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Hydrogen sulfide (H2S) is an important endogenous signaling molecule with multiple biological functions.
Based on the thiolysis of NBD (7-nitro-1,2,3-benzoxadiazole) amine, herein we rationally design and syn-
thesize a new fluorescent probe 1 for the detection of mitochondrial H2S in living cells. Probe 1 displays
Received 30th December 2018, bright red-emitting fluorescence after H2S activation (ϕ, 0.77). 1 shows higher selectivity and sensitivity for
Accepted 1st March 2019
H2S than the red-emitting probe Rho-NBD (ChemBioChem, 2016, 17, 962). Moreover, 1 is water-soluble,
DOI: 10.1039/c8ob03219j cell-membrane-permeable, of low cytotoxicity and mitochondria-targeting, and can be employed for
rsc.li/obc monitoring mitochondrial H2S in living cells.
a
State Key Laboratory of Elemento-Organic Chemistry and Department of Chemical
Biology, National Engineering Research Center of Pesticide (Tianjin),
College of Chemistry, Nankai University, Tianjin 300071, China.
E-mail: zhenxi@nankai.edu.cn
b
State Key Laboratory of Organic-Inorganic Composites and Beijing Key Laboratory of
Bioprocess, Beijing University of Chemical Technology (BUCT), Beijing 100029,
China. E-mail: yilong@mail.buct.edu.cn
c
Collaborative Innovation Center of Chemical Science and Engineering (Tianjin),
Tianjin 300071, China
† Electronic supplementary information (ESI) available. See DOI: 10.1039/
c8ob03219j Scheme 1 (A) Thiolysis of NBD amine for fluorescence sensing of H2S.
‡ These authors contributed equally to this work. (B) Chemical structures of three NBD-based H2S probes.
This journal is © The Royal Society of Chemistry 2019 Org. Biomol. Chem., 2019, 17, 3389–3395 | 3389
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3390 | Org. Biomol. Chem., 2019, 17, 3389–3395 This journal is © The Royal Society of Chemistry 2019
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molecule was nearly negligible except for H2S (Fig. 4), implying
that 1 can be used to selectively detect H2S in biological
samples. Additionally, we also investigated the fluorescence
response of 1 to H2S at different pH values. The results indi-
cated that the probe can be functionalized over pH ranging
from 7.0 to 9.0 (Fig. S3†).
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Conclusions
A new NBD-based fluorescent turn-on probe is developed for
H2S detection in aqueous buffer and in living cells. The probe
is based on the fast and selective thiolysis of NBD amine,
which can be a general design strategy for H2S probes.52 Probe
1 shows 19-fold turn-on fluorescence at 585 nm upon H2S acti-
vation. 1 contains a positive charge, which is useful for fast
sensing of H2S (k2 = 27.8 M−1 s−1) and mitochondria-targeting.
1 exhibits excellent selectivity toward H2S over millimolar
biothiols in physiological buffer. Moreover, 1 is successfully
applied in the bioimaging of H2S in living cells and zebrafish.
This probe could be a useful tool for potential applications in
H2S biology.
Experimental
Fig. 7 Confocal microscopy images of the mitochondrion in living
cells. Cells were co-stained with 1 (10 μM), L-Cys (100 μM) and commer- Materials and methods
cial MitoTracker® Green FM (2.5 μM). (A) Red channel (555–655 nm,
All chemicals and solvents used for the synthesis were pur-
excitation at 543 nm); (B) green channel (500–530 nm, excitation at
488 nm); (C) a merged graph from fluorescence images of 1 and
chased from commercial suppliers and applied directly in the
MitoTracker® Green FM. Scale bars: 50 μm. (D) Intensity correlation plots experiments without further purification. The progress of the
of the green channel and the red channel. Pearson’s coefficient: 0.947. reaction was monitored by TLC on pre-coated silica plates
3392 | Org. Biomol. Chem., 2019, 17, 3389–3395 This journal is © The Royal Society of Chemistry 2019
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(Merck 60F-254, 250 µm in thickness), and spots were visual- δ 8.00 (d, J = 7.6 Hz, 1H), 7.64 (dt, J = 22.4, 7.2 Hz, 2H), 7.15 (d,
ized by basic KMnO4, UV light or iodine. Merck silica gel 60 J = 7.2 Hz, 1H), 6.60 (d, J = 8.4 Hz, 2H), 6.22 (s, 2H), 6.14 (d, J =
(100–200 mesh) was used for general column chromatography 8.4 Hz, 2H), 3.94 (t, J = 7.2 Hz, 8H), 2.48–2.31 (m, 4H); 13C
purification. 1H NMR and 13C NMR spectra were recorded on a NMR (101 MHz, CD2Cl2) δ 169.62, 154.26, 153.33, 152.49,
Bruker 400 spectrometer. Chemical shifts are reported in parts 134.87, 129.77, 129.16, 128.18, 125.34, 124.61, 52.50, 17.01.
per million with respect to the internal standard tetramethyl- HRMS (ESI): m/z [M + H]+ calcd for C26H22N2O3: 410.1630,
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silane (Si(CH3)4 = 0.00 ppm) or residual solvent peaks (CD2Cl2 found: 411.1706.
= 5.32 ppm; CDCl3 = 7.26 ppm; DMSO-d6 = 2.5 ppm). 1H NMR
coupling constants ( J) are reported in hertz (Hz), and multi- Azetidinyl-rhodamine-NBD dyad 1
plicity is indicated as the following: s (singlet), d (doublet), 2-(3-(Azetidin-1-ium-1-ylidene)-6-(azetidin-1-yl)-3H-xanthen-9-yl)
t (triplet), dd (doublet of doublets), m (multiple). High-resolu- benzoate (0.134 g, 0.33 mmol) was dissolved in 8 ml DMF, fol-
tion mass spectra (HRMS) were obtained on an Agilent lowed by the addition of HATU (0.144 g, 0.38 mmol) and
6540 UHD Accurate-Mass Q-TOF LC/MS or Varian 7.0 T DIPEA (148 μl, 0.75 mmol). The solution was stirred for 5 min
FTICR-MS. The UV-visible spectra were recorded on a UV-3600 and NBD-piperazine33,51 (0.068 g, 2.83 mmol) was added to
UV-VIS-NIR spectrophotometer (Shimadzu, Japan). Fluorescence the solution; stirring was continued for 12 h at room tempera-
study was carried out using an F-280 spectrophotometer ture. After completion of the reaction DMF was removed
(Tianjin Gangdong Sci & Tech., Development. Co., Ltd). in vacuo. The residue was purified by silica gel column chrom-
atography to yield dark-red solid 1 (100 mg, 59%). Rf = 0.7
3-Oxo-3H-spiro[isobenzofuran-1,9′-xanthene]-3′,6′-diyl bis (CH3OH/CH2Cl2/NH3 = 2/10/0.5). 1H NMR (400 MHz, DMSO-
(trifluoromethanesulfonate) 2 d6) δ 8.53 (d, J = 9.0 Hz, 1H), 7.77 (s, 3H), 7.53 (s, 1H), 7.14 (d,
A two-necked round-bottom flask was charged with fluorescein J = 9.2 Hz, 2H), 6.64 (d, J = 8.8 Hz, 2H), 6.59–6.46 (m, 3H), 4.25
sodium (5 g, 15.04 mmol) in anhydrous CH2Cl2 (60 mL) and (t, J = 7.2 Hz, 8H), 4.01 (s, 4H), 3.71 (s, 2H), 3.54 (s, 2H),
cooled to 0 °C. Pyridine (9.74 ml, 12.04 mmol, 8.0 eq.) and tri- 2.48–2.36 (m, 4H). 13C NMR (101 MHz, DMSO-d6) δ 166.80,
fluoromethanesulfonic anhydride (10.12 ml, 60.2 mmol, 156.46, 155.92, 155.69, 145.26, 144.73, 136.29, 135.05, 131.71,
4.0 eq.) were added slowly into the mixture under an inert 130.82, 130.37, 129.94, 127.54, 121.49, 113.14, 112.47, 103.38,
atmosphere. The reaction mixture was stirred at room tempera- 93.97, 51.79, 15.41. HRMS (ESI): calcd for C36H32N7O5+:
ture for 4 h. The reaction was quenched with water, and the 642.2459, found m/z [M]+: 642.2462.
reaction mixture extracted with CH2Cl2, washed with saturated
brine, and dried over anhydrous sodium sulfate. After the Solution preparation method for spectroscopic studies
solvent was removed in vacuo, recrystallization from ethyl All spectroscopic measurements were performed in PBS buffer
acetate and hexanes afforded the pure product as an off-white (20 mM, pH 7.4) in a 3 ml cuvette with 2 ml solution. 1 was
solid (7.4 g) with 83% yield. Rf = 0.7 (ethyl acetate/hexanes = 3/ dissolved in DMSO to prepare the stock solutions with a con-
10); 1H NMR (400 MHz, DMSO-d6) δ 8.09 (d, J = 7.2 Hz, 1H), centration of 5 mM. 1–1000 mM stock solutions of Na2S in
7.87–7.76 (m, 4H), 7.50 (d, J = 7.6 Hz, 1H), 7.32 (dd, J = 8.8, 2.4 degassed PBS buffer were used as the H2S source. The probe
Hz, 2H), 7.12 (d, J = 8.8 Hz, 2H); 13C NMR (101 MHz, DMSO- was diluted in PBS buffer to achieve the final concentration of
d6) δ 168.12, 151.85, 150.74, 149.82, 136.24, 130.89, 130.62, 2–5 µM. For the selectivity tests, different biologically relevant
125.28, 125.02, 124.20, 119.80, 119.38, 118.01, 116.61, 110.84, species (100 mM) were prepared as stock solutions in PBS
79.66; HRMS (ESI): m/z [M]+ calcd for C22H10F6O9S2: 595.9670, buffer or DMSO. The •OH was generated by the Fenton reac-
found: 596.9746. tion in which ferrous chloride was added in the presence of
10 equiv. of H2O2. The ONOO− was generated by the reaction
2-(3-(Azetidin-1-ium-1-ylidene)-6-(azetidin-1-yl)-3H-xanthen- of nitrous acid with hydrogen peroxide in acidic solution
9-yl)benzoate 3 (the concentration was determined by UV spectrophotometry
A 25 ml two-necked round bottom flask was charged with at 302 nm).53 All species were incubated at room temperature
fluorescein ditriflate (0.15 g, 25.2 mmol), 2-dicyclohexyl- for 30 min and then the spectra were recorded under excitation
phosphino-2′,4′,6′-triisopropylbiphenyl (Xphos, 0.036 g, at 565 nm.
75.4 μmol. 0.3 eq.), Cs2CO3 (0.23 g, 704 μmol, 2.8 eq.) and tris
(dibenzylideneacetone)dipalladium(0) (Pd2dba3, 0.023 g, Cell culture
25.2 mmol. 0.1 eq.) in dioxane (2 mL). Argon was fluxed before Complete growth medium was used to culture human embryo-
adding azetidine (40.6 μL, 604 μmol, 2.4 eq.), and the reaction nic kidney HEK-293A cells, which contained high glucose
mixture was stirred at 100 °C under an argon atmosphere for DMEM (Gibco) supplemented with FBS (10%), penicillin (100
18 h. After completion the reaction system was cooled to room U ml−1), streptomycin (10 mg ml−1), and L-glutamine (4 mM).
temperature, diluted with CH3OH, filtered with Celite, and The cells were maintained in exponential growth, and then
concentrated in vacuo. Purification by silica gel chromato- seeded in a 35 mm glass-bottom plate. The cells were passaged
graphy using a solvent system (0–7% CH3OH (2 M NH3)/ every 2–3 days and used between passages 3 and 10.
CH2CI2) afforded a purple solid (0.098 g, 95%). Rf = 0.6 Cytotoxicity assay. The cytotoxicity of 1 was determined
(CH3OH/CH2Cl2/NH3 = 2/10/0.5); 1H NMR (400 MHz, CD2Cl2) using a xCELLigence RTCA S16 (ACEA Biosciences),50 which is
This journal is © The Royal Society of Chemistry 2019 Org. Biomol. Chem., 2019, 17, 3389–3395 | 3393
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an instrument that uses microelectronic plates integrated with Notes and references
gold microelectrode arrays on a glass substrate in the bottom
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Conflicts of interest 22 Q. Q. Wan, Y. C. Song, Z. Li, X. H. Gao and H. M. Ma,
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There are no conflicts to declare. 23 M. D. Hartle and M. D. Pluth, Chem. Soc. Rev., 2016, 45, 6108.
24 L. Zhang, W. Q. Meng, L. Lu, Y. S. Xue, C. Li, F. Zou, Y. Liu
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