SraRunTable (GSE52194)

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Run,Assay Type,AvgSpotLen,Bases,BioProject,BioSample,Bytes,Center

Name,Consent,DATASTORE filetype,DATASTORE provider,DATASTORE


region,Experiment,GEO_Accession
(exp),Instrument,LibraryLayout,LibrarySelection,LibrarySource,Organism,Platform,Rel
easeDate,create_date,version,Sample Name,source_name,SRA Study,tumor_type
SRR1027171,RNA-
Seq,120,5332166640,PRJNA227137,SAMN02400290,2452266208,GEO,public,"run.zq,fastq,sra
","s3,gs,ncbi","s3.us-east-1,gs.US,ncbi.public",SRX374850,GSM1261016,Illumina HiSeq
2000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2015-07-22T00:00:00Z,2015-12-
15T17:29:00Z,2,GSM1261016,Primary Tumor,SRP032789,TNBC Breast Tumor
SRR1027172,RNA-
Seq,87,3534127320,PRJNA227137,SAMN02400292,1763543532,GEO,public,"sra,fastq,run.zq"
,"s3,gs,ncbi","gs.US,ncbi.public,s3.us-east-1",SRX374851,GSM1261017,Illumina HiSeq
2000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2013-11-14T00:00:00Z,2013-11-
07T13:55:00Z,1,GSM1261017,Primary Tumor,SRP032789,TNBC Breast Tumor
SRR1027173,RNA-
Seq,120,6468755760,PRJNA227137,SAMN02400295,3140723299,GEO,public,"fastq,sra,run.zq
","s3,gs,ncbi","ncbi.public,s3.us-east-1,gs.US",SRX374852,GSM1261018,Illumina HiSeq
2000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2015-07-22T00:00:00Z,2015-12-
15T17:42:00Z,2,GSM1261018,Primary Tumor,SRP032789,TNBC Breast Tumor
SRR1027174,RNA-
Seq,120,5913795600,PRJNA227137,SAMN02400293,2857042931,GEO,public,"sra,fastq,run.zq
","gs,ncbi,s3","gs.US,s3.us-east-1,ncbi.public",SRX374853,GSM1261019,Illumina HiSeq
2000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2015-07-22T00:00:00Z,2015-12-
15T17:53:00Z,2,GSM1261019,Primary Tumor,SRP032789,TNBC Breast Tumor
SRR1027175,RNA-
Seq,120,5479673520,PRJNA227137,SAMN02400296,2613914851,GEO,public,"run.zq,sra,fastq
","s3,ncbi,gs","s3.us-east-1,gs.US,ncbi.public",SRX374854,GSM1261020,Illumina HiSeq
2000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2015-07-22T00:00:00Z,2015-12-
15T17:53:00Z,2,GSM1261020,Primary Tumor,SRP032789,TNBC Breast Tumor
SRR1027176,RNA-
Seq,120,5790814320,PRJNA227137,SAMN02400297,2700343201,GEO,public,"fastq,sra,run.zq
","gs,s3,ncbi","ncbi.public,gs.US,s3.us-east-1",SRX374855,GSM1261021,Illumina HiSeq
2000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2015-07-22T00:00:00Z,2015-12-
15T17:52:00Z,2,GSM1261021,Primary Tumor,SRP032789,TNBC Breast Tumor
SRR1027188,RNA-
Seq,150,4928189400,PRJNA227137,SAMN02400308,3127349120,GEO,public,"sra,run.zq,fastq
","s3,ncbi,gs","ncbi.public,gs.US,s3.us-east-1",SRX374867,GSM1261033,Illumina HiSeq
2000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2015-07-22T00:00:00Z,2015-12-
15T18:01:00Z,2,GSM1261033,normal human breast organoids,SRP032789,Normal Breast
Organoids
SRR1027189,RNA-
Seq,150,4935104400,PRJNA227137,SAMN02400289,3114923985,GEO,public,"sra,run.zq,fastq
","gs,ncbi,s3","s3.us-east-1,gs.US,ncbi.public",SRX374868,GSM1261034,Illumina HiSeq
2000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2015-07-22T00:00:00Z,2015-12-
15T18:11:00Z,2,GSM1261034,normal human breast organoids,SRP032789,Normal Breast
Organoids
SRR1027190,RNA-
Seq,150,5576720700,PRJNA227137,SAMN02400288,3496934173,GEO,public,"run.zq,sra,fastq
","s3,gs,ncbi","ncbi.public,gs.US,s3.us-east-1",SRX374869,GSM1261035,Illumina HiSeq
2000,PAIRED,cDNA,TRANSCRIPTOMIC,Homo sapiens,ILLUMINA,2015-07-22T00:00:00Z,2015-12-
15T18:13:00Z,2,GSM1261035,normal human breast organoids,SRP032789,Normal Breast
Organoids

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