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Stereochemistry
Stereochemistry
A Three-Dimensional Insight
ANIL V. KARNIK
Department of Chemistry, University of Mumbai,
Mumbai, Maharashtra, India
MOHAMMED HASAN
Department of Chemistry, University of Mumbai,
Mumbai, Maharashtra, India
Elsevier
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ISBN: 978-0-12-821062-8
v
vi Contents
xvii
Foreword
xix
xx Foreword
chemist deals with. This has been presented with recent and more rele-
vant examples. The expanse of asymmetric synthesis cannot be covered in
a textbook of this type. But the idea about the important approaches pos-
sible has been well-illustrated as a part of the foundation towards planning
asymmetric synthesis.
The significant use of chiral analytical chemistry is increasing in aca-
demic institutes and the pharmaceutical industry. The fundamentals of
enantiomer composition analysis have been provided in sufficient detail.
Many research laboratories report binding constants in supramolecular
interactions as a part of chiral supramolecular studies, these methods have
been illustrated adequately, which should be helpful to research students
as well.
Pericyclic reactions present a rather different type of approach in
organic synthesis. Basic stereoselectivity principles of pericyclic reactions
have been presented with helpful figures. The importance of coefficients
of molecular orbitals, in governing product selectivity or the effect of sub-
stituents on energies of Highest energy electron Occupied Molecular
Orbital Lowest energy electron Unoccupied Molecular Orbital and
hence the rates of D A reactions, have been discussed, which usually is
lacking in pericyclic topic presented in stereochemistry textbooks.
Chapter 4, Chiroptical properties: Origin and applications on chiropti-
cal properties also discusses many aspects which generally do not find a
place in stereochemistry textbooks. The origin of optical activity, the cir-
cular birefringence or the circular dichroism have been presented in an
effective manner. Discussion on conformationally crowded molecules
with twisted chromophores, inherently dissymmetric chromophores, exhi-
biting high optical rotations should be interesting to the earnest student of
the subject.
All the chapters provide relevant references of original articles, reviews,
and some specialised books on the topic. The present textbook on stereo-
chemistry presents all essential and important concepts with clarity and
provides up-to-date information on almost all aspects of stereochemistry
for undergraduate and graduate students of chemistry. It becomes apparent
that the book has the basic objective of bringing the subject clarity, with-
out compromising on the most essential concepts, but avoiding less-
frequently encountered components. This book should be successful in
developing ‘fondness’ for stereochemistry amongst the student commu-
nity. It should be useful to the chemistry academic faculty and industrial
Foreword xxi
xxiii
xxiv Preface
Figure 1.1 Opposite sequence of fingers in the left and the right hand.
under the domain of quantum mechanics, however for the present discussion
on stereochemistry, we will use various structural parameters qualitatively,
without reference to the quantum mechanics. For a thermodynamically
stable molecular geometry, few factors such as van der Waals’ radius, bond
length, bond angle, dihedral angle; play important role, besides other addi-
tional effects including resonance, hydrogen bonding etc.
Figure 1.2 Variation of potential energy as a function of distance between two simi-
lar non-bonded atoms.
Basic concepts of structure and stereochemistry 7
Figure 1.3 Bond angle between X and Y atoms connected to a common Z atom.
Figure 1.4 Bond angle and deviation observed in sp3 hybridised carbon compounds.
dumbbell shaped 2p atomic orbitals of the same carbon. The bond angle
for a sp3 hybridised carbon, in methane, is 109.5 degrees, the shape of this
tetra-substituted carbon compound is tetrahedral. The bond angle is subject
to change slightly for the same hybridisation state depending on the substi-
tution pattern. Some aspects such as steric crowding, dipolar attraction or
repulsion and conformational constraint due to cyclic geometry, are known
to cause deviation from the ideal bond angle in a given hybridised state of
an atom. For example, the bond angle between two hydrogens becomes
107 degrees at C2 of propane, due to the larger space used by two terminal
methyl groups. Three types of bond angles are found in dibromomethane:
Br C Br 5 112.9 degrees; H C Br 5 108.3 degrees; and the H C H 5
110.9 degrees. In cyclopropane, the bond angles are drastically altered with
C C C bond angle being 60 degrees only, making it highly bent and
strained bond. Fig. 1.4 shows the deviation of idealised bond angle due to
crowding and cyclic strains. Any large deviation from the ideal bond angle of
specific hybridisation causes certain strain in the molecule. The common bond
angles in different hybridization states, for carbon, oxygen and nitrogen are
shown in Table 1.2.
Table 1.2 Some common hybridization states in organic chemistry with associated
bond angles and shapes.
Hybridisation state and Bond angle (degrees) Geometry
element/structural unit
sp3 (carbon) 109.5 Tetrahedral
sp2 (carbon) 120 Planar, triagonal
sp (carbon) 180 Linear
sp3 (oxygen) 104.5 Tetrahedral
sp3 (nitrogen) 107.3 Tetrahedral
Figure 1.5 Dihedral angle between C1 X and C2 Y viewed along C1 C2 bond (the
dark thick line represents the bond whereas dashed line represents the plane).
defines the angle between the groups attached to adjacent (C1 and C2)
carbon atoms. Thus, it is the angle between the plane containing C1 X
unit and the other plane containing C2 Y unit, with C1 bonded to C2
carbon atom. The dihedral angle can be better viewed with the help of
Newman’s projection formula, with C1 at the centre of the first circle and
C2 is at the back, not visible and C1 and C2 are joined to X and Y respec-
tively, as shown below in Fig. 1.5. The rotation of C1 C2 bond results in
change in position of the planes (X C1 C2 and Y C2 C1) and thus a
change in dihedral angle is observed. The change in dihedral angle gener-
ates several conformations in a molecule.
1.4 Isomers
Isomers are chemical species (ion or molecules) displaying different physical
and/or chemical properties, though having same molecular formulae and
hence the same molecular weights. When isomers have different bond con-
nectivity then they are referred to as ‘constitutional isomers’ or
10 Stereochemistry
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