Plasmodium falciparum Dd2, whole genome shotgun sequencing project

GenBank: AASM00000000.1
This entry is the master record for a whole genome shotgun sequencing project and contains no sequence data.

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LOCUS AASM01000000 4511 rc DNA linear INV 27-MAY-2022

DEFINITION Plasmodium falciparum Dd2, whole genome shotgun sequencing project.
ACCESSION AASM00000000
VERSION AASM00000000.1
DBLINK BioProject: PRJNA17829
BioSample: SAMN02953660
KEYWORDS WGS.
SOURCE Plasmodium falciparum Dd2
ORGANISM Plasmodium falciparum Dd2
Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida;
Plasmodiidae; Plasmodium; Plasmodium (Laverania).
REFERENCE 1 (bases 1 to 4511)
AUTHORS Volkman,S.K., Sabeti,P.C., DeCaprio,D., Neafsey,D.E.,
Schaffner,S.F., Milner,D.A. Jr., Daily,J.P., Sarr,O., Ndiaye,D.,
Ndir,O., Mboup,S., Duraisingh,M.T., Lukens,A., Derr,A.,
Stange-Thomann,N., Waggoner,S., Onofrio,R., Ziaugra,L., Mauceli,E.,
Gnerre,S., Jaffe,D.B., Zainoun,J., Wiegand,R.C., Birren,B.W.,
Hartl,D.L., Galagan,J.E., Lander,E.S. and Wirth,D.F.
TITLE A genome-wide map of diversity in Plasmodium falciparum
JOURNAL Nat Genet 39 (1), 113-119 (2007)
PUBMED 17159979
REFERENCE 2 (bases 1 to 4511)
AUTHORS Volkman,S.K., Neafsey,D.E., Dash,A.P., Chitnis,C.E., Hartl,D.L.,
Young,S.K., Zeng,Q., Koehrsen,M., Alvarado,L., Berlin,A.,
Borenstein,D., Chapman,S.B., Chen,Z., Engels,R., Freedman,E.,
Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heilman,E.R.,
Heiman,D.I., Howarth,C., Jen,D., Larson,L., Mehta,T., Neiman,D.,
Park,D., Pearson,M., Roberts,A., Saif,S., Shea,T., Shenoy,N.,
Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yandava,C.,
Haas,B., Henn,M.R., Nusbaum,C. and Birren,B.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE Annotation of Plasmodium falciparum Dd2
JOURNAL Unpublished
REFERENCE 3 (bases 1 to 4511)
AUTHORS Birren,B., Lander,E., Galagan,J., Nusbaum,C., Devon,K., Henn,M.,
Jaffe,D., Butler,J., Alvarez,P., Gnerre,S., Grabherr,M., Kleber,M.,
Mauceli,E., Brockman,W., MacCallum,I.A., Rounsley,S., Young,S.,
LaButti,K., Pushparaj,V., DeCaprio,D., Crawford,M., Koehrsen,M.,
Engels,R., Montgomery,P., Pearson,M., Howarth,C., Larson,L.,
Luoma,S., White,J., Kodira,C., Zeng,Q., O'Leary,S., Yandava,C.,
Alvarado,L., Wirth,D., Volkman,S. and Hartl,D.
CONSRTM The Broad Institute Genome Sequencing Platform
TITLE Direct Submission
JOURNAL Submitted (06-SEP-2006) Broad Institute of MIT and Harvard, 7
Cambridge Center, Cambridge, MA 02142, USA
COMMENT The Plasmodium falciparum Dd2 whole genome shotgun (WGS) project
has the project accession AASM00000000. This version of the
project (01) has the accession number AASM01000000, and consists of
sequences AASM01000001-AASM01004511.
Annotation was added to the scaffolds in August 2015.
The VEuPathDB Bioinformatics Resource Center (www.veupathdb.org)
may also have contributed to the annotation of this genome.
Annotation and related data can be viewed and updated at
http://veupathdb.org and inquiries can be sent to
help@veupathdb.org.
FEATURES Location/Qualifiers
source 1..4511
/organism="Plasmodium falciparum Dd2"
/mol_type="genomic DNA"
/isolate="Dd2"
/db_xref="taxon:57267"
WGS AASM01000001-AASM01004511
WGS_SCAFLD DS016058-DS016975
WGS_SCAFLD GG701595-GG703513