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a-TERTIARY AMINES EN ROUTE
TO NATURAL PRODUCTS
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VISUAL GUIDES TO NATURAL PRODUCT
SYNTHESIS SERIES
a-TERTIARY
AMINES EN
ROUTE TO
NATURAL
PRODUCTS
ABDUL HAMEED
MARIYA AL-RASHIDA
MUHAMMAD RAZA SHAH
Elsevier
Radarweg 29, PO Box 211, 1000 AE Amsterdam, Netherlands
The Boulevard, Langford Lane, Kidlington, Oxford OX5 1GB, United Kingdom
50 Hampshire Street, 5th Floor, Cambridge, MA 02139, United States
Notices
Knowledge and best practice in this field are constantly changing. As new research and
experience broaden our understanding, changes in research methods, professional practices, or
medical treatment may become necessary.
Practitioners and researchers must always rely on their own experience and knowledge in
evaluating and using any information, methods, compounds, or experiments described herein.
In using such information or methods they should be mindful of their own safety and the safety
of others, including parties for whom they have a professional responsibility.
To the fullest extent of the law, neither the Publisher nor the authors, contributors, or editors,
assume any liability for any injury and/or damage to persons or property as a matter of products
liability, negligence or otherwise, or from any use or operation of any methods, products,
instructions, or ideas contained in the material herein.
Library of Congress Cataloging-in-Publication Data
A catalog record for this book is available from the Library of Congress
British Library Cataloguing-in-Publication Data
A catalogue record for this book is available from the British Library
ISBN: 978-0-12-822262-1
Preface xi
2. Altemicidin 5
2.1 Abstract 5
2.2 Kende’s first total ()-altemicidin synthesis 6
2.3 Kan’s approach toward altemicidin Bicyclo[3.3.0]
framework (2008) 7
2.4 Kan’s total synthesis of SB-203207: an altemicidin’s
analogue (2014) 8
2.5 Hayakawa’s studies toward altemicidin’s analogue (SB-203207) 9
References 10
3. Amathaspiramides AeF 11
3.1 Abstract 11
3.2 Trauner’s first total synthesis of ()-amathaspiramide F (2002) 11
3.3 Ohfune’s ()-total synthesis of ()-amathaspiramide F (2008) 13
3.4 Fukuyama’s total syntheses of ()-amathaspiramides (2012) 13
3.5 Tambar’s formal synthesis of ()-amathaspiramide F (2013) 13
3.6 Lee’s synthesis of amathaspiramide C (2015) 15
3.7 Sun’s synthesis of amathaspiramides B, D, and F (2016) 15
3.8 Kim’s synthesis of ()-amathaspiramide F (2018) 15
References 18
4. Cephalotaxine 19
4.1 Abstract 19
4.2 Biosynthesis 20
4.3 Weinreb’s first total ()-cephalotaxine synthesis (1975) 20
4.4 Semmelhack’s total synthesis of cephalotaxine (1975) 20
4.5 Hanaoka’s first-generation ()-total synthesis (1986) 21
4.6 Hanaoka’s second-generation formal synthesis (1988) 22
4.7 Kuehne’s total synthesis (1988) 22
4.8 Fuchs’s total synthesis of ()-cephalotaxine (1988) 23
v
vi Contents
5. Kaitocephalin 67
5.1 Abstract 67
5.2 Kitahara’s total synthesis (2002) 68
5.3 Kitahara’s total synthesis (2002) 68
5.4 Ohfune’s total enantioselective synthesis (2005) 68
Contents vii
6. Lactacystin 81
6.1 Abstract 81
6.2 Biosynthesis of lactacystin 82
6.3 Corey’s first total synthesis of (þ)-lactacystin (1992) 83
6.4 Corey’s revised synthesis (1998) 83
6.5 Corey’s second-generation synthesis (1998) 83
6.6 Corey’s synthesis of a-methylomuralide (2003) 83
6.7 Smith-Õmura’s (þ)-total synthesis (1993/1996) 83
6.8 Baldwin’s (þ)-total synthesis (1994) 84
6.9 Chida’s (þ)-total synthesis (1997) 84
6.10 Kang’s formal synthesis (1998) 85
6.11 Adams clasto-lactacystin synthesis (1999) 85
6.12 Panek Total Synthesis (1999) 85
6.13 Ohfune synthesis (2000) 86
6.14 Pattenden’s formal synthesis (2003) 86
6.15 Hatakeyama’s total synthesis (2004) 87
6.16 Donohoe’s racemic synthesis (2004) 87
6.17 Wardrop’s formal synthesis (2005) 87
6.18 Jacobsen’s total synthesis (2006) 87
6.19 Shibasaki’s total synthesis (2006) 88
6.20 Hayes’s total synthesis via 1,5-CH insertion (2008) 88
6.21 Hayes’s formal synthesis (2010) 89
6.22 Silverman’s total synthesis (2011) 89
6.23 Inoue’s total synthesis (2015) 89
6.24 Chandrasekhar’s formal synthesis (2019) 90
6.25 Page’s formal synthesis (2019) 90
6.26 Poisson’s ()-omuralide synthesis (2019) 90
References 102
7. Salinosporamide A 105
7.1 Abstract 105
7.2 Corey’s first total synthesis of salinosporamide A (2004) 106
7.3 Second-generation improved synthesis (2005) 107
7.4 Danishefsky enantioselective synthesis (2005) 108
7.5 Pattenden racemic synthesis (2006) 109
7.6 Lam’s formal synthesis (2008) 109
viii Contents
8. Manzacidins 119
8.1 Ohfune’s total synthesis of manzacidin
A and C (2000) 120
8.2 Du Bois’ enantioselective manzacidins
A and C syntheses (2002) 121
8.3 Mackay’s ()-manzacidin D synthesis (2004) 122
8.4 Lanter’s manzacidin C synthesis (2005) 122
8.5 Maruoka’s manzacidins A synthesis (2005) 123
8.6 Deng’s formal synthesis of manzacidin A via tandem conjugate
additioneprotonation (2006) 124
8.7 Sibi’s manzacidin A synthesis (2007) 125
8.8 Ohfune’s synthesis of manzacidin B (2007) 125
8.9 Leighton’s manzacidin C synthesis (2008) 127
8.10 Ohfune’s manzacidins A and C synthesis (2008) 128
8.11 Mohapatra’s synthesis of manzacidin B (2012) 129
8.12 Ohfune’s synthesis of manzacidin B (2012) 130
8.13 Kawabata’s manzacidin A synthesis (2013) 131
8.14 Ichikawa’s manzacidins A and C synthesis (2012) 132
8.15 Inoue’s manzacidin A synthesis (2015) 133
8.16 Sakakura’s synthesis of mazacidins A and C (2017) 134
8.17 Ukaji’s formal synthesis of manzacidin (2017) 135
8.18 Renata’s formal synthesis of manzacidin C (2018) 136
References 136
9. Neooxazolomycin 139
9.1 Kende’s first enantioselective total neooxazolomycin
synthesis (1990) 140
9.2 Hatakeyama‘s total neooxazolomycin synthesis (2007) 141
9.3 Hatakeyama‘s total oxazolomycin synthesis (2011) 142
9.4 Pattenden’s approach toward oxazolomycin A and
neooxazolomycin synthesis (2007) 143
9.5 Moloney’s approach toward oxazolomycin (2002) 144
9.6 Taylor’s formal synthesis of (þ)-neooxazolomycin (2011) 145
9.7 Mohapatra‘s approach toward oxazolomycin (2006) 146
9.8 Donohoe‘s approach toward pyrrolidinone core of
oxazolomycin A (2012) 147
References 148
Contents ix
Index 223
Preface
xi
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C H A P T E R
1
Natural products with a-tertiary
amine
1.1 Abstract
O
O
SO2NH2
HHN CO H O
Me 2 N R A B
C N
N N D
OH H O
OH H E
H O
Br HO
O NH2 OMe
Br Amathaspiramides Cephalotaxine
Altemicidin
Cl Cl
HO OH O
H CO2H O
N OH O N
Cl NH2 O H OH
H N N S NHAc
O CO2H H H H
HO CO2H O
CO2H
Kaitocephalin Lactacystin
Salinosporamide A
Br O
HN N
H2N CO2H HO
O 5 H OO
N 4 CO2H HO2C H2N N
H OH
O OH ACPD N
Manzacidin B H HO
OH
Tetrodotoxin OH
O
N
O
OH OH O
O
OH OH
O O
OH NH2 R
N
R = Me, CH2OH HO N
H HO
OH O
Sphingofungins Neooxazolomycin
OMe
N
HO NHMe N
N O
R
H
O O
HCl
(HO)2P O R = H, TAN1251A
(–)-FR901483 R = OH, TAN1251B
References
1. (a) Mailyan, A. K.; Eickhoff, J. A.; Minakova, A. S.; Gu, Z.; Lu, P.; Zakarian, A. Cutting-
Edge and Time-Honored Strategies for Stereoselective Construction of CeN Bonds in
Total Synthesis. Chem. Rev. 2016, 116, 4441e4557.
(b) Kang, S. H.; Kang, S. Y.; Lee, H.-S.; Buglass, A. J. Total Synthesis of Natural Tert-Alky-
lamino Hydroxy Carboxylic Acids. Chem. Rev. 2005, 105, 4537e4558.
2. Ohfune, Y.; Shinada, T. Enantio and Diastereoselective Construction of a, a-disubstituted
a-amino Acids for the Synthesis of Biologically Active Compounds. Eur. J. Org Chem.
2005, 2005, 5127e5143.
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C H A P T E R
2
Altemicidin
2.1 Abstract
References
1. Takahashi, A.; Kurasawa, S.; Ikeda, D.; Okami, Y.; Takeuchi, T. Altemicidin, a New Acar-
icidal and Antitumor Substance. J. Antibiot. 1989, 42, 1556e1561.
2. (a) Banwell, M. G.; Crasto, C. F.; Easton, C. J.; Forrest, A. K.; Karoli, T.; March, D. R.;
Mensah, L.; Nairn, M. R.; O’Hanlon, P. J.; Oldham, M. D. Analogues of SB-203207 as
Inhibitors of tRNA Synthetases. Bioorg. Med. Chem. Lett 2000, 10, 2263e2266.
(b) Houge-Frydrych, C. S. V.; Gilpin, M. L.; Skett, P. W.; Tyler, J. W. SB-203207 and
SB-203208, Two Novel Isoleucyl tRNA Synthetase Inhibitors from a Streptomyces Sp.
J. Antibiot. 2000, 53, 364e372.
3. (a) Kende, A. S.; Liu, K.; Jos Brands, K. Total Synthesis of (-)-Altemicidin: A Novel
Exploitation of the Potier-Polonovski Rearrangement. J. Am. Chem. Soc. 1995, 117,
10597e10598. and references therein.
(b) Kende, A. S.; Brands, K.; Blass, B. A Novel Dyatropic Rearrangement of g-N,N-diben-
zylamino a,b-dehydro N-Formylamino Acid Esters. Tetrahedron Lett. 1993, 34, 579e582.
4. Kan, T.; Kawamoto, Y.; Asakawa, T.; Furuta, T.; Fukuyama, T. Synthetic Studies on
Altemicidin: Stereocontrolled Construction of the Core Framework. Org. Lett. 2008, 10,
169e171. and references therein.
(i) Kan, T.; Inoue, T.; Kawamoto, Y.; Yonehara, M.; Fukuyama, T. A Novel Synthesis of
Bicyclo [3.3.0] Octane Ring System via a Desymmetric CH Insertion Reaction. Synlett
2006, 1583e1585, 2006.
5. Hirooka, Y.; Ikeuchi, K.; Kawamoto, Y.; Akao, Y.; Furuta, T.; Asakawa, T.; Inai, M.;
Wakimoto, T.; Fukuyama, T.; Kan, T. Enantioselective Synthesis of SB-203207. Org. Lett.
2014, 16, 1646e1649.
6. Hayakawa, I.; Nagayasu, A.; Sakakura, A. Toward the Synthesis of SB-203207: Construc-
tion of Four Contiguous Nitrogen-Containing Stereogenic Centers. J. Org. Chem. 2019, 84,
15614e15623.
C H A P T E R
3
Amathaspiramides AeF
3.1 Abstract
I
OMOM a) PhSNH-tBu
OH
OH OH NCS; b) (+)-DIP-Cl
-40 °C, 70% (2 steps) TBS
TBS TBS
PdCl2(PPh3)2
CuI, 73%
MOMO
MOMO
a) PdCl2(PPh3)2, nBu3SnH
BCl
b) AcOH, MeOH
(+)-DIP-Cl = c) Boc-homoallylglycine
2 EDCI, DMAP,
59% (3 steps)
a) OsO4, NMO
O
b) NaIO4; c) NaBH3CN
d) p-TsOH; e) TFAA MeO2C NHBoc i) LDA (4 equiv)
O
f) Ozonlysis ZnCl2 (1.2 equiv)
g) MeN(TMS)2 THF, -78 °C to RT NH
Boc
20% (7 steps) TBS ii) then CH2N2, 88%
TBS
O CF3 MOMO Claisen rearrangement OMOM
erythro/threo (dr = 7:1)
O N
Me N a) nBu4NBrCl2
b) MeI, K2CO3
HO c) LiBH4,
HO 53% (3 steps)
(-)-Amathaspiramide F
Path I OTBS
Br Br
MeO2C
MeO MeO
Br
MeO a) LDA, MePh2SiCl
b) LDA, Aldehyde, Br Br
MeO2C Li TMS MeO2C
Br
TMS
-78 oC; HCl; c) TsCl N2 -78 oC
Aldehyde O N N
[3+2] Cycloaddition
OTs
Path II
d) TsOH; e) HCO2H
Br Br
f) PPh3, DIAD
MeO MeO
g) DIBAL, -78 oC
13% (7 steps)
Br Br
MeO2C Li TMS O Total Amathaspiramide C
-78 oC Steps = 7
N2 N N
H Overall Yield = 13%
O Me
CO2Et Amathaspiramide C
[3+2] Cycloaddition Br
a) p-TsOH, 95%
Br Br b) HOOH, 66% MeO
MeO MeO c) MeOH, DBAD,
PS-PPh3, Br
sonication, 58%.
Br Br O
MeO2C MeO2C
SiMe3 N N
SiMe3 Steps H
N N N N Fukuyama's route (2012) O Me
Li O Amathaspiramide A-F
OEt
O
having the property that any two arbitrarily chosen transformations of the
system, as
applied successively result in a transformation which also belongs to the
system, and which is therefore expressible in the form
where and are two real numbers, and denotes, for all the real
values of , a regular analytic uniform function. Such functions are
obtained in the simplest manner by means of trigonometrical series by a
process similar to that used by Borel (according to a recent
announcement of Picard)[13] for the construction of a doubly periodic, non-
analytic solution of a certain analytic partial differential equation.
[10] Lie-Engel, Theorie der Transformationsgruppen, vol. 3, Leipzig,
1893, §§ 82, 144.
[11] "Ueber den analytischen Charakter der eine endliche
Kontinuierliche Transformationsgruppen darstellenden Funktionen,"
Math. Annalen, vol. 41.
[12] Werke, vol. 1, pp. 1, 61, 389.
[13] "Quelques théories fondamentales dans l'analyse mathématique,"
Conférences faites à Clark University, Revue générale des Sciences,
1900, p. 22.
6. MATHEMATICAL TREATMENT OF
THE AXIOMS OF PHYSICS.
The investigations on the foundations of geometry suggest the
problem: To treat in the tame manner, by means of axioms, those
physical sciences in which mathematics plays an important part; in
the first rank are the theory of probabilities and mechanics.
As to the axioms of the theory of probabilities,[14] it seems to me
desirable that their logical investigation should be accompanied by a
rigorous and satisfactory development of the method of mean values
in mathematical physics, and in particular in the kinetic theory of
gases.
Important investigations by physicists on the foundations of
mechanics are at hand; I refer to the writings of Mach,[15] Hertz,[16]
Boltzmann[17] and Volkmann.[18] It is therefore very desirable that
the discussion of the foundations of mechanics be taken up by
mathematicians also. Thus Boltzmann's work on the principles of
mechanics suggests the problem of developing mathematically the
limiting processes, there merely indicated, which lead from the
atomistic view to the laws of motion of continua. Conversely one
might try to derive the laws of the motion of rigid bodies by a limiting
process from a system of axioms depending upon the idea of
continuously varying conditions of a material filling all space
continuously, these conditions being defined by parameters. For the
question as to the equivalence of different systems of axioms is
always of great theoretical interest.
If geometry is to serve as a model for the treatment of physical
axioms, we shall try first by a small number of axioms to include as
large a class as possible of physical phenomena, and then by
adjoining new axioms to arrive gradually at the more special
theories. At the same time Lie's a principle of subdivision can
perhaps be derived from profound theory of infinite transformation
groups. The mathematician will have also to take account not only of
those theories coming near to reality, but also, as in geometry, of all
logically possible theories. He must be always alert to obtain a
complete survey of all conclusions derivable from the system of
axioms assumed.
Further, the mathematician has the duty to test exactly in each
instance whether the new axioms are compatible with the previous
ones. The physicist, as his theories develop, often finds himself
forced by the results of his experiments to make new hypotheses,
while he depends, with respect to the compatibility of the new
hypotheses with the old axioms, solely upon these experiments or
upon a certain physical intuition, a practice which in the rigorously
logical building up of a theory is not admissible. The desired proof of
the compatibility of all assumptions seems to me also of importance,
because the effort to obtain such proof always forces us most
effectually to an exact formulation of the axioms.
all have the real part , except the well-known negative integral real
zeros. As soon as this proof has been successfully established, the
next problem would consist in testing more exactly Riemann's infinite
series for the number of primes below a given number and,
especially, to decide whether the difference between the number of
primes below a number and the integral logarithm of does in fact
become infinite of an order not greater than in .[21] Further, we
should determine whether the occasional condensation of prime
numbers which has been noticed in counting primes is really one to
those terms of Riemann's formula which depend upon the first
complex zeros of the function .
After an exhaustive discussion of Riemann's prime number
formula, perhaps we may sometime be in a position to attempt the
rigorous solution of Goldbach's problem,[22] viz., whether every
integer is expressible as the sum of two positive prime numbers; and
further to attack the well-known question, whether there are an
infinite number of pairs of prime numbers with the difference , or
even the more general problem, whether the linear diophantine
equation
where the sum extends over all ideals of the given realm and
denotes the norm of the ideal .
I may mention three more special problems in number theory:
one on the laws of reciprocity, one on diophantine equations, and a
third from the realm of quadratic forms.
[21] Cf. an article by H. von Koch, which is soon to appear in the
Math. Annalen [Vol. 55, p. 441].
[22] Cf. P. Stäckel: "Über Goldbach's empirisches Theorem,"
Nachrichten d. K. Ges. d. Wiss. zu Göttingen, 1896, and Landau,
ibid., 1900.
9. PROOF OF THE MOST GENERAL
LAW OF RECIPROCITY IN ANY
NUMBER FIELD.
For any field of numbers the law of reciprocity is to be proved for
the residues of the th power, when denotes an odd prime, and
further when is a power of or a power of an odd prime.
The law, as well as the means essential to its proof, will, I
believe, result by suitably generalizing the theory of the field of the
th roots of unity,[23] developed by me, and my theory of relative
quadratic fields.[24]
[23] Jahresber. d. Deutschen Math.-Vereinigung, "Ueber die
Theorie der algebraischen Zahlkörper," vol. 4 (1897), Part V.
[24] Math. Annalen, vol. 51 and Nachrichten d. K. Ges. d. Wiss.
zu Göttingen, 1898.
10. DETERMINATION OF THE
SOLVABILITY OF A DIOPHANTINE
EQUATION.
Given a diophantine equation with any number of unknown
quantities and with rational integral numerical coefficients: To devise
a process according to which it can be determined by a finite number
of operations whether the equation is solvable in rational integers.
11. QUADRATIC FORMS WITH ANY
ALGEBRAIC NUMERICAL
COEFFICIENTS.
Our present knowledge of the theory of quadratic number
fields[25] puts us in a position to attack successfully the theory of
quadratic forms with any number of variables and with any algebraic
numerical coefficients. This leads in particular to the interesting
problem: to solve a given quadratic equation with algebraic
numerical coefficients in any number of variables by integral or
fractional numbers belonging to the algebraic realm of rationality
determined by the coefficients.
The following important problem may form a transition to
algebra and the theory of functions:
[25] Hilbert, "Ueber den Dirichlet'schen biquadratischen
Zahlenkörper," Math. Annalen, vol. 45; "Ueber die Theorie der
relativquadratischen Zahlenkörper," Jahresber. d. Deutschen
Mathematiker-Vereinigung, 1897, and Math. Annalen, vol. 51;
"Ueber die Theorie der relativ-Abelschen Körper," Nachrichten d.
K. Ges. d. Wiss. zu Göttingen, 1898; Grundlagen der Geometrie,
Leipzig, 1899, Chap. VIII, § 83 [Translation by Townsend,
Chicago, 1902]. Cf. also the dissertation of G. Rückle, Göttingen,
1901.