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2012 - Fascinating Cyclophanes With A Bright Futurew Peter J. Cragg and Kushal Sharma - C1cs15164a
2012 - Fascinating Cyclophanes With A Bright Futurew Peter J. Cragg and Kushal Sharma - C1cs15164a
2012 - Fascinating Cyclophanes With A Bright Futurew Peter J. Cragg and Kushal Sharma - C1cs15164a
Peter J. Cragg started his career Kushal Sharma received his BSc
in macrocyclic chemistry as a (Hons) in Pharmaceutical and
graduate student in the Atwood Chemical Sciences from the
group at the University of University of Brighton before
Alabama. After a year as a post- spending a year in industrial
doctoral researcher at SUNY formulation. In 2010 he started
Stony Brook, and a further postgraduate research in the
18 months at Reading Univer- University of Brighton’s
sity, he joined the University of Huxley Building laboratories
Brighton in 1993 where he is focusing on artificial ion
currently Reader in Supramole- channels incorporating calix[4]-
cular and Bioinorganic Chemis- arenes, oxacalix[3]arenes and
try. His research interests pillar[5]arenes.
include biomimetic artificial ion
Peter J. Cragg channels, computational chemis- Kushal Sharma
try and macrocyclic synthesis.
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of 13% prior to cyclisation Macrocycles were successfully Fig. 1 Cyclic hexa(p-phenylene oxide) and N-anisyl-substituted
prepared from the linear pentamer and hexamer, but not hexaaza[16]paracyclophane.
the tetramer, with [16]paracyclophane isolated in 31% yield
and [15]paracyclophane in 10% yield. The final cyclisation the manner of the calixarenes. Unlike calixarenes, formed from
step occurred via a Friedel–Crafts reaction, unusual in that 4-substituted phenols linked in the 2,6-positions, pillar[n]arenes
most routes to [1n]paracyclophanes require that one of the are cylindrical rather than conical in shape and more
aromatic rings is formed following cyclisation of a less strained closely resemble the tubular geometry of the cucurbit[n]urils.
precursor.10 Importantly, and unlike most other phenol-based macrocycles,
An alternative convergent synthesis of [15]paracyclophane pillar[n]arenes are readily functionalised on both upper and
was attempted, however, this gave an even lower yield in the lower rims. The structural similarities and differences between
final step. The authors stated that: these macrocycles are illustrated in Fig. 2.
‘‘the dismal yields obtained thus far in the final step preclude A majority of papers concerned with pillar[n]arene synthesis
a study of the p-complexing properties of [15]PCP and report the isolation of the cyclopentamer only. Cyclohexamers
[16]PCP’’9 have been prepared but always as minor products isolated in
Consequently the chemistry of these compounds was not approximately 10% yield.13 One reason for this is the degree of
pursued further. Interestingly, the authors also noted that: bond angle strain across the methylene bridge. A cyclo-
‘‘it is possible that Cannizzaro prepared [1n]PCPs as early tetramer would require an Ar–CH2–Ar bond angle of 901
as 1854’’ whereas a cyclohexamer would need one of 1201. Crystallo-
If true, it would make [1n]paracyclophanes the first synthetic graphic evidence shows that the average bond angle for the
macrocycles.w methylene bridge in dimethoxypillar[5]arene (DMpillar[5]arene)
Two other paracyclophanes deserve a mention here: is 111.31, close to the ideal 109.51 angle for sp3 hybridised
Osakada’s cyclic oligo(p-phenyleneoxide) compounds11 and carbons.8 It is also close to the ideal 1081 internal angle for an
Ito’s N-anisyl hexaaza[16]paracyclophane12 (Fig. 1). Both have unstrained pentagon. Consequently the cyclopentamer is the
the same paracyclophane structural motif but, in common main product from the macrocyclisation reactions.
with the other examples given, have no functional groups on The pillar[5]arenes have two interesting geometric
the aromatic rings. properties. Firstly, the presence of substituents in the 1- and
The pillar[n]arenes are distinct from these [1n]paracyclo- 4-positions leads to two possible planar chiral stereoisomers,
phanes by virtue of having cleavable alkoxy groups in the 1,4- Rp and Sp as shown in Fig. 3, that arise through the spatial
positions making them amenable to further functionalisation in arrangement of the out of plane substituents. Secondly,
rotation of one or more of the aromatic rings through the
macrocyclic annulus generates conformational isomers. These
conformers can be likened to those available to the better
known calix[4]arenes. Fig. 4 illustrates the possible conformers
of Rp pillar[5]arene as identified by Ogoshi and Nakamoto:14
all rings in the same orientation, one ring inverted, two
adjacent rings inverted, and two non-adjacent rings inverted.
By analogy with calixarenes these can be described as cone,
partial cone, 1,2-alternate and 1,3-alternate, respectively.
The X-ray crystal structures of DMpillar[5]arene and
pillar[5]arene in Fig. 5 show that the former is isolated in the
D5 symmetric cone conformation, as a racemic mixture of Rp
and Sp enantiomers,8 whereas the latter has lost this symmetry.15
Two of the pillar[5]arene rings have become inverted with
respect to the remaining three to give the 1,3-alternate conformer
with C1 symmetry. This scrambling of the macrocycle appears
to have occurred to allow stabilising hydrogen bonds to form.
It would therefore seem likely that any attempt to extend the
pillar[5]arene cavity of such a low symmetry compound through
Scheme 1 Synthesis of [15]paracyclophane. O-alkylation would generate a range of conformers,16 not to
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isolated.
substituted pillar[5]arenes can be prepared by the same general
Using a similar approach Huang reported that reaction of
method to give ethoxy, n-propoxy, n-butoxy, n-pentyloxy,
1,4-diisobutoxybenzene with paraformaldehyde and HBr in
n-hexyloxy or n-dodecanoxy groups in the 1,4-positions. The
glacial acetic acid led to the formation of the bis(bromomethyl)
yields of these derivatives varied from 7 to 28%.17
derivative. Following treatment with sodium methoxide the
Ogoshi also used this method to prepare pillar[5]arenes from
resulting di(methoxymethyl) derivatives were cyclised in refluxing
1,4-bis[2(S)-methylbutoxy)benzene and a racemic mixture of
CH2Cl2, with stoichiometric 4-toluenesulfonic acid hydrate, to
the R and S enantiomers, achieving yields of 10% and 67%,
give diisobutoxypillar[5]- and [6]arene with yields of 73% and
respectively.18 The compounds were subsequently used to
5%, respectively.20 As the first two steps are essentially quanti-
investigate the planar chirality of the pillar[5]arenes.
tative the method is an attractive alternative to direct cyclisation
In a later paper, variation in the ratio of 1,4-dimethoxy-
of 1,4-dialkoxybenzene precursors, especially when bulky sub-
benzene to paraformaldehyde was investigated and a value of
stituents are involved (Scheme 4).
1 : 3 found to give DMpillar[5]arene in an improved yield of
71%.15 While this can be achieved in 3 min, optimum condi-
tions for the reaction were determined to be 30 1C for 30 min. Asymmetric pillar[5]arenes
The reaction is deceptively simple: 1,4-dimethoxybenzene is Asymmetric pillar[5]arenes, such as 1-ethoxy-4-methoxypillar[5]-
first dissolved in dichloroethane then paraformaldehyde is arene (EMpillar[5]arene), can be prepared through cyclisation of
added. The reaction mixture is stirred rapidly under nitrogen asymmetric precursors using Ogoshi’s method. Extensive NMR
before BF3OEt2 is added in a single portion. There is an studies carried out by Ogoshi and Nakamoto21 and Huang16 on
immediate change from colourless to an intense blue-green the asymmetric EMpillar[5]arene, synthesised from 1-ethoxy-4-
colour. It appears that temperature is critical as much above methoxybenzene, showed that rotation through the annulus was
30 1C an intractable dimethoxybenzene-formaldehyde poly- too slow on the variable temperature NMR timescale to be
mer is formed. Despite this, the method is attractive due to the observed. Initially, Ogoshi reported 2D ROESY data which
low cost of starting materials and the ability to significantly indicated that in solution the product was in a single form with
scale up the reaction. Upon completion the reaction mixture is all the methoxy groups coplanar and the ethoxy groups on the
poured into methanol whereupon an off-white solid precipi- opposite face rather than the expected statistical distribution
tates. The fine powder can be recrystallised from either of conformers. 1H NMR in DMSO-d6 showed that signals
CH3CN or CHCl3/acetone (1 : 1 v/v) to give a white, micro- due to the methylene bridges were split even at 110 1C whereas
crystalline solid. signals from the methyl and ethyl substituents, although
initially split, coalesced into singlets above 110 1C. A swinging
Cyclisation of 1,4-disubstituted-2,5-dimethoxymethybenzene motion of the aromatic moieties, by which they rock in and
and other derivatives out of the central cavity, was invoked as the reason for the
changes in multiplicity. Huang reported the crystal structure
Following the publication of the initial low yielding synthesis of EMpillar[5]arene (in his ESI16) which serves to illustrate the
of DMpillar[5]arene in 2008 the race was on to find an
improved route. Cao and Meier reported that refluxing
2,5-bis(benzyloxymethyl)-1,4-diethoxybenzene in CH2Cl2
containing catalytic 4-toluenesulfonic acid gave the corres-
ponding diethoxypillar[5]arene in 75% yield (Scheme 3).19 The
2,5-bis(ethoxymethyl) analogue was even more efficient giving
a 92% yield and other ethers were similarly effective. This
route was also used to prepare DMpillar[5]arene and di-n-
butylpillar[5]arene. In all cases macrocycles were formed
almost quantitatively by this method and column chromato-
graphy (petroleum ether/ethyl acetate, 40 : 1 v/v, on silica) was
used to separate the pillar[5]arenes from their pillar[6]arene
homologues.
This was the first method to generate pillar[6]arenes, however,
as residues from other routes were assumed to be unwanted Scheme 4 Huang’s general three step synthesis of 1,4-dialkoxypillar[5]-
polymers and not investigated further it may transpire that arenes.
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similarities between the conformers’ properties. Despite isola- has C1 symmetry subsequent O-alkylation generates a D5 sym-
tion by chromatography and displaying a single spot by TLC, metric product exclusively which makes product isolation and
the unit cell of the crystalline compound contained two purification relatively simple.
dissimilar molecules; one a partial cone conformer and the Ogoshi and Nakamoto have shown that reaction with
other a 1,3-alternate conformer. bromoethylacetate followed by cleavage of the ester with
Another asymmetric pillar[5]arene, BMpillar[5]arene, NaH and addition of NH3, as in Scheme 6, yields a water
formed from 1-butoxy-4-methoxybenzene, was reported both soluble pillar[5]arene.22 Given the poor solubility of
by Cao and Meier19 and Huang.16 Unlike the less bulky pillar[5]arenes in general this is an important development
EMpillar[5]arene, BMpillar[5]arene gave four spots by TLC, analogous to the synthesis of the water-soluble sulfonate
each one corresponding to one of the possible conformers, derivatives in the calixarene field.23 An alternative route,
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which could be separated by chromatography and crystallised reported by Hou, can be used to prepare an amine derivative
from CH3CN19 or n-hexane.16 Huang has systematically (Scheme 6). Reduction of the acetate to the alcohol with
shown that, building up from the monomer to the cyclic LiAlH4 followed by bromination with CBr4 gave the
pentamers, there are only two routes to the cone conformer, deca(ethylbromide). Treatment with NaN3 followed by hydro-
one of which is in the Rp form and one in the Sp. The same genation in the presence of Pd/C gave the desired decaamine in
analysis shows that there are 10 routes to each of the partial an impressive 33% yield from the pillar[5]arene parent.24
cone, 1,2-alternate and 1,3-alternate conformers, half of which Ogoshi and Nakamoto synthesised pillar[5]arenes with
give rise to Rp and the other half the Sp forms. This gives a bulky methyl- and ethylcyclohexane substituents to demon-
theoretical conformer distribution of 1 : 5 : 5 : 5 which was strate that the Rp and Sp forms could be separated by HPLC
closely matched experimentally by both groups.16 using a chiral column.25 As the first proof of planar chirality
this represented a valuable application of this synthetic
approach.
Pillar[5]arene and its reactions
An alternative to cyclising appropriately 1,4-disubstituted
hydroquinone derivatives is to start from DMpillar[5]arene
and remove the methyl groups. Pillar[5]arene is readily
obtained from DMpillar[5]arene by the action of BBr3 in
CHCl3 over three days as shown in Scheme 5. Initially the
conversion was found to be 30%8 but when anhydrous chloro-
form was used this became quantitative.15 The 1H NMR for
the compound in acetone-d6 is very simple comprising singlets
at 7.96 ppm (–OH), 6.66 ppm (ArH) and 3.59 ppm (–CH2–)
in the expected 1 : 1 : 1 ratio. This indicates that, although the
1,3-alternate conformer crystallises preferentially, pillar[5]arene
remains fluxional in solution. Pillar[5]arene is consequently a
valuable starting material from which the macrocyclic frame-
work can be extended by various means, notably by reaction
with alkyl halides. Pillar[5]arene has greatly improved solubility
over its dimethoxy derivative in CH3OH, CH3CN, acetone,
DMF and DMSO which opens up a potentially vast range of
reaction conditions.
Reaction of pillar[5]arene with an alkylating agent in the
presence of a suitable base is the simplest route to extended
pillar[5]arenes. This would appear unlikely to succeed as the
steric crowding around the macrocyclic annulus should work
against complete decasubstitution. Nevertheless, deprotona-
tion with NaH followed by the addition of excess alkyl halide
has successfully produced numerous pillar[5]arenes containing
a range of substituents, from alkyl chains and cyclohexyl
groups to esters and polyethers, many of which are amenable
to further functionalisation. Although crystalline pillar[5]arene
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intensities.
Host–guest inclusion complexes were always going to be
important aspects of the chemistry of pillar[5]arene deriva-
tives. As with other macrocycles, pillar[5]arenes can be used as
molecular ‘beads’ and threaded onto a ‘string’ composed of
linked viologens as discussed in Ogoshi and Nakamoto’s
original paper as well as many more recent reports.8,14,35,36
The first report of pillar[5]arene inclusion behaviour used 1H
NMR to investigate the degree to which host–guest inter- Fig. 10 Inclusion complexes and rotaxanes formed from pillar[5]-
actions were present. In acetone-d6 the pyridinium and arene derivatives.
a-methylene proton signals of octylpyridinium hexafluoro-
phosphate exhibited large upfield shifts, approaching 1 ppm, repeat pattern found in the pillar[5]arenes is much more
indicating that the pyridinium group was held within the amenable to the complementary interactions between shuttles
pillar[5]arene annulus. Only the pyridinum proton signals and aromatic ‘stations’ seen in Stoddart’s benzocrown ether
in the analogous di(octyl)viologen salt were shifted which catenanes.42 Consequently there should be an interesting
indicated that the octyl substituents were external to the future for pillar[5]arene rotaxanes with the potential for them
macrocyclic cavity. Complexation was verified by MALDI- to find applications as ‘on/off’ states in molecular computers.
TOF mass spectrometry which gave signals for the doubly To date there has been no investigation of the simple
charged complex. When a di(adamantyl)viologen salt was coordination or inclusion chemistry of the pillar[5]arenes
added to pillar[5]arene no changes in spectra were observed although Lau and Yu have undertaken a computational study
as the adamantyl groups were too large to enter the macro- of pillar[n]quinones (n = 3–7) to investigate both tube forma-
cycle’s cavity. tion and anion binding.43 Calculations using density func-
Rotaxanes can be prepared using a similar method whereby tional theory predicted that the pillar[5]quinone was the most
a polymer comprised of viologen groups linked by propyl or stable of the compounds investigated, though the cyclo-
octyl chains can be used as ‘threads’ for pillar[5]arene. The tetramer, cyclohexamer and cycloheptamer were also likely
pseudorotaxane formed in this manner35 can be capped with to be stable, and that both pillar[5]- and [7]quinones should
adamantyl groups as the hydrogen bonding network between form tubular dimers. It was also determined that pillar[5]-
adjacent pillar[5]arenes holds the ‘beads’ together.36 The quinone should form stable complexes with both Cl! and Br!
resulting [3]rotaxane contains three pillar[5]arene shuttles with the former being marginally more stable (Fig. 11).
and is yellow in DMSO but turns violet upon heating. The Complexation required little structural rearrangement but
thermally induced colour change is a result of weakened would involve significant anion-p interactions. If experi-
hydrogen bonds which allows the pillar[5]arenes to shuttle mentally verifiable, the predicted Cl! binding by pillar[5]quinone
rapidly along the rotaxane axis, transferring electrons from the may have important biomimetic consequences as it has been
shuttles to the viologen groups, and stabilising a radical proposed that the hydrophobic central pore of transmembrane
cationic species. Examples of these inclusion complexes are COMP proteins formed by five interlocking polypeptide strands
shown in Fig. 10. may act as Cl! channels.44
Other quaternarised nitrogen-containing aromatic systems
can also act as molecular ‘threads’.37 Alkyl substituted para-
Applications
quats form pseudo[2]rotaxanes and even 1,4-bis(pyridinium)-
butane forms a stable 1 : 1 complex with an association In the first example of a pillar[5]arene-based sensor, Stoddart
constant in the region of 103 M!1. The closely related reported a fluorescent copillar[5]arene that is quenched when
1,4-bis[N-(N 0 -hydroimidazolium)]butane ‘thread’ forms a binding alkanediamines.45 The inspiration for this derivative
similar pseudo[2]rotaxane under pH control.38 This affinity came from the realisation that alkyldiamines were bound by
for charged species has been extended to ionic liquids, speci- DMpillar[5]arene and that this affinity could be exploited if the
fically 1-hexyl-3-methylimidazolium bromide, which forms a binding event could be reported. Initial experiments deter-
stable 1 : 1 complex with pillar[5]arene.39 mined that DMpillar[5]arene could form pseudorotaxanes
The rotaxanes and pseudorotaxanes formed by pillar[5]- with 1,8-diaminooctane: significant upfield shifts were seen
arenes are reminiscent of similar supramolecules formed with in the 1H NMR for all hydrogens in the molecule’s alkyl
cucurbituril40 and cyclodextrin41 shuttles but the aromatic backbone. Similar, though weaker, effects were observed for
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The chemistry of pillar[5]arenes, and their higher homo- 21 T. Ogoshi, K. Kitajima, T. A. Yamagishi and Y. Nakamoto, Org.
logues, has only just started to be uncovered, yet despite their Lett., 2010, 12, 636–638.
22 T. Ogoshi, M. Hashizume, T. A. Yamagishi and Y. Nakamoto,
recent discovery, they look set to have a very exciting future in Chem. Commun., 2010, 46, 3708–3710.
the macrocyclic world. 23 A. W. Coleman, S. G. Bott, S. D. Morley, C. M. Means,
K. D. Robinson, H. Zhang and J. L. Atwood, Angew. Chem.,
Int. Ed. Engl., 1998, 27, 1361–1362.
Acknowledgements 24 X.-B. Hu, L. Chen, W. Si, Y. Yu and J.-L. Hou, Chem. Commun.,
2011, 47, 4694–4696.
We wish to acknowledge the use of the EPSRC’s Chemical 25 T. Ogoshi, K. Masaki, R. Shiga, K. Kitajima and A. Yamagishi,
Database Service at Daresbury. KS thanks the University of Org. Lett., 2011, 13, 1264–1266.
Brighton for a Research Studentship. 26 T. Ogoshi, R. Shiga, M. Hashizume and T. Yamagishi, Chem.
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