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Padhle Akshay Biology Page 199
Padhle Akshay Biology Page 199
Padhle Akshay Biology Page 199
What is Biodiversity?
Taxomomy
Nomenclature
Naming of living organisms of a particular organisms so it is
known by same name all around the world
Two international codes that are established for nomenclature.
1. ICBN-International Code for Botanical Nomenclature
2. ICZN-International Code for Zoological Nomenclature
Need of classification -
To understand how various organisms are related and how they
evolved.
Understanding the key characteristics of a group requires more
than just studying one or two organisms
There aren't many different types of organisms in one place.
The connection between different groups of organisms can be
better understood through classification.
It helps in understanding the evolutionary relationships of species.
Binomial Nomenclature
Proposed by Carolus Linnaeus
In binomial nomenclature each name has two components
1.Generic name (genus)
2.Specific epithet (species)
Example-Homo sapiens
Rules
Genus name starts with capital letters and specific epithet starts
with small letters
Example: Musca domesticata
Biological names are generally in Latin, written in italics and when
handwritten are separately underlined to indicate their Latin
origin.
Example: Mangifera indica
First word in a biological name is genus and second component is
species
Example: Rana tigrina
The name of the author is written in an abbreviated form after
the species epithet
Example:Clitoria ternatea Linn.
Linn.-Carl Linnaeus
Taxonomic Categories
The system of organising organisms in a definite sequence of various
taxonomic categories in a descending order. (First proposed by Carolus
Linneaus)
Each category, referred to as a unit of classification, represent a rank, called
as taxon
Species
Group of individuals organisms with fundamental similarity
Genus
Group of related species which has more characters
in common in comparison to species
Family
Group of related genre with still less number
similarities as compared to genus and species
Order
Assemblage of family which exhibit a few similar character
Class
Related order having common character
Phylum
Classes having same features in common constitute the next higher
category
Kingdom
All organisms whether plants or animals belonging to various Phyla are
assigned to the highest category
Systematics
Taxonomy is the study of classifying organisms into kingdoms, both past and
present, and understanding their relationships, originating from the Latin
word 'systema' meaning systematic arrangement
Phylogenetics is the study of the evolutionary history and connections among
or within groups of organisms. These connections are determined by
phylogenetic inference, which relies on observed heritable traits like DNA
sequences, protein amino acid sequences, or morphology. The outcome of this
analysis is a phylogenetic tree—a diagram that represents a hypothesis of
relationships reflecting the evolutionary history of a group of organisms.
Given by Linnaeus
Animalia Plantae
Demerits
This type of classification fails to distinguish between eukaryotes and prokaryotes,unicellular and
multicellular organisms, photosynthetic and non- photosynthetic organisms.
3 Domain system
Eubacteria Archaebacteria
Given by R.H.
Whittaker
Monera
•Bacteria are the sole member of Kingdom Monera and most abundant micro-organisms
•Bacterial structure is very simple, yet their behaviour are very complex,also shows the most extensive
metabolic diversity
Monera
•Based on
their shape
Archaebacteria Eubacteria
(True Bacteria)
Archaebacteria
•They are found in the most harsh conditions on the planet,like extreme salty areas
( halophiles),hot springs (thermoacidophiles)and marshy area(methanogen).
•Methanogen are also found in the guts of ruminant animal such as cow and buffalo
•Methanogens are also responsible for biogas (methane)
•Archaebacteria has different cell wall structure and other unique features that help them to
live in these harsh conditions.
Eubacteria
Chemosynthetic Bacteria -
•These bacteria oxidise various inorganic substances such as nitrates,nitites and ammonium and use
released energy for their ATP production
• They play a important roles in recycling nutrients like nitrogen, phosphorus ,iron and sulphur etc.
Heterotrophic bacteria -
•Most abundant in nature and majority of decomposers.
•They have a significant role in your life like making curd from milk to production of antibiotics
•But there are some pathogens causing damage to animals ,crops and plants,like cholera, typhoid
and tetanus are very known disease caused by bacteria.
Reproduction -
•They reproduce mainly by fission but in unfavorable condition they can produce spores.
•They can also reproduce by a sort of sexual reproduction by adopting a primitive type of DNA
transfer from one bacterium to other.
Protista
• All single -celled eukaryotes are placed under Protista,but the boundaries of this kingdom are not
will defined, members of Protista are primarily aquatic
• The protista cell body contains a well defined nucleus and other membrane -bound organelles.
•They reproduce by both ways asexual (cell fission) and sexual(zygote formation)
Chrysophytes
•This group includes diatoms and golden algae, most of them are photosynthetic and mostly found in
fresh water and marine as well, diatoms are 'cheif produces ' in the ocean.
•The cell wall of diatoms form two thin overlapping shells which fit together as in a soap box.The wall
of are embedded with silica and thus the wall are indestructible
•Saprophytic protists,body moves along decaying twigs and leaves engulfing organic matter.
•Under favourable conditions they form an aggregation called which can spread several feet , but in
unfavorable condition the plasmodium forms fruiting bodies bearing spores at their tips
•The spores posses true walls , extremely resistant and survive for many years even under adverse
conditions ( dispersion through air)
.
Protozoans
Amoeboid protozoans: Live in fresh water, sea water, or moist soil. Move using pseudopodia. Marine
forms have silica shells. Some, like Entamoeba, are parasites.
Flagellated protozoans: Free-living or parasitic. Move with flagella. Parasitic forms cause diseases like
sleeping sickness (e.g., Trypanosoma).
Ciliated protozoans: Aquatic and active due to cilia. Have a gullet for feeding. Example: Paramecium.
Sporozoans: Diverse organisms with infectious spore-like stages. Notable example: Plasmodium, which
causes malaria
Fungi
•Show great diversity in morphology and habitat
•All members of this kingdom are heterotrophic organisms.
•All fungi are filamentous, except Yeast which is unicellular.
•There body consist of long,slender thread-like structure called as hyphae,the network of hyphae is
called mycelium.
•Coenocytic hyphae-Hyphae that has continuous tubes filled with multinucleated cytoplasm
•Some hyphae has septa or cross walls
•Some are saprophytes ,but some are dependent on living plants and animals (parasite) and some
members are also found in symbiotic relationship for example lichen (Algae+Fungi) and
mycorrhiza(Roots of higher plants like cycas+Fungi).
Reproduction
Phycomycetes
Mucor
•Habitat-Aquatic habitat and decaying wood or as obligate parasites on plant
•Mycelium-Aseptate and coenocytic
•Reproduction-
(i) Asexually -By endogenously produced zoospores (motile) or alpanospores.
(ii) Sexually -Zygospore is formed by fusion of two gametes.
Example-Mucor and Albugo(parasitic fungi on mustard).
Ascomycetes (sac fungi)
•Habitat-Coprophilous(growing on dung) , saprophytes decomposers or parasitic.
•Mycelium-Multicellular ,rarely unicellular, branched and septate.
Reproduction-
(i) Asexually -Conidia,produced exogenouslyAspergillus.
(ii) Sexually -Ascospores produces in asci,these asci are arranged in different types of fruiting bodies
called ascocarp.
Example - Neurospora (extensively used in biochemistry and genetics), truffles(edible) and Penicillium
•Habitat- Grow in soil,on log and tress stumps or as parasites (rust and smuts).
•Mycelium-Branched and septate
•Reproduction- Agaricus
(i) Vegetatively- Fragmentation
(ii) Asexually -Generally not found
(iii) Sexually - Sexual spores are basidiospores formed on basidium inside basidiocarps .Sex
organ absent
Example- Ustilago,Puffballs and Puccinia
Obligate Nucleoprotein
parasite structure Tobacco Mosaic Virus
Bacteriophage
T.O. Diener ds DNA
Free low molecular weight SSRNA
Viroids No protein
Disease in plant- Potato spindle tuber disease
BCr-Jacob disease
Mad cow disease
Classification
Natural Phylogenetic
Artificial
•Given by Linneaus.
•Based on natural affinities •Given by George Bentham •Based on evolutionary
among the organisms and Joseph Dalton Hooker. relationship between the
•Based mainly on Vegetative •Based on natural affinities various oraganism
character or on the androecium among organisms and •This assumes that
structure consider both external and organisms belonging to
internal features like the same taxa have a
Demerits ultrastructure, anatomy, common ancestor
•Separated closely related species embryology,phytochemistry
as they were based on a few
characteristics
•It gave equal weightage to
vegetative and sexual
characters.This is not acceptable
because vegetative characters are
more easily affected by
environment Taxonomy
•Carried out using computer •Based on cytological •It is based on the chemical
and is based on all observable information like chromosome constituents of the plant
characteristics number , structure and
•Number and codes are behaviour.
assigned to all the characters
and the data are then
proceed.
Plant Kingdom
Algae
•Algae are chlorophyll -bearing,simple,thalloid, autotrophic and largely aquatic (both freshwater and
marine ) organism
•The form and size of algae is highly variable, ranging from colonial (Volvox) to filamentous
(spirogyra)
Reproduction -
•Vegetative-Fragmentation
•Asexual - Production of different types of spores (mainly zoospores) .They are flagellated (motile) and
germinate to give rise to new plant
•Sexual-Takes place through fusion of two gametes
(i)Isogamous- Gametes are similar in size they can be flagellated (Ulothrix) and Non-flagellated gametes
(Spirogyra)
(ii)Anisogamy - Gametes dissimilar in size (Eudorina)
(iii)Oogamous-Fusion between one large non-motile female gamete and smaller motile male gamete
(Volvox).
Economic importance -
•At least a half of the total carbon dioxide fixation on earth is carried out by Algae
•Being photosynthetic they increase the level of dissolved oxygen in their immediate environment
•They are primary producer of energy-rich compound which form the basis of food cycles of all aquatic
animals
•70 species of marine algae are used as food like Porphyra ,Laminaria and Sargassum
•Hydrocolloids like algin (brown algae) and carrageen(red algae) are used commercially
•Agar obtained from Gelidium and Gracilaria are used to grow microbes and in preparation of ice-cream
•Chlorella are rich in protein and used as food supplements even by space travellers
Algae
•Commonly called green algae because grass green due to dominance of pigment chlorophyll a and b
•Plant body may be unicellular, colonial or filamentous
•Chloroplast may be discoid,plat -like , reticulate,cup-shaped ,spiral or ribbon-shaped in different
species
•Storage body - pyrenoids . Pyrenoids contain protein besides starch, also store food as oil droplets
•They have rigid cell wall of an inner layer of cellulose and an outer layer of pectose.
Reproduction -
•Vegetative-Fragmentation
•Asexual-Flagellated zoospores produced in zoosporangia
•Sexual-May be Isogamous, Anisogamous,Oogamous Ulothrix
Example -Volvox,chara, Spirogyra etc.
Volvox
Phaeophyceae
•Commonly called brown algae and found mainly in marine habitat
•They can be simple branched, filamentous form (Ectocarpus) to profusely branched forms as
kelps(can grow a height of 100meters)
•Pigments-Chlorophyll a,c, carotenoids and xanthophylls
•Vary in colour from olive green to various shades of brown depending upon the amount of
xanthophylls ,fucoxanthin present in them.
•Storage body-Laminarin or mannitol (from of complex carbohydrates)
•Cellulosic cell wall covered by algin
•Plant body has -
(i)Holdfast -help plant to get attached to the substratum
(ii)Stipe-Stalk
(iii)Frond-leaf like photosynthetic organ
Reproduction -
•Vegetative-Fragmentation
•Asexual-Pyriform (Pear-shaped )biflagellate zoospores and have two unequal laterally attached
flagella
•Sexual- May be Isogamous, Anisogamous,Oogamous,Union may take place in water or in oogonium
Gametes are pyriform and bear two laterally attached flagella
Example-Ectocarpus, Laminaria and Fucus
Rhodophyceae
•Commonly called red algae because the predominance of the red pigment,r-phycoerythrin in
their body
•Majority are found in marine habitat with greater concentration found in the warmer areas
•Occur in both well-lighted region close to the surface of water and also in great depths of Ocean
where relatively little light penetrates
•Thalli of most red algae are multicellular
•Food storage as floridean starch (very similar to amylopectin and glycogen in structure)
Reproduction-
•Vegetative-Fragmentation
•Asexual-Non-motile spores
•Sexual-Non-motile spores gametes (Oogamous),
accompanied by complex post fertilization development
Example-Gracilaria, Porphyra Polysiphonia Porphyra
Bryophytes
•Also known as amphibians of plant kingdom because these plants can live in soil but are dependent on
water for sexual reproduction
•Commonly grow in moist shaded areas in the hills
•It has thallus-like and prostrate or erect ,and attached to the substratum by unicellular or
multicellular rhizoids
•Lack true roots,stem or leaves but may possess root -like,leaf-like or stem -like structure
•Main plant body of the bryophytes is haploid (gametophyte)
•Sex organs are multicellular
Male- Antheridium, produce biflagellted antherozoids
Female- Archegonium, produces a single cell
•Antherozoids are released into water where they come in contact with archegonium , and they fuses
together to form zygote
•Zygote do not undergo reduction division immediately,they produce a multicellular body
sporophyte.Some cells of the sporophyte undergoes meiosis to produce haploid spores these spores
germinate to produce gametophyte.
Sporophyte - Not free living but attached to the photosynthetic gametophyte derives nourishment
from it
Economic importance -
•Species of Sphagnum provide peat used as fuel and as packing material for trans-shipment of living
material as they hold water
•Mosses (along with lichens) are of great ecological importance,they decompose rocks making substrate
suitable for growth of higher plants .Plays an important role in plant succession on bare rocks /soil
•Help in preventing soil erosion as they form a dense mat on soil
Bryophytes
Liverworts
Mosses
Liverworts
•Usually grow in moist,shady habitats, such as banks of streams, marshy ground,damp soil,bark
soil,bark of trees and deep in the woods
•Plant body of a liverworts is thalloid,thallus is dorsoventral and closely appressed to the substrate.
•Leafy members have tiny leaf like appendages in two rows on the stem-like structure
Reproduction-
•Asexual - (i) Fragmentation of thalli
(ii) Formation of specialised structure called gemma
Gemma get detached from the parent body and germinate to new individual
Gemma-Green , multicellular, asexual buds, which develops in small receptacles called Gemma cup
located on the thalli
•Sexual - Male and female sex organ are produced either on the same or on different thalli
•Sporophyte is differentiated into feet ,seta and capsule.After meiosis,spores are produced within the
capsule and spores germinate to form free-living gametophytes.
Example -Marchantia
Female Male
Marchantia Marchantia
Mosses
•Predominant stage of the life cycle of moss is gametophytes which consists of two stages -
(i) Protonema- Develops directly from a spores.It is a creeping,green, branched and frequently
filamentous stage
(ii) Leafy stage -Develops from secondary Protonema- as a lateral bud, consists of upright, slender
axes bearing spirally arranged leaves and they get attached to the soil through multicellular and
branched rhizoids.This stages bears sex organ
Reproduction -
•Vegetative- Fragmentation and budding in the secondary Protonema
•Sexual-Sex organ antheridia and archegonia are produced at the apex of the leafy shoots.After
fertilization,the zygote Develops into sporophyte, consisting of a foot,seta and capsule .The sporophyte
and spore dispersal mechanism are more elaborate than in liverworts
Example -Funaria and Sphagnum
Pteridophytes (Snakes of plant kingdom) Fern
•Evolutionary,they are the first terrestrial plant with vascular tissues
•Found in cool,damp,shady places though some may flourish well in Sandy -soil condition
•Main plant body is sporophyte (2n),with true root,stem and leaves,all these organs possess well-
differentiated vascular tissues
Meiosis
Sporangia Sporemother cel l Spores
(2n) (2n) (n)
•Spores germinate to give rise to inconspicuous,small but multicellular, free-living, mostly photosynthetic
thalloid gametophytes called prothallus (required cool, damp, shady places to grow)
•Because of this specific requirement and the need of water for fertilization the living pteridophytes is
limited and narrow to geographical regions.
•Gametophytes bear sex organs
Male-Antheridia
Female-Archegonia
•As told earlier water is required for fertilization and fusion of male gamete with egg present in the
archegonium result in the formation of zygote
•Zygote thereafter produces a multicellular well-differentiated sporophyte which is the dominant phase of
pteridophytes.
•Majority are homosporous but genera like Selaginella and Salvinia are heterosporous
Homosporous-Spores are of similar kinds
Heterosporous-Spores are of two type
(i) Macrospores (large)
(ii) Microspores (small)
•Macrospores and Microspores germinate and give rise to female and male gametophytes and female
gametophytes are retained on the parent sporophyte, zygote develops into young embryos within female
gametophytes .This event is a precursor to seed habit consider an important step in evolution
Economic importance -
•Used as medical purpose
•Soil - binders
•Frequently grown as ornamental
Pteridophytes
•Gymnosperms includes medium- sized trees or tall tress and shrubs (The giant redwood tree Sequoia is one of
the tallest tree species)
•Plants in which the ovules are not enclosed by any ovary wall and remain exposed,both before and after
fertilization,seed that develop post- fertilization are also not covered (naked )
•Roots are generally tap roots,some genera have fungal association in the form of mycorrhiza (Pinus) while
some (Cycas) specialised roots called coralloid roots are associated with nitrogen fixation Cyanobacteria.
•Leaves may be simple or compound,In cycas the pinnate Leaves persist for a few years
•Stems are unbranched(Cycas) or branched (Pinus)
•Needle - like leaves to reduce surface area,thick cuticle and sunken stomata to reduce water loss these
types of well-adaptation of leaves have been seen in gymnosperms that make them withstand extreme
temperatures, humidity and wind
. Two kinds of (microspores and megaspore) are produced within sporangia . that
are borne on sporophylls which are arranged spirally along an axis
. to form cones
Sporophylls
Pi n u s
Microsporophylls. Megasporophylls
Sporangia
4 Megaspore
One develops into Female gametophytes (n)
Gymnosperm Trees
Monoecious Dioecious
•Male and female gametophytes do not have an independent free living existence
•Pollen grains are carried by air current and come in contact with opening of Ovule
•Fertillisation is by pollen- tube formation which carries male gametes
•Zygote forms embryo and ovules are naked seeds
Ginkgo
(Living fossil)
Animal Kingdom
Basis of Classification
•Cell are •Cells performing •Tissues are grouped •Organ are associated
arranged the same function together to form oragns, to form functional
as loose cell are arranged into each specialised for a systems,each system
aggregates. tissues particular function concerned with a specific
Example-sponges Example-Coelenterates Example-Platyhelminthes physiological function
(Annelida to Chordates)
Example-Molluscs
•All members of Annelida are multicellular ,all of them do not exihibit the same patterns of organisation
of cells .
Digestive System
Symmetry
Scattered
pouches of
mesoderm
Segmentation
•Metamerism- The phenomena of dividing body externally and internally into segments with a serial
repetition of at least some organs.Example- Earthworm
Notochord
•Notochord is a mesodermally derived rod-like structure formed on the dorsal side during embroyonic
development
Notochord
Chordates Non-Chordates
•Animals having a notochord •Animals which do not form
Level of notochord
Kingdom organisation Symmetry Coelom Phylum
Cellular level Porifera
Coelenterata
Radial Ctenophora
Animalia
(multicellular) Without Body cavity Plathyhelminthes
(acoelomates)
Tissue/Oragn/ With false coelom Aschelminthes
Oargan system (Pseudocoelomates) Annelida
Bilateral
Arthropoda
With true coelom Mollusca
(coelomates) Echinodermata
Hemichordata
Chordata
Porifera (Sponges)
•Symmetry-Mostly asymmetrical
•Habitat and Habit-All are aquatic ,generally marine but few are found in freah water also.They are
sessile,solitary or colonial
•Body organisation-cellular level
•Body wall-Diploblastic Large holes (Osculum)
•Digestion-Intracellular digestion ,digestive system absent Exit
•Respiratory system- Cell surface
•Sexuality-Hermaphrodite
•Skeleton-Made up of spicules(calcium carbonate or siliceous) or spongin fibres
•Reproduction- Many minute pores
(i)Asexual-Fragmentation
(ii)Sexual-Formation of gametes (Ostia) ,Enter
•Fertilization-Internal Sycon(Scypha)
•Development-Indirect,larva morphologically distinct from adult
Unique features-
•They have water canal system ,water enter through minute pores (ostia) in the body wall into central
cavity (spongocoel) from where water exits through large hole osculum and in central cavity
choanocytes /collar cells line the spongocoel
Function of water canal system
Unique features-
•Cnidoblasts cells have stinging capsules called nematocysts present in tentacles and body
•They exhibit two basic body form called polyp and medusa
Polp-Sessile and Cylindrical like Adamsia
•Symmetry-Radially symmetry
•Habitat and habit -Exclusively marine ,free-living
•Body organisation - Tissue level
•Body wall-Diploblastic
•Digestive system /Digestion-Extracellular and intra cellular digestion
Pleurobrachia
•Sexuality-Hermaphrodites
•Reproduction -Only sexual
•Fertilisation-External
•Development-Indirect development
Unique features
.They emit light (Bioluminescence)
•They exhibit
•Body bear 8 external rows of ciliated comb plates
Unique features
•Body is dorsoventrally flattened ,thats why they are called flatworm
•First ones with bilateral symmetry
•Have specialized cells called flame cells help in osmoregulation and excretion
Taenia Fasciola
•Symmetry-Bilateral symmetry
•Habitat/Habit-Aquatic,terrestrial ,parasitic in plants and animals
•Body organisation-Organ system
•Body wall-Triploblastic
•Digestive system/ digestion-Complete alimentary canal with muscular pharynx ,extracellular digestion
•Coelom-Pseudocoelomate
•Excretory system-Excretory tube open out through excretory pore
•Sexuality-Bisexual
(i)Females are longer than males
(ii)Posterior end curved in males
Ascaris
(Round worm)
Posterior end
curved in male
Male Female
•Fertilization-Internal
•Development-Indirect/direct
Unique features
•Circular in cross-section
•First ones with complete alimentary canal
Example-Wucheria(Filaria worm)
Ancylostoma(Hookworm)
•Symmetry-Bilateral symmetry
•Habit and Habitat-Aquatic and terrestrial
•Body division/appearance- Distinct segment metameres / annuli
•Body organisation- Organ-level
•Body wall-Triploblastic
•Coelom-Body cavity is true coelom
•Circulatory system-Closed
•Excretory system-Nephridia help in osmoregulation and excretion
•Locomotory structure-
(i)Longitudinal and circular muscles
(ii) Parapodia/lateral appendages in some
Nereis
Parapodia
Unique features
•First ones with metameric segmentation and true coelom
•First one with metamerism
Hirudinaria
(Blood sucking Leech)
Pheretima
(Earthworm)
Arthropoda
•Symmetry-Bilateral symmetry
•Habitat and Habit-Aquatic and terrestrial
•Body division/appearance- Head ,thorax abdomen
•Body organisation-Organ -level
•Body wall-Triploblastic
•Coelom-Body cavity is true
•Locomotory structure-Jointed appendages
•Respiratory system-Respiratory organs are gills,book gills,tracheal system,book lungs
•Circulatory system -Open
•Excretory system -Takes place through Malpighian tubes
•Sense organ -Eyes(simple,compound),antennae,Statocyst(for balancing)
•Sexuality-Mostly dioecious
•Fertilization-Usually internal
•Development-Direct/indirect
Butterfly
Unique features
•Econimically important insects
Apis(Honey bee)
Bombyx(Silkworm)
Laccifer(Lac insect)
•Vectors-Anopheles,Culex and
Ades(Mosquitoes)
•Gregarious pets-Locusta(Locust)
Scropion Prawn
Mollusca
•Symmetry-Bilateral symmetry
•Habit and Habitat-Mostly aquatic but some are terrestrial Body
division-Head,muscular foot ,visceral hump
•Body organisation-Organ-system
•Body wall - Triploblastic
•Coelom-True coelom
•Skeleton-Calcareous shells (Exoskeleton)
Pila(Apple snail)
Octopus(Devilfish)
•Symmetry-Adult echinoderms are radially symmetrical but larvae are bilaterally symmetrical
•Habitat-Exclusively marine
•Body appearance-Star like
•Body wall-Triploblastic
•Body organisation -Organ-level system
•Coelom-True Coelom
•Digestive system-
Mouth - lower side/ventral
Spines
Anus-upper side/ dorsal
•Skeleton- Spines
•Locomotory-Water vascular system Asterias
•Respiratory system-Water vascular system (Star fish)
•Circulatory system-Open
•Excretory system-Absent
•Sexuality-Dioecious
•Fertilization-Usually external
•Development-Indirect with free swimming larva
Unique features-
•Presence of water vascular system
Ophiura(Brittle-star)
Hemichordata
•Symmetry-Bilateral symmetry
•Habitat-Exclusively marine
•Body organisation - Organ-system
•Body appearance division-Worm -like cylindrical body and Proboscis ,collar,trunk
Unique features
•Presence of rudimentary structure in the collar region called stomochord(structure similar to
notochord)
•Earlier considered as subphylum under phylum Chordata but now placed as separate phylum under
non-chordata
Example-Saccoglossus
Chordata
•Symmetry-Bilateral symmetry
•Body wall-Triploblastic
•Body organisation-Organ system
•Coelom-True coelom
•Circulatory system-closed
Unique feature
•Presence of notochord ,a dorsal hollow nerve cord and paired pharyngeal gill slits
•Possess a post anal tail
Chordata characteristics
Tail
Mouth
Digestive tube
Trunk
Protochordates
•All vertebrates are chordates but all chordates are not vertebrates
Cyclostomata
•Habitat-Marine
•Habit-Ectoparasite on fishes
•Temperature regulation -No(Poikilotherm )
•Skeleton-Scales are absent and cartilaginous cranium and vertebral column
•Digestive system-Circular and sucking mouth without jaws
•Respiratory system-6-15 pairs of gills slits
•Circulatory system-Closed
•Excretory system-Kidneys
•Reproductive system-They migrates to fresh water for spawning and after spawning the adult dies with
few days
•Development-Indirect and larvae return to ocean after metamorphosis
Unique feature
• Unpaires fins
Chondrichtyes
•Habitat- Marine
•Habit Predaceous
•Temperature regulation-Poikilotherm (Cold blooded)
•Skeleton- Placoid scales for tough skin (Exoskeleton) and Cartilaginous (Endoskeleton)
•Digestive system-Ventral mouth ,teeth are modified scales(backward directed) and powerful jaws
•Respiratory system - Gill slits without operculum
•Circulatory system-2 chambered heart with 1 auricle and 1 ventricle
•Excretory system-Kidney
•Sense organ (i) Eye absent
(ii)Ear- Tympanum absent
•Fertilisation-Internal
•Development-Direct Scoliodon(Dog fish)
Unique feature-
•Streamlined body
•Notochord persists throughtout life
Pristis(Saw fish)
•Male pelvic fins bear claspers
•Absence of air bladder hence swim continuously to avoid
sinking •Many are viviparous
Amphibia
Unique feature
•Body divided into head and trunk ,tail in some e.g. Salamander
•They are oviparous
Example-Bufo(Toad)
Rana
Hyla(Tree frog)
Ichthyophis(Limbless amphibia)
Unique feature
•Forelimbs modified into wings Psittacula(Parrot)
•Hindlimbs of birds are modified for walking ,swimming,or clasping the tree branches Pavo(Peacock)
•Skin is dry without glands except oil gland at the base of tail Example-
Aptenodytes(Penguin)
Mammalia
•Habitat-Terrestrial and aquatic
•Habit-Limbs adapted to fly and live in water
•Temperature regulation-Homeotherms(Warm blooded) Pteropus
•Skeleton-Bony endoskeleton Macropus (Flying fox)
•Digestive system-Different types of teeth in the jaws (Kangaroo)
•Respiratory system-Lungs
•Circulatory system 4 chambered heart with 2 auricles and 2 ventricles Balaenoptera
•Sense organ- Eyes with eyelids and external ear / pinna present (Blue whale )
•Fertilisation-Internal
•Development-Direct
Unique feature
•Presence of mammary glands to nourish young ones
•All are viviparous except egg laying Platypus
Example-Felis(Cat),Panthera leo(Lion)
Morphology of
Flowering Plant
Plant Morphology
•Branches of science which deals with deals with the study of external
form,structure and various modification of plants
•Flowering plant body is differentiated into root system(underground
part) and aerial system(portion above the ground)
Root
•Roots are achlorophyllous and underground part of plants
•Elongated of radicle from primary root
•Primary root bears lateral root of several orders that are referred
to as secondary,tertiary etc roots
Types of root
(Primary root)
(Zone of cell
division)
Stem
•Develops from the plumule of the embryo of a germinating seed
•It bear nodes and internodes
Node-Region of the stem where leaves are born
Internode-Portion between two nodes
•Bear buds which can be terminal or axillary
•Stem are generally green when young but after maturation they become woody and
dark brown
Internode
Node
Function of stem
Venation
•The arrangement of veins and veinlet in the lamina of leaf is termed as venation
•Midrib-A middle prominent vein
Venation
Reticulate Parallel
•Veinlets from a network •Veins runs parallel to
•Found in dicotyledons each other within lamina
•Found in most monocots
Midrib
Monstera deliciosa
leaf
Pinnately compound leaf Palmately compound leaf
Simple leaf
•When its lamina is entire or when incised ,the incision do not touch the midrib .
Mango leaf
Compond leaf
•When the incisions of the lamina reach up to the midrib breaking it into a number of leaflets
Neem
•The leaflets are attached at a common point i.e. at the tip of petiole
Silk cotton
Phyllotaxy
•Pattern of arrangement of leaves on the stem or branch.
Phyllotaxy
Inflorescence
Racemose Cymose
•Main axis continues to grow •Main axis terminates
•Flower borne laterally in into a flower (limited
acropetally succession growth)
•Flower borne in
basipetally succession
Young flower
Flower
Gamosepalous Polysepalous
•Sepals united •Sepals free
Gamopetalous Polypetalous
•Petals united •Petals free
Aestivation
•The mode of arrnagement of sepals or petals in thr floral bud with respect to the other members of
the same whorl
Wings
Keel
•Each anther is usually bilobed and each lobe has two chamber,called pollen sacs
•Pollen grains are produced in pollen sacs
•Staminode-Sterile stamens
•Stamens of flower may be united with other members such as petals or among themselves
•There may be a variation in the length of filaments within a flower.Example-Salvia and Mustard
Important terms-
•Epipetalous-When stamens are attached to the petals.Example-Brinjal
•Epiphyllous-When stamens are attached to the perianth .Example-Lily
•Polyandrous-When stamens in a flower are free
•Monoadelphous-Stamens may be united into one bunch or one bundle.Example-China rose
•Diadelphous-Stamens may be united into two bundle.Example-Pea
•Polydelphous-Stamens may be united into more than two bundles.Example-Citrus
Gynoecium
Carpel
Placentation
(The arrangement of ovules whithin the ovary )
Example yaad
rakhana
Fruit
Ripped into
Ovary Fruit
Important terms-
•Parthenocarpic fruit- Fruit is formed without fertilisation of ovary
•Drupe fruit-Developed from monocarpellary superior ovaries and are one seeded
Example-Mango pericarp is well differentiated into an outer thin epicarp ,a middle fleshy edible
mesocarp and inner stony hard endocarp.Coconut is also a drupe , the mesocarp is fibrous
Seed
Ovule
(After fertilisation)
Into seed
Testa Tegmen
Radicle One/two Embryonal
(Outer layer) (Inner layer)
cotyledons axis
Structure of Dicotyledonous seed
•The hilum is a scar on the seed coat throught which the developing seed were attached to the fruit
•Micropyle-Small pore above hilum
•Embryo consist of an embryonal axis and two cotyledons
•Cotyledons are often fleshy and full of reserve food material
•At the two ends of the embryonal axis are present the radicle and plumule
•Endospermic seed-The seed in which endosperm ( food storing tissue) is present ,endosperm is formed
as a result of double fertilisation Example-Castor
•Non-endospermic seed-Endosperm is not present in mature seed.Example-Bean,gram and pea
Structure of Monoctyledonous seed
Characters Solanaceae
Stem Herbaceous rarely wood,aerial,erect,cylindrical,branched,solid or hollow,hairy or
glabrous , underground stem in potato(Solanu, tuberosum)
Leaves Alternate,simple,rarely pinnately compound ,exstipulate;venation reticulate
Distibution Tropics,subtropics and even temperate zone
Inflorescence Solitary,axillary or cymose as in Solanum
Flower Bisexual,actinomorphic
Calyx Setals five ,united, persistent,valvate aestivation
Corolla Petals five,united,valvate aestivation
Androecium Stamens five,epipetalous
Gynoecium Bicarpellary obligated placed ,syncarpous,ovarysuperior ,bilocular ,placenta
swollen with many ovules,axile
Fruits Berry and capsule
Seeds Many,endospermous
Floral formula
Economic Many plants belonging to this family are source of food
impotance (tomato,brinjal,potato),spies(chilli),medicine(belladonna,ashwagandha);
fumigatory(tabacco),Ornamental(petunia)
Anatomy of Flowering
plants
Anatomy
•Study of internal structure of any organisms (Papa of plant anatomy-Nehemiah Grew)
Tissue system
Group of tissues derived from a portion of meristem that performs a similar function in the plant body
irrespective of its position,these tissue form a tissue system
•On the basis of their structure and location there are three types of tissue system-Epidermal tissue
system, Ground tissue system and vascular tissue system
from soil
Trichomes-Epidermal hair on stem, usually multicellular.May be branched or unbranched and
soft or stiff,may even be secretory.Helps in preventing water loss dur to tranpiration
Ground All tissue except epidermis and vascular bundles constitute the ground tissue
tissue system Consist of simple tissue such as parenchyma,collenchyma and sclerenchyma
sarenchymatous cells are usually present in rays, in primary stems and root
cortex,pericycle,pith and medullary In leaves Ground tissue consists of thin-
walled chloroplast containing cells called mesophyll
Vascular
Presence /absent
tissue Open-Cambium present.possess the ability to form secondary xylem
of cambiun
system and phloem e.g. Dicot stem
Closed-Cambium absent,do not form secondary xylem and phloem
e.g.Monocot stem
Arrangement of
Radial-Xylem and phloem within a vascular bundle are arranged in
xylem and
an alternate manner along different radii e.g.root
phloem
Conjoint-Xylem and phloem are jointly situated along the same
radius e,g,stem and leaves
Orchidaceae is the largest Compositae is the largest
family in dicot family in dicot
Features
Dicot stem Monocot stem
Epidermis Outermost protective layer , covered Outermost protective layer , covered with
with a thin layer of cuticle it may bear a thin layer of cuticle it may bear
trichomes and a few stomata trichomes and a few stomata
Hypodermis Few layers of collenchymatous cells just
below the epidermis,provide mechanical Sclerenchymatous
strength of the young stem
Cortex
•Tissue-A group of similar cells along with intercellular substance substance perform a specific function.
•All complex animal consist of only 4 basic types of tissue and the classification of tissue is based on -
Structure of cells and Function performed by cells
Tissue
•Division of labour-Cells,tissue,organ and organ system split up the work in a way that exhibits division of
labour and contribute to the survival of the body as a whole
•Each organ in our body is made of one or more types of tissue.For example-Heart consists of all 4 types
of tissues
•Organ system organisation is essential for more efficient and better coordinated activities of billions of
cells constituting an organism
•Evolutionary trend-Complexity in organ and organ system displays certain discernable trend
Frog
•Phylum-Chordata
•Class-Amphibia
•Scientific name-Rana tigrina(Common species of frog found in India)
•Habitat-Fresh water and land
•Habit-Poikilotherms,Ability to change the colour to hide them from enemies(Camouflage) this colour
protection called mimicry,aestivation(summer sleep),hibernation(winter sleep)
Morphology
Digestive system
O2
CO
2
Vena cava(Receives blood)
Circulatory system
Atria
•Well-developed closed type
•Blood vascular system involves heart,blood vessels and blood Ventricle
•Heart is muscular structure situated in upper part of body cavity
•A triangular structure called sinus venosus joins the right atrium
•Ventricle opens into a sac like conus arteriosus on ventral side of Pericardium
heart (Covering
•Blood from heart is carried to all parts of body by arteries (arterial membrane)
system)
•Veins collect blood from different parts of body to heart and for venous system
•Blood composed of plasma and cells and the blood cells are RBC(red blood cell) or erythrocytes(WBC)
or leucocytes and plates
•RBC's are nucleated and contain red colored pigment called hemoglobin
•Blood carries nutrients,gases and water to respective sites during circulation
•Circulation of blood is achieved by pumping action of muscular heart
Portal system
Forebrain
Midbrain Hind-brain
•Includes olfactory
•Characterised by a pair of •Consists cerebellum and
lobes,paired cerebral
optic lobes medulla oblongata
hemispheres and unpaired
•Medulla oblongata passes out
diencephalon
through the foramen
magnum and continues into
spinal cord which enclosed in
vertebral column
Economic importance
•Frogs are beneficial for mankind because they eat insect and protect the crop
•Maintain ecological balance because these serve as an important link of food chain and food web
in ecosystem
•In some counties the muscular legs of frog are used as food by man
Reproductive system
Male
Pathway of sperm
Testis
Vasa efferentia
Bidder's canal
Urinogenital duct
Cloaca
Cloacal aperture
Testis
Pair of yellowish ovoid testes which are found adhered to upper part of kidney by a double
fold of peritoneum called mesorchium
Vasa efferentia
•10-12 in number that arise from testes
•Enter in kidney on their side and open into Bidder's canal,then finally communicates with
urinogenital duct that comes out of kidney and open into cloaca
Cloaca
Small,medium chamber that is used to pass faecal matter,urine and sperm to exterior
Female
Pathway of ova
Ovaries
Oviduct
Cloaca
Cloacal aperture
•Ureter
A mature female can lay 2500 to 3000 ova at a time
•Fertilisation is external and takes place in water
•Development involves a larval stage called tadpole
•Tadpole undergoes metamorphosis to from adult
Ovary
A pairs of ovaries are situated near kidney and there is no functional connection with
kidney
Oviduct
pair of oviduct arising from ovaries open into cloaca separately
Cell
Cell
•Cell is the fundamental structure and functional unit of all living organisms
•Anything less than a complete structure of a cell does not ensure independent living
•Anton Von Leeuwenhoek first saw and described a live cell and Robert Brown later discovered the nucleus
•Invention of microscope and its improvement leading to electron microscope revealed all the structural
details of cell
Cell Theory
•In 1838 Matthias Schleiden,a German botanist,examined a large number of plants and observed that
all plants are composed of different kinds of cells which form tissues of plants
•At same time,Theodore Schwann (1839) ,a British Zoologist,studied different types of animals cells and
reported that cells had a thin outer layer which is today known as Plasma membrane,he also concluded
based on his studies on plant tissues that presence of cell wall is a unique character of the plant cells ,
on basis of this Schwann proposed hypothesis that bodies of animals and plants are composed of cells
and products of cells
•Schleiden and Schwann together formulated the cell theory,but this theory did not explains as to how
new cells were formed
•Rudolf Virchow (1855) first explained that cells divided and new cells are formed from pre-existing cells
(Omnis cellula-e-cellula)
•He modified the hypothesis of Schleiden and Schwann to give final cell theory -
1)all living organisms are composed of cells and products of cells
2)all cells arise from pre-existing cells
An Overview of Cell
•Cells differ greatly in size,shape and activities,like Mycoplasma(0.3µm)
smallest cell while largest isolated single cell is egg of an ostrich and
nerve cells are some of the largest cells
•Cells also vary greatly in their shape ,they may be disc-
like,polygonal,columnar,cuboid,thread-like or even irregular ,the shape of
cell vary according to function they perform
•Semi-fluid matrix called cytoplasm occupies the volume of the
cell,present in both prokaryotic and eukaryotic cells,cytoplasm is the
main arena of cellular activities in both the plant and animal cells
various chemical reactions occur in it to keep cell in the 'living state'
•Inside each cell is a dense membrane bound structure called nucleus,this
nucleus contain chromosomes which in turn contain genetic material,DNA
•Cell that have membrane bound nucleus are called eukaryotic whereas
cells that lack a membrane bound nucleus are prokaryotic
•
Eukaryotic cells have other
•Study membrane
of internal bound distinct
structure structures called organelles
of any organisms
Prokaryotic
Epidermal tissue system (Outer cellsof the whole plant body)
most covering
Based on shape
Epidermis •Outermost covering of primary plant body,elongated,compactly arranged
r parenchymatous cells,which from a continous layer
Bacillus Coccus Vibrio Spirillum
Rod-like Spherical Comma shaped Spiral
Stomata •Present in the epidermis of leaves,regulate the process of transpiration and
•Organisation of prokaryotic cell is fundamental similar even
gaseous exchange
though prokaryotes exhibit
•Cells with smalla wide
amountvariety of shapes lining
of cytoplasm and functions
the cell wallcells
andwhich
a large vacuoleopening and
•Composed of 2 bean-shaped cells,called guard regulate
•All prokaryotes have awith
•Covered cellawall
waxysurrounding
thickpore
layer the cell membranein roots)
of cuticle(Absent
closing stomatal ,possess chloroplast
except in mycoplasma
•Few epidermal cells,in the vicinity of the guard cells become specialised in their
•There is no well-defined nucleus ,the genetic material is basically
shape and size,known as subsidiary cells
naked not enveloped by a nuclear membrane
•Stomatal apparatus= stomatal aperture+guard cells+subsidiary cells
•In addition to genomic DNA (the single chromosome/circular
Root hairs •Unicellualar elongation of the epidermal cells and help absorb water and mineral
DNA) ,many bacteria have small circular DNA outside the genomic
from soil
Tissue system
•All tissue except epidermis and vascular bundles constitute the ground tissue
Ground •Consist of simple tissue such as parechyma,collenchyma and sclerenchyma s
tissue •Parenchymatous cells are usually present in cortex,pericycle,pith and medullary
system rays, in primary stems and root
•In leavesGround tissue consists of thin-walled chloroplast containing cells called
mesophyll
•Open-Cambium present,possess the ability to form secondary
Vascular (Prsesence/absence xylem and phloem e.g.Dicot stem
Eukaryotic cells
tissue of cambium)
system •Closed-Cambium absent,do not form secondary xylem and phloem
•Eukaryotic cells possess an organised nucleus with astem
e.g.Monocot nuclear envelope,In addition eukaryotic cells have
(Consist of
variety of complex locomotory and cytoskeletal structures and their genetic material is organised into
xylem and (Arrangement
chromosomes
phloem) of xylem and •Radial-Xylem and phloem within a vascular bundle are
•All eukaryotic cells are not identical,they includes all protists,plants,animals and fungi
phloem) arranged in an alternate manner along different radii e.g.root
Plant cell-Possess cell wall,plastids and a large central vacuole absent in animal cells
Animal cell-Have centrioles which are absent in almost all plants cells
•Conjoint-Xylem and phloem are jointly situated along the same
radius e,g,stem and leaves
•Study of internal structure of any organisms
Anatomy
(Papa of plant anatomy-Nehemiah Grew)
Tissue system
•Group of tissues derived from a portion of meristem that performs a similar function in the plant body
irrespective of its position,these tissue form a tissue system
•On the basis of their structure and location there are three types of tissue system
Epidermal tissue system (Outer most covering of the whole plant body)
•All tissue except epidermis and vascular bundles constitute the ground tissue
Animal
Ground •Consist of simple tissue such as parechyma,collenchyma and sclerenchyma s
cell
tissue •Parenchymatous cells are usually present in cortex,pericycle,pith and medullary
system rays, in primary stems and root
•In leavesGround tissue consists of thin-walled chloroplast containing cells called
mesophyll
•Open-Cambium present,possess the ability to form secondary
Vascular (Prsesence/absence xylem and phloem e.g.Dicot stem
tissue of cambium)
system •Closed-Cambium absent,do not form secondary xylem and phloem
(Consist of e.g.Monocot stem
xylem and (Arrangement
phloem) of xylem and •Radial-Xylem and phloem within a vascular bundle are
phloem) arranged in an alternate manner along different radii e.g.root
Structure- •All tissue except epidermis and vascular bundles constitute the ground tissue
Ground •Consist ofof cell
simple tissue such
•Improved model of structure membrane wasasproposed
parechyma,collenchyma and sclerenchyma
by Singer and Nicolson(1972) widely s
tissue •Parenchymatous cells
accepted as fluid mosaic model,according to are
thisusually
model-present in cortex,pericycle,pith and medullary
system rays, in primary
The quasi-fluid of lipids enables lateralstems and root
movement of proteins within the overall bilayer ,this ability to
move within the membrane •In leavesGround
is measured tissue
as its consists
fluidity of thin-walled chloroplast containing cells called
Transport of moleculesmesophyll
across cell membrane-
•Membrane is selectively permeable to some •Open-Cambium present,possess
molecules present the of
on either side ability
it to form secondary
Vascular (Prsesence/absence
Passive transport-Molecules xylemacross
can move briefly and phloem e.g.Dicot
membrane stemany requirement of energy
without
Osmosis-tissue
Movement of cambium)
of water by diffuse,neutral solutes may move across the membrane by process of
system along concentration gradient( •Closed-Cambium absent,do not form secondary xylem and phloem
simple diffusion from higher concentration to lower) and water also move
(Consist of e.g.Monocot stem
across this membrane from higher to lower concentration
xylem and (Arrangement
Active transport-Few ions or molecules are transported across the membrane against their concentration
phloem)
gradient i,e, fromof xylem
lower to and •Radial-Xylem
higher concentration and phloem within
, such transportation a vascular
are energy bundleprocess
dependent are in
phloem)
which ATP is utilised arranged in an alternate manner along different radii e.g.root
Function-
•Most important functions of the plasma•Conjoint-Xylem
membrane is theand phloemof
transport aremolecules
jointly situated
across italong the same
•Fluid nature of membrane is also important radius e,g,stem
from and leaves
the point of view of functions like cell
growth,formation of intercellular junctions, secretion,endocytosis ,cell division etc.
Cell Wall •Study of internal structure of any organisms
Anatomy
(Papa of plant anatomy-Nehemiah Grew)
Tissue system
•Group of tissues derived from a portion of meristem that performs a similar function in the plant body
irrespective of its position,these tissue form a tissue system
•On the basis of their structure and location there are three types of tissue system
Epidermal tissue system (Outer most covering of the whole plant body)
•They consist of many flat,disc-shaped or cisternae of 0.5µm to 1.02 diameter and these are stacked
Trichomes•Epidermal
parallel to each other hair on stem,usually multicellular
•The Golgi cisternae are •May be branchedarranged
concentrically or unbranched
near theand soft or
nucleus stiff,may
with distincteven be secretory
convex cis or forming
face and concave trans •Helps in preventing
or maturing water
face and cisloss
anddue to transpiration
trans faces of organelle are entirely different
,but interconnected
•All tissue except epidermis and vascular bundles constitute the ground tissue
Ground is the
•Golgi apparatus important
•Consist site oftissue
of simple formation
such asofparechyma,collenchyma
glycoprotein and glycolipids
and sclerenchyma s
tissue •Parenchymatous cells are usually present in cortex,pericycle,pith and medullary
Function-system rays, in primary stems and root
•Golgi apparatus principally perform the function of packing materials,to delivered either to the
•In leavesGround tissue consists of thin-walled chloroplast containing cells called
inter-cellular targets or secreted
mesophyll
•Open-Cambium present,possess the ability to form secondary
Vascular (Prsesence/absence xylem and phloem e.g.Dicot stem
tissue of cambium)
system •Closed-Cambium absent,do not form secondary xylem and phloem
(Consist of e.g.Monocot stem
xylem and (Arrangement
phloem) of xylem and •Radial-Xylem and phloem within a vascular bundle are
phloem) arranged in an alternate manner along different radii e.g.root
•Typically it is sausage-shaped
Trichomes•Epidermal
•Each mitochondria hair on stem,usually
is a double membrane-bound multicellular
structure with outer membrane and inner membrane
•May beinto
dividing its lumen distinctly branched or unbranched
2 aqueous compartments andi.e.soft
i.e. orouter
stiff,may even be secretory
compartment and inner
compartment •Helps in preventing water loss due to transpiration
•Inner compartment is filled with a dense homogeneous substance called matrix
•All tissue except epidermis and vascular bundles constitute the ground tissue
•Outer membrane
Ground forms the continuous limiting boundary of organelle and inner membrane forms a
•Consist of simple tissue such as parechyma,collenchyma and sclerenchyma s
number tissue
of infoldings called cristae towards matrix,cristae increase surface area
•Parenchymatous cells are usually present in cortex,pericycle,pith and medullary
system rays, in primary stems and root
•In leavesGround tissue consists of thin-walled chloroplast containing cells called
mesophyll
•Open-Cambium present,possess the ability to form secondary
Vascular (Prsesence/absence xylem and phloem e.g.Dicot stem
tissue of cambium)
system •Closed-Cambium absent,do not form secondary xylem and phloem
(Consist of e.g.Monocot stem
xylem and (Arrangement
phloem) of xylem and •Radial-Xylem and phloem within a vascular bundle are
phloem) arranged in an alternate manner along different radii e.g.root
•Two membrane have their own specific enzymes associated with mitochondrial function
•They produce cellular energy in form of ATP,hence they are called 'power houses of cell'
•Conjoint-Xylem and phloem are jointly situated along the same
•Matrix also possess single circular DNA molecule,a few RNA molecules,ribosomes (70S) and components
radius e,g,stem and leaves
required for synthesis of proteins and they divide by fission
Plastids •Study of internal structure of any organisms
Anatomy
Chloroplasts (Papa of plant anatomy-Nehemiah Grew) Leucoplasts
Chromoplast
Tissue
•Contain system
chlorophyll •In chromoplasts fat •Colorless plastids
and carotenoids soluble carotenoid of varied shapes
•Group of tissues derived from a portion of meristem
pigments likethat performs a similar functionandin the plant body
pigments which are size with stored
irrespective of its position,these tissue form a tissue system
carotene,xanthophylls
responsible for nutrients
•On the basis of their structure and location there are three
and other are present types of tissue system •Cells wit
trapping light energy
essential for that gives part of the •Covered
Epidermal tissue system (Outer most covering of the whole plant body)
photosynthesis plant a yellow,orange
Epidermis •Outermost coveringand of primary
red colourplant body,elongated,compactly arranged
r parenchymatous cells,which from a continous layer
Amyloplasts Elaioplasts Aleuroplasts
•Store •Store oils •Store
Stomata carbohydrates and fats protein
(starch)
e.g.Potato
Root hairs •Unicellualar elongation of the epidermal cells and help absorb water and mineral
from soil
Tissue system
•All tissue except epidermis and vascular bundles constitute the ground tissue
Ground •Consist of simple tissue such as parechyma,collenchyma and sclerenchyma s
tissue •Parenchymatous cells are usually present in cortex,pericycle,pith and medullary
system rays, in primary stems and root
•In leavesGround tissue consists of thin-walled chloroplast
1)A number of organisedcontaining cellsincalled
2) Arranged stacks
mesophyll flattened membranous like piles of coins called
Space limited by inner •Open-Cambium sacs,present
present,possess the ability grana/intergranal
in stroma to form secondary
Vascular
membrane of (Prsesence/absence
chloroplast xylem and phloem e.g.Dicot stem thylakoids
tissue of cambium) Flat membranous tubules connecting the
3) Chlorophyll pigments
system •Closed-Cambium
thylakoids of differentabsent,do
grana not form secondary xylem and phloem
are present in them
(Consist of e.g.Monocot stem
xylem and (Arrangement
phloem) of xylem and •Radial-Xylem and phloem within a vascular bundle are
phloem) arranged in an alternate manner along different radii e.g.root
50S
Root hairs •Unicellualar elongation of the epidermal cells and help absorb water and mineral
from soil
Tissue system
•All tissue except epidermis and vascular bundles constitute the ground tissue
Ground •Consist of simple tissue such as parechyma,collenchyma and sclerenchyma s
tissue •Parenchymatous cells are usually present in cortex,pericycle,pith and medullary
system rays, in primary stems and root
•In leavesGround tissue consists of thin-walled chloroplast containing cells called
mesophyll
•Open-Cambium present,possess the ability to form secondary
Vascular (Prsesence/absence xylem and phloem e.g.Dicot stem
tissue of cambium)
system •Closed-Cambium absent,do not form secondary xylem and phloem
(Consist of e.g.Monocot stem
xylem and (Arrangement
phloem) of xylem and •Radial-Xylem and phloem within a vascular bundle are
phloem) arranged in an alternate manner along different radii e.g.root
Electron micrograph
•Conjoint-Xylem and phloem are jointly situated along the same
radius e,g,stem and leaves
•Study of internal structure of any organisms
•Centrosome is an organelle usually containing 2 cylindrical structures called centrioles and they are
surrounded by amorphous structures materials
•Both centrioles in a centrosome lie perpendicular to each other in which each has an organisation like
Anatomy
cartwheel and they are made up of 9 evenly spaced peripheral fibrils of tubulin protein,each of
(Papa of plant anatomy-Nehemiah Grew)
peripheral fibril is a triplet
Tissue triplets
•Adjacent system are also linked
•Central
•Group ofpart of the
tissues proximal
derived from region of centriole
a portion is also
of meristem proteinaceous
that and called
performs a similar hub,which
function in theisplant
connected
body
with tubulesofofits
irrespective peripheral triplets
position,these by radial
tissue form aspokes made of protein
tissue system
•Centriole form
•On the basis of basal
their body of cilia
structure andorlocation
flagellathere
and spindle fibres
are three typesthat give rise
of tissue to spindle apparatus
system
during cell division in animal cells
Epidermal tissue system (Outer most covering of the whole plant body)
Nucleus •All tissue except epidermis and vascular bundles constitute the ground tissue
Ground •Consist of simple tissue such as parechyma,collenchyma and sclerenchyma s
tissue •Parenchymatous cells are usuallymaterial
present of
in nucleus
cortex,pericycle,pith and dyes
medullary
•First described by Robert Brown as early as 1831,later stained by basic was
system rays, by
in primary
given the name chromatin Flemmingstems and root
•Loose and indistinct •In leavesGround
network tissue consists
of nucleoprotein fibres of thin-walled
called chromatinchloroplast containing cells called
mesophyll
•Interphase nucleus (nucleus of a cell when it is not dividing) has highly extended and elaborate
nucleoprotein fibres called chromatin,nuclear •Open-Cambium
matrix andpresent,possess the ability
one or more spherical to form
bodies secondary
called nucleoli
•Larger Vascular
and more(Prsesence/absence
numerous nucleoli are xylem
presentand
in phloem e.g.Dicot
cells actively stem out protein synthesis
carrying
•Nucleartissue
envelopeof,which
cambium)
consists of 2 parallel membranes with a space between (10 to 59 nm( called
system •Closed-Cambium absent,do not form secondary xylem and phloem
perinuclear space,from a barrier between the material present inside nucleus and cytoplasm
(Consist of e.g.Monocot stem
•At a number of placed nuclear envelope is interrupted by minute pores(Nuclear pore),which are formed
xylem and (Arrangement
by the fusion of its two membranes
phloem) of xylem and •Radial-Xylem and phloem within a vascular bundle are
phloem) arranged in an alternate manner along different radii e.g.root
Epidermal tissue system (Outer most covering of the whole plant body)
spherical •Outermost
•Nucleoli areEpidermis covering
structure present in of primary plant body,elongated,compactly arranged
nucleoplasm
•Content ofr nucleolus isparenchymatous
continuous with cells,which
the rest offrom a continous
nucleoplasm as itlayer
is not a membrane bound structure
•Cells with small amount of cytoplasm lining the cell wall and a large vacuole
•During different stages of cell division,cells show structured chromosomes in place of nucleus
•Covered with a waxy thick layer of cuticle(Absent in roots)
•Chromatin contains DNA and some basic proteins called histones ,some non-histone proteins also RNA
Stomata •Present
•Every chromosome(Visible in dividing
only in the epidermis
cells) of leaves,regulate
essentially the process
has a primary of transpiration
constriction and
or the centromere
on the side of which discgaseous
shapedexchange
structures called kinetochores
•Composed of 2 bean-shaped cells,called guard cells which regulate opening and
closing stomatal pore ,possess chloroplast
•Few epidermal cells,in the vicinity of the guard cells become specialised in their
shape and size,known as subsidiary cells
•Stomatal apparatus= stomatal aperture+guard cells+subsidiary cells
Root hairs •Unicellualar elongation of the epidermal cells and help absorb water and mineral
from soil
Tissue system
•All tissue except epidermis and vascular bundles constitute the ground tissue
Ground •Consist of simple tissue such as parechyma,collenchyma and sclerenchyma s
tissue •Parenchymatous cells are usually present in cortex,pericycle,pith and medullary
system rays, in primary stems and root
•In leavesGround tissue consists of thin-walled chloroplast containing cells called
mesophyll
•Open-Cambium present,possess the ability to form secondary
Vascular (Prsesence/absence xylem and phloem e.g.Dicot stem
tissue of cambium)
system •Closed-Cambium absent,do not form secondary xylem and phloem
(Consist of e.g.Monocot stem
xylem and (Arrangement
phloem) of xylem and •Radial-Xylem and phloem within a vascular bundle are
phloem) arranged in an alternate manner along different radii e.g.root
•Group of tissues derived from a portion of meristem that performs a similar function in the plant body
irrespective of its position,these tissue form a tissue system
•On the basis of their structure and location there are three types of tissue system
Epidermal tissue system (Outer most covering of the whole plant body)
Microbodies
Trichomes•Epidermal hair on stem,usually multicellular
•May be branched or unbranched and soft or stiff,may even be secretory
•Many membrane bound minute vesicles called microbodies that contain various enzymes ,are present in
•Helps in preventing water loss due to transpiration
both plant and animal cells
•All tissue except epidermis and vascular bundles constitute the ground tissue
Ground •Consist of simple tissue such as parechyma,collenchyma and sclerenchyma s
tissue •Parenchymatous cells are usually present in cortex,pericycle,pith and medullary
system rays, in primary stems and root
•In leavesGround tissue consists of thin-walled chloroplast containing cells called
mesophyll
•Open-Cambium present,possess the ability to form secondary
Vascular (Prsesence/absence xylem and phloem e.g.Dicot stem
tissue of cambium)
system •Closed-Cambium absent,do not form secondary xylem and phloem
(Consist of e.g.Monocot stem
xylem and (Arrangement
phloem) of xylem and •Radial-Xylem and phloem within a vascular bundle are
phloem) arranged in an alternate manner along different radii e.g.root
•All carbon compound that we get from living tissue called as biomolecules
Chemical analyse
Living tissue + Trichloroacetic acid
(CL3CCOOH)
Grding
Thick slurry
Living tissue Dried living tissue Burning dried living tissue, results
All water evaporate
(Wet weight) (Dry weight) in oxidation of all carbon
compound
Zwitterionic form
R group -Hydrogen
•A particular property of amino acids is the
ionizable nature of -NH₂ and COOH groups.
•In solutions of different pH, the structure of
amino acids changes.
•Molecule that contains an equal number of
R group -Methyl
both positively and negatively charged
group
R group -Hydroxy
methyl
Lipids
•Generally water insoluble
•They could be simple fatty acid that has a carboxyl group to an R group, R group could be a methyl (-
CH₃) or ethyl (-C₂H₅) or higher number of -CH₃ groups (1 Carbon to 19 carbons )
Example- Palmitic acid has 16 carbons including carboxyl
carbon
Fats Oils
•Cholesterol is an important lipid, which maintain the integrity and fluidity of cell membrane
Polysaccharides
Carbohydrates
Monosaccharides Polysaccharides
•These molecules cannot be further •They are long chains of sugars,
hydrolyzed into smaller sugar units containing different
monosaccharides as building blocks
•Units linked together by glycosidic
bond
Diagrammatic •The right end is called the
representation of
portion of glycogen
reducing end and left end is acid
the non-reducing end
Homopolysaccharides Heteropolysaccharides
•Same monomer units •Different monomer units
Glycosidic bond
Protein
•They are heteropolymer of amino acid acids linked by peptide bonds
•There are 20 type of amino acids ( e.g., alanine, proline, lysine, etc)
•Amino acids can be essential ( dietary protein) or non- essential ( alanine)
•Collagen is the most abundant protein in animal world and Ribulose bisphosphate Carboxylase-
Oxygenase (RuBisCO) is the most abundant protein in the world of the biosphere
•Function-
Structure of protein
Structure of protein
CO- Factor
•Non-protein constituents called cofactors are bound to the the enzyme to make the enzyme
catalytically active
•Catalytic activity is lost when the co-factor is removed from the enzyme.
Enzyme
Cell division
Growth and reproduction are characteristics of cells, indeed of all living organisms
. All cells reproduce by dividing into two, with each parental cell giving rise to two daughter cells each time they divide
Cycles of growth and division allow a single cell to form a structure consisting of millions of cells
Cell Cycle
Cell cycle- The sequence of events by which a cell duplicates its genome, synthesise the other constituents of the cell
and eventually divides into two daughter cells
Although cell growth (in terms of cytoplasmic increase) is a continuous process but DNA synthesis occurs only during
ne specific stage in the cell cycle
The replicated chromosomes (DNA) are then distributed to daughter nuclei by a complex series of events during cell
division and all these events are under genetic control
A typical eukaryotic cell cycle is illustrated by human cells in culture divide once in approximately every 24 hours,
duration of cell cycle can vary from organism to organism and also from cell type to cell type
xample- Cell cycle of yeast is only about of 90 minutes
G1phase
•The interval between mitosis and initiation of DNA replication
•During G1 phase the cell is metabolically active and
continuously grows but does not replicate its DNA
S phase
•Synthesis phase marks the period during which DNA synthesis
or replication takes place ( amount of DNA per cell doubles)
•There is no increase in the chromosome number
•In animal cells, DNA replication begins in the nucleus, and the
G2phase centriole duplicates in the cytoplasm
•Proteins are synthesised in preparation
for mitosis while cell growth continues.
•In animals, mitotic cell division is only seen in the diploid somatic cells. However, there are few exceptions
to this where haploid cells divide by mitosis, for example, male honey bees
•The plants can show mitotic divisions in both haploid and diploid cells
•Equational division- The number of chromosomes in the parent and progeny cells is the same
M Phase
Karyokinesis Cytokinesis
Cytokinesis
•Cytokinesis-The cell itself is divided into two daughter cells by the separation of cytoplasm, at the end of
cell division gets completed
•In an animal cell, cytokinesis occurs as a furrow forms, deepens, and eventually divides the cell cytoplasm
into two.
•In plant cells, wall formation starts from the center and grows outward to meet lateral walls. The new cell
wall begins with a precursor, the cell plate. In animal cells, a furrow appears in the plasma membrane,
deepens, and eventually divides the cell cytoplasm into two
•In some organisms karyokinesis is not followed by cytokinesis as a result of which multinucleate condition
arises leading to the formation of syncytium (e.g., liquid endosperm in coconut)
Prophase
•Prophase which is the first stage of karyokinesis of mitosis follows the S and G2phases of interphase.
• Initiation of condensation of chromosomal material,chromosomal material becomes untangled during
the process of chromatin condensation
•The centrosome, begins to move towards opposite poles of the cell
•The completion of prophase can thus be marked by the following characteristic events
(i)Chromosomal material condenses to form compact mitotic chromosomes
(ii)Centrosome which had undergone duplication during interphase, begins to move towards opposite
poles of the cell. Each centrosome radiates out microtubules called asters. The two asters together with
spindle fibres forms mitotic apparatus.
•Cells at the end of prophase, when viewed under the microscope, do not show golgi complexes,
endoplasmic reticulum, nucleolus and the nuclear envelope
Metaphase
The key features of metaphase are:
(i)Spindle fibres attach to kinetochores of chromosomes.
(ii)Chromosomes are moved to spindle equator and get aligned along metaphase plate through spindle
fibres to both poles.
•The complete disintegration of the nuclear envelope marks the start of the second phase of mitosis,
hence the chromosomes are spread through the cytoplasm of the cell
•At this point, chromosome condensation is finished, and they are clearly visible under the microscope,
making this the optimal stage for studying chromosome morphology.
•. At this stage, metaphase chromosome is made up of two sister chromatids, which are held together by
the centromere
•Kinetochores-Small disc-shaped structures at the surface of the centromere, it serve as the sites of
attachment of spindle fibres (formed by the spindle fibres) to the chromosomes that are moved into
position at the centre of the cell
•the metaphase is characterised by all the chromosomes coming to lie at the equator with one
chromatid of each chromosome connected by its kinetochore to spindle fibres from one pole and its
sister chromatid connected by its kinetochore to spindle fibres from the opposite pole
•The plane of alignment of the chromosomes at metaphase is referred to as the metaphase plate.
Spindle fibre
Centrosome
Chromosomes at equator
(Metaplate)
Anaphase
•Anaphase stage is characterised by the following key events:
(i)Centromeres split and chromatids separate.
(ii)Chromatids move to opposite poles.
•As chromosomes move away from the equatorial plate, each centromere stays directed toward the pole,
leading at the edge, with chromosome arms trailing behind.
Decondensing
chromosomes
Formation of Nuclear envelope
Significance of Mitosis
•Meiosis involves two •Meiosis I is initiated •Meiosis involves pairing •Four haploid
sequential cycles of after the parental of homologous cells are
nuclear and cell chromosomes have chromosomes and formed at the
division called meiosis replicated to recombination between end of meiosis
I and meiosis II but produce identical non-sister chromatids II.
only a single cycle of sister chromatids at of homologous
DNA replication. the S phase chromosomes
Meiosis
Diakinesis
•Marked by terminalisation of chiasmata
•Chromosomes are fully condensed and the meiotic spindle is assembled to prepare
the homologous chromosomes for separation
•By the end of diakinesis, the nucleolus disappears and the nuclear envelope also
breaks down
•Diakinesis represents transition to metaphase
Interkinesis
•The stage between the two meiotic divisions
•Generally short lived.
•There is no replication of DNA during interkinesis
•Interkinesis is followed by prophase II, a much simpler prophase than prophase I.
SIGNIFICANCE OF MEIOSIS
WHAT DO WE KNOW?
Starch formation experiment on a variegated leaf or a leaf partially covered with black paper, exposed to
light, revealed that photosynthesis occurred exclusively in the green sections when light was present.
Another experiment involved enclosing a leaf part in a test tube with KOH-soaked cotton (CO₂ absorber)
and exposing the other half to air. This setup, when placed in light, demonstrated the necessity of CO₂ for
photosynthesis.
EARLY EXPERIMENTS
Joseph Priestley
Joseph Priestley (1733-1804) conducted experiments in 1770.
Experiment focus: Revealing the crucial role of air in the growth
of green plants.
Priestley discovered oxygen in 1774.
Observation: A candle in a closed space (bell jar) extinguishes,
and a mouse suffocates.but when mouse placed with mint plant
in bell jar mouse stays alive, and the candle continues to burn.
Conclusion: Both a burning candle and a breathing animal
somehow alter the air.
Hypothesis: Plants restore to the air whatever breathing animals and burning candles remove.
Jan Ingenhousz
Jan Ingenhousz (1730-1799) demonstrated the essential role of
sunlight in a plant process.
Sunlight is essential to plants for purification of air that is tainted
by burning candles or breathing animals.
An elegant experiment involving an aquatic plant revealed the
formation of small bubbles around green parts in bright sunlight.
The bubbles were later identified as oxygen by Ingenhousz.
The experiment established that only the green parts of plants could release oxygen.
Usually the chloroplasts align themselves along the walls of the mesophyll
2
cells, such
that they get the optimum quantity of the incident light.
Chloroplast has a membranous system comprising grana, stroma lamellae, and matrix
stroma.
Clear division of labor exists within the chloroplast.
Leaf pigments of any green plant can be separated through paper chromatography.
A chromatographic separation of the leaf pigments shows that the colour that we see
in leaves is not due to a single pigment but due to four pigments
Light reactions, also known as the 'Photochemical' phase, involve light absorption,
water splitting, oxygen release, and the generation of high-energy chemical
intermediates—ATP and NADPH.
Multiple protein complexes play a role in this process, with pigments organized into two
distinct photochemical light-harvesting complexes (LHC) within Photosystem I (PS I)
and Photosystem II (PS II).
Living organisms extract energy from oxidizable substances and store it as bond energy,
with ATP serving as a carrier.
The process through which ATP is synthesised by cells (in mitochondria and
chloroplasts) is named phosphorylation
Photo-phosphorylation, the light-dependent synthesis of ATP from ADP and inorganic
phosphate, occurs in the presence of light.
Non-cyclic photo-phosphorylation happens when both photosystems work sequentially
(PS II followed by PS I).
Electron transport chain connects the two photosystems, forming the Z scheme,
leading to the synthesis of ATP and NADPH + H+.
(a) Since splitting of the water molecule takes place on the inner side of the membrane,
the protons or hydrogen ions that are produced by the splitting of water
accumulate within the lumen of the thylakoids.
(b) As electrons move through the photosystems, protons are transported across the
membrane. This happens because the primary accepter of electron (Pheophytin)
which is located towards the outer side of the membrane transfers its electron not
to an electron carrier but to an H carrier. Hence, this molecule removes a proton
from the stroma while transporting an electron. When this molecule passes on its
electron to the electron carrier on the inner side of the membrane, the proton is
released into the inner side or the lumen side of the membrane.
(c)The NADP reductase enzyme is located on the stroma side of the membrane. Along
with electrons that come from the acceptor of electrons of PS I, protons are
necessary for the reduction of NADP+ to NADPH+ H+ . These protons are also
removed from the stroma.
In the chloroplast, protons decrease in the stroma but accumulate in the lumen,
creating a proton gradient across the thylakoid membrane and a pH decrease in the
lumen.
The gradient is broken down due to the movement of protons across the membrane to
the stroma through the transmembrane channel of the CF0 of the ATP synthase
CF0 CF1
Embedded in the thylakoid Protrudes on the outer surface of the
membrane and forms a thylakoid membrane on the side that
transmembrane channel that faces the stroma. ATP synthase, which
carries out facilitated diffusion of makes the enzyme synthesis several
protons across the membrane molecules of energy-packed ATP.
Chemiosmosis involves a membrane, proton pump, gradient, and ATP synthase.
Energy pumps protons across the membrane, creating a high concentration in the
thylakoid lumen. ATP synthase allows proton diffusion, releasing energy to activate
the enzyme for ATP formation. ATP, along with NADPH from electron movement, is
used immediately in stroma for biosynthetic reactions, including CO 2 fixation and
sugar synthesis.
Oxygen is released from the chloroplast, while ATP and NADPH play a crucial role in
driving the processes leading to the production of food, specifically sugars.
This marks the biosynthetic phase of photosynthesis, which is not directly reliant on
light presence but is influenced by the byproducts of the light reaction, namely ATP
and NADPH, in addition to CO 2 and H2O.
Verification of this phenomenon is straightforward: after light becomes unavailable,
the biosynthetic process persists temporarily before halting. Upon reintroduction of
light, the synthesis recommences.
It's worth noting that the continuation and cessation of the biosynthetic process are
tied to the availability and absence of light, respectively.
Melvin Calvin utilization of radioactive carbon-14 in studies on algal photosynthesis
resulted in the revelation that the initial product of CO2 fixation was a 3-carbon
organic acid.
Additionally, he played a role in elucidating the entire biosynthetic pathway, and
consequently, it was named the Calvin cycle in his honor.
The initial product recognized was 3-phosphoglyceric acid, (PGA).
Scientists investigated if all plants produce PGA as the initial product of CO2 fixation
or if different plants yield alternative products.
Broad-ranging experiments revealed a distinct group of plants wherein the primary
stable product of CO2fixation was an organic acid containing 4 carbon atoms—
identified as oxaloacetic acid (OAA).
Subsequently, two main types of CO2 assimilation during photosynthesis were recognized
C 3 pathway C4 pathway
Initial product - C3 acid (PGA) Initial product - C 4acid (OAA).
First product was a C3 acid, the primary acceptor would be a 2-carbon compound; they
spent many years trying to identify a 2-carbon compound before they discovered the 5-
carbon RuBP.
The Calvin Cycle
Calvin and his co-workers then worked out the whole pathway and showed that the
pathway operated in a cyclic manner; the RuBP was regenerated
Calvin pathway occurs in all photosynthetic plants; it does not matter whether they
have C3 or C4 (or any other) pathways
Carboxylation
Carboxylation in the Calvin cycle is the crucial
fixation of CO2 into a stable organic intermediate,
catalyzed by RuBisCO. This enzyme, also known as
RuBP carboxylase-oxygenase or RuBisCO, converts
CO2 into two molecules of 3-PGA.
Regeneration Reduction
Series of reactions leading to
Regeneration of the CO2 acceptor
glucose formation. Involves 2 ATP
molecule RuBP is crucial if the cycle
and 2 NADPH per fixed CO2
is to continue uninterrupted. The
molecule.Requires fixation of six CO2
regeneration steps require one ATP
molecules and six cycle turns for
for phosphorylation to form RuBP
one glucose molecule.
Plants that are adapted to dry tropical regions have the C4 pathway(cyclic
process).Example-maize and sorghum
C4 plants are special: They have a special type of leaf anatomy, they tolerate higher
temperatures, they show a response to high light intensities, they lack a process called
photorespiration and have greater productivity of biomass.
The particularly large cells around the vascular bundles of the C4 plants are called
bundle sheath cells, and the leaves which have such anatomy are said to have ‘Kranz’
anatomy (‘Kranz’ means ‘wreath’ and is a reflection of the arrangement of cells)
The bundle sheath cells may form several layers around the vascular bundles; they are
characterised by-
(i)having a large number of chloroplasts
(ii)thick walls impervious to gaseous exchange
(iii)no intercellular spaces
Mechanism of C4 pathway -
(i)The primary CO2 acceptor is a 3-carbon molecule phosphoenol pyruvate (PEP) and is
present in the mesophyll cells. The enzyme responsible for this fixation is PEP
carboxylase or PEPcase. It is important to register that the mesophyll cells lack
RuBisCO enzyme. The C 4 acid OAA is formed in the mesophyll cells
(ii)It then forms other 4-carbon compounds like malic acid or aspartic acid in the
mesophyll cells itself, which are transported to the bundle sheath cells. In the bundle
sheath cells these C 4 acids are broken down to release CO 2 and a 3-carbon molecule
PHOTORESPIRATION
Features of RuBisCo-
(i)RuBisCO has a much greater affinity for CO 2 when the CO2 : O 2 is nearly
equal(binding is competitive)
(ii)RuBisCO that is the most abundant enzyme in the world and it is characterised by
the fact that its active site can bind to both CO2 and O 2
(iii)It is the relative concentration of O2 and CO 2 that determines which of the two
will bind to the enzyme.
In C3 plants some O2 does bind to RuBisCO, and hence CO2 fixation is decreased. Here
the RuBP instead of being converted to 2 molecules of PGA binds with O2 to form one
molecule of phosphoglycerate and phosphoglycolate (2 Carbon) in a pathway called
photorespiration (Discovered by Decker and Tio in tobacco)
Photorespiration does not synthesize
Differences between C3and C 4 Plants
sugars or ATP; instead, it releases CO
2
and consumes ATP. The pathway
lacks ATP and NADPH synthesis, and Bundle
Mesophyll
its biological function remains Sheath
unknown. Mesophyll Mesophyll
C4plants avoid photorespiration by
elevating CO2concentration at the 1 2
enzyme site.The breakdown of C4
acid in bundle sheath cells releases
RuBP PEP
CO2 , increasing intracellular CO 2
5 3
concentration.This ensures RuBisCO
acts primarily as a carboxylase, PGA OAA
minimizing oxygenase activity.
3 4
Yes Yes
Yes Yes
Mesophyll Bundle
Sheath
Medium High
Negligible Negligible
High Negligible
High Negligible
Negligible Negligible
20-25oC 30-40oC
Rice and Maize and
Wheat Sugarcane
RubisCo
FACTORS AFFECTING PHOTOSYNTHESIS
Light
Light affect photosynthesis in three different ways-
(i)light quality
(ii)light intensity
(iii) duration of exposure to light
Linear correlation exists between incident light and CO2 fixation rates under low light
intensities; however, at higher intensities, the rate plateaus due to limiting factors
Notably, light saturation occurs at 10% of full sunlight, suggesting that light is seldom
limiting in nature, except for shaded or dense forest environments. Exceeding a certain
light .threshold leads to chlorophyll breakdown and a decline in photosynthesis
Carbon dioxide Concentration
Temperature
The breaking of the C-C bonds of complex compounds through oxidation within the cells, leading to release of
considerable amount of energy is called respiration and the compounds that are oxidised during this process
are known as respiratory substrates
•The compounds that are oxidised during this process are known as respiratory substrates. Usually carbohydrates are
oxidised to release energy, but proteins, fats and even organic acids can be used as respiratory substances in some plants,
under certain conditions
•The procedure Involves a sequence of gradual stepwise reactions regulated by enzymes, and the captured energy is
retained as chemical energy in the form of ATP, which is disintegrated whenever and wherever energy needs to be used.
DO PLANTS BREATHE?
Yes, plants require O 2 for respiration to occur and they also give CO 2 . Hence, plants
have systems in place that ensure the availability of O 2 .
Unlike animals, plants lack specialized respiratory organs
There are multiple reasons explain why plants can function without dedicated respiratory
organs-
(i)Each plant part manages its gas-exchange independently, with minimal gas
transport between them.
(ii)Plants have low respiratory rates in roots, stems, and leaves compared to animals.
Significant gas exchange occurs mainly during photosynthesis, and each leaf
efficiently meets its oxygen needs during these periods due to internal release.
(iii)Distance that gases must diffuse even in large, bulky plants is not great.
(iv)The complete combustion of glucose, which produces CO2 and H2O as end products,
yields energy most of which is given out as heat.
The plant cell strategically catabolizes glucose in multiple small steps, ensuring that not
all liberated energy is lost as heat. This approach allows the energy released to be
effectively coupled to ATP synthesis.
Many present-day organisms are adapted to anaerobic conditions. Some are facultative
anaerobes, while others have an obligate requirement for anaerobic conditions.
Regardless, all living organisms possess the enzymatic machinery for the partial
oxidation of glucose without oxygen, known as glycolysis.
GLYCOLYSIS (EMP pathway)
The term glycolysis has originated from the Greek words, glycos for sugar, and lysis for
splitting.
The scheme of glycolysis was given by Gustav Embden, Otto Meyerhof, and J. Parnas
In anaerobic organisms, it is the only process in respiration
Glycolysis occurs in the cytoplasm of the cell of all living organisms
Glucose in plants is derived from sucrose, the end product of photosynthesis, or storage
carbohydrates.
Sucrose is converted into glucose and fructose by invertase, facilitating their entry into
the glycolytic pathway.
Hexokinase phosphorylates glucose and fructose, forming glucose-6-phosphate, which
then isomerizes to fructose-6-phosphate.
The subsequent steps of glucose and fructose metabolism in glycolysis are identical.
Glycolysis involves ten enzyme-controlled reactions(where 1,3 and 10 are
irreversible),leading to the production of pyruvate from glucose.
AEROBIC RESPIRATION
Aerobic respiration is the process of fully oxidizing organic substances in the presence
of oxygen, releasing CO 2, water, and a significant amount of energy from the
substrate.In eukaryotes these steps take place within the mitochondria and this
requires oxygen
The crucial events in aerobic respiration are:
(i)The complete oxidation of pyruvate by the stepwise removal of all the hydrogen
atoms, leaving three molecules of CO2 .(Takes place in the matrix of the mitochondria)
(ii) The passing on of the electrons removed as part of the hydrogen atoms to
Pyruvate, generated through glycolytic carbohydrate catabolism in the cytosol,
undergoes oxidative decarboxylation in the mitochondrial matrix via pyruvic
dehydrogenase.
The reactions catalysed by pyruvic dehydrogenase require the participation of several
coenzymes, including NAD+ and Coenzyme A.
Mg 2+
Pyruvic acid +CoA+NAD+ Acetyl CoA +CO2+NADH + H +
Pyruvate dehydrogenase
•In this process, two NADH molecules are generated through the metabolism of two
pyruvic acid molecules, derived from one glucose molecule in glycolysis.
(Krebs’ cycle after the scientist
Tricarboxylic Acid Cycle
Hans Krebs)
Occurs inside mitochondrial matrix of eukaryotic cells
First reaction of Kerb’s cycle is condensation,then isomerisation-
AcetyCoA
OAA Citrate synthase
Citric Acid Isomeises Isocitrate
Two consecutive decarboxylation steps result in the formation of α-ketoglutaric acid
and succinyl-CoA.
Succinyl-CoA is oxidized to OAA, enabling the cycle to proceed.
The conversion of succinyl-CoA to succinic acid yields GTP through substrate-level
phosphorylation.
GTP is converted to GDP in a coupled reaction, concurrently synthesizing ATP from
ADP.
Three instances of NAD+ reduction to NADH + H+ and one instance of FAD+ reduction
to FADH2 occur in the cycle.
The ongoing oxidation of acetyl CoA in the TCA cycle necessitates the continuous
replenishment of oxaloacetic acid.
Regeneration of NAD+ and FAD+ from NADH and FADH2 is also required for the
cycle to persist.
The summary equation for this phase of respiration may be written as follows:
Electron Transport System (ETS)
and Oxidative Phosphorylation
The metabolic pathway through which the electron passes from one carrier to another,
is called the electron transport system (ETS) and it is present in the inner
mitochondrial membrane.
NADH+H+ and FADH are oxidised through the electron transport system and the
electrons are passed on to O2 resulting in the formation of H2O
Electrons from NADH (produced in the mitochondrial matrix during the citric acid
cycle) are oxidized by NADH dehydrogenase (complex I).
Electrons are transferred to ubiquinone in the inner membrane, which also receives
reducing equivalents from FADH2 (complex II) generated during succinate oxidation.
Oxidized by NADH
dehydrogenase (complex I)
Ubiquinone
F1 contains the ATP synthesis site, while F0 forms the proton channel across the inner
membrane.
Proton passage through F0 is coupled to the F1 catalytic site, resulting in ATP
production.
For each ATP produced, 4H+ traverse F0, moving from the intermembrane space to the
matrix along the electrochemical proton gradient
Calculating the net ATP gain from oxidizing a glucose molecule is often a theoretical
exercise due to the complex and simultaneous nature of metabolic pathways in living
systems.
In reality, pathways operate concurrently, with substrates entering and leaving as
needed, and ATP being utilized on demand.
Enzymatic rates are regulated by various factors, making assumptions challenging.
Despite these complexities, performing such calculations is valuable for understanding
the efficiency of the living system in energy extraction and storage.
The theoretical net gain of ATP during aerobic respiration of one glucose molecule is
38 ATP molecules.
Comparisation fermentation and aerobic respiration:
AMPHIBOLIC PATHWAY
Proteins undergo degradation by proteases, and the resulting individual amino acids,
post-deamination, enter the Krebs' cycle at various stages or may enter as pyruvate
or acetyl CoA.
•The respiratory quotient depends upon the type of respiratory substrate used during
respiration
Leaves, flowers, and fruits of the same tree have limited dimensions and fall
periodically.
All plant organs are composed of various tissues, questioning the relationship
between cell structure, tissue, organ, and their functions.
Inquiry about the possibility of altering the structure and function of plant cells,
tissues, and organs.
All plant cells originate from the zygote, but they exhibit different structural and
functional attributes.
Development in plants involves growth and differentiation, leading to a highly
ordered succession of events.
The process results in the formation of a complex body organization, including
roots, leaves, branches, flowers, fruits, and seeds.
The initial step in plant growth is seed germination, influenced by favorable
environmental conditions.
Seeds enter a period of suspended growth or rest in the absence of favorable
conditions.
Upon the return of favorable conditions, seeds resume metabolic activities, and
growth resumes
Phases of Growth
The increased growth per unit time is termed as growth rate. Thus, rate of growth
can be expressed mathematically
An organism, or a part of the organism can produce more cells in a variety of
ways like Arithmetic Or Geometric growth
Arithmetic Growth
Arithmetic growth involves mitotic cell division.
After division, one daughter cell continues to divide, while the other differentiates
and matures.
The simplest example is a root elongating at a constant rate.
Graph shows a linear curve when organ length is plotted against time.
Mathematically expressed as L t = L0 + rt
Lt = length at time ‘t’
L0 = length at time ‘zero’
r = growth rate / elongation per unit time.
Water, oxygen, and nutrients are crucial elements for plant growth.
Plant cells grow through cell enlargement, which requires water.
Turgidity of cells is essential for extension growth.
Plant growth is closely tied to the water status of the plant.
Water serves as a medium for enzymatic activities necessary for growth.
Oxygen is essential for releasing metabolic energy needed for growth.
Nutrients (macro and micro essential elements) are required for protoplasm
synthesis and as an energy source.
Each plant organism has an optimum temperature range for growth.
Deviation from this range can be detrimental to plant survival.
Environmental signals like light and gravity influence specific growth phase
Cells from root apical, shoot-apical meristems, and cambium mature through
differentiation.
Differentiation involves structural changes in cell walls and protoplasm.
Example-Tracheary element formation involves loss of protoplasm and
development of lignocellulosic secondary cell walls.
Anatomical features in plants are correlated with their functions.
Plants exhibit dedifferentiation, where differentiated cells regain the capacity to
divide under certain conditions.
Dedifferentiation example: Formation of meristems like interfascicular cambium
and cork cambium from fully differentiated parenchyma cells.
Meristems/tissues from dedifferentiation can divide and produce cells that
mature to perform specific functions (redifferentiation)
DEVELOPMENT
Development encompasses all changes in an organism's life cycle from seed
germination to senescence.
Figure illustrates the sequence of processes in the development of a higher plant
cell.
The diagrammatic representation is also applicable to tissues and organs.
Sequence of the developmental process in a plant cell
Auxins
Auxins, initially isolated from human urine,
are represented by indole-3-acetic acid (IAA)
and other natural/synthetic compounds with
growth-regulating properties.
Generally produced in growing apices of
stems and roots, auxins migrate to their
action regions.
IAA and indole butyric acid (IBA) isolated
from plants; NAA and 2, 4-D are synthetic
auxins. Apical dominance in plants :
Used extensively in agriculture and (a) A plant with apical bud
horticulture. intact
Auxins, like IAA and IBA, promote rooting in (b) A plant with apical bud
stem cuttings for plant propagation. removed Note the growth of
Auxins induce flowering, e.g., in pineapples, lateral buds into branches
and prevent early fruit/leaf drop but after decapitation
promote abscission of mature leaves/fruits.
Apical dominance in higher plants inhibits lateral buds' growth; decapitation
(shoot tip removal) promotes lateral bud growth.
Applied in tea plantations and hedge-making; auxins induce parthenocarpy in
tomatoes.
Auxins serve as herbicides; 2, 4-D kills dicotyledonous weeds without affecting
mature monocotyledonous plants.
2, 4-D used to create weed-free lawns; auxins control xylem differentiation and
assist in cell division.
Gibberellins
Gibberellins are a type of plant growth regulator (PGR).
Over 100 gibberellins identified in various organisms like fungi and higher
plants.
Denoted as GA1, GA2, GA3, etc., with Gibberellic acid (GA3) being the most
studied.
All GAs are acidic and induce diverse physiological responses in plants.
GAs can increase the length of the plant axis, used to elongate grape stalks.
GAs cause elongation and improved shape in fruits like apples, delaying
senescence.
GA3 is utilized in the brewing industry to accelerate the malting process.
Gibberellins applied to sugarcane crops increase stem length, boosting yield by up
to 20 tonnes per acre.
GAs expedite maturation in juvenile conifers, leading to early seed production.
Gibberellins induce bolting (internode elongation before flowering) in beets,
cabbages, and rosette plants.
Cytokinin
Cytokinin discovered as kinetin, a modified form of adenine from autoclaved
herring sperm DNA.
Kinetin do not naturally occurring in plants.
Zeatin isolated from corn-kernels and coconut milk in search for natural
substances with cytokinin-like activities.
Discovery of zeatin led to identification of several naturally occurring
cytokinin and some synthetic compounds with cell division promoting activity.
Natural cytokinin synthesized in regions of rapid cell division like root apices,
developing shoot buds, and young fruits.
Functions of cytokinin include promoting new leaves, chloroplasts in leaves, lateral
shoot growth, and adventitious shoot formation.
Cytokinin help overcome apical dominance.
They promote nutrient mobilization, contributing to the delay of leaf senescence.
Ethylene
RESPIRATORY ORGANS
Breathing mechanisms vary based on habitat and
organizational levels in animals.
Lower invertebrates (sponges, coelenterates, flatworms)
exchange oxygen and carbon dioxide through simple diffusion
over their body surface.
Earthworms use a moist cuticle, and insects have tracheal tubes
for transporting atmospheric air.
Aquatic arthropods and mollusks use gills (branchial
respiration), while terrestrial forms use lungs (pulmonary
respiration).
Vertebrates exhibit different respiratory methods: fishes use
gills, and amphibians, reptiles, birds, and mammals respire
through lungs.
Amphibians like frogs can also respire through their moist skin
(cutaneous respiration).
Nasal chamber connects to pharynx, a common passage for food and air.
Pharynx leads to larynx (a cartilaginous box for sound production),hence called
the sound box
Epiglottis covers glottis during swallowing to prevent food entry into the larynx
Trachea is a straight tube dividing into right and left primary bronchi at the 5th
thoracic vertebra.
Each bronchi undergoes repeated divisions to form the secondary and tertiary
bronchi and bronchioles ending up in very thin terminal bronchioles.
The tracheae, primary, secondary and tertiary bronchi, and initial bronchioles
are supported by incomplete cartilaginous rings
Terminal bronchioles lead to alveoli, thin, irregular-walled, vascularized structures.
Lungs comprise a branching network of bronchi, bronchioles, and alveoli.
Lungs covered by double-layered pleura with pleural fluid to reduce friction.
The outer pleural membrane is in close contact with the thoracic lining whereas
the inner pleural membrane is in contact with the lung surface.
External nostrils to terminal bronchioles form the conducting part.
Function-Conducting part transports, clears, humidifies, and warms atmospheric
air.
Exchange part facilitates oxygen and Carbon dioxide diffusion between blood and
atmospheric air.
Function-Exchange part facilitates oxygen and carbon dioxide diffusion between
blood and atmospheric air.
Lungs in thoracic chamber, an air-tight space.
Thoracic chamber boundaries: dorsally by vertebrae, ventrally by sternum,
laterally by ribs, lower side by diaphragm.
Changes in thoracic cavity volume affect lung (pulmonary) cavity.
Essential for breathing; direct alteration of pulmonary volume not possible.
Pathway
Nostrils
Nasal chamber
Pharynx
Larynx
Trachea
Bronchus
Primary
Secondary
Inside
Initial bronchiole
Lungs
Terminal bronchiole
Alveoli
Diagrammatic view of human respiratory
system (sectional view of the left lung is
also shown)
Breathing Process:
Two stages: inspiration and expiration.
Inspiration involves drawing in atmospheric air; expiration releases alveolar air.
Movement of air is facilitated by a pressure gradient between lungs and
atmosphere.
Pressure Dynamics:
Inspiration occurs when intra-pulmonary pressure is less than atmospheric
pressure.
Expiration happens when intra-pulmonary pressure is higher than atmospheric
pressure.
Muscle Involvement:
Diaphragm and specialized muscles (external and internal intercostals) create
pressure gradients.
Contraction of diaphragm increases thoracic chamber volume in antero-
posterior axis.
Contraction of external intercostal muscles lifts ribs and sternum, increasing
thoracic volume dorso-ventrally.
Volume and Pressure Relationship:
Increase in thoracic volume leads to an increase in pulmonary volume.
Increased pulmonary volume decreases intra-pulmonary pressure, causing
inspiration.
Relaxation of muscles decreases thoracic volume, increasing intra-pulmonary
pressure, leading to expiration.
Additional Muscles and Frequency:
Abdominal muscles aid in increasing the strength of inspiration and expiration.
Average breathing rate for a healthy human: 12-16 times per minute.
Clinical Assessment:
The volume of air involved in breathing movements can be estimated by using a
spirometer which helps in clinical assessment of pulmonary functions
Mechanism of breathing showing : (a) inspiration (b) expiration
Tidal Volume (TV): Volume of air inspired or expired during a normal respiration.
It is approx. 500 mL., i.e., a healthy man can inspire or expire approximately 6000
to 8000 mL of air per minute.
Inspiratory Reserve Volume (IRV): Additional volume of air, a person can inspire
by a forcible inspiration. This averages 2500 mL to 3000 mL.
Expiratory Reserve Volume (ERV): Additional volume of air, a person can expire by
a forcible expiration. This averages 1000 mL to 1100 mL.
Residual Volume (RV): Volume of air remaining in the lungs even after a forcible
expiration. This averages 1100 mL to 1200 mL. By adding up a few respiratory
volumes described above, one can derive various pulmonary capacities, which can
be used in clinical diagnosis.
Inspiratory Capacity (IC): Total volume of air a person can inspire after a normal
expiration. This includes tidal volume and inspiratory reserve volume ( TV+IRV).
Expiratory Capacity (EC): Total volume of air a person can expire after a normal
inspiration. This includes tidal volume and expiratory reserve volume (TV+ERV).
Functional Residual Capacity (FRC): Volume of air that will remain in the lungs
after a normal expiration. This includes ERV+RV.
Vital Capacity (VC): The maximum volume of air a person can breathe in after a
forced expiration. This includes ERV, TV and IRV or the maximum volume of air a
person can breathe out after a forced inspiration.
Total Lung Capacity (TLC): Total volume of air accommodated in the lungs at the
end of a forced inspiration. This includes RV, ERV, TV and IRV or vital capacity +
residual volume
EXCHANGE OF GASES
Alveoli are primary gas exchange sites, facilitating the exchange of O2 and CO2.
Gas exchange also occurs between blood and tissues via simple diffusion.
Diffusion is based on pressure/concentration gradients, affected by gas solubility
and membrane thickness.
Partial pressure, represented as pO2 for oxygen and pCO 2 for carbon dioxide, is the
pressure contributed by an individual gas in a gas mixture.
Atmospheric air and the two diffusion sites have different partial pressures for O 2
and CO2
Favorable conditions in the body for oxygen diffusion from alveoli to tissues and
carbon dioxide diffusion from tissues to alveoli
A Diagram of a section of an alveolus with a pulmonary capillary.
TRANSPORT OF GASES
Blood is the medium of transport for oxygen and carbon dioxide . About 97 per
cent of oxygen is transported by RBCs in the blood.
The remaining 3 per cent of oxygen is carried in a dissolved state through the
plasma. Nearly 20-25 per cent of carbon dioxide is transported by RBCs whereas
70 per cent of it is carried as bicarbonate.
About 7 per cent of carbon dioxide is carried in a dissolved state through plasma
Transport of Oxygen
Alveoli conditions (high pO2, low pCO2, low H+, lower temperature) favor
oxyhemoglobin formation.
Tissue conditions (low pO2, high pCO2, high H+, higher temperature) favor oxygen
dissociation from oxyhemoglobin.
Indicates oxygen binds in lungs and dissociates in tissues.
Normal physiological conditions: 100 ml of oxygenated blood delivers around 5 ml
of oxygen to tissues
REGULATION OF RESPIRATION
Plasma
Plasma: Constitutes 55% of blood, straw-colored and viscous.
Composition: 90-92% water, 6-8% proteins (fibrinogen, globulins, albumins).
Functions: Fibrinogen aids blood clotting, globulins support the body's defense
mechanisms, albumins maintain osmotic balance.
Minerals: Contains Na+, Ca++, Mg++, HCO3–, Cl–.
Additional Components: Includes glucose, amino acids, lipids in transit.
Coagulation Factors: Present in plasma in an inactive form.
Clotting: Fibrinogens required for clotting; plasma without clotting factors is
called serum.
Formed Elements
Leucocytes
Leucocytes or white blood cells (WBC), colorless (no hemoglobin).
Nucleated, lower in number: 6000-8000 mm–3 of blood.
Generally short-lived
Type of WBCs
Granulocytes Agranulocytes
Lymphocytes Monocytes
Granulocytes
Neutrophils: 60-65% of total WBCs, phagocytic cells , destroy foreign organisms.
Basophils: 0.5-1% of total WBCs, secrete histamine, serotonin, heparin, involved in
inflammatory reactions.
Eosinophils: 2-3% of total WBCs, resist infections, associated with allergic
reactions
Thrombocytes
Platelets, or thrombocytes, are cell fragments derived from megakaryocytes in
the bone marrow.
Normal blood platelet count: 1,500,00-3,500,00 platelets mm–3.
Platelets release substances crucial for blood coagulation.
A decrease in platelet count can result in clotting disorders.
Reduced platelets may lead to excessive blood loss from the body.
Blood Groups
A B AB O Rh positive Rh negative
ABO grouping
ABO grouping is based on the presence or absence of surface antigens (A and
B) on RBCs.
Plasma contains natural antibodies (proteins produced in response to
antigens) corresponding to the antigens.
Blood groups A, B, AB, and O have different distributions of antigens and
antibodies.
Matching donor and recipient blood types is crucial for blood transfusions to
prevent clumping and RBC destruction
Blood Groups and Donor Compatibility
From the above mentioned table it is evident that group ‘O’ blood can
be donated to persons with any other blood group and hence ‘O’ group
individuals are called ‘universal donors’. Persons with ‘AB’ group can
accept blood from persons with AB as well as the other groups of blood.
Therefore, such persons are called ‘universal recipients’
Rh grouping
Rh Antigen: Present on RBCs of about 80% of humans, making them Rh positive
(Rh+ve), while those without are Rh negative (Rh-ve).
Transfusion Considerations: Matching Rh groups is crucial to avoid the formation
of antibodies when an Rh-ve person is exposed to Rh+ve blood.
Rh Incompatibility: Can occur in pregnancies where an Rh-ve mother carries an
Rh+ve fetus. During the first pregnancy, the bloods are separated, but exposure
during delivery may lead to antibody development in subsequent pregnancies.
Erythroblastosis Foetalis
Special case of Rh incompatibility between Rh-ve blood of a pregnant mother
with Rh+ve blood pf the foetus
Rh antigen to the Rh-ve blood of the mother in First pregnancy
Reason- As two blood are separated by the placenta .During delivery of first child
exposure of maternal blood to small amount of Rh+ve blood from foetus. Mother
body starts preparing antibodies againts Rh antigen in her blood First foetus
delivery will be normal but subsequent pregnancies,Rh antibodies from
mother(Rh-ve) can leak into the blood of the foetus and destroy the RBC of
foetal . this would leads fatal to the foetus or could cause serve anaemia and
jaundice to the bady
Prevention: Administering anti-Rh antibodies to the Rh-ve mother after the first
delivery can prevent complications in subsequent pregnancies
Coagulation of Blood
CIRCULATORY PATHWAYS
Open Close
Open circulatory system
Open circulatory system is present in arthropods and molluscs in which blood
pumped by the heart passes through large vessels into open spaces or body cavities
called sinuses
Human circulatory system: heart, closed blood vessels, and circulating blood.
Heart , the mesodermally derived organ, located in the thoracic cavity, slightly
tilted to the left, protected by pericardium
Heart has four chambers: two atria (upper) and two ventricles (lower).
Inter-atrial septum separates right and left atria; inter-ventricular septum
separates left and right ventricle
Atrio-ventricular septum separates atrium and ventricle of the same side.
The opening between the right atrium and the right ventricle is guarded by a
valve formed of three muscular flaps or cusps, the tricuspid valve, whereas a
bicuspid or mitral valve guards the opening between the left atrium and the left
ventricle.
The valves in the heart allows the flow of blood only in one direction, i.e., from
the atria to the ventricles and from the ventricles to the pulmonary artery or
aorta. These valves prevent any backward flow
The entire heart is composed of cardiac muscles, with thicker walls in the
ventricles compared to the atria.
Specialized cardiac musculature known as nodal tissue is distributed in the heart.
The sino-atrial node (SAN) is located in the right upper corner of the right
atrium, and the atrio-ventricular node (AVN) is found in the lower left corner of
the right atrium near the atrio-ventricular septum.
The atrio-ventricular bundle (AV bundle) extends from the AVN, passing through
the atrio-ventricular septa, and divides into right and left bundles on the top of
the inter-ventricular septum.
These bundles give rise to purkinje fibres, minute fibres throughout the ventricular
musculature.
Nodal musculature can generate action potentials autonomously, being
autoexcitable.
The sino-atrial node (SAN) can generate the maximum number of action
potentials (70-75 min–1) and serves as the pacemaker, initiating and maintaining
the rhythmic contractile activity of the heart.
The average human heart beats 70-75 times per minute.
Cardiac Cycle
Electrocardiograph
Human Respiratory(ECG)
System
Nasal chamber connects to pharynx, a common passage for food and air.
Hospital TV scene: Patient on monitoring machine during cardiac arrest.
Pharynx leads to larynx (a cartilaginous box for sound production),hence called
Machine: Electrocardiograph (ECG).
the sound box
ECG purpose: Graphical representation of heart's electrical activity.
Epiglottis covers glottis during swallowing to prevent food entry into the larynx
Monitoring shows voltage traces and sound signals.
Trachea is a straight tube dividing into right and left primary bronchi at the 5th
Typical TV sound: "pip... pip... pip... peeeeeeeeeeeeeeeeeeeeee."
thoracic vertebra.
ECG captures cardiac cycle data.
2
2
2 2
The exchange of O 2 from the atmosphere with CO2 produced by cells is known as
breathing ECG
Standard or respiration
involves connecting a patient to a machine with three leads (wrist
and left ankle) for continuous heart monitoring.
Detailed evaluation requires multiple leads attached to the chest region.
RESPIRATORY ORGANS
Peaks in ECG labeled from P to T correspond to specific heart electrical activities.
P-wave signifies atrial excitation, leading to atrial contraction.
Breathing
QRS complex mechanisms
represents vary based on
ventricular habitat and initiating ventricular
depolarization,
organizational
contraction and levels in animals.
systole.
Lower invertebrates
T-wave (sponges,
signifies ventricular coelenterates,marking
repolarization, flatworms)
the end of systole.
exchange oxygen
Counting and carbon
QRS complexes dioxideheart
determines through
beatsimple
rate.
diffusion
Similar ECGover their for
shapes body surface.
a given lead configuration in different individuals;
Earthwormssuggest
deviations use a moist cuticle, and
abnormalities insects have tracheal
or diseases.
tubes clinical
ECG's for transporting
significanceatmospheric air.
lies in detecting deviations for diagnosis
Aquatic arthropods and mollusks use gills (branchial
respiration), while terrestrial forms use lungs (pulmonary
respiration).
DOUBLE CIRCULATION
Vertebrates exhibit different respiratory methods: fishes
use gills, and amphibians, reptiles, birds, and mammals
respire through
Blood flows lungs.fixed routes in arteries and veins.
through
Amphibians
Arteries andlikeveinsfrogs
havecan alsolayers:
three respiretunica
through theirtunica
intima, moist media, and tunica
skin (cutaneous respiration).
externa.
Tunica media is thinner in veins.
Right ventricle pumps blood into the pulmonary artery, while the left ventricle
pumps blood into the Human
aorta. Respiratory System
Pulmonary circulation involves the passage of deoxygenated blood to the lungs
Nasal chamber
and return connects toblood
of oxygenated pharynx, a common
to the passage for food and air.
left atrium.
Pharynx
Systemic leads to larynx
circulation (a cartilaginous
transports boxblood
oxygenated for sound
fromproduction),hence called
the aorta to tissues and
the sound
returns box
deoxygenated blood to the right atrium via venules, veins, and vena cava
Epiglottis covers glottis during swallowing to prevent food entry into the larynx
Trachea is a straight tube dividing into right and left primary bronchi at the 5th
thoracic vertebra.
2
2
2 2
The exchange of O 2 from the atmosphere with CO2 produced by cells is known as
breathing or respiration
RESPIRATORY ORGANS
High Blood2 Pressure (Hypertension): Hypertension is the term for blood pressure
that is higher than normal (120/80). In this measurement 120 mm Hg (millimetres
of mercury pressure) 2 is the systolic, or pumping, pressure and 80 mm Hg is the
diastolic, or resting, pressure.
2 If repeated checks of2blood pressure of an
individual
The exchangeis 140/90 (140 the
of O 2 from overatmosphere
90) or higher, it CO
with shows hypertension. High blood
2 produced by cells is known as
pressure leads
breathing to heart diseases and also affects vital organs like brain and
or respiration
kidney.
Coronary Artery Disease (CAD): Coronary Artery Disease, often referred to as
atherosclerosis, affectsRESPIRATORY
the vessels that supply ORGANS
blood to the heart muscle. It is
caused by deposits of calcium, fat, cholesterol and fibrous tissues, which makes
the lumen mechanisms
Breathing of arteries narrower.
vary based on habitat and
Angina: It is also
organizational called
levels ‘angina pectoris’. A symptom of acute chest pain appears
in animals.
when no
Lower enough oxygen
invertebrates is reaching
(sponges, the heart
coelenterates, muscle. Angina can occur in men
flatworms)
and women
exchange of any
oxygen andage but itdioxide
carbon is morethrough
commonsimple
among the middle-aged and
elderly. It occurs due to conditions
diffusion over their body surface. that affect the blood flow.
Heart Failure:
Earthworms useHeart
a moist failure means
cuticle, and the statehave
insects of heart when it is not pumping
tracheal
blood for
tubes effectively enough
transporting to meet theair.
atmospheric needs of the body. It is sometimes called
congestive
Aquatic heart failure
arthropods and because
molluskscongestion of the lungs is one of the main
use gills (branchial
symptoms ofwhile
respiration), this disease.
terrestrial Heart failure
forms is not(pulmonary
use lungs the same as cardiac arrest (when
the heart stops beating) or a heart attack (when the heart muscle is suddenly
respiration).
damaged byexhibit
Vertebrates an inadequate
differentblood supply).methods: fishes
respiratory
use gills, and amphibians, reptiles, birds, and mammals
respire through lungs.
Amphibians like frogs can also respire through their moist
skin (cutaneous respiration).
Nasal chamber connects to pharynx, a common passage for food and air.
Pharynx leads to larynx (a cartilaginous box for sound production),hence called
the sound box
Epiglottis covers glottis during swallowing to prevent food entry into the larynx
Trachea is a straight tube dividing into right and left primary bronchi at the 5th
thoracic vertebra.
EXCRETORY PRODUCTS
AND THEIR ELIMINATION
URINE FORMATION
Glomerular filtration
First step in urine formation: Glomerular filtration by the glomerulus.
Approximately 1/5th of heart ventricle output (1100-1200 ml/min) filtered by kidneys.
Glomerular capillary blood pressure drives filtration through three layers: endothelium,
Bowman’s capsule epithelium, and a basement membrane.
Bowman’s capsule epithelial cells (podocytes) have filtration slits, allowing
ultrafiltration.
Virtually all plasma constituents, excluding proteins, pass through, making it
ultrafiltration.
Glomerular filtration rate (GFR) represents the amount of kidney filtrate per minute.
In a healthy individual, GFR is around 125 ml/minute, equivalent to 180 liters daily
Kidneys possess self-regulating mechanisms for GFR, notably managed by the
juxtaglomerular apparatus (JGA).
JGA is a sensitive region at the junction of the distal convoluted tubule and afferent
arteriole.
A decrease in GFR can prompt JG cells to release renin, stimulating glomerular blood
flow and restoring GFR to normal.
Reabsorption
Daily filtrate volume: 180 liters; urine released: 1.5 liters, indicating 99% reabsorption
by renal tubules.
Reabsorption, performed by tubular epithelial cells, involves active (e.g., glucose, amino
acids, Na+) and passive (e.g., nitrogenous wastes, water) mechanisms.
Active reabsorption targets specific substances, while passive reabsorption, especially of
water, occurs in initial nephron segments.
Secretion
During urine formation, the tubular cells secrete substances like H+ , K+ and ammonia
into the filtrate.
Tubular secretion is also an important step in urine formation as it helps in the
maintenance of ionic and acid base balance of body fluids.
Henle’s Loop
Minimal reabsorption occurs in the ascending limb.
The ascending limb maintains high osmolarity in the medullary interstitial fluid.
The descending limb is water-permeable but almost impermeable to electrolytes,
concentrating the filtrate downward.
The ascending limb, impermeable to water, actively or passively transports electrolytes.
As the concentrated filtrate moves upward, it gets diluted due to the passage of
electrolytes to the medullary fluid
Distal Convoluted Tubule (DCT)
DCT facilitates conditional reabsorption of Na+ and water.
Capable of reabsorbing HCO3 – and selectively secreting hydrogen, potassium ions, and
NH3.
Maintains blood pH and sodium-potassium balance
Collecting Duct
Long duct from kidney cortex to medulla.
Enables significant water reabsorption for concentrated urine.
Allows urea passage into medullary interstitium for osmolarity.
Plays a role in pH and ionic balance by selectively secreting H+ and K+ ions.
MECHANISM OF CONCENTRATION OF THE FILTRATE
Mammals can produce concentrated urine, with Henle’s loop and vasa recta playing
a crucial role.
Filtrate flows in opposite directions in the two limbs of Henle’s loop, creating a
counter-current.
Vasa recta also has a counter-current flow pattern.
Proximity between Henle’s loop and vasa recta, along with the counter-current,
maintains increasing osmolarity from cortex (300 mOsmolL-1 ) to inner medulla (1200
mOsmolL-1).
The osmolarity gradient is mainly due to NaCl and urea transport.
NaCl is exchanged between the ascending limb of Henle’s loop and descending limb
of vasa recta.
JGA
Juxtaglomerular apparatus (JGA) has a regulatory role.
Decrease in glomerular blood flow/pressure/GFR activates JG cells to release renin.
Renin converts angiotensinogen to angiotensin I and then angiotensin II.
Angiotensin II acts as a potent vasoconstrictor, raising glomerular blood pressure and
GFR.
Angiotensin II stimulates the adrenal cortex to release Aldosterone.
Aldosterone promotes Na+ and water reabsorption from distal tubules, increasing blood
pressure and GFR.
Overall mechanism known as the Renin-Angiotensin system
Heart
Increased blood flow to the atria triggers Atrial Natriuretic Factor (ANF) release.
ANF induces vasodilation, reducing blood pressure.
ANF mechanism serves as a counterbalance to the renin-angiotensin mechanism.
MICTURITION
Nephrons form urine, which is then stored in the urinary bladder until a signal from
the central nervous system (CNS) triggers micturition.
Stretch receptors in the bladder walls send signals to the CNS, initiating the
contraction of bladder muscles and relaxation of the urethral sphincter, leading to
urine release.
The process of release of urine is known as micturition, and the associated neural
mechanisms constitute the micturition reflex.
Adults excrete an average of 1 to 1.5 liters of slightly acidic (pH-6.0) yellowish urine per
day, with an average of 25-30 grams of urea.
Urine characteristics can be affected by various conditions, and its analysis aids in
diagnosing metabolic disorders and kidney malfunctions. Example-
Presence of glucose (Glycosuria) and ketone bodies (Ketonuria) in urine may indicate
diabetes mellitus
Kidney malfunction can cause urea accumulation, leading to harmful uremia and
potential kidney failure.
Hemodialysis is a process to remove urea, where blood is pumped into an artificial
kidney containing a cellophane tube with a dialysing fluid.
The tube's porous cellophane membrane allows the passage of molecules based on
concentration gradient, effectively clearing the blood.
The cleared blood, after adding anti-heparin, is returned to the body through a
vein, benefitting uremic patients worldwide.
Kidney transplantation, involving a functioning kidney from a donor (preferably a
close relative), is a definitive solution for acute renal failures, with modern clinical
procedures enhancing success rates.
Renal calculi refer to crystallized salts forming kidney stones, while
glomerulonephritis denotes inflammation of kidney glomeruli.
LOCOMOTION AND
MOVEMENT
TYPES OF MOVEMENT
Human body exhibit three main types of movements
Amoeboid
Specialized cells like macrophages and leukocytes display amoeboid movement.
Amoeboid movement is facilitated by pseudopodia formed through protoplasm
streaming, similar to Amoeba.
Cytoskeletal elements, including microfilaments, play a role in amoeboid movement.
Ciliary
Ciliary movement is common in tubular organs with ciliated epithelium.
Coordinated cilia movements in the trachea aid in dust and foreign particle removal
from inhaled air.
Ciliary movement facilitates the passage of ova through the female reproductive tract.
Muscular
Limb, jaw, and tongue movements rely on muscular activity.
Muscles' contractile property is crucial for locomotion and various movements.
Human beings and most multicellular organisms utilize muscle contraction for
coordinated locomotion.
Effective locomotion demands coordination among muscular, skeletal, and neural
systems.
MUSCLE
Classification of muscles
Visceral muscles
Visceral muscles: Inner walls of hollow visceral organs (e.g., alimentary canal,
reproductive tract).
Nonstriated appearance: Smooth muscles without striations.
Involuntary control: Activities not under voluntary nervous system control.
Function: Assist in activities like food transportation in the digestive tract and
gamete movement in the genital tract
Cardiac muscles
Cardiac muscles constitute the heart muscle.
These muscles form a complex, branching pattern.
Appearance-wise, cardiac muscles exhibit striations.
They operate involuntarily, without direct control from the nervous system
Skeletal muscles
Skeletal muscles are intricately linked with the body's skeletal structure, exhibiting a
distinctive striped appearance under the microscope, earning them the name "striated
muscles."
Governed by the voluntary control of the nervous system, these muscles are
appropriately termed voluntary muscles.
Primarily dedicated to locomotory actions and alterations in body postures, skeletal
muscles play a key role in facilitating movement and maintaining body positions
Skeletal muscles in the body are composed of organized muscle bundles or fascicles
held together by fascia, a collagenous connective tissue layer.
Each muscle bundle comprises multiple muscle fibers.
Sarcolemma is the plasma membrane surrounding each muscle fiber.
Muscle fiber is a syncytium with multiple nuclei within the sarcoplasm.
Sarcoplasmic reticulum, part of the endoplasmic reticulum, acts as a calcium ion
store.
Myofibrils, or myofilaments, are numerous parallel filaments in the sarcoplasm.
Each myofibril exhibits alternating dark and light bands.
Striated appearance results from the distribution pattern of two key proteins:
Actin and Myosin.
Light bands (I-band) consist of actin, while dark bands (A-band) contain myosin,
forming rod-like structures parallel to myofibrils.
Actin filaments are thinner (thin filaments), and myosin filaments are thicker
(thick filaments).
The 'I' band has a central elastic fiber called the 'Z' line to which thin filaments
are firmly attached.
A sarcomere
Structure of Contractile Proteins
Actin
Each thin filament comprises two helically wound filamentous (F) actins, with each F
actin being a polymer of globular (G) actins.
Tropomyosin, forming two filaments, runs alongside F actins, and troponin, a complex
protein, is distributed at regular intervals on tropomyosin.
In the resting state, a troponin subunit masks active binding sites for myosin on
actin filaments
Myosin
Each thick filament (myosin) is a polymerized protein consisting of many monomeric
proteins called Meromyosins.
Meromyosins include a globular head with a short arm (heavy meromyosin - HMM)
and a tail (light meromyosin - LMM).
The HMM component projects outward at regular intervals, forming a cross arm with
active ATPase enzyme, ATP binding sites, and active sites for actin.
Muscle contraction is explained by the sliding filament theory, where muscle fibers
contract through the sliding of thin filaments over thick filaments.
Initiation
Signal from CNS via motor neuron.
Motor neuron and connected muscle fibers form a motor unit.
Neuromuscular Junction
Junction between motor neuron and sarcolemma.
Release of neurotransmitter (Acetyl choline).
Generation of action potential in sarcolemma.
Contraction
Myosin pulls attached actin filaments towards the center of 'A' band.
'Z' line attached to actins is pulled inwards.
Shortening of sarcomere.
Relaxation
Myosin releases ADP and P1, returning to relaxed state.
ATP binds, breaking the cross bridge.
Myosin hydrolyzes ATP, repeating the cross bridge cycle.
Stages in cross bridge formation, rotation of head and breaking of cross bridge
Sliding-filament
theory of muscle
contraction
(movement of the
thin filaments and
the relative size of
the I band and H
zones
SKELETAL SYSTEM
In humans, the skeletal system comprises 206 bones and a few cartilages.
It is categorized into two main divisions: the axial and the appendicular skeleton.
Axial Skeleton
Structure Bone included No. Name of bones Feature
Frontal -1 Form the hard protective
Occipital-1 outer covering, cranium for
Ethmoid-1 the brain
Cranium 8 Sphenoid-1 Skull region articulates with
Parietal-2 the superior region of the
Temporal-2 vertebral column with the
help of two occipital
condyles (dicondylic skull).
Nasal-2 From front part of skull
Skull Mandible-2
Facial 14 Lacrimal-2
Maxilla-2
Zygomatic-2
Human Skull
Ribs and rib cage Vertebral column
Appendicular skeleton
The appendicular skeleton comprises limb bones and their girdles.
Each limb consists of 30 bones,
For hand - humerus, radius, ulna, carpals (8), metacarpals (5), and phalanges (14).
For leg -femur, tibia, fibula, tarsals (7), metatarsals (5), and phalanges (14) form the
leg bones.
The patella covers the knee ventrally.
Pectoral and pelvic girdle bones connect upper and lower limbs to the axial skeleton.
Each half of the pectoral girdle has a clavicle and a scapula.
Scapula, a large triangular flat bone, has a ridge (spine) and an acromion.
The clavicle articulates with the acromion, forming the shoulder joint.
The clavicle is known as the collar bone, characterized by two curvatures
Right pectoral girdle and upper arm Right pelvic girdle and lower limb bones
JOINTS
Joints are crucial for body movements, serving as connections between bones or bones
and cartilages.
Muscles generate force to enable movement through joints, acting as fulcrums.
Joint mobility varies based on multiple factors.
There are three main structural forms of joints: fibrous, cartilaginous, and synovial
Nerve fibers don't reach all body cells, necessitating continuous regulation of
cellular functions.
Hormones play a crucial role in this coordination, providing a unique form of
integration.
The neural and endocrine systems work together to effectively regulate
physiological functions in the body.
In addition to these, some other organs, e.g., gastrointestinal tract, liver, kidney,
heart also produce hormones.
The Hypothalamus
Types of hormones
Thyroid Gland
Thyroid gland: Two lobes on either side of the trachea, connected by isthmus.
Composition: Follicles and stromal tissues.
Follicular cells synthesise two hormones: Synthesize hormones T4 (thyroxine)
and T3 (triiodothyronine).
Iodine importance: Essential for normal hormone synthesis.
Thyroid gland: Two lobes on either side of the trachea, connected by isthmus.
Composition: Follicles and stromal tissues.
Follicular cells synthesise two hormones: Synthesize hormones T4 (thyroxine)
and T3 (triiodothyronine).
Iodine importance: Essential for normal hormone synthesis.
Iodine deficiency: Leads to hypothyroidism and goitre.
Hypothyroidism during pregnancy: Causes cretinism, mental retardation
(cretinism), stunted growth,low intelligence quotient, abnormal skin, deaf-
mutism, etc.
Hypothyroidism in adult women: Irregular menstrual cycles.
Hyperthyroidism: Increased synthesis due to cancer or nodules, affects body
physiology.
Exopthalmic goitre (Graves' disease): Form of hyperthyroidism with enlarged
gland, protruding eyeballs, increased metabolic rate, weight loss.
Thyroid hormones' roles: Regulate basal metabolic rate, support red blood cell
formation, control carbohydrate, protein, and fat metabolism.
Water and electrolyte balance: Influenced by thyroid hormones.
Thyrocalcitonin (TCT): Protein hormone regulating blood calcium levels.
Diagrammatic view
of the position of
Thyroid (Ventral
side)
Parathyroid Gland
Thymus
Our body has one pair of adrenal glands, one at the anterior part of each kidney
Adrenal Gland
Pancreas
Testis
Classification of hormones
Coordination is the process through which two or more organs interact and
complement the functions of one another.
The neural system provides an organised network of point-to-point connections
for a quick coordination. The endocrine system provides chemical integration
through hormones
NEURAL SYSTEM
Neuron
Based on the number of axon and dendrites, the neurons are divided into three
types
Axon
Myelinated Non-myelinated
The gaps between two adjacent myelin sheaths are called nodes of Ranvier.
The myelinated nerve fibres are enveloped
with Schwann cells, which form a myelin
sheath around the axon
Myelinated nerve fibres are found in spinal
and cranial nerves. Unmyelinated nerve fibre
is enclosed by a Schwann cell that does not
form a myelin sheath around the axon, and
is commonly found in autonomous and the
somatic neural systems
Transmission of Impulses
Synapses
Electrical synapses
Membranes of pre- and post-synaptic
neurons are closely adjacent.
Direct flow of electrical current
occurs between neurons.
Resembles impulse conduction along a
single axon.
Impulse transmission is notably swift
compared to chemical synapses.
Uncommon in our system Diagram showing axon terminal and
synapse
Chemical synapses
Membranes of pre- and post-synaptic neurons are closely adjacent.
Direct flow of electrical current occurs between neurons.
Resembles impulse conduction along a single axon.
Impulse transmission is notably swift compared to chemical synapses.
Uncommon in our system
The brain is the central information processing organ of our body, and acts as
the ‘command and control system’
The human brain, responsible for functions like hearing, speech, memory,
intelligence, emotions, and thoughts, is securely encased within the protective
skull.
Within the skull, the brain is shielded by cranial meninges, comprising the
outer layer known as dura mater, a delicate middle layer termed arachnoid,
and an inner layer (in direct contact with the brain tissue) named pia mater
Brain
Forebrain
Forebrain
Cerebrum, the major part of the human brain, is divided into left and right
cerebral hemispheres by a deep cleft.
The hemispheres are connected by the corpus callosum, a tract of nerve fibers.
The cerebral cortex, covering the hemispheres, is characterized by prominent
folds and is referred to as the grey matter due to its neuron cell bodies
Motor areas, sensory areas, and association areas (responsible for complex
functions like memory and communication) are present in the cerebral cortex.
The inner part of the cerebral hemisphere, composed of myelin-sheathed tracts, is
called the white matter.
The cerebrum wraps around the thalamus, a key coordinating center for sensory
and motor signaling.
The hypothalamus, situated at the thalamus base, regulates body temperature,
hunger, and thirst, and secretes hypothalamic hormones.
The limbic lobe, comprising inner parts of cerebral hemispheres and structures like
amygdala and hippocampus, along with the hypothalamus, forms the limbic
system.
The limbic system is involved in regulating sexual behavior, expressing emotional
reactions, and motivation.
Midbrain
Midbrain, positioned between the forebrain's thalamus/hypothalamus and the
hindbrain's pons.
Contains the cerebral aqueduct.
Dorsal part features four prominent round swellings known as corpora
quadrigemina
Hindbrain
Hindbrain
Cerebellum
Cerebellum has very convoluted surface in order to provide the additional space
for many more neurons
Medulla
Also called the medulla oblongata
The medulla of the brain is connected to the spinal cord. The medulla contains
centres which control respiration, cardiovascular reflexes and gastric secretions.
Three major regions make up the brain stem; mid brain, pons and medulla
oblongata. Brain stem forms the connections between the brain and spinal cord