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CONTENTS v

4.4 Complementation Analysis Distinguishes Allelic Phase 168


Mutations in the Same Gene from Lod Score Analysis 169
Mutations in Different Genes 133 Experimen tal Insig ht 5.1 171
Genet ic Ana lysis 4.3 134 Ge ne t ic Analysis 5.3 172
Case Study Complementarion Groups in a Human Genome-Wide Association Studies 172
Cancer-Prone Disorder 136 Linkage Disequilibrium and Evolutionary Analysis 174
Summary 137 • Preparing/or Problem
Solving 138 • Problems 138 Case Study Mapping the Gene for Cystic
Fibrosis 175
Summary 176 • Preparing for Problem

5 Solving 177 • Problems 177

Genetic Linkage and


Mapping in Eukaryotes 145
6
Genetic A nalysis and
5.1 Linked Genes Do Not Assort Mapping in Bacteria and
Independently 146 Bacteriophages 185
Detecting Genetic Linkage 147
The D iscovery of Genetic Linkage 149 6.1 Specialized Methods Are Used for Genetic
Detecting Autosomal Genetic L inkage through Test-Cross Analysis of Bacteria 186
Analysis 150 Bacterial C ulture and G rowth Analysis 186
Cytological Evidence of Recombination 153 Characteristics o f Bacterial Genomes 188
Genet ic Ana lysis 5.1 154 Plasmids in Bacterial Cells 189
Re searc h Te c hniq ue 6.1 189
5.2 Genetic Linkage Mapping Is Based on
Recombination Frequency between 6.2 Bacteria Transfer Genes by
Genes 155 Conjugation 191
T he First Genetic Linkage Map 155 Conjugation Identified 193
Map Units 156 T ransfer of the F Factor 194
Chi-Square Analysis of Genetic L inkage Data 156 Formation of an Hfr C hromosome 196
Hfr Gene Transfer 196
5.3 Three-Point Test-Cross Analysis Maps
Interrupted Mating and Time-of-Entry Mapping 198
Genes 156
Time-of-E ntry Mapping Experiments 198
Identifying Parental , Single-Crossover, and Double-
Crossover Gametes in Three-Point Mapping 157 Ge ne t ic Analysis 6.1 199
Constructing a Three-Point Recombination Map 158 Consolidation of Hfr Maps 200
Determining Gamete Frequencies from Genetic Maps 161 Conjugation wid1 F' Strains Produces Prutial Diploids 201
Correction of Genetic Map Distances 162 Plasmids and Conjugation in Archaea 203
Genet ic Ana lysis 5.2 163 6.3 Bacterial Transformation Produces Genetic
Recombination 203
5.4 Multiple Factors Cause Recombination
to Vary 164 Ge ne t ic Analysis 6.2 204
Sex Affects Recombination 164 Steps in Transformation 205

Recombination Is Dominated by Hot~pot~ 165 Mapping by Transformation 205

Genome Sequence Analysis Reveals Recombination 6.4 Bacterial Transduction Is Mediated


Hot~pot Distribution 166 by Bacteriophages 205
5.5 Human Genes Are Mapped Using Bacteriophage Life Cycles 205

Specialized Methods 166 Generalized Transduction 208


Mapping with Genetic Markers 166 Cotransduction 209
The Inheritance of Disease-Causing Genes L inked to Cotransduction Mapping 209
Genetic Markers 167 Specialized T ransduction 21 1
v1 CONTENTS

6.5 Bacteriophage Chromosomes Are Mapped 7 .3 DNA Re plication Is Semiconservative


by Fine-Structure Analysis 211 and Bidirectional 244
Ge ne t ic Ana lysis 6.3 212 Three Competing Models of Replication 245
Genetic Complementation Analysis 213 The Meselson-Stahl Experiment 245
Intragen ic Recombination Analysis 213 Origin and Directionality of Replication in
Bacterial DNA 247
Deletion-Mapping Analysis 214
Multiple Replication Origins in Eukaryotes 248
6.6 Lateral Gene Transfer Alters Geno mes 214 7 .4 DNA Re plication Precisely Duplicates the
Lateral Gene Transfer and Genome Evolution 2 15 Genetic Material 249
Identifying Lateral Gene Transfer in Genomes 216 DNA Sequences at Replication Origins 249
Case Study The Evo/111io11 ofAntibiotic Resistance Molecular Biology of Replication Initiation 253
and Its Impact 011 Medical Practice 217
Continuous and Discontinuous Strand Replication 253
Summary 2/8 • Prepari11gfor Problem
RNA Primer Removal and Okazaki Fragment
Solving 219 • Problems 219
Ligation 254
Synthesis of Leading and Lagging Strands at the

APPLI CATION A Replication Fork 255


DNA Proofreading 256
Human Hereditary Disease Supercoi ling and Topoisomerases 257
and Genetic Counseling Replication at the Ends of Linear Chromosomes 257
Ge ne tic Analys is 7.2 258
A.1 Hereditary Disease and Disease Genes 225 7 .5 Methods of Molecular Genetic
Types of Hereditary Disease 225 Analysis Make Use of DNA Replication
Genetic Testing and Diagnosis 226 Processes 260
The Polymerase Chain Reaction 261
A.2 Genetic Counseling 227
Separation of PCR Product~ 262
Indicators and Goals of Genetic Counseling 227
Dideoxynucleotide DNA Sequencing 263
Assessing and Commun icating Risks and Options 228
New Generations of DNA Sequencing Technology 266
Ethical Issues in Genetic Medicine 231
Ge ne tic Analys is 7.3 267
Genetic Counseling and Ethical Issues 232
In Closing 233 Case Study DNA Helicase Ge11e M111arions a11d
Problems 234 Human Progeroid Sy11drome 269
Summary 270 • Preparing for Problem
Solvi11g 271 • Problems 271

7
·,~,·
,, .. DNA Structure and 8
Rep Iication 235 Molecu lar Biology of
Transcription and RNA
7 .1 DNA Is the He reditary Molecule of Life 236
Processing 275
Chromosomes Contain DNA 236
A Transformation Factor Responsible for Heredity 236
8.1 RNA Transcripts Carry the Messages of
DNA Is the Transformation Factor 238
Genes 276
DNA ls the Hereditary Molecu le 238
RNA Nucleotides and Structure 276
7 .2 The DNA Double He lix Consists of Experimental Discovery of Messenger RNA 277
Two Complementary and Antiparallel Categories of RNA 278
St rands 240
8.2 Bacterial Transcription Is a Fo ur-Stage
DNA Nucleotides 240 Process 279
The DNA Duplex 241
Bacterial RNA Polymerase 280
Ge ne t ic Ana lysis 7.1 244 Bacterial Promoters 280
CO NTENTS v 11

Transcription Initiation 281 Ribosome Structures 3 17


Genet ic Ana lysis 8.1 283 A Three-Dimensional View of the Ribosome 319

Transcription Elongation and Termination 284 Re sea rch Technique 9 .1 3 19


Transcription Termination Mechanisms 284
9.2 Translation Occurs in Three Phases 320
8.3 Eukaryotic Transcription Is More Translation Initiation 320
Diversified and Complex than Bacterial
Polypeptide Elongation 324
Transcription 286
Ge ne t ic Analysis 9 .1 326
Polymerase II Transcription of mRNA in Eukaryotes 287
Translation Termination 327
Research Techniq ue 8.1 288
Pol 11 Promoter Recognition 289
Detecting Promoter Consensus Element~ 290
9.3 Translation Is Fast and Efficient 327
The Translational Complex 327
Other Regulatory Sequences and Chromatin-Based
Regulation of RNA Pol II Transcription 291 Translation of Polycistronic mRNA 329
RNA Polymerase I Promoters 292
RNA Polymerase Ill Promoters 292 9 .4 The Genetic Code Translates Messenger
Archaeal Promoters and Transcription 292 RNA into Polypeptide 329
The Evolutionary Implications of Comparative The Genetic Code Displays Third-Base Wobble 330
Transcription 293 The (Almost) Universal Genetic Code 331
Ge ne t ic Analysis 9.2 332
8.4 Posttranscriptional Processing Modifies
RNA Molecules 294 Charging tRNA Molecules 333
Capping 5 ' Pre-mRNA 294 Protein Folding and Posttranslational Polypeptide
Processing 333
Polyadenylation of 3' Pre-mRNA 295
The Signal Hypothesis 334
The Torpedo Model of Transcription Termination 296
Introns 296
9.5 Experiments Deciphered the Genetic
Pre-mRNA Splicing 297
Code 334
Splicing Signal Sequences 298
No Overlap in the Genetic Code 335
A Gene Expression Machine Couples Transcription and
Pre-,nRNA Processing 298 A Triplet Genetic Code 336
Alternative Patterns o f RNA Transcription and Alternative No Gaps in the Genetic Code 336
RNA Splicing 30 I Deciphering the Genetic Code 337
Self-Splicing Introns 302 Ge ne t ic Analysis 9 .3 339
Genet ic Ana lysis 8.2 303 Case S tudy Anribiotics and Translarion
Ribosomal RNA Processing 304 /111erference 340
Transfer RNA Processing 304 Summary 340 • Preparing for Problem
Solving 34 / • Problems 342
RNA Editing 307
Case Study Sexy Splicing: Alteniarive mRNA Splicing
and Sex Derermination in Drosophila 307
Summary 308 • Preparing for Problem
Solving 309 • Problems 309
APPLICATION B
Human Genetic Screenin g

9 B.1 Presymptomatic Diagnosis of Huntington's


Disease 348
The Molecu lar Biology Trinucleotide Repeat Expansion 348
of Tra nslation 314 Detecting the Number of Repeat~ 348

9.1 Polypeptides Are Amino Acid Chains That B.2 Newborn Genetic Screening 349
Are Assembled at Ribosomes 3 15 Phenylketonuria and the First Newborn Genetic Test 349
Amino Acid Structure 315 Living with PKU 350
Polypeptide and Transcript Structure 315 The Recommended Uniform Screening Panel 35 I
vm CONTENTS

B.3 Genetic Testing to Identify Carriers 353 10.4 Chromosome Breakage Causes Mutation
Testing Blood Proteins 353 by Loss, Gain, and Rearrangement of
DNA-Based Carrier Screening and Diagnostic Chromosomes 375
Verification 353 Partial Chromosome Deletion 375
Carrier Screening Criteria 353 Unequal Crossover 376
Pharmacogenetic Screening 354 Detecting Duplication and Deletion 377
Deletion Mapping 3 77
B.4 Prenatal Genetic Testing 3 54
Invasive Screening Using Amniocentesis or Chorionic 10.5 Chromosome Breakage Leads
Villus Sampling 354 to Inversion and Translocation
Noninvasive Prenatal Testing 356
of Chromosomes 378
Maternal Serum Screening 356 Chromosome Inversion 378
Preimplantation Genetic Screening 356
Genet ic Analysis 10.3 379
Exper imental Insight 10.1 382
B.5 Direct-to-Consumer Genetic Testing 357
Chromosome Translocation 383
B.6 Opportunities and Choices 359
Problems 359 1 0.6 Eukaryotic Chromosomes Are Organized
into Chromatin 385

10 Chromatin Compaction 386


Histone Proteins and Nucleosomes 386
Eukaryotic Chromosome Higher Order Chromatin Organization and Chromosome
Structure 389
Abnorma lities and Nucleosome Disassembly, Synthesis, and Reassembly
Molecular Organization 361 during Replication 389
Position Effect Variegation: Effect o f Chromatin State on
10.1 Chromosome Number and Shape Vary Transcription 390

among Organisms 36 2 Case Study Human Chromosome Evolution 392


Chromosomes in Nuclei 362 Summary 393 • Preparing for Problem
Solving 394 • Problems 394
Chromosome Visualization 363
Chromosome Banding 364
Heterochromatin and Euchromatin 365

10.2 Nondisjunction Leads to Changes in


11
Chromosome Number 36 6
Gene Mutation, DNA
Chromosome Nondisjunction 366 Repair, and Homologous
Gene Dosage Alteration 366 Recombination 399
Ge net ic Ana lysis 10.1 368
Aneuploidy in Humans 368 11.1 Mutations Are Rare and Random and Alter
Mosaicism 370 DNA Sequence 400
Uniparental Disomy 371 Proof of the Random Mutation Hypothesis 400
Germ-Line and Somatic Mutations 401
10.3 Changes in Euploid Content Lead Point Mutations 401
to Polyploidy 371 Base-Pair Substitution Mutations 401
Causes of Autopolyploidy and Allopolyploidy 37 1 Frameshift Mutations 402
Ge net ic Ana lysis 10.2 372 Regulatory Mutations 402
Consequences of Polyploidy 373 Exper imental Insight 11 .1 404
Po lyploidy and Evolution 374 Forward Mutation and Reversion 405
CON TENTS 1x

11 .2 Gene Mutations May Arise from


Spontaneous Events 405 12
Spontaneous DNA Replication Errors 405 Regulation of Gene
Genet ic Ana lysis 11.1 407 Expression in Bacteria and
Spontaneous Nucleotide Ba~e Changes 409
Bacteriophage 4 39

11.3 Mutations May Be Caused by Chemicals 12.1 Transcriptional Control of Gene


or Ionizing Radiation 4 1o Expression Requires DNA-Protein
Chemical Mutagens 410 Interaction 440
Radiation-Induced DNA Damage 4 12 Negative and Positive Control of Transcription 441
TheAmes Test 413 Regulatory DNA-Binding Proteins 441

12.2 The lac Operon Is an Inducible Operon


11.4 Repair Systems Correct Some DNA
System under Negative and Positive
Damage 415
Control 443
Direct Repair of DNA Damage 4 15
Lactose Metabolism 443
Genet ic Ana lysis 11 .2 41 6
lac Operon Structure 444
DNA Damage-Signaling Systems 419 lac Operon Function 444

11.5 Proteins Control Translesion DNA 12.3 Mutational Analysis Deciphers Genetic
Synthesis and the Repair of Double-Strand Regulation of the lac Operon 447
Breaks 4 20 Analysis of Structural Gene Mutations 447
Translesion DNA Synthe.~is 420 lac Operon Regulatory Mutations 448
Double-Strand Break Repair 420 Molecular Analysis of the lac Operon 45 1
Genetic A n a lysis 12.1 452

11 .6 DNA Double-Strand Breaks Experimental In sig ht 12.1 453


Initiate Homologous Recombination 4 22
The Holliday Model 422 12.4 Transcription from the Tryptophan Operon
The Bacterial RecBCD Pathway 422 Is Repressible and Attenuated 454
The Double-Stranded Break Model of Homologous Feedback Inhibition of Tryptophan Synthesis 455
Recombination 422 Attenuation of the trp Operon 456
Attenuation Mutations 459
Attenuation in Other An1ino Acid Operon Syste ms 459
11. 7 Transposable Genetic Elements Move
throughout the Genome 4 2 5
12.5 Bacteria Regulate the Transcription
The Characteristics and Classification of Transposable
Ele ments 425 of Stress Response Genes and Also
The Mutagenic Effect of Transposition 426
Translation 459
Transposable Elements in Bacterial Genomes 426 Alten1ative Sigma Factors and Stress Response 459
Transposable Elements in Eukaryotic Genomes 427 Genetic A n a lysis 12.2 460
The Discovery of Ds and Ac Element~ in Maize 427 Translational Regulation in Bacteria 461

Genet ic Ana lysis 11 .3 4 28


Drosophila P Elements 429 12.6 Riboswitches Regulate Bacterial
Retrotransposons 430
Transcription, Translation, and mRNA
Stability 462
Case Study Mendel's Peas Are Shaped by Riboswitch Regulation of Transcription 462
Transposition 431
Summary 432 • Preparing for Problem Riboswitch Regulation of Translation 463
Solving 434 • Problems 434 Riboswitch Control of mRNA Stability 464
x CONTE NTS

12.7 Antiterminators and Repressors Control 13.3 RNA-Mediated Mechanisms Control Gene
Lambda Phage Infection of E. coli 464 Expression 498
The Lambda Phage Genome 465 Gene Silencing by Double-Strru1ded RNA 499
Early Gene Transcription 465 Constitutive Heterochromatin Maintenance 50 I
Cro Protein and the Lytic Cycle 466 The Evolution and Applications of RNAi 502
The >,. Repressor Protein and Lysogeny 468 Case S tudy Environmenral Epigenetics 502
Resumption of the Lytic Cycle following Lysogeny Summary 503 • Preparing for Problem
Induction 468 Solving 504 • Problems 504
Case Study Vibrio cholerae-Stress Response Leads
ro Serious l11fecrio11 Through Positive Co111rol of
Transcriprio11 469
Summary 470 • Preparing for Problem
Solving 471 • Problems 471
14
Analysis of Gene Function
by Forward Genetics and
13 Reverse Genetics 507
Regulation of 14.1 Forward Genetic Screens Identify Genes
Gene Expression in by Their Mutant Phenotypes 509
Eukaryotes 476 General Design of Forward Genetic Screens 509
Specific Strategies o f Forward Genetic Screens 509
13.1 Cis-Acting Regulatory Sequences Bind Analysis of Mutageneses 513
Trans-Acting Regulatory Proteins to Control Identifying Interacting and Redundant Genes Using
Eukaryotic Transcription 478 Modifier Screens 5 I4

Overview of Transcriptional Regulatory Interactions in Genet ic Analysis 14.1 515


Eukaryotes 4 79
Integration and Modularity of Eukaryotic Regu latory 14.2 Genes Identified by Mutant Phenotype
Sequences 480 Are Cloned Using Recombinant DNA
Locus Control Regions 481 Technology 516
Enhancer-Sequence Conservation 482 Cloning Genes by Complementation 5 I6
Yeast as a Simple Model for Eukaryotic Genome Sequencing to Detennine Gene
Transcription 482 Identification 5 I7
Insulator Sequences 484
14.3 Reverse Genetics Investigates Gene Action
13.2 Chromatin Remodeling and Modification by Progressing from Gene Identification to
Regulates Eukaryotic Transcription 484 Phenotype 519
PEV Mutations 485 Genome Editing 519
Overview of C hromatin Remodeling and C hromatin Use of Homologous Recombination in Reverse Genetics 522
Modification 486 Use of Insertion Mutants in Reverse Genetics 524
Open and Covered Promoters 486 RNA Interference in Gene Activity 525
Mechanisms of Chromatin Re modeling 487 Reverse Genetics by TILLING 525
Chemical Modifications o f Chromatin 488 Genet ic Analysis 14.2 527
Ge net ic Ana lysis 13.1 490
An Example of Inducible Transcriptional Regulation in 14.4 Transgenes Provide a Means of Dissecting
S. cerevisioe 493 Gene Function 527
Facultative Heterochromatin and Developmental Monitoring Gene Expression with Reporter Genes 528
Genes 494 Enhancer Trapping 53 I
Epigenetic Heritability 494 Investigating Gene Function w ith Chimeric Genes 532
lncRNAs and Inactivation of Eutherian Mrun malian
Case S tudy Reverse Generics and Genetic Redundancy
Female X C hromosomes 496
in Flower Development 533
Genomic Imprinting 497 Summary 535 • Preparing for Problem
Nucleotide Methylation 498 Solving 535 • Problems 535
CON TENTS x1

APPLI CATION
The Genetics
c 15.3 Gene Therapy Uses Recombinant DNA
Technology 579
Two Forms of Gene Therapy 579
Somatic Gene Therapy Using ES Cells 579
of Cancer
Ge n e t ic A n a lys is 15.2 580

C.1 Cancer Is a Somatic Genetic Disease that Is 15.4 Cloning of Plants and Animals Produces
Only Occasionally Inherited 540 Genetically Identical Individuals 583
C.2 What Is Cancer a nd What Are the Case Study Gene Drive Alleles Can Rapidly Spread
Characteristics of Cancer? 540 Through Populations 585
Summary 587 • Preparing for Problem
Progression of Abnonnalitie.~ 540
Solving 588 • Problems 588
The Hallmarks of Cancer Cells and Malignant Tumors 541

C.3 The Genetic Basis of Cancer 543


Single Gene Mutations and Cancer Development 543 16
The Genetic Progression of Cancer Development and Genomics: Genetics
Cancer Predisposition 546
Breast and Ovarian Cancer and the Inheritance of Cancer f rom a Whole-Genome
Susceptibility 548 Perspective 593
C.4 Cancer Cell Genome Sequencing and
Improvements in Therapy 549 16.1 Structural Genomics Provides a Catalog of
The Cancer Genome Atlas 549 Genes in a Genome 594
Epigenetic Irregularities 549 Whole-Genome Shotgun Sequencing 596
Targeted Cancer Therapy 550 Reference Genomes and Resequencing 599
Problems 550 Metagenomics 600
Experimen t a l In sigh t 16.1 601

15 16.2 Annotation Ascribes Biological Function to


Recombinant DNA DNA Sequences 602
Experimental Approaches to Structural Annotation 602
Technology and Its
Computational Approaches to Structural
Applications 552 Annotation 602
Functional Gene Annotation 603
15.1 Specific DNA Sequences Are Identified Resea rch Tech nique 16.1 604
and Manipulated Using Recombinant DNA Related Genes and Protein Motifs 605
Technology 553 Variation in Genome Organization an1ong Species 605
Restriction Enzymes 553 Three Insights from Genome Sequences 606
Expe ri me nta l Ins ig ht 15.1 554
Genet ic Ana lysis 15.1 556 16.3 Evolutionary Genomics Traces the History of
Genomes 607
Molecular Cloning 557
The Tree of Life 608
DNA Libraries 562
Interspecific Genome Comparisons: Gene Content 608
Advances in Altering and Synthesizing DNA Molecules 564
Resea rch Tech nique 16.2 610
15.2 Introducing Foreign Genes into Genomes Ge n e t ic A n a lys is 16.1 614
Creates Transgenic Organisms 565
Interspecific Genome Comparisons: Genome
Expression o f Heterologous Genes in Bacterial and Fungal Annotation 6 15
Hosts 565
Interspecific Genome Comparisons: Gene Order 616
Expe ri men tal Ins ig ht 15.2 569
Transformation of Plant Genomes by Agrobacteriwn 570 16.4 Functional Genomics Aims to Elucidate
Transgenic Animals 574 Gene Function 6 18
Manipulation o f DNA Sequences in Vivo 578 Transcriptomics 6 19
XII CONTE NTS

Other "-omes" and "-omics" 621 Continual DNA Transfer from Organelles 654
Use of Yeast Mutants to Categorize Genes 624 Encoding of Organellar Proteins 655
Genetic Networks 625 The Origin of the Eukaryotic Lineage 656
Case Study Genomic Analysis of lnsec1 Gws Secondary and Tertiary Endosymbioses 656
May Fuel 1he World 627 Case Study 0101oxic Deafiress: A Mirocho11drial
Summary 628 • Preparing for Problem Ge11e-E11viro11me111 ln1erac1io11 658
Solving 628 • Problems 629 Summary 659 • Preparing for Problem
Solving 660 • Problems 660

17
Organellar Inheritance and 18
t he Evolution of Organ ell ar Developmenta I
G enomes 632 Genetics 663
17 .1 Organellar Inheritance Transmits Genes 18.1 Development Is the Building of a
Carried on Organellar Chromosomes 633 Multicellular Organism 664
The Discovery of Organellar Inheritance 633 Cell Differentiation 665
Homoplasmy and Heteroplasmy 634 Patten1 Formation 665
Genome Replication in Organelles 635
Replicative Segregation of Organelle Genomes 635 18.2 Drosophila Development Is a Paradigm
for Animal Development 6 66
17 .2 Modes of Organellar Inheritance Depend The Developmental Toolkit of Drosophila 667
on the Organism 636 Maternal Effects on Pattern Formation 669
Mitochondrial Inheritance in Ma,nmals 637 Coordinate Gene Patterning of the Anterior-Posterior
Ge ne t ic Ana lys is 17.1 639 Ax is 669
Mating Type and Chloroplast Segregation in Do mains of Gap Gene Expression 670
Chlomydomonas 640 Regulation of Pair-Rule Genes 671
Biparental Inheritance in Saccharomyces cerevisioe 641 Specification of Parasegments by Hox Genes 673
Ge ne t ic Ana lys is 17.2 643 Downstrean1Targets of Hox Genes 675
Summary of Organellar Inheritance 644 Hox Genes throughout Metazoans 676
Genet ic A n a lysis 18.1 677
17 .3 Mitochondria Are the Energy Factories of Stabilization of Cellular Memory by Chromatin
Eukaryotic Cells 644 Architecture 678
Mitochondrial Genome Structure and Gene Content 645
Mitochondrial Transcription and Translation 646 18.3 Cellular Interactions Specify Cell Fate 679
Inductive Signaling between Cells 679
17 .4 Chloroplasts Are the Sites of Lateral Inhibition 682
Photosynthesis 648 Cell Death During Development 682
Chloroplast Genome Structure and Gene Content 648
Chloroplast Transcription and Trans lation 649 18.4 " Evolution Behaves Like a Tinkerer" 683
Editing of Chloroplast mRNA 650 Evolution through Co-option 683
Constraints on Co-option 685
17 .5 The Endosymbiosis Theory Explains
Mitochondrial and Chloroplast 18.5 Plants Represent an Independent
Evolution 651 Experiment in Multicellular Evolution 685
Separate Evolution of Mitochondria and Development at Meristems 685
Chloroplasts 651
Combinatorial Homeotic Activity in Floral-Organ
Exp e ri m e ntal In sig ht 17.1 652 Identity 686
CO NTE NTS x 11 1

Genet ic Ana lysis 18.2 689


Case Study Cyclopia and Polydacryly- 20
Dijferent Shh M111ario11s wirh Distinctive Population Genet ics and
Phenorypes 690
Summary 691 • Preparing for Problem Evolut ion at the Popu lation ,
Solving 692 • Problems 692 Species, and M o lecular
Levels 725

19 20.1 The Hardy-Weinberg Equilibrium Describes


the Relationship of Allele and Genotype
G enetic A nalysis of
Frequencies in Populations 726
Quantitative Trait s 696 Populations and Gene Pools 727
The Hardy-Weinberg Equilibrium 727
19.1 Quantitative Traits Display Continuous Detenn ining Autosomal Allele Frequencies in
Phenotype Variation 697 Populations 729
Genetic Potential 697 The Hardy-Weinberg Equilibrium for More than Two
Major Gene Effects 698 Alleles 73 I
Additive Gene Effects 698 The Chi-Square Test of Hardy-Weinberg
Continuous Phenotypic Variation from Multiple Additive Predictions 73 I
Genes 699 Ge ne t ic Analys is 20.1 732
Allele Segregation in Quantitative Trait
Production 70 I 20.2 Natural Selection Operates through
Effects of Environmental Factors on Pbenotypic Differential Reproductive Fitness within
Variation 702 a Population 732
Genet ic Ana lysis 19.1 703 Differential Reproductive Fitness and Relative
Fitness 733
Threshold Traits 704
Directional Natural Selection 733

19.2 Quantitative Trait Analysis Is Statistical 706 Natural Selection Favoring Heterozygotes 735

Statistical Description of Phenotypic Variation 706 Ge ne t ic Analys is 20.2 736


Partitioning Phenotypic Variance 707
Partitioning Genetic Variance 708
20.3 Mutation Diversifies Gene Pools 736
Quantifying the Effects of Mutation on Alle le
Frequencies 737
19.3 Heritability Measures the Genetic Mutation-Selection Balance 737
Component of Phenotypic Variation 708
Genet ic Ana lysis 19.2 709 20.4 Gene Flow Occurs by the Movement
Broad Sense Heritability 7 10 of Organisms and Genes between
Twin Studies 710 Populations 737
Narrow Sense Heritability and Artificial Selection 712 Effects o f Gene Flow 738
Allele Frequency Equilibrium and Equalization 739
19.4 Quantitative Trait Loci Are the
Genes That Contribute to Quantitative 20.5 Genetic Drift Causes Allele Frequency
Traits 7 13 Change by Sampling Error 739
QTL Mapping Strategies 714 The Founder Effect 740
Identification of QTL Genes 7 I6 Genetic Bottlenecks 740
Genome-Wide Association Studies 717
20.6 Inbreeding Alters Genotype Frequencies
Case Study The Generics ofA111ism Spectrum but Not Allele Frequencies 741
Disorders 718
Summary 719 • Preparing for Problem The Coefficient of Inbreeding 74 I
Solving 720 • Problems 720 Inbreeding Depression 743
xiv CONTENTS

20.7 New Species Evolve by Reproductive 0 .5 Human Migrations around the Globe 770
Isolation 743 Europe 770
Ge ne t ic Ana lysis 20.3 744 Australia 771
Processes of Speciation 744
0 .6 Genetic Evidence for Adaptation to New
Reproductive Isolation and Speciation 746
Environments 772
The Molecular Genetics of Evolution in Darwin's
Finches 748 Lactose Tolerance 772
Skin Pigmentation 774
High Altitude 774
20.8 Molecular Evolution Changes Genes and
Genomes through Time 748 0 .7 Domestication of Plants and Animals:
Vertebrate Steroid Receptor Evolution 749 Maize 775
Case Study Sickle Cell Disease Evo/111io11 and Narural
Selec1io11 i11 Humans 750 0 .8 The Future 776
Summary 751 • Prepari11gfor Problem Problems 777
Solving 752 • Problems 753

E
APPLI CATION D .--
--
• a 11•
.l~ • ••
APPLICATION
Forensic Genetics
Human Evolutionary I :

Genetics E.1 CODIS and Forensic Genetic Analysis 780


CODIS History and Markers 780
Electrophoretic Analysis 78 1
0 .1 Genome Sequences Reveal Extent of
Human Genetic Diversity 759 Forensic Analysis Using COD IS 782

SNP Variation in Humans 760 Patemity Testing 784


Individual Identification 785
Variation in CNVs 76 1
Remains Identified following the 9-1 I Attack 785
Identification of the Disappeared in Argentina 786
0 .2 Diversity of Extant Humans Suggests an
African Origin 761 E.2 DNA Analysis for Genealogy, Genetic
Mitochondrial Eve 762 Ancestry, and Genetic Health Risk
Y Chromosome Phylogeny 762 Assessment 786
Autosomal Loci 763 Assessing Genealogical Relationships 786
Assessing Genetic Ancestry 787
0 .3 Comparisons between Great Apes Identify Genetic Health Risk Assessment 788
Human-Specific Traits 763 Late-Onset Alzheimer Disease 788
Revelations of Great Ape Genomes 763 Celiac Disease 789
Comparing the Human and Chimpanzee One Side of the Equation 789
Genomes 765
Problems 789

Ref erences and Additional Reading R-1


0 .4 Ancient DNA Reveals the Recent History of
Our Species 766 Ap pendix: A nswers A-1
Neandertals 768 Glossary G-1
Denisovans 769
Cred its C-1
Finding Genes that Make Us
Human 770 Index 1-1
About the Authors

Mark F. Sanders has been a faculty John L. Bowman is a professor


member in the Department of Molecular in the School of Biological Sciences at
and Cellular Biology at the University Monash University in Melbourne, Aus-
of California, Davis, since 1985. In that tralia, and an adjunct professor in the
time, he has taught more than 150 genet- Department of Plant Biology at the Uni-
ics courses to nearly 35,000 undergradu- versity of California, Davis, in the United
ate students. Although he specializes in States. He received a B.S. in Biochem-
teaching the genetics course for which this book is written, istry at the University of Ill inois at Urbana-Champaign in
his genetics teaching experience also includes a genetics 1986 and a Ph.D. in Biology from the Californ ia Institute
laboratory course, an advanced human genetics course for of Technology in Pasadena, California. His Ph. D. research
biology majors, and a human heredity course for nonsc ience focused on how the identities of floral organs are specified
majors, as well as introductory biology and courses in popu- in Arabidopsis (described in Chapter 18), and he conducted
lation genetics and evolution. He has also served as an advi- postdoctoral research at Monash University on the regulation
sor to undergraduate students and in undergraduate education of floral development. From 1996 to 2006, his laboratory
administration, and he has directed several undergraduate at UC Davis investigated developmental genetics of plants,
education programs. focusing on how leaves are patterned. From 2006 to 2011 ,
Dr. Sanders received his B.A. degree in Anthropology he was a Federation Fellow at Monash University, where his
from San Francisco State University, his M.A. and Ph.D. laboratory is studying land plant evolution using a develop-
degrees in Biological Anthropology from the University of mental genetics approach. He was elected a Fellow of the
California, Los Angeles, and 4 years of training as a postdoc- Austral ian Academy of Science in 2014 . At UC Davis he
toral researcher studying inherited susceptibility to human taught genetics, "from Mendel to cancer," to undergradu-
breast and ovarian cancer at the University of Californ ia, ate students, and he continues to teach genetics courses at
Berkeley. Monash University.

Dedication
To my extraordinary wife and partner Ita. She is a treasure For my parents, Lois and Noel, who taught me to love and
whose support, patience, and encouragement throughout revere nature, and Tizita, my partner in our personal genet-
this ongoing project make me very fortunate. To my won- ics experiments. And to all my genetics students who have
derful children Jana and Nick, to their spouses John and inspired me over the years, I hope that the inspiration was
Molly, to my grandson Lincoln, and to all my students, mutual.
from whom I have learned as much as I have taught.
John L. Bow111an
Mark F. Sanders

We dedicate this third edition of Genetic Analysis: An Integrated Approach to our friend and
colleague Mel Green, who passed away in October 2017 at the age of IO I. Mel was a stellar
geneticist and was engaged in genetics unti l the end. Over his long career, he made numerous
important contributions to genetics, inspiring scores of geneticists including the authors of this
textbook.

xv
Preface

We are now almost t,vo decades into the second century of basic sets of observations. In this edition, we adhere to and
modern genetics, and the expansion of knowledge in this rap- strengthen the integration that has resonated strongly with
idly progressing field continues at a dizzying pace. Topics instructors and students.
that seemed impenetrable just a few years ago are coming
into focus. Novel approaches to old problems are providing
profound insights into the genomics, development, and evolu- New to This Edition
tion of organisms in all three domains of life. CRISPR-Cas9,
As was the case in our previous ed itions, our aim above all
which was discovered in basic research on bacterial immu-
is to assist the student by making the learning of genetics
nity, has been developed into a genome-editing system that
easier, more interesting, and more effective. Thus, three
has revolutionized the manipulation of genomic sequences
spec ific goals have driven this rev ision, and each is sup-
in living cells. Advancements in genom ics, proteomics,
ported by new features that help accomplish it. Goal I is to
transcriptomics, and other enterprises of the "omic" world
provide more interesting, real-world applications of genet-
have opened avenues for research that were unimaginable in
ics. We have addressed this goal by writing five "Applica-
years past. And the resulting advancements in knowledge are
tion Chapters" that each high light a particular applied topic
quickly being turned into new applications. These are great
in human genetics. Goal 2 is to make the j ob of learning
times to be a geneticist or a student sn1dying genetics!
the details of genetics easier. We have addressed this goal
In keeping with these exci ting times of revolution-
by wri ting "Caption Queries" to accompany chapter figures
ary change in our field, our textbooks too must undergo
and by prov iding a new feature, titled "Preparing for Prob-
change. This third edition of Genetic Analysis: An Integrated
lem Solving," at the end of each chapter. Goal 3 is to fac ili-
Approach contains some significant changes that have been
tate group work and discussion of genetics problems and
made with students foremost in our minds. As authors and
concepts among classmates. We have addressed this goal
instructors of genetics, we have had front row seats in the
in part through the Caption Queries and in part by provid-
discipline and in the classroom. Between the t,vo of us, we
ing a new category of chapter problems, called "Collabora-
have more than SO years' experience and experimentation in
tion and Discussion," that are specifically designed to be
teaching genetics. We have used that experience to produce
tackled in groups. Along wi th these important pedagogical
this new edition. We hope that it conveys the excitement we
changes, th is rev ision is also important for incorporating
feel about genetics and the dynamism at work in the field,
new genetic information that is defi ning the future of the
and that it offers students new and interesting examples of
field. The following descriptions high light key new features
and insights into our favorite scientific discipline. As teach-
and information designed to accompl ish our revision goals.
ers and student mentors, our highest goal is to see students
succeed. To accomplish this we seek to motivate students to
pursue and explore genetics more fully and to incorporate Application Chapters
what they learn into their thinking and plans for their future.
Many students come to genetics curious abou t hu man
We hope teachers and students alike wi ll find motivation and
heredity and about how genetic principles are applied in
encouragement in the subject matter and examples in th is
real-world activities. This edition, like the previous ones,
book.
features numerous hu man examples to help illustrate the
operation of genetic principles, and it features five new
Application Chapters-short chapters focused on specific
Our Integrated Approach applied topics in hu man genetics and evolutionary genet-
This third edition, like its predecessors, carries the unique ics. The Application Chapters are written to give students
subtitle An Integrated Approach. The phrase embodies our informat ion on top ics of particular inte rest and to illus-
pedagogical approach, consisting of three principles: ( 1) to trate some of the practical uses of genet ics and genetic
integrate problem solving throughout the text-not relegat- analysis. Each of these special c hapters is about half the
ing it to the ends of chapters-and consistently to model a length of a typical textbook chapter, and each has a spe-
powerful, three-step problem-solving approach (Evaluate, cific applied focus. They are spaced periodically through-
Deduce, and Solve) in every worked example; (2) to integrate out the book in such a way that each of them comes just
an evolutionary perspective throughout the book; and (3) to after the key prerequisite materia l has been presented .
integrate descriptions of Mendelian genetics wi th molecu- Importantly, these new Application Chapters do not add
lar genetics and genomics so as to demonstrate the value of to the length of the book. We have made reorganization
each of these different approaches for investigating the same and revision dec is ions that have maintained the depth of
XV I
PREFACE X VII

coverage while allowing for the addition of the Appl ica- does one help students examine a figure attentively enough
tion Chapters in a space-neutral way. to derive the critical content and meaning? One way is by
Every Application Chapter opens with a story that asking questions about the figure. ln this revision, we have
exemplifies why the topic of the chapter is important, and written Caption Queries for virtually every figure in the book
each contains several end-of-chapter problems to guide to help students dissect the illustrated content and more fully
s tudent learn ing and d iscuss ion. The five Application understand its meaning and importance. Several Caption
Chapters are: Queries have been printed below their corresponding figure
in the chapter itself, and all Caption Queries are available as
I Application Chapter A - Human Hereditary Disease
clicker questions for c lassroom use and in Mastering Genet-
and Genetic Cou nseling This chapter describes the
ics as assignable homework. Some Caption Queries require
role of genetic counselors and the genetic information
the student to solve a problem using information from the
and analysis they employ in medical decision-making.
figure, some require an explanation be provided, and oth-
Students interested in human hereditary transmission, as
ers ask sn1dents to expand on the information or idea in the
well as those potentially interested in careers in medical
figure. All Caption Queries, whatever their form, wi ll help
genetics or genetic counseling, wi ll find satisfying dis-
students focus on the figures and derive a better understand-
cussions of these topics in this chapter.
ing of their content.
I Application Chapter B - Human Genetic Screenin g Caption Queries serve a second purpose as well. Genet-
Numerous invasive and non-invasive methods of screening ics instructors are becom ing increasingly interested in the
for inherited conditions are described in this chapter, and pedagogical approach known as "flipping the classroom."
their results are discussed. Topics include carrier screen- This approach has students do their textbook read ing and
ing; pre-natal, newborn, and pre-symptomatic genetic test- review of lecture, PowerPoint®, and other course materials
ing; and amniocentesis and chorionic villus sampling. outside of class, leaving class time open for discussion, prob-
lem solving, and inquiry-based learning. ln our own c lass-
I Application Chapter C - The Gen etics of Cancer
rooms, we have found that asking questions about chapter
This chapter discusses cancer from c,vo perspectives.
figures is an effective way to stimulate discussion and jump-
The first is an overview of the major hallmarks of
start problem solving and inquiry-based learning. The clicker
cancer that have been articulated over the last decade
versions of Caption Queries can be the first line of interactive
or so. The second is a discussion of cancers that have
questions in this approach.
a simpler genetic basis and cancers for which inherited
susceptibility has been identified. New, immune system-
based approaches to cancer treatment are also discussed. Preparing for Problem Solving
I Application Chapter D - Human Evolutionary Building on the strong problem-solving gu idance of our
Genetics This chapter presents the current interpreta- Genetic Analysis worked examples (the three-step problem-
tion of human evolution from a genomic perspective and solving approach described momentarily), we have added a
describes the relationship of modem humans to their new chapter feature ti tled Preparing for Problem Solving,
archaic predecessors. The discussion includes up-Io- located bet,veen the Chapter Summary and the end-of-chap-
date information on Neandertal and Denisovan genome ter problems. This feature is a list identifying the specific
sequencing, along with recent evidence on interbreeding knowledge and skills required to answer chapter problems.
among archaic human populations. The listed items draw students ' attention back to the maj or
ideas described in the chapter and to the practical skills that
I Applica tion Chapter E - Forensic Genetics This
were modeled there, before the students begin working on
chapter focuses on the uses and analysis of DNA in the
end-of-chapter problems.
contexts of crime scene analysis, paternity testing, and
direct-to-consumer genealogy, genetic ancestry test-
ing, and genetic health risk assessment. Examples of Collaboration and Discussion Problems
genetic analysis using the Combined DNA Index Sys-
tem (CODIS) and of genetic analysis to determine the Having students work in groups to solve problems is an
increasingly popular and productive way to encourage par-
paternity index and combined paternity index are given.
ticipation in, and to enhance, active learning. In this revi-
Descriptions of the direct-to-consumer genetic analyses
sion, each end-of-chapter problem set has been expanded to
provided by Ancestry DNA and 23andMe are part of the
include several new problems in a section titled Collabora-
chapter as well.
tion and Discussion. As the name implies, these problems
are designed to be evaluated and solved by smal l groups of
Caption Queries
students working together. Whether assigned as homework or
Textbook figures are an integral part of the pedagogical as part of flipped classroom activities, these exercises offer
apparatus of a textbook, but they are only effective if the an array of opportunities for comprehensive and hands-on
reader takes the time to look at and understand them. How problem solving.
XVIII PRE FAC E

Redesigned Chapter Content Ge netic Analysis teaches how to start thinking about a
problem, what the end goal is, and what kind of analysis is
The content and coverage of all chapters has been reworked required to get there. The three steps of this problem-solving
in this revision to keep up with changes in the field and framework are Evaluate, Deduce, and Solve.
keep all discussions timely. Several chapter revisions reflect
changes in approaches to genetic analysis. In Chapter S Evaluate: Students learn to identify the topic of the
("Genetic Linkage and Mapping in Eukaryotes"), for exam- problem, specify the nature or format of the requested
ple, the discussion of mapping of molecular genetic markers answer, and identify critical information given in the
has been substantially expanded. To make way for this expan- problem.
s ion, discussion of tetrad analysis in yeast has been dropped.
Ded uce: Students learn how to use conceptual knowl-
Chapter 13 ("Regu lation of Gene Express ion in Eukary- edge to analyze data, make connections, and infer addi-
otes") has undergone revision to feature more discussion
tional information or next steps.
of epigenetic regulation and the roles of epigenetic readers,
writers, and erasers. Chapters 14 ("Analysis of Gene Func- Solve: Students learn how to accurately apply ana-
tion by Forward Genetics and Reverse Genetics") and IS lytical tools and to execute their plan to solve a given
("Recombinant DNA Technology and Its Application") have problem.
a greatly expanded descriptions of the CRISPR-Cas9 system Irrespec tive of the type of prob lem presen ted to them,
and its applications in gene editing and gene drive systems.
thi s framework gu ides students through the stages of solv-
Chapter 16 ("Genomics: Genetics from a Whole-Genome
ing it and gives them the confidence to undertake new
Perspective") has undergone substantial revision to feature
problems.
new genomic approaches.
Each Genetic Analysis worked example is laid out in a
Several chapters include important new information
two-column format to help students easi ly follow the steps
that became avai lable just as writing was being completed.
of the Solution Strategy that are enumerated in the left-hand
Among numerous examples are the discussion in Chapter column and executed in the right-hand column. " Break It
7 ("DNA Structure and Replication") of the apparently sto-
Down" comments point to key elements in the problem state-
chastic pattern of DNA replication initiation in E. coli that ment of each example, as an aid to students, who often strug-
was described in mid-2017; and the description in Appli-
gle to identify the concepts and information that are critical
cation Chapter C (Genetics of Cancer) of the CAR-T cell
to starting the problem-solv ing process. We also include
method for treating certain cancers that was recommended problem-solving Tips to help with critical steps, as well as
for approval by a panel of the U.S. Food and Drug Adminis-
warni ngs of common Pitfal ls to avoid; these suggestions and
tration in mid-2017.
admonitions are gathered from our teachi ng experience. It is
A chapter from the first t,vo editions, "The Integration
also important to note that the Genetic Analysis examples are
of Genetic Approaches: Understanding Sickle Cell Disease,"
integrated into the chapters, right after discussions of impor-
has been removed in this edition to help make room for the
tant content, to he lp students immediately apply the concepts
inclusion of the Application Chapters. We know many profes-
they are learning. Each chapter includes t,vo or three Genetic
sors are fond of this chapter, and they can access it in Master-
Analysis problems, and the book contains nearly SO in all.
ing Genetics or in custom versions of this text.
Complementing the Genetic Analysis problems are
strong end-of-chapter problems that are d ivided into three
groups. Chapter Concept problems come first and review the
Maintaining What Works critical information, principles, and analytical tools discussed
While making numerous pedagogical and content changes in the chapter. These are followed by Application and Inte-
in this third edition of Genetic Analysis: An Integrated gration proble ms that are more challenging and broader in
Approach, we have maintained all of the fean1res that made scope. Last come the chapter's Collaboration and Discussion
previous editions of the book so popular and effective. These questions, a new addition described above. All solutions to
include the systematic problem-solving approach, the per- the end-of-chapter problems in the Study Guide and Solutions
vas ive evolutionary perspective, and the consiste nt cross Manual use the evaluate-<leduce-solve model to reinforce
connections drawn throughout between transmission and the book's problem-solving approach.
molecular genetics.
An Evolutionary Perspective
A Problem-Solving Approach Geneticists are acutely aware of evolutionary relation-
To help train students to become more effective problem ships between genes, genomes, and organ isms. Evolution-
solvers, we employ a unique problem-solving feature called ary processes at the organ ismal level, discovered through
Ge netic Analysis that gives students a consistent, repeatable comparative biology, can shed light on the function of
method to help them learn and practice problem solving. genes and organization of genomes at the molecular level.
PREFAC E XIX

Likewise, the function of genes and organizat ion of 2. Molecular-First Approach


genomes informs the evolutionary model. The integration
of evolution and of the evolutionary perspective remai ns Ch 1 -+ Ch 7- 9-+ Ch 2- 6-+ Ch 10- 20
a central organizing theme of this th ird edition, greatly This pathway provides a molecular-first approach, to
strengthened through enhanced coverage of molecu- develop a clear understanding of the molecular basis of
lar genetic evolut ion. For examp le, Chapter 20 includes heredity and variation before delving into the analysis of
updated discussion of the molecular genetic evolution of hereditary transmission.
Darwin 's finches, and Appl ication Chapter D includes
extensive d iscussion of the role of interbreeding between 3. Quantitative Genetics Focus
Neandertals and archaic humans in forming the modern
Ch 1, 2, 4-+ Ch 19 -+ Ch 3, 4- 18 -+ Ch 20
human genome.
This pathway incorporates quantitative genetics early in the
course by introducing polygenic inheritance (Chapter 4)
Connecting Transmission and followi ng it up with a comprehensive discussion of
and Molecular Genetics quantitative genetics (Chapter 19).
Experi ments that shed light on principles of transmission
genetics preceded by several decades the discovery of the 4. Population Genetics Focus
struc ture and function of DNA and its role in inherited Ch 1- 2-+ Ch 20-+ Ch 3- 19
molecular variation. Yet biologists already recognized that This pathway incorporates population genetics early in the
DNA variation is the basis of inherited morphological varia- course. Instructors can use the introduction to evolution-
tion observed in transmission genetics. Understanding how ary principles and processes (Chapter I) and the role of
these two approaches to genetics are connected is vital to genes and alleles in transmission (Chapter 2) and then ad-
thinking like a geneticist. We have retained the integration of dress evolution at the population level and at higher levels
transmission genetics and molecular genetics in the text and (Chapter 20).
have enhanced this feature in two ways: first, through addi-
tional discussion of the molecular basis of hereditary varia-
tion, including the mutations that underlie the four identified
genes examined by Mendel, and second, with a much more
Chapter Features
robust genomic approach. A principal goal of our writing sty le, chapter format, and
design and illustration program is to engage the reader intel-
lectually and to invite continuous reading, all the wh ile
explaining complex and difficult ideas with maximum clar-
Pathways through the Book ity. O ur conversational tone encourages student reading and
This book is written with a Mendel-first approach that many comprehension, and our attractive design and realistic art
instructors find to be the most effective pedagogical approach program visually engage students and put them at ease. Expe-
for teaching genetics. We are cognizant, however, that the rienced instructors of genetics know that students are more
scope of information covered in genetics courses varies and engaged when they can relate concepts to the real world. To
that instructor preferences differ. We have kept such differ- that end, we use real experimental data to illustrate genetic
ences and alternative approaches in mind while writing the principles and analyses as well as to familiarize students with
book. Thus, we provide four pathways through the book that exciting research and creative researchers in the field. We
instructors can use to meet their varying course goals and also discuss a broad array of organisms-such as humans,
objectives. Each pathway features integration of problem bacteria, yeast, plants, fruit f lies, nematodes, vertebrates, and
solving through the inclusion of Genetic Analysis worked viruses-to exemplify genetic principles.
examples in each chapter. Careful thought has been given to our chapter features;
each of them serves to improve sn,dent learning. The follow-
ing list illustrates how we highlight central ideas, problems,
1. Mendel-First Approach
and methods that are important for understanding genetics.
C h 1- 20
I Essential I deas : Each chapter begins with a short list of
This pathway provides a traditional approach that begins
concepts that embody the principal ideas of the chapter.
with Mendelian genetics but integrates that material with
evolutionary concepts and connects it solidly to molecular I G enetic Analysis : Our key problem-solving feature that
genetics. This approach is exemplified by the discussion in guides students through the problem-solving process by
Chapter 2 of genes responsible for four of Mendel's traits, using the evaluate-deduce-solve framework.
followed in Chapters 10 and 11 by a description of the mo- I Foundation Figures: Highly detailed illustrations of
lecular basis of mutations of those genes. pivotal concepts in genetics.
xx PREFACE

I Caption Quer ies: Questions that help sn1dents dissect extends your options for assigning chal lenging prob-
the illustrated content of book figures and more fully lems. Each problem includes specific wrong-answer
understand their meaning and importance. feedback to help students learn from their mistakes and
I Experimenta l Insights: Discussions of critical or illus- to guide them toward the correct answer.
trative experiments, including the observed results of I Inclusion of nearly 90o/o of the end-of-chapter questions
the experiments and the conclusions drawn from their among the assignment possibilities in the item library.
analysis. The broad range of answer types the questions require,
I Research Techniqu es: Explorations of impor- in addition to multiple choice, includes sorting, labeling,
tant research methods, illustrating the results and numerical, and ranking.
interpretations. I Leaming Catalytics is a "bring your own device" (smart-
I Case Studies: Short, real-world examples, at the end of phone, tablet, or laptop) assessment and active class-
every chapter, that highlight central ideas or concepts of room system that expands the possibilities for student
the chapter whi le reminding students of some practical engagement. Instructors can create their own questions,
applications of genetics. draw from community content shared by colleagues,
or access Pearson's library of question clusters that
I Prep ar ing for Pr ob lem Solving: Immediately preced-
explore challenging topics through c,vo- to five-question
ing the end-of-chapter problems, this list of approaches
series that focus on a single scenario or data set, build
and suggestions briefly highlights the tools and con-
in difficulty, and require higher-level thinking.
cepts students will use most often in answering chapter
problems.

Mastering Genetics Student Supplements


http://w,v,v.masteringgenetics.com Mastering Genetics
A key reviewing and testing tool offered with this textbook is http://www.masteri nggenetics.com
Mastering Genetics, the most powerful online homework and
Used by over one million sc ience students, the Mastering
assessment system avai lable. 1\norials follow the Socratic
platform is the most effective and widely employed onli ne
method, coaching students to the correct answer by provid-
tutorial, homework, and assessment system for the sciences;
ing feedback specific to a student's misconceptions as well
it helps students perform better on homework and exams. As
as proffering hints students can access if they get stuck. The
interactive approach of the tutorials provides a unique way an instructor-assigned homework system, Mastering Genetics
is designed to provide students with a variety of assessment
for students to learn genetics concepts while developing and
tools to help them understand key topics and concepts and
honing their problem-solving ski lls. In addition to ttllorials,
Mastering Genetics includes animations, qu izzes, and end- to build problem-solvi ng ski lls. Mastering Genetics tutorials
guide students through the toughest topics in genetics with
of-chapter problems from the textbook. This exclusive prod-
self-paced tutorials that prov ide individualized coaching
uct of Pearson greatly enhances the learning of genetics. Its
offering hints and feedback specific to a student's individual
features include:
misconceptions. Students can also explore the Masteri ng
I New tutorials on topics like CRISPR-Cas, to help stu- Genetics Study Area, which includes animations, chapter
dents master important and challenging concepts. quizzes, the eText, and other study aids. The interactive eText
I New Dy namic Study Modules. These interactive flash- 2.0 allows students to highlight text, add study notes, and
cards present multiple sets of questions and provide watch embedded videos.
extensive feedback so students can test, learn , and retest
until they achieve mastery of the textbook material. Study Guide and Solutions Manual
Whether assigned for credit or used for self-study, they ISBN: 0 134832256 / 9780 l 34832258
are powerful pre-class activities that help prepare stu-
Heavily updated and accuracy-checked by Peter M irabito
dents for more involved content coverage or problem
from the University of Kentucky, the Study Guide and Solu-
solving in class.
tions Manual is divided into four sections: Genetics Problem-
I eText 2.0, a dynamic digital version of the textbook, Solving Toolki t, Types of Genetics Problems, Solutions to
adapts to the size of the screen being used, includes End-of-Chapter Problems, and Test Yourself. In the "toolkit"
embedded videos and hotlinked glossary, and allows stu- section, students are reminded of key terms and concepts and
dent and instructor note-taking, highlighti ng, bookmark- key relationships they need to know to solve the problems in
ing, and searches. each chapter. This material is followed, in the second sec-
I Practice Problems, simi lar to end-of-chapter questions tion of the manual, by a breakdown of the types of problems
in scope and level of difficulty, are found only in Mas- students will encounter in the end-of-chapter problems, the
tering Genetics. Solutions are not avai lable in the Study key strategies for solving each problem type, variations on
Guide and Solutions Manual, and the bank of questions the problem type that may also be encountered, and a worked
PREFAC E XXI

example modeled after the Genetic Analysis feature of the I PowerPoint® presentations containing clicker-based
main textbook. The solutions provided in the third section of Caption Query questions for all figures in the text.
the manual also reflect the evaluate-deduce-solve strategy I In Word and PDF files, a complete set of the assessment
of the Genetic Analysis feature. Finally, for more practice, materials and study questions and answers from the test
we've included five to ten Test Yourself problems and accom- bank. Files are also available in TestGen format.
panying solutions for each chapter in the textbook.

We Welcome Your Comments


Instructor Supplements
and Suggestions
Mastering Genetics
Genetics is continuously changing, and textbooks must also
Mastering Genetics engages and motivates students to learn change continuously to keep pace with the field and to meet
and al lows you to easily assign automatically graded activi- the needs of instructors and students. Communication with
ties. Tutorials provide students with personalized coaching our talented and dedicated users is a critical driver of change.
and feedback. Using the gradebook, you can quickly monitor We welcome all suggestions and comments and invi te
and display student results. Mastering Genetics easily cap- you to contact us directly. Please send comments or ques-
tures data to demonstrate assessment outcomes. Resources tions about the book to us at mfsa n ders@u cdavis.edu or
include: j ohn.bo,vman @mon ash.ed u.
I In-depth tutorials that coach students with hints and
feedback specific to their misconceptions.
Acknowledgments
I An item library of thousands of assignable questions,
including reading quizzes and end-of-chapter problems. In our first edition, we described the adage that begins
You can use publisher-created prebuilt assignments to with the words "It takes a village ... " as aptly applying
get started quickly. Each question can be easily edited to to the development and assembly of our textbook. This
precisely match the language you use. new edi tion too has been a true team effort, and we are
grateful to all of our teammates. We particularly wish to
I A gradebook that provides you with quick results and
thank our editorial team led by our senior editor Michael
easy-to-interpret insights into student performance.
Gillespie, our developmental editor Moira Lerner Nelson,
and our content producer Melanie Field for their guidance
TestGen Test Bank and assistance in bringing this new edi tion to life. Margot
ISBN: 0134872762 /9780134872766 Otway and Barbara Price also brought their developmental
Test questions are available as part of the TestGen EQ ed iting expertise to improving the art and page layouts. Our
Testing Soft,vare, a text-specific testing program that is net- thanks to proofreader Pete Shanks for his keen attention to
workable for administering tests. It also allows instructors detail. We also thank our compatriot Peter Mirabito, author
to view and edit questions, export the questions as tests, and of the Study Guide and Solutions Manual, for his work as-
pri nt them out in a variety of formats. sembling an exceptionally useful supplement. Beth Wilbur,
Adam Jaworski, and Ginnie Simione Jutson have also been
Instructor Resources essential supporters who have made this new edition a
reality.
A robust suite of instructor resources offers adopters of the On the production side, we thank the fine artists at
text a comprehensive and innovative selection of lecture pre- Lachina who have managed to tum our rudimentary cartoons
sentation and teaching tools. Developed to meet the needs of into instructive pieces of art. We thank the production team
veteran and newer instructors alike, these resources include: at SPi Global led by Thomas Russell.
I The J PEG files of al l tables and line drawings from the The Pearson Education marketing team led by Kell y
text. Drawings have labels individual ly enhanced for Galli and Christa Pelaez have provided expert guidance in
optimal projection results and also are provided in unla- bringing our textbook to the attention of genetics instructors
beled versions. throughout North America and indeed around the world.
Finally, and perhaps most importantly, we thank the
I Most of the text photos, including al l photos with peda-
scores of gifted genetics instructors and the thousands of
gogical significance, as JPEG files.
genetics students who used the prev ious editions of our
I A set of PowerPoint® presentations consisting of a thor- book and the many reviewers and accuracy checkers whose
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xx11 PREFAC E

Nevada, Reno; Christopher Halweg at North Caroli na State Supplements and Media Contributors
University; and Nancy Staub at Gonzaga University for their
Laura Hill Benninghrun , University of\lennonr
more than generous expert advice.
Pat Calie , Eastern Kentucky University
Christy Fillman, University of Colorado-Boulder
Reviewers Kathleen Fitzpatrick, Simo11 Fraser University
Jade Atallah, University of Toronto Michelle Gaudette, Tufts University
Michelle Boissiere, Xa vier University of Louisiana Christopher Halweg, Norrh Carolina Srate University
Sarah C havez, \Vashington University Jutta Heller, Loyola University
Claire Cronmiller, University of Virginia Steven Karpowicz, University of Cenrral Oklahoma
Robert Dot~on, Tulane University David Kass, Eastern 114ichigan University
Steven Finkel, University of Sowhern California Fordyce Lux l!I, ,14etropolitan State College
Benjrunin Harrison, University ofAlaska Anchon1ge Peter Mirabito, University of Ken111cky
Laura Hill, University ofVennonr Pam Osenkowski, Loyola University
Adrun Hrincevich, Louisiana Srare University Jennifer Osterhage, University of Kenrucky
Steven Karpowicz, University of Cenrral Oklahoma Louise Paquin, McDaniel College
Kirkwood Land, University ofrhe Pacific Fiona Rawle , University of Toronto 114ississauga
C raig Mi ller, Universiry of California ar Berkeley Pamela Sru1dstro m, University of Nevada, Reno
Jessica Muhlin, ,14aine ,14aritime Academy Tara Stoulig , Southeasrern Louisiana State
Anna Newman, University of Houston Kevin Thornton, University of California at Irvine
Joru1ne Odden, Pacific University Oregon Douglas Thrower, University of California, Sama Barbara
Matthew Skerritt, Corning Community College Sarah Van Vickie-C havez, \Vashingron University in Sr. Louis
Nancy Staub, Gonzaga University Dennis Venema, Tri11ity Wesrern University
David Waddell, University of Nonh Florida Andrew J. \Vood, Sowhern Illinois University
Cynthia Wagner, University of Maryland Baltimore County
Rahul Warrior, University of Califon,ia at Irvine .
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Götrik Fincke nousi ylös lähteäksensä Filippuksen puheille.

— Ennen mentyänne, herra Götrik, tyhjentäkäämme ensimäinen


maljamme, sanoi Olavi, viitaten Gretchenille, joka heti toi esille
hopeatarjottimen, johon ennakolta oli ladottu kalliita, viinillä täytettyjä
maljoja.

Gretchen asetti tarjottimen pöydälle, pani toisen suuremmista


maljoista
Fincken, toisen Olavin eteen ja tarjosi kolmannen, pienimmän pikarin
Ebballe, peräytyen sitten kunnioittaen taemmaksi.

He joivat kaikki pohjaan, ja Fincke poistui, luvaten pian palata.


Olavi käski Gretchenin ja palvelijain odottaa kyökissä ruokineen,
kunnes hän toisin määräisi.

Tuskin olivat Olavi ja Ebba jääneet kahden kesken, kun Ebba


yht'äkkiä huutaa parkaisi. Olavi oli käynyt kuoleman kalpeaksi, silmät
oli tunkea kuopistaan ja kasvot vääristyivät kivusta. Ebban
huutaessa tuli Gretchen sisään.

— Hän kuolee! huusi Ebba, kauhistuneena rientäen huoneesta


ulos.

— Auttakaa! Minä palan! ähkyi Olavi. Ken on tehnyt mulle tämän?

Gretchen astui lähemmälle.

— Sen olen minä tehnyt, sanoi hän pannen kätensä ristiin


rinnoille.

— Olavi katsoi häneen terävästi, läpi-lävistävin silmin.


— Sinä? suhisi hän.

— Niin, vastasi Gretchen, minä juuri. Näin sinun kaatavan jotakin


mustaa nestettä Ebba neitsyen maljaan. Tiesin kyllä ett’et sitä tehnyt
mitään hyvää tarkoittaen, ja niinpä vaihdoin viinin.

— Miksikä, miksikä teit tämän? kuiskasi Olavi, väännellessään


sinne tänne ja kylmän hien pihkuessa hänen otsastaan.

— Miksikö? Siksi että olen nähnyt, miten sinä olet ollut täynnäsi
pahuutta kuin myrkyllinen, käärme. Sinä et edes voinut pitää kavalia
hankkeitasi salassa; sinulla piti oleman joku, jolle aiheesi ilmoittaisit,
voidaksesi jo edeltäkäsin riemuita pahuuttasi. Arvaappas mitä minä
tunsin puhuessasi, miten etsit sopivaa tilaisuutta saattaaksesi Niilo
Iivarinpoikaa hengiltä. Hän, jota minä rakastin ja jonka puolesta
mielelläni olisin mennyt kuolemaan. Minä varoitin häntä, mutta hän ei
ymmärtänyt varoitustani, vaan on nyt kuolleena.

Hän kallisti alakuloisesti päätänsä, mutta nosti sen heti jälleen


pystyyn.

— Ja mitä annoitkaan kerran minulle juoda? Minua hirvittää vielä


sitä ajatellessani. Ooh, tunnen sen asian varsin hyvin. Olen
Saksassa monta kertaa kuullut, miten velhot moisella juomalla
kulkevat Kyöpelin-vuorelle. Minkä tähden teit minulle sen? Tahdoitko
myydä minut saatanalle ja, varastaa minulta ijankaikkista autuuttani?
Mutta minä olen itkenyt ja rukoillut, ja perkele on minusta jälleen
lähtenyt, vaikka jo olin hänen kourissansa ja kauvan kannoin hänen
merkkiänsä punaisena pilkkuna olkapäällään Ja mitä ai'oit tehdä
nyt? Niilo Iivarinpojan morsiamen, jalon Fincke herran kauniin
tyttären tahdoit minun sijastani myydä paholaiselle, ostaaksesi
tämän tytön viattomalla sielulla hänen apunsa. Ja tämänkö sallisin
tapahtua? Hänetkö antaisin sinun, ilkeiden tarkoitustesi
täyttämiseksi, uhrata ikuisen kadotuksen tuskille, niinkuin minutkin
tahdoit uhrata? Minä vaihdoin viinin, itse olet juonut suuhusi noita-
juoman.

Tyttösen näin puhuessa kiivaalla ja suuttuneella äänellä, oli Olavi


vain tuijottanut häneen, ja vaahtoa kokoutui hänen huulilleen.
Horkansetki sai hänestä kiinni, jalat vääntyivät väärään, sormet
tarttuivat jäykkinä pöytäliinankulmaan. Mies vaivainen putosi kovan
suonenvedon vallassa lattiaan, vetäen perästänsä pöytäliinat, astiat
ja viinimaljat.

Nyt törmäsivät, melusta peljästyneinä, palvelijat sisään. He kokivat


nostaa Olavia pystyyn. Hän avasi silmänsä ja tuijotti tylsästi
ympärilleen, kunnes hänen katseensa kohtasi Gretchenin, joka
kalpeana ja peloissaan nojausi viereisen tuolin selkälautaa vasten.

— Sinä — sinä — olet minut murhannut, huusi hän, törmäsi ylös ja


tarttui häntä rintaan.

Röijyn sametti halkesi, ja hämmästyen näkivät palvelijat että


Olavin kamaripoika oli nainen.

— Noita-akka — — juotti — mulle — myrkkyä! äkkäsi Olavi.

Hän vaipui lattialle, taasen kovan suonenvedon väristyksissä.

Filippus Kern, jota oli lähetetty noutamaan ja joka oli rientänyt


paikalle ynnä Fincken kanssa, otti pienestä vaskirasiasta, jota hän
aina kantoi taskussaan, kolme rippileipää, joissa oli kolme ristin
muotoista merkkiä kussakin, vasta-syntyneiden karitsain verellä
siihen piirrettyjä.
Hän koki saada ne sisään Olavin kovasti yhteen-purtujen
hampaiden välistä.

— Jos hän nielaisee ne, on hän pelastettu! mumisi Filippus.

— Sitokaa tuo tuossa! huusi hän sitten, osoittaen Gretcheniä. Hän


on myrkyttänyt hänet. Hän on velho!

Palvelijat ymmärsivät yhdestä sanasta. Gretchenin peljästys asian


äkkinäisestä lopusta, kuolevan sanat ja etupäässä se seikka, että
hän oli nainen, todistivat häntä vastaan. Gretchen pantiin kiinni.
Seuraavana päivänä oli hän vietävä kaupungin vankilaan.

Samassa astui Niilo sisään, juuri kun Olavi taasen aukasi silmänsä
ja puoleksi kohosi jaloilleen.

— Kavaltaja, huusi hänelle Niilo. Niin, tuijota minuun, sinä


kelvoton.
Ilkeät vehkeesi eivät onnistuneet. Tunnen kaikki kemialliset
hankkeesi.
Kauvan olet välttänyt rangaistusta, mutta nyt saat, kun saatkin,
tekojesi palkan.

Ebba oli viereisestä huoneesta kuullut Niilon äänen ja riensi nyt


riemuiten hänen syliinsä. Liikutuksen vallassa painoi hänet Niilo
rinnalleen, hellästi suudellen noita onnesta loistavia kasvoja.

Olavi Sverkerinpoika koki vielä nousta. Hänen silmänsä kiiluivat


vihaa, ja hän nosteli nyrkkiänsä. Mutta väristen vaipui hän jälleen
maahan.

— Kirje… korisi hän, ja kasvoille lensi kuolemantuska.


Taasen tuli hänelle kova suonenveto. Tämän tauottua kävivät
hänen kasvonsa hetkeksi levollisemmaksi. Hänen silmistään lensi
himmeä, rukoileva katse läsnä-olijoihin, hänen huulensa liikkuivat,
ikäänkuin olisi hän tahtonut jotakin sanoa, hänen rintansa aaltoili
raskaasti, mutta samassa hetkessä tuli häneen suonenveto
uudestaan, ja tuskissa väännellen heitti hän henkensä.

Peljästyneenä nojasi Ebba päätänsä Niilon hartiaa vasten,


ikääskuin olisi hän tahtonut karttaa tuota kauheaa näkyä.

Älä välitä kavaltavan konnan kuolemasta, sanoi Niilo. Petturi,


vakoja, joka kavalasti imarrellen luikertaa kansalaistensa
luottamukseen varastaaksensa heidän kunniansa — ehkäpä
pannaksensa isänmaan onnen kaupoille, hän ei ansaitse sääliä,
vaan halveksimista vain. Tule, mennään pois!

Myöhempään illalla oli Pekka Niilon ja oman hevosensa kanssa


linnakentällä, odottaen pimeässä jotakuta tulevaa. Eikä hänen
tarvinnut kauvan odottaa, ennenkun ihmishaamu näkyi tulevan,
juosten linnasta päin kentän poikki. Se oli Gretchen hovipoika-
vaatteissaan. Hetken päästä kuului kahden laukkaavan hevosen
kavioin kopse tömisevän pitkin kaupungin ahtaita katuja, mutta se ei
häirinnyt moiseen meluun tottuneita, kiinniruuvattujen
ikkunaluukkujensa takana nukkuvia kaupunkilaisia. Ratsastajat,
ajoivat ulos tulliportista, ja toinen heistä, tuttavamme Pekka, lausui
leikillisesti:

— Kun nyt tulen mustalaisten luo, niin annanpa akkojen povata


itselleni, pitääkö minun tänä vuonna mennä naimisiin vai olla
menemättä.
Kun oikeuden-palvelijat seuraavana päivänä tulivat noutamaan
tuota velhoomisesta ja noituudesta syytettyä tyttöä, oli hän, kun
olikin, tipo tiessään. Sen huoneen ikkuna, jossa häntä oli pidetty
suljettuna ja jossa Niilo vielä edellisenä iltana oli käynyt häntä
puhuttelemassa, oli auki — ja tämä seikka oli ainoana, jälkenä
hänen perästänsä, Oli huimaavan syvä sieltä ylhäältä maahan, ja
mahdotonta oli että mikään ihmis-olento olisi tuosta uskaltanut
hypätä alas. Kun räystäsränni, joka kävi ihan ikkunanpieltä myöten,
pari vuotta sitä ennen pystytettiin, oli muuan työmies luiskahtanut
keskikorkealta irti ja pudonnut kuoliaana maahan..

Gretchen oli ja pysyi poissa. Luultavasti oli hän — niin arveltiin —


lentänyt tiehensä Pelsepupin avulla. Eräs vahtimies väitti nähneensä
mustan jättiläislinnun kaltaisen haahmon yösydännä häilyvän seinää
vasten räystäsrännin kohdalla hänen ikkunansa alla. Mies oli niin
peljästynyt, ett'ei uskaltanut sille puolen linnaa ennen päivän tultua,
mutta silloin ei haahmoa enää näkynyt.
LOPPU.

Oli päästy elokuun loppupuoleen. Porkkolan kartano oli uudestaan


rakennettu ja välkkyi vastaveistettynä, komeana koivujen
vihannoivain välistä.

Lukuisa joukko ritareita ja ylhäisiä naisia loistavissa puvuissa oli


kokoontunut tuohon suureen, koristettuun saliin — Ebba Fincken ja
Niilo Iivarinpojan häitä viettämään.

Vihkimyksen toimitti kirkkoherra vanhus. Hän oli Ebballe antanut


kirkon kasteen, hän oli kasteen-liiton hänelle vahvistanut, ja kun hän
nyt näki neidon — sitten kun Herra oli kovilla kärsimyksillä koettanut
— onnellisena morsiamena posket punassa seisovan tuon hohtavan
silkkiteltan alla, jota kauniit kaasot ja uljaat ohjemiehet pitivät, silloin
vapisi hänen äänensä liikutuksesta, hänen alkaessaan:

— Ei yhdellekään ihmiselle ole suotu että läpikatsoa Herran,


kaikkivaltiaan sallimusta. Mutta niinkuin Daavid virrentekijä lausuu:
ahdistuksesta minut päästänyt olet, niin tulee meidän aina luottaa
Herran päälle, joka ei omaisiansa hylkää. Katsokaa kuinka kauniina
kesä nyt seisoo kukoistuksessansa ja tähkäpäät pellolla turpoovat.
Runsaalla kädellä suopi nyt kaikkein hyvien lahjojen antaja viljaa,
sitten kun hän vanhurskaudessansa kovasti ja kauvan on koetellut
meitä näljällä ja kalliilla ajalla. Kansa, joka oli miekkaan tarttunut, on
nyt palannut takaisin sirppiensä ja autojensa tykö. Rauha vallitsee
maassa, ja mitä viha on kaatanut, sen ahkeruus uudestaan
ylösrakentaman pitää, niinkuin tämä talo, jossa nyt olemme
kokoontulleet, jälleen on ylöskohonnut tuhkasta, suurempana ja
kauniimpana kuin entinen. Täällä tulee nyt uljas, jalo ja ylhäinen
vänrikki Niilo Iivarinpoika emäntänsä, siveän, jalon ja ylhäisen
neitsyen Ebba Fincken kanssa Herran pelvossa ja hänen
siunauksessansa viettämään elämänsä suven ja vanhuutensa
syksyn onnellisella kukoistuksella ja ihanalla hedelmällä, johon
alaskutsumme sen kaikkein korkeimman armon. Rukoilkaamme!

Kun vihkimys oli toimitettu messuineen ja virrenlauluineen, istuttiin


hää-aterialle, joka nautittiin ilon ja riemun vallitessa.

— Se oli ikävää, lausui Niilo, — kun palvelija oli tarttua häätorttu-


vatiin, tarjotakseen Ebballe — että reipas Pekkani, joka aina on
tehnyt tehtävänsä sodan ja vainon vallitessa, nyt ei ole saapuvilla
palvellakseen minua. Siitä kun hän Turussa sai joksikin aikaa loman,
ei häntä enää ole näkynyt. Mutta hänet oikealta kannalta
tunteakseni, ei hän ole hukkaan joutunut.

Samassa kuului rämisevän kärryt; -jotka seisahtivat portaiden


eteen, ja sisään hääsalihin astui Pekka tyytyväisyys naamassaan ja
puoleksi laahaten muassaan talonpojan-tyttöä, jonka vereksille
punaposkille hämi ja ujous ajoi lisää purppuraa.

— Pekka! huudahti Niilo.

— Niin, nuori herra, vastasi Pekka, pyyhkien pellavatukan


silmiltään.
Hän itse ja Kreeta, torpparin-ämmä myös, laillisesti vihityt
Pohjanmaalla kristilliseen avioliittoon. Sanottuhan on, ett'ei miehen
pidä yksinänsä oleman.

— Ai, ai, sanoi nauraen Niilo. Jos minun täytyy jättää Ebba rouva
ja lähteä sotaan, niin tulet sinä siivosti mukaan, ja miten käy silloin
torpan, kun Kreeta yksinään saa sitä hoitaa.

— Sen hän osaa oivallisesti, kehui ylpeänä Pekka. Hän pystyy itse
kyntämään, jos niin tarvitaan, sillä siihen ovat Pohjanmaan reippaat
tyttösiipat nyt saanet oppia, kun niin monta miestä on hukkunut
tuohon tyhmään sotaan. Mutta sotapa ei sentään ollutkaan niin
tyhmä. Tällä haavaa on Pohjanmaalla miesväen puute, enkä muuten
kai olisi saanutkaan Kreetaa muassani tänne.

Hän heitti tirkistävän, itserakkaan ja ihastuneen silmäyksen


Kreetaansa ja lisäsi sitten:

— Teitä en koskaan jätä, Niilo herra, en kotona enkä muualla. —


Annappa tänne, sanoi hän sitten palvelijalle, jonka tuli kantaa
häätorttua. Etkö näe että minä olen täällä! Anna mun kantaa.

Aterian loputtua tarttui Götrik Fincke suureen hopeamaljaan, pyysi


äänettömyyttä ja lausui:

— Vihollinen vei voimani päivinä käsivarteni, mutta hän ei voinut


viedä ruotsalaista sydäntäni. Ja tämä sydän sykkii vieläkin ylpeyttä,
ajatellessani niitä voittoja, joihin niin usein olen vienyt Suomen
poikiani. Se pahoitti minua kovasti, kun kansa äsken näkyi menneen
hajallensa ja käänsi aseensa omaa rintaa vastaan. Ja vieläkin minua
pahoittaa se eripuraisuus, joka vallitsee valtakunnassa. Se päivä on
tuleva, jolloin voimiamme tarvitaan valtakunnan vanhaa vihollista
vastaan. Vielä ei kukaan tunne hänen voimaansa, mutta tulkaan hän
vain! Vaikkapa hän hakkaisikin poikki kansan käden, niinkuin hän on
minun käteni katkaissut; — niin kauvan kuin meillä on toinen käsi ja
rehellinen, isänmaallinen sydämemme tallella, olemme, kun
olemmekin, vahvat. Tämä on minun sanani teille, te nuoret, nyt
juodessani teidän onneksenne tästä vanhasta maljasta, jonka kerran
itse otin pajarin teltasta.

Götrik Fincke tyhjensi rakkaan maljansa, jonka jälleen


passaripoika täytti reunoihin asti. Niilo Iivarinpoika tarttui siihen nyt.

— Teidän sananne on pysyvä meille kalliina, kunnioitettuna


muistona, isä, sanoi hän vakavasti. Lapsemme ja lapsenlapsemme
ovat ne painavat sydämiinsä. Niinkuin itse olen kasvanut isoksi ja
vahvaksi, vaikka olen maannut vihollisen miekan lyömänä kalman
omana melkein, niin kasvakoot hekin voimassa ja olkoot aina valmiit
asettamaan rintansa maan ja valtakunnan suojaksi. Sotilaana kyllä
tiedän että onni voi vaihtua. Mutta minä olen kokenut vanhan,
arvoisan kirkkoherramme sanojen totuuden ja huomannut että,
vaikka viimeinenkin toivo näkyy rauenneen, voi Jumala armossansa
kääntää kaikki paruiksemme. Tulkoon, jos niin on taivaan tahto,
vihollinen kymmenkertaisella voimalla. Me ja meidän jälkeisemme
emme pelkää, sillä Herra on auttava meitä, niinkuin tähän saakka,
hyvässä taistelussamme.

Hän tyhjensi vuorostaan maljan. Vakava mieli-ala vallitsi nyt


hetken aikaa seurassa. Jokaisella oli kansan taistelujen ja
kärsimysten muisto vireänä mielessä; he eivät unohtaneet tuota
kamppausta, joka vuosi satojen vierressä on ikääskuin pyhäksi
käynyt ja jossa tiedettiin kansan elämän taikka kuoleman kaupoilla
olleen.
Hääjuhlaa jatkettiin sitten ilon ja riemun vallitessa, ja
morsiustanssin huvi elähytti nuoret ja vanhat. Ylpeä oli ylkä ja
miellyttävä morsian. Mutta kauniinta oli nähdä, kun illan hämärä tuli,
soitsutanssi tanssittiin morsiusparin kunniaksi ja soitsujen valo heitti
haaveellisen kohteensa nuoren pariskunnan onneen ja iloiseen,
hälisevään hääjoukkoon.
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