Board of Medical Examin- mate real human anatomy. The Visible related image datasets and digital-
ers and the Radiological Society of Human Dataset is the first collection image libraries.
North America’s task force for cross-
sectional anatomy. With Dr. Spitzer, he
of three-dimensional (volume) data In August 1991, the NLM contracted
was co-principal investigator for phase that can provide such reality for the with the authors at the University of
one of the National Library of Medi- whole body. The data are photo- Colorado School of Medicine to carry
cine’s Visible Human Project. Dr. Whit-
lock is a member of the American Asso- graphic, and therefore their anatomi- out phase one of the VHP. This first
ciation of Anatomists and the Cajal Club. cal integrity (for that of a cadaver) is step included the acquisition of trans-
Grant sponsor: National Library of unquestioned. The final goal, however, verse CT and cryosection images
Medicine; Grant number: N01-LM-1–
3543. is to simulate living human anatomy, throughout the entire body of a repre-
not cadaver anatomy. sentative male and female cadaver.
50 THE ANATOMICAL RECORD (NEW ANAT.) REVIEW
ding receptacle. Adjustable pedestals cadaver specimens. Film images were Dataset is now the most widely circu-
situated in the floor of the chamber taken with 35 mm and 70 mm Rollie- lated compilation of digital human
allowed the block to be mounted flex cameras that were successively anatomy in the world. The image data-
within the cavity so the block’s surface positioned by computer over the base for the two cadavers occupies 64
was parallel to the cryomacrotome’s masked block surface. Polarized gigabytes of pixel-based information,
cutting plane. After this alignment was Strobe lights were used to illuminate making it the largest collection of ana-
achieved, the mold was filled with the the block’s surface during the imaging tomical images ever assembled.
gelatin solution and frozen to 2707C. process. After the three-camera se- Many resources that incorporate the
Slicing of the frozen gelatin-embed- quence was completed, the block sur- data are now available.2 The first gen-
ded specimen commenced by fixing face received a 30–60 s contact expo- eration of products presented the im-
the mold’s base plate to the table of the sure to an aluminum tray containing ages with navigation interfaces (some
cryomacrotome. The aluminum side- dry ice to assure its frozen state prior examples include the Female Visible
walls of the mold were removed, and a to the next cycle. Human CD (1997) from Research Sys-
larger chamber of plywood and Styro- Acquisition of the 1,878 anatomical tems Inc.; Complete Visible Human
foam was constructed into which cross-sectional images at 1 mm inter- Male laserdisc and CDs (1995) from
pieces of dry ice could be placed vals for the Visible Human Male took 9 Gold Standard Media Inc.; Digital Hu-
around the specimen block to main- months. The dataset delivered to the mans (1996) from Multimedia Medi-
tain its frozen state during the cutting NLM included in addition CT, MR, cal Systems; Visible Human Explorer
process. The top surface of the block and radiographic images. Axial MR CD (1997) and Coronal Man: The Vis-
was planed by the desired interval (1 images of the head and neck and coro- ible Human Male Navigator (1995)
mm for the VHM, 0.33 mm for the nal sections through the rest of the from Anatomical Visualization Inc.).
VHF) and continued to an adjacent body were obtained at 4 mm intervals The next generation of educational
chamber for photography. After image and in matricies of 256 pixels by 256 resources incorporated labels: Atlas of
capture, the table and block were pixels. Each pixel has 12 bits of grey the Visible Human Male: Reverse Engi-
moved back to their initial position tone. CT data consisted of axial scans neering of the Human Body (1998)
and raised by the desired interval in through the entire body at 1 mm inter- from Jones and Bartlett, and Cross-
the z axis preparatory to the next cut. vals. CT images are 512 pixels by 512 Sectional Anatomy Tutor CD (1996)
This entire process was initiated and pixels, where each 12 bit pixel value is from Jones and Bartlett. The latest
remotely controlled by a cryomacro- related to electron density of the speci- generation includes fully segmented
tome operator. men at that point. The CT axial images and classified data (Segmented Visible
In the photographic chamber, each have been aligned with the anatomical Human (1997) and Virtual Human
freshly cut surface of the block was cross-sections. (1997) from Gold Standard Media
flushed with compressed air and exam- The Visible Human Female dataset Inc.). Future generations of the image
ined for defects. Uncut fragments of has the same characteristics as the database will include the logic, pro-
tendons, fascia, etc., were removed male with one exception: the axial gression, and supporting material to
and exposed cavities (e.g. sinuses, tra- anatomical images were obtained at give the images dynamic properties
chea, and colon) filled with latex and 0.33 mm intervals instead of 1 mm and convert the image dataset into a
uncut fragments of tendons, fascia, intervals. It took 12 months to obtain learner-centered course for living hu-
etc., were trimmed and removed. the 5,189 anatomical cross-sectional man anatomy.
When the surface was judged to be photographs that comprise the female Among the results achieved at the
suitable for photography, it was dataset. University of Colorado Center for Hu-
sprayed with absolute alcohol and sur- man Simulation (http://www.uch-
rounded with a black mask, slice num- APPLICATION FOR EDUCATION sc.edu/sm/chs) has been the segmenta-
ber, and a calibrated grey scale (Fig. 4). The Visible Human Dataset of over tion and classification of the entire
Digital and photographic images of 13,000 images (including both male VHM Dataset that was completed in
the prepared surfaces were captured and female) is available on the Inter- 1997. Each of the 1,878 images in the
under computer control. The sequence net from the NLM (www.nlm.nih.gov/ VHM Dataset was filtered to enhance
that was used first recorded a digital research/visible/visible_human.html). the contrast of selected tissue inter-
image of the surface with a Leaf cam- Recently three mirror sites have been faces. Edge-detection isolated the high-
era using Leaf software. This image established in Glasgow (vhp.gla.ac.uk contrast edges of selected tissue inter-
was examined on the image acquisi- (FTP ATM connection; vhpe.gla.ac.uk faces. The edge images were then
tion computer’s screen to make sure [FTP Ethernet connectioon]), Milan edited to eliminate computer-gener-
the surface was suitable for film cap- (vhd-mms.cilea.it [FTP connection]) ated edges that were anatomically ir-
ture. If judged satisfactory, it was com- and Singapore (http://vhp.nus.sg). Ac- relevent or missing for each tissue
pressed to a 24 bit image (eight each cess to the data requires a license from type. The result of this process was a
for red, green, and blue) and cropped the NLM (it is also available via the mask image, 16 bits deep, for each of
to anteroposterior dimensions of the Internet). To date, over 800 licenses the 1,878 slices. Eleven bits of the 16
anatomy (2,048 to 1,216 pixels). These have been granted to individuals, com- bit mask image were utilized to assign
digital images later were aligned with panies, and schools in over 30 coun- each of the over 1,200 anatomical ob-
the aid of vertically situated fiduciary tries for use or development of the jects a unique number. A master data-
rods that were embedded with the images. As a result, the Visible Human base of these unique mask numbers
52 THE ANATOMICAL RECORD (NEW ANAT.) REVIEW
Figure 4. a: An air dusting of the newly exposed block surface is done just prior to alcohol and black mask application. b: The fifty-first surface of
the third block (3,051) is shown after surface preparation with the black mask and attached grey scale applied. Note the surrounding blue
gelatin matrix and the blue latex which was poured into exposed cavities.
REVIEW THE ANATOMICAL RECORD (NEW ANAT.) 53
els or polygons) in its path.7,8 Users of the VHM. The primary feedback that duplicates the living human sub-
feel the drag of the scalpel just as in this situation is from an initial ject, a review of methods of teaching
though they were cutting through real inspection and possible palpation of human anatomy and the ways technol-
tissue. Of course, the tissue of the the surface anatomy followed by the ogy is changing them is valuable to
Visible Human must now react as feel of the needle as it penetrates the consider, since one long-term goal is
though it were cut by the scalpel, so joint space. Unlike the clinical world for these simulators to meet or exceed
there are new surfaces where the scal- with real first-time patients, the in- the advantages of these current meth-
pel cut was made. These techniques ternal anatomy of the joint space ods.
are the beginnings of the generalized can be revealed as an aid for the
surgical simulator to be available in student having problems with the Surface Anatomy
the anatomy teaching laboratory of injection.
the future.9 Anatomical instruction utilizing sur-
At the Center for Human Simula- face anatomy, stagnant for many years,
tion (CHS), we have built prototype has tremendous potential for change
Users feel the drag of the based on recent advances in remote
simulators for medical procedures that
utilize this type of serial section data scalpel just as though sensing and computer graphics. Study
of external body surface is possibly the
for dynamic, user-controllable, 3D pre- they were cutting oldest method of human anatomy edu-
sentation and also allow the user to
feel the anatomy through the instru- through real tissue. cation. Many misconceptions about
ments utilized in clinical practice. the human body were based on obser-
Each of these procedures was chosen ● Radial keratotomy. The student is vations of external anatomy. Recent
because of its dependence on a thor- looking through binocular optics, technological innovations in remote
ough understanding of complex 3D closely matching the ophthalmologi- sensing (miniature videocameras and
anatomy or because feeling is a major cal microscope, at a three-dimen- fiber optics), however, provide new
source of feedback to the expert doing sional cornea. During this realistic frontiers for the visualization of body
the procedure. Our prototype simula- display of the anatomy of the eye surfaces, many of them deep within
tors are based on realtime visualiza- (this time not from the Visible Hu- the body of live humans. Topographi-
tion and haptic feedback and to date man), the student utilizes the scal- cally, new surfaces of the body that
include the following. pel to cut along predetermined ra- now can be visualized include those of
dial lines inked on the cornea to the vascular, gastrointestinal, gastro-
● Surgical cutting. The student, hold- urinary, and respiratory systems. With
ing a scalpel handle, can feel each produce the desired visual correc-
tion. The procedure allows the stu- bronchoscopes, laryngoscopes, colono-
tissue interface as a cut is made scopes, and sigmoidoscopes, we are
through the thigh of the Visible Hu- dent to practice the hand-eye coordi-
nation required for this procedure now able to remotely view external
man male (Fig. 6). body surfaces such as the stomach
● Anesthetic block. The student, per- with all the visual and haptic cues
provided in the clinical setting. lining, the carina, or the cardiac
forming a celiac plexus block and sphincter in the living patient. With
holding the injection needle, can These simulators of living human minimal invasion, endoscopes and ar-
feel each tissue interface the needle anatomy will be coupled with others throscopes open up another expanse
encounters in its path from the skin to provide a complete operating room of internal surface anatomy. Interpret-
surface of the T12-L1 area all the environment for team-teaching all the ing and archiving the views of these
way to the neighborhood of the ab- players involved in a given OR proce- surfaces inside the body can provide
dominal aorta. As a simulator, the dure. The future of these theaters will insight for the anatomy student and
goal of the procedure is well de- closely mimic the reality of the cockpit challenges to the ‘‘-oscopist.’’
fined, but the simulator does not used for flight instruction in modern
restrict the user from directing the flight-training schools.
needle into a position far from the Cadaver Dissection
desired target. In the event of a The educational contribution of infor-
TOWARD PERFECTING THE
misdirect, the student can be mation gained through cadaver dissec-
brought back to the proper path or HUMAN SIMULATION tion, where technology seems to play a
allowed to error along a path that, The use of the Visible Human Dataset nominal role, may be determined by
for example, might be more appro- to create a simulator for the human how well a human simulator can dupli-
priate for a renal biopsy. This simu- body requires that each voxel be iden- cate, compete with, or enhance its
lator also incorporates clinically tified and assigned the properties that considerable advantages. Teaching by
available cues such as fluoroscopy characterize that particular tissue. This cadaver dissection has changed very
to confirm the position or misposi- massive task has been started with the little during this century. In general,
tion of the needle (Fig. 7). identification of every voxel in the student teams still participate in dis-
● Arthrocentesis. The student prepar- male database; in some regions, me- section or observe prosected cadavers.
ing for a knee arthrocentesis would chanical properties have also been de- Access to cadaver dissection has be-
choose a syringe and appropriate fined. For one to appreciate the com- come more restricted due to compet-
needle and then be required to cor- plexity of creating a simulator from ing curriculum demands and increased
rectly navigate the knee joint space the segmented and classified database environmental protection costs, even
54 THE ANATOMICAL RECORD (NEW ANAT.) REVIEW
Figure 5. Simulation of a surgical incision in the reconstructed thigh of the Visible Human Male
displays. in real time, the internal anatomy as it is exposed. The virtual scalpel in the image is
haptically interfaced to a real scalpel handle to provide the user with the feel of the cut. Figure 7. In this simulation of a celiac plexus
block, the physician ‘‘feels’’ each tissue as he
inserts the needle toward the target area.
Fluoroscopic localization of the needle can
be seen on the monitor. On successful pen-
etration, he will also feel the pulsation of the
aorta.
cadaver or as a living patient (a user fabrication is close enough to the clini- With the maturation of computer
option). Furthermore, all of the tech- cal situation that the student can prac- technologies, including 3D visualiza-
niques we used or images we saw or tice and learn effectively with such a tion and haptic, audio, and olfactory
tissues we felt could be recorded and simulator. interfaces, combined with volumetri-
analyzed for constructive criticism or Our steps for the creation of a hu- cally defined anatomy such as the Vis-
examination. The important point here man simulator involve the following. ible Humans, we are now able to learn
is that the instructor can see or experi- in immersive environments simulat-
1. Record visible light reflection of
ence exactly what the student saw or ing the reality of the living human
human cadaver tissues from serial
experienced in his or her self-directed body. Computer simulations will sup-
sections like the Visible Human
laboratory. port dynamic systems and are rapidly
Dataset to enable visualization of
Computer simulation when based growing in sophistication and abili-
the anatomy of a human cadaver by
on visible light photographic images ties. The photographic cadaver im-
any means (cross-sections, 3D ren- ages, such as those comprising the
such as those of the Visible Human
derings, physical model reconstruc- Visible Human anatomical volume,
couple, can duplicate not only surface
tion, etc.) will become more sophisticated and
anatomy but also internal anatomy
2. Modify visible light reflections re- more lifelike as the image data is
revealed only by radiology or dissec-
corded in step 1 to simulate the personified with characteristics and
tion in the real world. Most impor-
appearance of live (but inanimate) properties that will bring it ‘‘to life’’ in
tantly, it does not inconvenience or
tissue to enable visualization of the a virtual reality laboratory. This vir-
compromise patient care. Many ad-
anatomy of a live human. tual lab will afford the student an
vances required for these simulators
3. Add mechanical properties to each opportunity to study and interact with
are anticipated to come from other
tissue visualized in step 1 to enable what seems to be the living tissues of a
fields. For example, computer technol-
haptic interaction with the data. human being—all without the hin-
ogy utilized in Hollywood for special
The student can now ‘‘feel’’ any drance of inconveniencing or jeopar-
effects (morphing, 3D rendering, ani-
tissues visualized in step 1 of the dizing living patients or volunteers.
mation, movie colorization) and dy-
human cadaver.
namic feature isolation (rotoscoping)
4. Add physiological properties to each
all contribute to the many tools re-
tissue visualized in step 1 to enable CONCLUSIONS
quired for simulating the scientifically
visualization and haptic interac-
correct human body. The mathemat- The Visible Human Dataset has served
tion with the data as tissues from a
ics and computational speed required as a demonstration that a whole body
selected live human (i.e., enable
for morphing a man into a car may can be prepared in such a way that it
visualization of the beating heart,
someday provide the ability to atrophy can be volumetrically reconstructed
musculoskeletal motion, GI motil-
a muscle or inflame a pancreas. Ren- by computer. The data are being uti-
ity, and respiration either in isola-
dering tools provide the ability for the lized all over the world as a resource
tion or as the student (or teacher)
student to visualize objects in three for human anatomy applications in
perturbs the system).
dimensions from their own perspec- education, modeling, simulation, train-
5. Relate visible light reflection, me-
tive. Animation tools may provide ing, morphometrics, and entertain-
chanical, and physiological proper-
physiological and kinematic exten- ment. Some of these applications dem-
ties of each tissue to age, race,
sions of this database, and coloriza- onstrate the use of the dataset in the
development, disease, and environ-
tion and technology has already con- construction of human simulators. At
ment to enable visualization and
tributed to the process of feature the CU Center for Human Simulation,
haptic interaction with any simu-
extraction from photographic ana- segmentation and classification of the
lated living human, enabling the Virtual Human Male has been com-
tomical images. Theme park entertain-
student to investigate, appreciate, pleted, and prototype simulators for
ment and video arcades will most likely
and understand human diversity. clinical procedures have been con-
drive the haptic interface industry to
make devices that give realistic feeling The first step in this list has begun structed. The implications of com-
at a substantially reduced cost. Of with the Visible Human Project: an puter simulation of the human body
course, the aircraft industry can con- adult human male and a female speci- and technological advances impacting
tribute the maturity of a well-devel- men have been imaged. The extension the teaching of human anatomy are
oped, well-studied, and well-received of the concept to other bodies, includ- anticipated.
utilization of computer simulations ing young female, fetal, and pediatric
for the training of highly skilled profes- specimens, is ongoing at the CU Cen-
sionals. ter for Human Simulation (Fig. 8). We ACKNOWLEDGMENTS
Some major demonstrations of the are now able to ‘‘feel’’ these tissues The authors thank Dr. Donald A.B.
concepts already available for com- through the instruments normally used Lindberg, Director of the NLM, and
puter simulation of medical proce- to interact with such tissues—scalpels, Dr. Michael J. Ackerman, Visible Hu-
dures have convinced us that the hu- needles, and probes. These procedure man Project Officer, for their support.
man body can be duplicated well simulators have provided responses We also thank our team of young
enough to capture the student imagina- judged realistic by experts in their investigators that made this project
tion in situations that simulate human fields of use. Formal evaluation of successful. We especially acknowledge
anatomy and limited physiology. The these simulators is in progress. those citizens who donate their re-
REVIEW THE ANATOMICAL RECORD (NEW ANAT.) 57
mains to medical research and teach- tute of Technology, Artificial Intelligence Reality.’’ Wahington, DC: IOS Press, pp
ing. Laboratory, Technical Report 1696. 224–231.
6 Reinig KD, Rush CG, Pelster HL, Spitzer 10 Spiegel PK (1995) The first clinical x-ray
VM, Heath JA (1996) Real-time visually made in America—100 Years. Am. J. Roent-
and haptically accurate surgical simula- genology 164:241–243.
LITERATURE CITED tion. In Weghorst SJ, Sieburg HB, Morgan These references are not cited in the
KS (eds): ‘‘Health Care in the Informatics
1 National Library of Medicine (U.S.) Board text.
Age.’’ Washington, DC: IOS Press and Ohm-
of Regents (1990) Electronic imaging: Re- sha, pp 542–545. NLM Lister Hill National Center for Bio-
port of the Board of Regents (1990). U.S. 7 Cotin S, Delingette H, Bro-Nielsen M, medical Communications (1988) ‘‘Proceed-
Department of Health and Human Ser- Ayache N, Clément JM, Tassetti V, Mares- ings of a Workshop on 3-D Anatomical
vices, Public Health Service, National Insti- caux J (1996) Geometric and physical repre- Imaging, Bethesda, MD 1988.’’ US Depart-
tutes of Health. NIH Publication 90–2197. ment of Health and Human Services, Pub-
sentations for a simulator of haptic sur-
2 Visible Human Project Conference Pro- gery. In Weghorst SJ, Sieburg HB, Morgan lic Health Service, National Institutes of
ceedings, October 7–8, 1996. KS (eds): ‘‘Health Care in the Informatics Health.
3 Gray H. (1985) ‘‘Anatomy of the Human Age.’’ Washington, DC: IOS Press and Ohm- Spitzer VM, Whitlock DG (1998) ‘‘Atlas of
Body,’’ 13th American ed. Clemente CD sha, pp 139–151. the Visible Human Male: Reverse Engineer-
(ed). Philadelphia: Lee & Febiger. 8 Drebin RA, Carpenter L, Hanrahan P ing of the Human Body.’’ Sudbury, MA:
4 Lorensen WE, Cline HE (1987) Marching (1993) Volume Rendering. The Visual Com- Jones and Bartlett Publishers.
cubes: A high resolution 3D surface con- puter, 8: 425–438. Spitzer VM, Ackerman MJ, Scherzinger
struction algorithm. Computer Graphics 21: 9 Müller W, Grosskopf S, Hildebrand A, AL, Whitlock DG (1996) The visible human
163–169. Malkewitz R, Ziegler R (1997) Virtual real- male: A technical report. Journal of the
5 Reinig KD (1996) ‘‘Haptic Interaction with ity in the operating room of the future. In American Medical Informatics Association
the Visible Human.’’ Massachusetts Insti- Morgan KS (eds): ‘‘Medicine Meets Virtual 3:118–130.