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Acta Pharmaceutica Sinica B 2024;14(7):2795e2814

Chinese Pharmaceutical Association


Institute of Materia Medica, Chinese Academy of Medical Sciences

Acta Pharmaceutica Sinica B


w w w. e l s ev i e r. c o m / l o c a t e / a p s b
w w w. s c i e n c e d i r e c t . c o m

REVIEW

Monoclonal antibodies and aptamers: The


future therapeutics for Alzheimer’s disease
Alvaro Barrera-Ocampo*

Facultad de Ingenierı´a, Diseño y Ciencias Aplicadas, Departamento de Ciencias Farmace´uticas y Quı´micas, Grupo
Natura, Universidad Icesi, Cali 760031, Colombia

Received 6 February 2024; received in revised form 6 March 2024; accepted 14 March 2024

KEY WORDS Abstract Alzheimer’s disease (AD) is considered the most common and prevalent form of dementia of
adult-onset with characteristic progressive impairment in cognition and memory. The cure for AD has not
Ab;
been found yet and the treatments available until recently were only symptomatic. Regardless of multi-
Monoclonal antibody;
DNA aptamers;
disciplinary approaches and efforts made by pharmaceutical companies, it was only in the past two years
Cognitive impairment; that new drugs were approved for the treatment of the disease. Amyloid beta (Ab) immunotherapy is at
Alzheimer’s disease; the core of this therapy, which is one of the most innovative approaches looking to change the course of
Clinical trials; AD. This technology is based on synthetic peptides or monoclonal antibodies (mAb) to reduce Ab levels
Immunotherapy; in the brain and slow down the advance of neurodegeneration. Hence, this article reviews the state of the
Machine learning art about AD neuropathogenesis, the traditional pharmacologic treatment, as well as the modern active
and passive immunization describing approved drugs, and drug prototypes currently under investigation
in different clinical trials. In addition, future perspectives on immunotherapeutic strategies for AD and the
rise of the aptamer technology as a non-immunogenic alternative to curb the disease progression are
discussed.

ª 2024 The Author. Published by Elsevier B.V. on behalf of Chinese Pharmaceutical Association and
Institute of Materia Medica, Chinese Academy of Medical Sciences. This is an open access article under
the CC BY license (http://creativecommons.org/licenses/by/4.0/).

*Corresponding author.
E-mail address: aabarrera@icesi.edu.co (Alvaro Barrera-Ocampo).
Peer review under the responsibility of Chinese Pharmaceutical Association and Institute of Materia Medica, Chinese Academy of Medical Sciences.

https://doi.org/10.1016/j.apsb.2024.03.034
2211-3835 ª 2024 The Author. Published by Elsevier B.V. on behalf of Chinese Pharmaceutical Association and Institute of Materia Medica, Chinese
Academy of Medical Sciences. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
2796 Alvaro Barrera-Ocampo

1. Introduction that suggests that environmental risk factors, such as exposure to


poor quality air, occupational-related exposures and toxic heavy
The approval of new anti-Ab monoclonal antibodies by the FDA metals, may also contribute to the development of AD14.
(Food and Drug Administration, USA) for the treatment of AD has Increasing amount of evidence has led to the hypothesis that
reignited the interest in immunotherapeutic strategies for this and central nervous system infections caused by viruses, bacteria,
other neurodegenerative diseases caused mainly by protein mis- fungi and parasites may represent an important risk factor because
folding and aggregation. Some years ago, it was reported the these microorganisms may be able to drive the pathogenesis of
failure of many clinical trials involving mAb that showed no AD by inducing neuroinflammation or compromising the integrity
cognitive improvement of AD patients despite the observed of the braineblood barrier15,16. In this regard, recent multi-omic
reduced load of Ab peptides and the excellent preclinical results1. analysis identified 22 key genes regulated by herpes virus in-
The acceptance by the FDA of aducanumab and lecanemab has fections, which were associated with the occurrence and devel-
been highly controversial among the AD field, but it has opened a opment AD17. Additional studies have also related infections
window of opportunity for many other antibodies and immune caused by some bacterial species (e.g., Chlamydia pneumonia,
therapies that were stuck in the pipeline for years2,3. Porphyromonas gingivalis, Borrelia burgdorferi) with the neuro-
pathogenesis of AD18e20. However, despite the correlational data
1.1. Behavioural and psychological symptoms of AD presented by these and other studies, a direct relation between the
neurodegeneration and the microbial infection is hard to establish
Neuroepidemiology studies have established that AD is the most because the mechanism underlying the infection and the changes
prevalent neurodegenerative illness of adult-onset, with extended at the cellular and molecular level that could explain the devel-
prodromal phases characterized by progressive cognitive decline opment of AD are largely unknown.
and memory loss. It is also the most common type of dementia
accounting for 60%e80% of the cases4. It is estimated that the 1.3. Biomarkers and early diagnosis of AD
average time course of the disease is 7e10 years, but changes in
the brain probably start many years before any clinical symptoms The discovery of biomarkers associated with risk factors is an
and signs appear. Most of these changes are caused by the death of essential step in the early diagnosis, monitoring the onset and the
neurons in regions of the brain responsible for memory processing progression of the disease. It is clear that a simple cause of AD is
and other higher cognitive functions. improbable and multiple factors are involved in its progression. In
The entorhinal cortex is one of the first brain regions affected. 2018, the NIA-AAA work group proposed that AD could be part
This structure is connected with the hippocampus and plays a key of a syndrome formed by multiple diseases characterised by signs
role in learning and the formation of long-term memories. The and symptoms. However, this definition only makes sense if the
neuronal death and decrease in size of these brain areas explain person can be accurately diagnosed by its neurocognitive and
the symptoms observed at the early stages of AD, such as neuropathologic changes and the use of biomarkers that can
forgetfulness, changes in attention and ability to solve problems. support the differential diagnoses to rule out non-AD patients. For
The progression of the disease is characterized by memory this, the NIA-AAA work group outlined an unbiased descriptive
decline, language alteration, visuospatial difficulty, loss of classification scheme for biomarkers used in brain aging and AD
awareness and changes in personality, among others. At this stage, intended initially for research (interventional trials and observa-
the clinical diagnosis is usually made, but further structural tional cohort studies)5. They called this classification “AT(N)
damage can be observed in areas of the cerebral cortex responsible biomarker grouping”, where A corresponds to aggregated Ab or
for the control of language, conscious thought, reasoning and associated pathologic state (Cerebrospinal fluid (CSF) Ab42, or
sensory processing. Changes in the neuronal communication in Ab42/Ab40 ratio or amyloid PET); T relates to aggregated tau
the cortex can cause delusions, paranoia, hallucinations, anger (neurofibrillary tangles-NFTs) or associated pathologic state (CSF
outbursts and inability to carry out routine tasks (e.g., eating, phosphorylated tau or tau PET); and N comprehends neuro-
bathing, dressing and others). At the end, extensive neuronal degeneration or neuronal injury (anatomic MRI, fluorodeox-
damage causes serious atrophy of the cerebral cortex and the yglucose PET or CSF total tau)21e23. It is important to clarify that
enlargement of the ventricles. The patient becomes incapable to the biomarkers in the N group are related to neurodegeneration
recognize its relatives, and cannot control the bladder or bowel and brain injury as a result of different causes and are not specific
function, swallow, walk and sleep5. for AD. The AT(N) biomarker scheme can incorporate new bio-
molecules such as TDP43 and a-synuclein, and alterations like
1.2. Risk factors associated with AD hippocampal sclerosis, argyrophilic grains and microinfarcts,
which can occur alone, or more frequently, along with AD path-
A number of risk factors have been related with the onset of AD. ologic changes24,25. Thus, the appearance of new therapeutic al-
The greatest risk factor for AD is the advanced age, since most of ternatives makes early and accurate diagnosis essential to increase
the patients are aged 65 or older6. Other risk factors include family the likelihood of success in delaying the onset or progress of the
history, mild cognitive impairment (MCI), being an apolipoprotein disease, which must be reflected in a stabilization of the cognitive
E-ε4 (APOE-ε4) allele carrier7, which associated with the pres- decline and an improvement in the quality of life of patients and
ence of susceptibility genes, such as ABCA7, TREM2 and SORL18, relatives.
may be useful for predicting dementia linked to AD. Additional There is no cure for AD and the treatments available until 2021
risk factors include potentially modifiable conditions occurring in were only symptomatic. However, the recent approval of a series
midlife, in particular metabolic factors (e.g., type 2 diabetes, high of mAbs capable of reducing Ab load in the brain has put the
blood pressure, high cholesterol, obesity, smoking, etc.), and immune therapy at the centre of the stage not only for the treat-
traumatic brain injury9e13. In fact, there is increasing evidence ment of AD, but for other types of dementias. Therefore, this
Monoclonal antibodies, aptamers and Alzheimer’s disease 2797

review will discuss the relationship between AD, passive and functional activity in specific brain regions could selectively
active immunization with emphasis on the monoclonal antibodies modify synaptic homeostasis, thus offering an explanation to the
currently available in the pharmacotherapy of the disease and convergence of Ab and tau pathology in AD43e45. In this regard, it
some new molecules that are currently under development and has been suggested that the loss of synaptic homeostasis in areas
under clinical evaluation. of high neuronal activity in the DMN could give rise to a
cascading network failure affecting the balance in remote but
connected brain regions that depend on the DMN for proper
2. Protein aggregation and alternative hypotheses about the
functioning46. The posterior cingulate cortex is one of these
pathogenesis of Alzheimer’s disease
regions highly connected to the medial temporal lobe47, therefore,
the synaptic stress caused by Ab accumulation in the posterior
2.1. Neuropathogenesis of Alzheimer’s disease cingulate could explain the propensity of the medial temporal
lobes to accumulate tau when it loses functional support from the
The amyloid cascade hypothesis that embodies the primacy of the DMN48. Thus, during the lifetime of a person prone to developing
biology of amyloid and tau proteins around which much of the AD, synaptic dysfunction that leads to Ab accumulation in the
drug discovery efforts have been focused in the past 20 years, fails DMN could accelerate tauopathy in strongly linked brain regions
to acknowledge many other covert mechanisms that have been and the spreading of tau from the medial temporal lobe to iso-
suggested as relevant to elucidate the causes of AD. Under- cortical regions could account for the transition from no symptoms
standing the cellular events that lead to neuronal and synaptic loss, to dementia in AD. However, despite the advances in under-
which are the likely causes of cognitive impairment in AD, has standing of the interaction between Ab and tau, it is still unknown
been a matter of intense research, but many aspects of it remain how this interplay affects the organization of the connectome
unknown. In this review, the biology of Ab is prominently in AD.
featured as is the base of many mAbs approved or in development
as treatment for AD. Nonetheless, it is important to emphasize that 2.2. Ab peptides and aggregates
there is growing evidence that many other changes occur at the
cellular and biochemical level before the appearance of Ab and 2.2.1. Formation of Ab
tau aggregates26e28, which has been used for years as markers of The most abundant species of Ab are 27e43 amino acids in length
AD. and are derived from the scission of the amyloid precursor protein
From a neuropathological point of view Ab and tau aggregates (APP), a single transmembrane protein that is enriched in neuronal
in the form of senile plaques and NFTs are the main hallmarks of synapses49. APP is produced in neurons and metabolized
AD29. The amyloid cascade hypothesis is based in genetic, path- rapidly50. Following the sorting in the endoplasmic reticulum
ologic, and biochemical evidence that implicate the aggregation of (ER) and Golgi network, APP is translocated to the axon and
Ab as a critical trigger in the series of events related to the synaptic terminals. APP processing is made in the trans-Golgi
abnormal deposition in the brain of the hyperphosphorylated tau network (TGN) and from there; the protein can be transported
protein (also known as tauopathy), neuronal dysfunction, death, to the cell surface or to endosomal compartments through clathrin-
and dementia30. However, the deposition of tau protein correlates associated vesicles. To generate Ab, APP is endocytosed in
with the cognitive decline observed in AD patients31, questioning clathrin-coated pits into endosomal compartments containing
the role of Ab aggregation as the cause for tau pathogenesis. b-secretase enzymes. BACE1 is the b-secretase enzyme that
Analyses of post-mortem human brains revealed a characteristic cleaves the extracellular juxtamembrane region of APP (b-cleav-
progression of Ab deposits and a regular pattern of appearance of age) (Fig. 1). The cleavage of APP by b-secretase releases the
NFTs. The progression of Ab plaques appearance is associated soluble N-terminus of APP (sAPPb) while the C-terminal frag-
anatomically and functionally with affected brain areas32,33. ment (CTF-b or C99) remains bound to the membrane51 (Fig. 1).
Extracellular neuritic plaques containing Ab are found widely This fragment is subsequently cleaved by g-secretase, which is an
distributed throughout the cerebral cortex including the subcortex, aspartyl-type protease membrane protein complex and consists of
allocortex and neocortex while tau-containing NFTs arise first in different several components (Fig. 1). The catalytic elements of
the medial temporal lobe (entorhinal cortex/limbic brain areas and the membrane-embedded tetrameric g-secretase complex are
locus coeruleus), then spread to isocortical regions of the tem- represented by presenilin-1 and presenilin-2, which generate the
poral, parietal, and frontal lobes5,34e36. Ab carboxyl terminus from APP52,53. Nicastrin (NCT), anterior
The occurrence of plaques and tangles correlates positively in pharynx defective 1 (APH-1) and presenilin enhancer 2 (PEN-2)
AD where Ab deposition occurs in a group of areas known as the are additional proteins involved in the g-secretase complex. NCT
default mode network (DMN)37, which is distributed in the and APH-1 seem to stabilize the formation of high-molecular-
frontal, temporal and parietal cortex, and the posterior cingulate mass protein complex needed for the catalytic activity54,55,
gyrus. Brain imaging has evidenced that the activity of these whilst PEN-2 is thought to modulate the endoproteolysis of pre-
regions increases during processes like memory or abstract senilin by forming a stable complex with NCT/APH156. The
thought, but decreases during tasks that require attention. There- g-secretase complex interacts with APP in its transmembrane
fore, the DMN is active when the individual is not focused on the region to create Ab40/Ab42 peptides and the AICD50 fragment57,58
external environment38,39. In contrast, tauopathy seems to affect (Fig. 1). Once Ab peptides are produced, they can be released to
networks that support more specific cognitive domains and are the extracellular space or degraded in lysosomes. This process is
impaired in symptomatic AD, as shown by functional MRI and known as the Amyloidogenic pathway59e61 (Fig. 1).
fluorodeoxyglucose PET40e42. Recent advances in the elucidation
of the brain connectome, which try to determine how billions of 2.2.2. Aggregation of Ab
neurons are interconnected to form neuronal networks that support Ab peptides are found in human brains, both healthy and AD, at
cognition and behaviour43, have allowed to show that the subnanomolar concentrations. In the brain tissue various isoforms
2798 Alvaro Barrera-Ocampo

Figure 1 Processing of APP and production of Ab. APP is initially cleaved by a-secretase (ADAM-10) in the Non-amyloidogenic pathway,
yielding two fragments: sAPPa and C83. The late is cleaved by the g-secretase complex, creating the p3 and AICD peptides. In the Amyloi-
dogenic pathway, b-secretase (BACE1) cleaves APP to produce the sAPPb and C99 fragments, which are then processed by the g-secretase
complex to produce the Ab and AICD peptides.

of Ab can be found. They differ in the number of amino acid receptors, followed by changes in the morphology of dendritic
residues at the C-terminal region of the peptide. The most abun- spines, reduction in spine density, and synaptic deterioration71.
dant Ab species in the brain of AD patients is the isoform Ab40, Moreover, results suggest that soluble Ab oligomeric species can
which has 40 residues62,63. Another Ab species also related to the inhibit electrophysiological activity of hippocampal neurons that
disease is the isoform Ab42, which is less soluble than Ab40 and it may be important for the formation and storage of memory; so, as
aggregates faster64. The structure of Ab peptides have a charac- a consequence, this inhibition seems critical for the development
teristic type of b-sheet arrangement that favours the of AD72. Another interesting finding suggests that Ab oligomers
aggregation, which leads to the formation of oligomeric species also bind to different types of membrane proteins including the
that diffuse through the interstitial fluids. Ab monomers aggregate N-methyl-D-aspartate (NMDA) receptor subunits. The interaction
and polymerize to form high molecular weight species such as of the oligomers with this receptor inhibits synaptic plasticity and
oligomers, protofibrils and fibrils65,66 (Fig. 1). In vitro experiments disturbs calcium homeostasis73,74, causing neuronal death. For this
have shown that the aggregation of Ab starts with a nucleation reason, targeting Ab forms can slow the aggregation process and
step, which leads to the formation of disordered oligomers con- attenuate the cognitive dysfunction that is the main symptom of
verted afterwards into nuclei that elongate into fibrillar assemblies AD.
creating a secondary nucleation process responsible for the pro-
liferation of the aggregates67,68. 2.3. Alternative hypotheses about the neuropathogenesis of AD

2.2.3. Impact of Ab aggregates on the neuronal function For more than two decades, hypotheses regarding the amyloid
It is clear now that not only Ab peptides (Ab40 and Ab42) cause cascade and tau aggregation have dominated the research scene
neuronal dysfunction; especially oligomeric forms of the protein and the development of treatments for AD75. This is probably
seem to be more detrimental to brain functions than the Ab because Ab and tau are the main histopathological markers of the
aggregates such as senile plaques49,69. In this regard, a mixture of disease widely found in the diseased population. However, other
dimers and dodecamers was observed in soluble Ab oligomers points of view have emerged in light of new evidence that
derived from human brains70; whereas the treatment of primary maintains that the origin of AD is multifactorial. Different studies
cultures of hippocampal neurons with Ab oligomers induced a have shown that a large number of changes occur at the molecular,
rapid decrease in membrane expression of memory-related cellular, and biochemical levels before Ab and tau aggregates are
Monoclonal antibodies, aptamers and Alzheimer’s disease 2799

evident. Thus far, more than 10 hypotheses relating to the path- capable of reinducing the reactive state of microglia and
ogenesis of AD have been documented76. Some of the most enhancing the misfolded-protein clearance capacity through
notable are described below. shifting glycolysis to oxidative phosphorylation. This confirms the
importance of microglia within the neurogenerative process in AD
2.3.1. The cholinergic hypothesis and provides cellular targets for the development of future treat-
It was one of the first to try to explain the cause of AD77. This ments97. Another group using in vivo experiments have also shown
postulates that cholinergic system failure is the cause of AD due to that glial activation can be induced by inflammatory substances,
the decrease in the activity of the enzyme acetylcholinesterase in such as Ab, which can result in immunological responses and
regions such as the amygdala, hippocampus, and cortex of AD inflammation. Additional studies have observed increased levels
brains78. Studies based on this hypothesis led to the development of inflammatory cytokines, including, IL-1b, IL-12, IL-18, TGF-b
of the first medications used to treat AD, acetylcholinesterase and TNF-a98. These molecules could be related to cellular death,
enzyme inhibitors (AChEIs)79, which avoid the degradation of and to the development of AD.
acetylcholine and are useful in the palliative treatment of the A recent work evaluated the relationship between the mutation
disease that enhance quality of life but have no discernible impact R136S in the lipid carrier Apolipoprotein E3, denominated
on the development or course of AD80. Christchurch (APOE3ch), and Ab-induced tauopathy. For this, the
authors used a humanized APOE3ch knock-in mouse crossed to
2.3.2. Mitochondrial damage and oxidative stress theories an AD mouse model injected with tau protein from AD brains.
They suggest that the activity of the mitochondria could affect Researchers found that the animals had peripheral dyslipidaemia
APP expression, processing, and accumulation of Ab in AD81. and a significant decrease in plaque-associated tau pathology. In
The concept is composed of three main parts. First, the mito- addition, an increase in microglial response and a decrease in
chondrial function is determined by the genetic background of the amyloid response was observed around Ab plaques. These results
person. Second, both genetic and environmental factors may affect suggest that APOE3ch influences the microglial response to Ab
the age-related mitochondrial changes. Third, the mitochondrial plaques, and it suppresses tau seeding and spreading induced by
activity of an individual varies according to the stage or pro- Ab99. The findings are also in accordance with a renowned case
gression of AD82e84. It has been found in brain tissue from report that identified a person resistant to autosomal dominant AD
deceased AD patients that there is a decreased number of mito- caused by a PSEN1-E280A mutation and a homozygous carrier of
chondria in neurons while oxidative damage is increased. the APOE3ch mutation100. These and other works increasingly
Oxidative stress can be caused by an excess of reactive oxygen emphasize the relationship between lipid metabolism, immune
species or a weak antioxidant defence85. Thus, the imbalance in response, inflammation and the development of AD.
pro-oxidants and antioxidants is associated with the disruption of
redox circuitry and macromolecular damage. In addition, research 3. Pharmacotherapy of AD: The old and the new
has found evidence for a direct relationship between oxidative
stress and neuronal dysfunction in AD. Both in vitro and in vivo Two variants of AD have been recognized. The sporadic AD
evidence points to a direct link between neuronal dysfunction and (SAD) variant can be classified as either early- or late-onset (<60
oxidative stress in AD86,87. Ab-dependent endocytosis is associ- years of age or > 60 years of age) and is characterized by absence
ated with a reduced number of NMDA receptors on the cell sur- of inheritance pattern. In the familial AD (FAD) variant, the dis-
face of neurons. A decreased expression of NMDA receptors can ease tends to develop before 60 years of age (early-onset) and the
be attributed to neuronal death caused by excitotoxicity, which can autosomal dominant heritability accounts for w1% of the AD
be triggered by increased calcium influx, impaired energy meta- cases101,102. Genetic mutations in genes coding for the amyloid
bolism, and mitochondrial damage88. precursor protein (APP), presenilin-1 (PS1) or presenilin-2 (PS2)
are the main responsible of the FAD variant103. The study of FAD
2.3.3. The calcium homeostasis hypothesis cohorts has markedly influenced the understanding of the cellular
It suggests that Ab can increase intracellular calcium levels, mechanisms involved in the pathogenesis of AD. Nevertheless, the
making neurons more susceptible to environmental stimuli89. This cause of SAD is still unknown and the aetiology seems to be
hypothesis has been linked to AD and is closely related to learning heterogeneous. The interaction of multiple factors (e.g., genetic,
and memory. A number of studies have demonstrated that Ab epigenetic and environment) and the lack of clarity on the mo-
upregulates intracellular calcium in neurons, which disrupts lecular and cellular basis of the disease can explain the complexity
neuronal metabolism, induces neuronal apoptosis, and contributes of this variant.
to memory decline90,91. Additional studies found that calcium Regarding the pharmacological treatment of AD, many strate-
overload produce dendrite disintegration, and changes in neuronal gies have been tried so far. These range from traditional palliative
morphology depend on the presence and load of Ab92. approaches to sophisticated disease-modifying strategies such as
gene- and immunotherapy. The standard palliative treatments
2.3.4. The inflammatory hypothesis include inhibitors of the enzyme acetylcholinesterase, that inhibit
There is mounting evidence about the key role of microglia and the breakdown of the neurotransmitter acetylcholine (e.g., riva-
the adaptative immune response in the neuropathogenesis of stigmine, galantamine and donepezil) and are used in mild to
AD93,94. Microglial cells are a type of specialized macrophage moderate AD104,105. Initially, these drugs improve cognition,
present in the brain that have been observed near Ab plaques and behavioural symptoms and routine tasks, but they have shown lack
NFTs in AD brains95,96. Interestingly, a team of researchers of effectiveness and adverse reactions that compromise their
recently used cell cultures and a murine model of AD to establish use106e108. Another drug approved for the palliative treatment of
that the administration of the nanopolyphenol, a-mangostin, was AD is memantine, an antagonist of the NMDA receptor, indicated
2800 Alvaro Barrera-Ocampo

for patients with moderate to severe AD, which presents high drop- central nervous system inflammation or Amyloid-Related Imaging
out rates attributed to the numerous associated adverse Abnormality (ARIA) cases were reported (https://www.
events104,105,109. The sparse effectiveness of these drugs and the lack clinicaltrialsregister.eu; Identifier: 2018-000445-39).
of success of the therapeutic strategies tried so far may be attributed
to several factors: i) the gap in the knowledge about many other 3.1.1.3. CAD106. In 2015 Novartis introduced CAD106
genomic, metabolic and biochemical changes that occur years (https://clinicaltrials.gov; Identifier: NCT02565511), which
before the onset of the first symptoms of AD110e112, ii) the lack of underwent clinical trials until 2020. This contained multiple
biomarkers, accurate and precise tools for the early diagnosis and copies the Ab1e6 peptide coupled with a carrier with 180 copies of
the difficulty to assess the disease stages, and iii) the constrains of the bacteriophage QB coat protein for the induction of the immune
the drug discovery process. For years there has been an urgent need response (Table 1). There were no meningoencephalitis cases
to find disease-modifying agents and this has opened the doors to reported during the phase I trials. However, during phase IIa trials
new approaches from different areas of biomedicine that seek to one patient developed intracerebral haemorrhage and four
generate a quantum leap in the treatment of AD. In this regard, individuals presented imaging alterations related with Ab117,118.
immunotherapeutic strategies emerge with great potential. The study was terminated due to unexpected changes in cognitive
function, brain volume loss, and body weight loss.
3.1. Immunotherapy for AD
3.1.1.4. UB-311. In 2015, United Neuroscience Ltd. started a
3.1.1. Active immunotherapy phase II clinical trial with the vaccine UB-311. The design
Accumulation of Ab is one of the main events related to the neu- concept behind UB-311 consisted in the induction of specific
rodegeneration process in AD. Therefore, immunotherapy has activation of Th-1 cells by introducing the Ab1e14 peptide in
become the epicentre of research to avoid Ab aggregation and combination with UBITh helper T-cell epitope (Table 1). Results
promote its clearance from the brain to delay the onset or progress of of a phase II trial (https://clinicaltrials.gov; Identifier:
the disease. This strategy tries to harness the patient’s immune NCT02551809) indicated that the vaccine had potential to
system to remove Ab peptides from the brain preventing the for- improve the cognitive function in early-to-mild AD patients with
mation of amyloid plaques. This process is called Active Ab-im- 100% responder rate and strong on-target immunogenicity119. The
munotherapy and it is based on stimulating B cells with synthetic clinical trial did not include a placebo group, but compared the
versions of Ab (fragments of full-length) so that the organism increase of AD Assessment Scale-Cognitive Section (ADAS-Cog)
manufactures its own antibodies, which in turn neutralize the Ab scores from baseline in a subgroup of mild AD patients (Mini-
peptides, thus creating a complex that later is cleared out from the Mental State Examination [MMSE] score 20) with a moderate
brain. Relevant information on some of the most notable Ab vac- AD subgroup. Data show a slower rate of increase in ADAS-Cog
cines developed by active immunization is described below. in the subgroup of mild AD patients. In addition, the most com-
mon adverse events observed with UB-311 were injection site
3.1.1.1. AN1792. The first active vaccine developed for the swelling and agitation. The results suggest that UB-311 may have
treatment of AD (https://clinicaltrials.gov; Identifier: NCT00021723) a potential to improve the cognition of patients with early stage of
was developed in 2001 by ELAN and Wyeth using the full-length AD119. In 2022, the FDA granted UB-311 fast-track designation
Ab42 peptide (Table 1). The vaccine achieved some positive results for AD, facilitating expedited development and review.
including reduced cognitive decline. However, the clinical trial was
brought to a halt because w6% of the individuals treated with the
vaccine developed meningoencephalitis113e115. Investigations into 3.1.2. Passive immunotherapy
the cause of this inflammatory process indicated that one of the The passive immunotherapy includes the administration of mAbs
excipients used in the preparation of the vaccine produced the to target a specific antigen. This technology overcomes the
exposition of the Ab C-terminal region, which seems to activate problems of the active immunization taking advantage of three
the response of T-helper 2 cells115. This information was essential for mechanisms that take place once the antibody has crossed the
the development of the new generation of vaccines that did not bloodebrain barrier120,121. The first mechanism depends on the
include this region of the peptide. interaction AbemAb to decrease the formation of toxic aggre-
gates. The second involves the binding between the Fc-g receptors
3.1.1.2. ACI-24. In 2009, AC Immune began a phase I/II trial present on the microglia and the Fc domain of the mAb to induce
of ACI-24 to evaluate safety, immunogenicity, and efficacy. This the phagocytosis of the AbemAb complex. In the third mecha-
vaccine was made using the tetra-palmytoylated Ab1e15 peptide, nism, the formation of the AbemAb complex leads to the acti-
which favours the b sheet folding (Table 1). The design induced vation of the complement-dependent cytotoxicity effect, which
the production of antibodies with specificity for the conformation causes the lysis of the target cell. A fourth additional mechanism
of the peptide and was formulated as liposomes to elicit the im- has been described and is based on the interaction of the mAb with
mune response116. The trial finished in 2018 and ultimately Ab in the peripheral blood to create a concentration gradient that
enrolled only 48 patients of which only 36 produced detectable causes the efflux of Ab from the brain. Next, I present some mAb
anti-Ab42 antibodies (https://www.clinicaltrialsregister.eu; Identi- against Ab already approved by the FDA or currently on track to
fier: 2008-006257-40). Then in 2018, a phase II trial started testing approval, which include aducanumab (Aduhelm ), lecanemab
a new formulation. The results indicate that ACI-24 produced IgM (Leqembi ), gantenerumab and donanemab.
antibody response, but low IgG titers. Levels of Ab40 and Ab42 in
CSF were increased compared to the baseline, suggesting target 3.1.2.1. Aducanumab. It is the first mAb approved by the FDA
engagement, but no change on amyloid-PET was observed. No for the treatment of AD. It was developed by the Swiss
Monoclonal antibodies, aptamers and Alzheimer’s disease 2801

Table 1 Active and passive immunotherapeutic approaches for AD.


Active immunotherapy
Vaccine Company of origin Target Formulation Clinical trial AD patient Result
adjuvant phase status
AN1792 ELAN/Wyeth Ab42 QS-21, polysorbte IIa-finished Mild to No
80 moderate improvement
ACI-24 AC Immune tetra- Liposomes II Mild Decreased Ab
palmytoylated levels
Ab1e15 (b
conformation)
CAD106 Novartis Ab1e6 Bacteriophage Qb III Prodromal NR
protein coat
UB-311 United Neuroscience Ab1e14 CpG/Alum II Mild Decreased Ab
Ltd. levels
Passive immunotherapy
mAb Company of origin Antigen or Binding species Clinical trial AD patient Result
epitope/IgG phase status
Aducamab Biogen NT Ab3-6 (E)/ Oligomers and III Prodromal to Decreased Ab
human IgG1 fibrils mild levels
Lecanemab Biogen/Eisai/ Ab42 AM Protofibrils III Prodromal Decreased Ab
(BAN-2401) BioArctic protofibrils (A)/ levels
hIgG1
Gantenerumab Roche NT Ab1-10 and Monomers, III Prodromal to Decreased Ab
central region oligomers and mild levels
Ab18e27 (E)/ fibrils
human IgG1
Donanemab Eli Lylli pGlu3-Ab/human Core plaques III Prodromal Decreased Ab
IgG1 levels
A: antigen; E: epitope; hIgG: humanized IgG; NT: N-terminal region; CT: C-terminal region; AM: arctic mutation; NR: not reported.
Source: http://www.clinicaltrials.gov.

biotechnology company, Neurimmune, which in 2007 licensed the antibody with placebo. These trials included volunteers (50e85
development and commercialization to Biogen122,123. This human years of age) with MCI or mild dementia and PET positive evi-
IgG1 mAb was developed from a library of B cells created from dence of Ab pathology in the brain (https://clinicaltrials.gov;
healthy aged individuals122. Aducanumab recognizes the Ab Identifier: NCT02477800 and NCT02484547)127. Biogen amen-
N-terminal region binding to oligomers and fibrils of subjects ded the phase III trial protocol based on results of the phase Ib
with prodromal to mild AD (Table 1)122,124. A linear epitope study. This time the dose of aducanumab was increased and the
formed by the amino acids 2e7 of Ab increases aducanumab’s management of the participants who presented mild-to-moderate
affinity towards aggregates of fibrils, as compared to monomers ARIA was changed by resuming the treatment at the same
(Fig. 2)125. The complex between aducanumab and Ab is stabi- dose128. In 2019, the phase III clinical trials were completed, and
lized by the interaction of an arginine on the antibody and a the analysis of the results showed that the studies did not have
phenylalanine on the peptide, which explains the high affinity statistically or clinically significant effect. However, the company
binding (Fig. 2)125. A preclinical animal model of AD showed that included additional data and further analyses were made129. Then,
aducanumab reduces brain pathology by stimulating microglia and the results of the two trials were published. The EMERGE trial
removing parenchymal, rather than vascular Ab122. In addition, a showed statistically significant effect but clinically doubtful
proteome analysis of the plaque environment found an elevation in benefit after 78 weeks of treatment according to the Clinical
proteins involved in metabolism, phagocytosis, regeneration of Dementia Rating (CDR) Sum of Boxes score in the subgroup
axons and neurons, as well as reduction in proteins related with receiving the higher-dose treatment. In contrast, the ENGAGE
Ab toxicity in a transgenic mouse model of AD treated with trial did not show such benefit. Traditionally drug approval
aducanumab126. In 2012, Biogen started a phase Ib clinical trial depended on 2 rigorous trials showing positive results; however,
(PRIME) (https://clinicaltrials.gov; Identifier: NCT01677572). on June 2021, the FDA gave accelerated approval to aducanumab
The randomized, bouble-blind, placebo-controlled study focused for MCI and mild AD dementia based on the drug’s ability to
on the safety and tolerability of aducanumab and the capability to remove Ab plaques in the brain130. This decision was highly
reduce Ab load. Results revealed an improvement of cognitive controversial because it was made against the advice of its own
decline in AD patients, but caused ARIA in 41% of the volunteers advisory committee131. Thus far, the relationship between Ab
with high-dose treatment (10 mg/kg). In 2015, before completing removal and improvement in clinical outcomes for those with AD
the phase Ib study, the company began two phase III placebo- is unclear. The accelerated approval requires conducting post-
controlled randomized trials (EMERGE and ENGAGE) aiming marketing studies to confirm the benefits and in this case, Biogen
to compare the clinical efficacy of low or high doses of the has 9 years to complete the confirmatory trial, but reliance on
2802 Alvaro Barrera-Ocampo

Figure 2 Region of interaction between aducanumab and Ab. The coecrystal structure reveals the presence of a linear epitope between amino
acids 3 and 7 of Ab. The most essential residues in Ab to form the complex with the antibody are phenylalanine (F4) and histidine (H6), which are
buried inside a hydrophobic pocket formed by the residues tryptophan (W52), tyrosine (Y59), isoleucine (I102), glycine (G103), arginine (R105)
and proline (P108) of the heavy chain, and tyrosine (Y32), tyrosine (Y92) and threonine (T94) of the light chain of aducanumab. Thus, explaining
the high affinity binding (PDB 6CO3, structured epitope amino acids 3e7)125,135.

future confirmatory evidence is problematic132. There are serious NCT01230853)141. In 2012, an 18-month phase II proof-of-
concerns about aducanumab’s efficacy and adverse effects, which concept, double-blind study evaluated safety, tolerability, and effi-
include ARIA and the related symptoms (headaches, confusion, cacy of lecanemab in individuals with early AD. This clinical trial
dizziness, nausea, etc.)133. Although these effects are worrisome, assessed three doses across two regimens of lecanemab versus
death is the greatest risk as few fatalities potentially related to placebo, and it showed a 64% probability to be better than placebo. It
aducanumab have been reported134. also determined that the antibody was well tolerated with 9.9%
incidence of ARIA-E at 10 mg/kg biweekly. Even though, the study
3.1.2.2. Lecanemab (BAN2401). It is the second-ever mAb did not meet the 12-month primary endpoint, results from pre-
approved by the FDA for the treatment of AD. It was developed by specified 18-month frequentist analyses showed that lecanemab
BioArtic and then licensed to Eisai in collaboration with Biogen. treatment reduced Ab load and clinical decline by 47% as per
This is the humanized version of the murine antibody mAb158, ADAS-Cog in a dose-dependent fashion in volunteers with early
which was raised against APP bearing the Arctic mutation (mutation AD142. In addition, the trial established that the optimal dosage for
E22G mutation in Ab)136,137. The antibody recognizes Ab proto- Ab clearance was 10 mg/kg administered intravenously biweekly,
fibrils with much higher affinity than monomers and reduces this without titration (https://clinicaltrials.gov; Identifier:
specific conformation of the peptide in the brain and CSF of trans- NCT01767311)142. In 2019, it started a phase III study (Clarity AD)
genic mice expressing both the Arctic mutation and the “Swedish” to evaluate the efficacy of lecanemab in participants with early AD.
double mutation in APP (K670N/M671L; tgArc-Swe mice) The aim was to determine the superiority of lecanemab compared
(Table 1)138. A series of experiments using co-cultures of astrocytes, with placebo and to evaluate the long-term safety and tolerability of
neurons, and oligodendrocytes from mouse embryos revealed that this in participants with early AD143. The clinical trial confirmed the
the treatment with mAb158 can protect neurons from Ab42 toxic results of the phase II study and met its pre-specified endpoints.
concentrations by preventing the accumulation of Ab through After 18 months, the trial showed that lecanemab reduced the
astrocyte-uptake139. In addition, recent preclinical studies have burden of Ab in the brain versus placebo and slowed the loss of
shown that the mAb rescues neurons from Ab-induced cell death, cognition by 26% according to the ADAS-Cog score. Lecanemab
which is associated with improvements in brain perfusion and was generally well-tolerated, with a low incidence of ARIA-E
neuronal viability139,140. In 2010, a phase I clinical trial investigated (12.6%) and demonstrated a significant slowing of decline in clin-
the safety and tolerability of the antibody. The study was carried out ical outcomes in early AD (https://clinicaltrials.gov; Identifier:
with staggered parallel single and multiple ascending doses, from NCT03887455)143.
0.1 mg/kg as a single dose to 10 mg/kg biweekly for four months.
The results proved that the incidence of ARIA-E/H on MRI was 3.1.2.3. Gantenerumab. It was the first fully human mAb
comparable to that of placebo and that the antibody was well- designed to bind to a conformational epitope on Ab fibrils with
tolerated across all doses (https://clinicaltrials.gov; Identifier: subnanomolar affinity. The antibody was selected from synthetic
Monoclonal antibodies, aptamers and Alzheimer’s disease 2803

human combinatorial antibody libraries created by phage display, Identifier: NCT01224106, NCT01636531, NCT02133937,
followed by in vitro affinity maturation using cassette exchanges NCT02882009). One phase I trial evaluated the effect of the
of complementarity determining regions (CDR)144,145. Experi- antibody on cognition and functioning and the safety and phar-
ments of epitope mapping demonstrated that gantenerumab rec- macokinetics in volunteers with prodromal AD (https://
ognizes two discontinuous regions of Ab (N-terminal and central clinicaltrials.gov; Identifier: NCT01224106). The volunteers
region), showing the highest affinity at residues 2e11 and received subcutaneous injections of either gantenerumab or pla-
18e27146. The complex between gantenerumab and Ab is char- cebo and a subgroup of 16 participants underwent PET scanning
acterized by an extended conformation of the peptide in the to assess brain amyloid. In the group who received a 60 mg dose,
groove. The first four residues are bound to the heavy chain of the there was a mean change of 15.6% from the baseline relative to
antibody, whereas residues 5 to 11 interact with both heavy and placebo in the levels of Ab cortical, whereas in the group who
light chains. Two additional residues interact through hydrogen received a 200 mg/kg dose it was 35.7%. Two patients in the last
bonds with atoms of the main chain146 (Fig. 3). The separate group showed transient and focal areas of inflammation or vaso-
epitopes provide the antibody with the flexibility to bind several genic edema on MRI scans at sites with the highest level of am-
sequences and facilitate avidity-enhanced binding on the fibril yloid reduction147. Through this study it was established that there
surface. This flexibility raises the selectivity of the antibody for was a dose-dependent relationship in the reduction of Ab levels
various Ab species, and increases the affinity for monomeric, and it laid the foundation for subsequent efficacy studies, where
oligomeric, and fibril forms as evidenced by the dissociation 105 mg/kg to 225 mg/kg doses were selected if ARIA did not
constants (monomers: 17 nmol/L, oligomers: 1.2 nmol/L, fibrils: appear147. The development of a formulation for subcutaneous
0.6 nmol/L)146. In order to clarify the mechanism throughout administration of gantenerumab was one of the most innovative
gantenerumab elicits the clearance of Ab from the brain, a aspects achieved by the creators of the antibody, since the drugs
phagocytosis assay was performed using brain slices from approved for the treatment of AD are administered orally and the
deceased patients with AD. In this experiment, the slices were vast majority of mAbs are administered intravenously requiring
treated with the antibody and afterwards they were incubated with specialized personnel in a hospital environment. This imposes an
primary human macrophages or primary human microglia. additional strain on the patient and increases costs to the health-
Immunohistochemical analysis showed a concentration-dependent care system.
decrease of Ab load mediated by phagocytic activity and further In 2010, Hoffmann-La Roche started a multicentre, randomized,
lysosomal degradation146. From 2010 to 2016 four phase I clinical double-blind, placebo-controlled phase II study to determine the
trials were conducted to test the safety, tolerability, pharmacoki- efficacy and safety of 105 and 225 mg/kg doses of subcutaneous
netics, and pharmacodynamics of gantenerumab in healthy gantenerumab every 4 weeks in participants with prodromal AD
individuals and patients with AD (https://clinicaltrials.gov; over a 2-year period. This trial included patients with gradual

Figure 3 Region of interaction between gantenerumab and Ab. The co-crystal structure of the antibody and Ab (PDB 5CSZ) shows a linearized
conformation formed by amino acids 1e10 of Ab. Gantenerumab exhibits nanomolar binding affinity to Ab40 as revealed by the dissociation
constants for Ab40 fibrils, oligomers, and monomers: 0.6, 1.2, and 17 nmol/L, respectively146,148. X-ray crystallography of gantenerumab Fab with
Ab1-10 monomer reveals that the peptide contacts extensively with histidine (H1), histidine (H2), histidine (H3), and leucine (L1) in the CDR.
However, the complex formed with neutral histidine is energetically unstable and the protonation of histidine (H6) seems to control the interaction
between the antibody and Ab148.
2804 Alvaro Barrera-Ocampo

decline in memory function, impaired episodic memory on testing, a Group since 2009) announced that gantenerumab failed to
CDR scale global score of 0.5, a memory score of 0.5 or 1 in the same slow cognitive decline on the CDR Sum of Boxes in the
rating test, and biomarker evidence of AD pathology. Then, in 2012 GRADUATE trials and informed that it had stopped all gante-
the study was expanded to a phase II/III trial called SCarlet RoAD, nerumab studies including recently started phase III SKYLINE
which was looking to establish the effect on cognition and function trial (https://clinicaltrials.gov; Identifier: NCT05256134). The
of patients with prodromal AD under treatment for two years with latter aimed to evaluate gantenerumab in cognitively unimpaired
the option of a two-year extension (https://clinicaltrials.gov; Iden- people with CSF or PET evidence of brain amyloid154. In spite of
tifier: NCT01224106). The primary endpoint was the change from that, Roche has already developed a new formulation of gante-
baseline to week 104 in CDR Sum of Boxes scores and the change in nerumab based on the “brain shuttle” technology to increase the
brain amyloid levels as measured by PET. However, the study was antibody’s ability to enter the brain155. This time under the name
halted early based on an interim futility analysis; dosing was dis- of Trontinemab (RO7126209), the brain shuttle gantenerumab
continued; and the study was unblinded. No differences were (RG6102)156 is being tested in a phase Ib/IIa trial. This random-
observed between groups in the CDR Sum of Boxes from baseline, ized, double blind, placebo-controlled, parallel-group study is
and for placebo and gantenerumab (105 and 225 mg/kg doses). The aiming to evaluate the safety, tolerability, immunogenicity, phar-
incidence of asymptomatic ARIA increased in a dose- and APOEε4 macokinetics, and pharmacodynamics of multiple-ascending
genotype-dependent manner149. Despite stopping the study, it was intravenous doses of the new antibody in volunteers with pro-
possible to establish dose-dependent effects based on clinical and dromal or mild to moderate AD with confirmed Ab plagued based
biomarker endpoints, thus suggesting that higher dosing with the on PET scan (https://clinicaltrials.gov; Identifier: NCT04639050).
antibody was necessary to achieve clinical efficacy. Given the out-
comes of the phase I gantenerumab PET substudy showing the safe 3.1.2.4. Donanemab. It is a humanized IgG1 mAb directed
Ab removal from the brain, a second phase III study in mild AD against the N-truncated pyroglutamate Ab peptide at position 3
dementia was initiated. The Marguerite RoAD was a multicenter, (pGlu3-Ab, AbpE3). This antibody reduces pGlu3-Ab by inhib-
randomized, double-blind, placebo-controlled, parallel-group trial iting the enzyme glutamyl cyclase (QC), thus averting pGlu3-Ab
evaluating the efficacy and safety of subcutaneous gantenerumab formation and aggregation in plaques157e160. Pyroglutamate is a
(105 or 225 mg/kg every 4 weeks) in volunteers with mild AD cyclic amino acid found at the N-terminal region of some proteins
dementia for 2-years (https://clinicaltrials.gov; Identifier: and peptides. pGlu3-Ab is formed by the cyclisation of either
NCT02051608). However, the interruption of the SCarlet RoAD glutamine or glutamate by the enzyme GC at amino acid positions
study because the results of the futility analysis, led to a halt in the 3 or 11 of Ab, following truncation by N-terminal proteases161.
recruitment of volunteers for the Marguerite RoAD trial, which The N-terminal pyroglutamate structure is resistant to degradation
together with the SCarlet RoAD study were switched to open-label by peptidases, thus increasing peptide stability. In addition,
extension studies, with participants titrated up to 1200 mg/kg gan- pGlu3-Ab has been found in the hippocampi and cortices of
tenerumab. These extension studies lowered brain amyloid by an patients with AD in greater concentrations than full-length Ab,
average of 59 centiloid on florbetapir PET, with half of the 28 par- suggesting that it is involved in the early neurodegeneration pro-
ticipants who reached this timepoint falling below the threshold for cess162. Preclinical data has shown that donanemab binds against
Ab positivity, and the rest on trajectory to do so. About one-third of either soluble or aggregated conformations of pGlu3-Ab and it has
participants in the extension studies developed ARIA-E and 65% of strong reaction with amyloid plaques, specifically with cored
these cases were asymptomatic150,151. plaques without causing microhemorrhages in mice160. Histolog-
In 2012, gantenerumab was evaluated in parallel with sol- ical analysis using postmortem brain tissue from Down’s syn-
anezumab in a phase II/III trial called Dominantly Inherited drome or AD patients demonstrated that this antibody is able to
Alzheimer Network Trials Unit (DIAN-TU). This aimed at pre- recognize a subset of about one-third of Ab plaques, and strongly
venting dementia in people with an inherited autosomal-dominant reacts with Ab plaque core. It also binds to vascular Ab and is able
mutation in APP, PS1, or PS2 (https://clinicaltrials.gov; Identifier: to detect intraneuronal Ab in a mouse model of AD163.
NCT01760005). Unfortunately, the DIAN-TU study did not meet In 2013, Eli Lilly started a phase I study including 100 people
its primary endpoint because none of the antibodies demonstrated Ab positive (PET scan) with mild cognitive impairment due to
a positive effect on cognition when compared to placebo, and the AD, or mild AD. The aim was to establish the safety, pharma-
cognitive change in the clinically normal group was negligible. cokinetics, and pharmacodynamics of five intravenous doses from
However, a significant reduction on Ab plaques was observed 0.1 to 10 mg/kg, infused monthly up to four times, and a single
using the Pittsburgh Compound B PET compared with placebo at subcutaneous injection against placebo (https://clinicaltrials.gov;
2 and 4 years. Furthermore, the antibody seemed to normalize AD Identifier: NCT01837641). Only the six participants who received
biomarkers152. the highest dose showed an Ab plaque load reduction in the brain
Later in 2018, the phase III GRADUATE 1 and 2 trials began of 40%; in this group, no ARIA-E was found, but two asymp-
(https://clinicaltrials.gov; Identifier: NCT03443973). During these tomatic cases of ARIA-H were identified. Worryingly, the anti-
studies, participants with prodromal or mild AD received up to body turned out to be strongly immunogenic causing infusion
1020 mg subcutaneous gantenerumab, given as 510 mg/kg every reaction with flushing, rash, chills, dizziness, and fever, and anti-
two weeks for two years. The GRADUATE trials take into drug antibodies were found in plasma164. Then, in 2015, the
consideration Ab positivity confirmed by CSF or PET; a gradual company began a second phase 1 study in people with prodromal
and universal dose-titration regimen regardless of APOEε4 status to moderate AD (https://clinicaltrials.gov; Identifier: NCT02
aiming to reduce Ab plaque levels while minimizing ARIA-E 624778). The main outcome was to measure the effect of dona-
events153. Then, in 2021 the study was expanded expecting nemab on Ab load by using florbetapir PET. In addition, the study
to reclute 2032 participants until 2024. The volunteers would was set to determine blood pharmacokinetics of donanemab, and
receive 510 mg/kg of gantenerumab every two weeks. However, auto-antibodies raised against the molecule. For this, 61 partici-
on November 2022, Roche (a member of the Genentech pants were randomized 3:1 to drug or placebo and three dosing
Monoclonal antibodies, aptamers and Alzheimer’s disease 2805

regimens were tested, the first consisting of a single dose of 10, aims to establish the steady-state concentration in plasma of the
20, or 40 mg/kg, the second of 10 mg/kg every other week for 24 antibody, the incidence of anti-donanemab antibodies, and a
weeks, and the third of 10 or 20 mg/kg every month for 16 number of cognitive tests. It is worth mentioning that the assess-
months. Results indicate that the antibody reduced Ab load by an ments and monitoring of the participants are done remotely using
average of 90e100 centiloids after monthly doses of 10 or phone or video calls. Drug administration, blood draws
20 mg/kg for 16 months. However, about 25% of the participants and complementary tests will be done in specialized centres
developed ARIA-E, of which only two cases presented symptoms (https://clinicaltrials.gov; Identifier: NCT05026866). At the end of
that resolved when dosing was discontinued165. 2021, Eli Lilly began TRAILBLAZER-ALZ 4, a phase III study
Based on the encouraging results from previous studies, Elli looking to compare donanemab to aducanumab on Ab plaque
Lilly started in 2017 a series of phase II and III trials called clearance in participants with early symptomatic AD. This is an
TRAILBLAZER-ALZ. The first of them was a phase II study aimed open-label, parallel-group, 2-arm trial aimed to determine the
to evaluate safety, tolerability, and efficacy of an 18-month course of number of participants who reach complete plaque clearance after
donanemab alone and in combination with the BACE inhibitor treatment during every four weeks for 18 months according to
LY3202626 produced by the same company (https://clinicaltrials. florbetapir PET. Preliminary results indicate that in the first six
gov; Identifier: NCT03367403). This enrolled participants who months of treatment donanemab eliminated four times more Ab
had memory deficits for at least six months and had positive flor- plaques than aducanumab, whilst adverse events such as ARIA-E
taucipir PET scans. In this case, donanemab was dosed at 700 mg/kg were similar in both groups (https://clinicaltrials.gov; Identifier:
monthly for the first three months, then 1400 mg/kg for up to 18 NCT05108922). Another phase III study called TRAILBLAZER-
months. The main result was to look for changes in the cognitive ALZ 5, started at the end of 2022. The volunteers will receive
performance of the participants according to different rating scales monthly infusions of donanemab or placebo, and the change on
(e.g., Integrated AD Rating Scale - iADRS, ADAS-Cog13, CDR the iADRS at 18 months will be the primary outcome expected to
Sum of Boxes, MMSE, ADCS-iADL), as well as Ab and tau PET be reached before 2027 (https://clinicaltrials.gov; Identifier:
and volumetric MRI. In 2018, the administration of the BACE NCT05508789). Recently, Eli Lilly started the TRAILBLAZER-
inhibitor was stopped and early in 2021, the company announced ALZ 6 trial, which will investigate different donanemab dosing
that donanemab was able to slow the cognitive decline on the iADRS regimens and their effect on the frequency and severity of ARIA-E
by 32% compared to placebo at 18 months. The treatment with the in adults with early symptomatic AD and explore participant
antibody produced an average reduction in Ab plaque by 84 centi- characteristics that might predict risk of ARIA. The study is
loids, from 108 at baseline and 66% of the participants who received focused on volunteers aged 60 to 85 with gradual and progressive
the antibody were Ab negative by the end of the trial. Additional change in memory function for six months with a MMSE score of
results showed that the treatment decreased the aggregation rate of 20e28 and Ab PET scan results consistent with the presence of
NFT in the frontal cortex and other brain areas166. Regarding the amyloid pathology (https://clinicaltrials.gov; Identifier:
adverse events, at the end from the 272 participants enrolled in the NCT05738486). Based on the results and the evidence collected in
study, 27% developed ARIA-E, with 6% becoming symptomatic. previous studies, the company is planning to apply for FDA
Treated participants also had more ARIA-H, small brain bleeds, and approval in the next months, this after the application for dona-
nausea. The results also indicate that 90% of the patients developed nemab’s accelerated approval was rejected at the beginning of
anti-drug antibodies and loss of brain volume measured by MRI 2023 citing insufficient safety data at the moment of the sub-
probably because of inflammation166. By the end of 2020, Eli Lilly mission in 2021. Eli Lilly’s antibody slows AD and data suggests
began recruiting for TRAILBLAZER-ALZ 2, a phase II study that donanemab may work better than similar drugs already in the
focused on volunteers who had shown progressive and gradual market. However, there is serious concern about the safety of the
memory decline for at least six months (MMSE with scores from 20 patients since the company acknowledges deaths and serious brain
to 28) with Ab and tau PET scans (https://clinicaltrials.gov; Iden- side effects.
tifier: NCT04437511). The main objective of the trial was to The TRAILBLAZER-ALZ clinical trials represent a magnifi-
determine the change in CDR Sum of Boxes after 18 months, whilst cent opportunity to advance knowledge about AD, even if the
the secondary outcomes included cognitive deficit scores (e.g., results are not positive in the end. Donanemab is presented as a
MMSE, ADAS-Cog13, iADRS, and ADCS-iADL), disease bio- therapeutic alternative with high potential to modify the progres-
markers (Ab and tau by PET), volumetric MRI, as well as phar- sion of AD and, in an ideal scenario, offers patients and their
macokinetics and anti-donanemab antibodies evaluation. Initially, families the possibility of improving the quality of life by pre-
the study was set to be developed during early 2024, but the com- serving cognitive function and reducing the burden of symptoms
pany decided to extend the study to a phase III trial with 1800 associated with the disease, which would have a positive impact
participants. In this case, the main outcome will be to establish on the autonomy and well-being of patients. However, the adverse
changes in the iADRS based on a disease-progression model. effects reported by the participants evidence a significant risk that
In August 2021, the phase III TRAILBLAZER-ALZ 3 study must be considered, taking into account fundamental ethical
started enrolling cognitively normal volunteers aged 50 to 55 with principles such as respect for autonomy and equity in the distri-
increased levels of phosphorylated tau (ptau217). The main goal bution of risks and benefits. The presence of ARIA-H, small brain
of this study is to evaluate the safety and efficacy of donanemab in bleeds, and decreased brain volume can have disastrous conse-
participants with preclinical AD. Nine monthly infusions of the quences for the health of the patients, potentially exacerbating the
antibody or placebo will be administered, and the individuals will symptoms of the disease or favoring the appearance of new
be monitored every six months. The main goal is to determine the complications. Likewise, the formation of anti-donanemab anti-
clinical progression based on a score above zero on the CDR for bodies could affect the efficacy of the treatment and trigger serious
two consecutive evaluations. The trial, set to run until 2027, also immunological reactions for the individual. Even mild adverse
2806 Alvaro Barrera-Ocampo

effects such as nausea should be weighed, as they can affect the neuropathologically confirmed AD brain tissue (Fig. 4a). Then, in
treatment adherence and quality of life of the patient. 2020, Zheng et al.176 generated the Ab7-92-1H1 aptamer aimed to
inhibit the aggregation of both Ab42 monomers and oligomers as
3.2. DNA aptamers: An alternative to the immunotherapy for demonstrated by atomic force microscopy and surface plasmon
AD resonance analysis. This 44-nucleotide aptamer with a Kd of
63.4 nmol/L, effectively avoided the formation of amyloid
Nucleic acids can assume complex structures to act as scaffolds of aggregates (Fig. 4b). Altogether, these results show that aptamers
molecular interaction and create complexes with a great variety of have the potential to modify the course of AD by binding with
molecules. This principle was the fundamental basis for the high affinity and selectivity to Ab species in order to inhibit its
development of aptamers more than 20 years ago167,168. Aptamers aggregation and thus alter/delay the neurodegenerative process of
are single-stranded oligonucleotides (DNA or RNA), with a length this disease. In addition, these proof-of-concept studies in aptamer
less than 100 base pairs, which have the ability to bind to other technology continue to reveal their promising functionality and
molecules with high affinity and specificity. Currently, a large immense therapeutic potential. This unique class of biomolecules
number of aptamers can bind several targets, ranging from inor- not only possesses the flexibility of small molecules, but also has
ganic molecules to large protein complexes, and whole cells. the high specificity of antibodies, allowing targeted disease ther-
Aptamers can be considered nucleotide analogues of antibodies, apy that cannot be achieved with small drug molecules. The
but with very low immunogenicity and toxicity. In addition, its particular advantages of aptamers, specially the next-generation
generation is significantly easier and cheaper than the production aptamer-based therapeutics with superior biological functions
of antibodies169. and pharmacokinetic profiles are highly anticipated and could fill
The discovery of the aptamers is carried out through an iter- an important niche market. Furthermore, the technological
ative selection process called SELEX (Systematic Evolution of advancements in synthesis and formulation, and the inclusion of
Ligands by EXponential enrichment), in which libraries contain- artificial intelligence (AI) and machine learning (ML) in the
ing about 1  1015 oligonucleotides of random sequence are SELEX process, provide a strong impetus for the development of
incubated with the target of interest. The molecules that bind to this promising class of therapeutics.
the target are separated from those that do not bind. Subsequently,
those oligonucleotides that recognize the target are amplified to 3.2.1. DNA aptamers: Clinical implications, ethical
increase the population of interacting molecules. This process is considerations, and comparison with traditional immunotherapy
repeated several times until a group of sequences with high DNA aptamers show significant promise in the treatment of
affinity for the target of interest is obtained170. neurodegenerative diseases such as AD, but the clinical implica-
These oligonucleotides are a very powerful tool that has tions, ethical considerations, and comparative advantages with
multiple advantages because they can be produced in greater traditional immunotherapy need to be considered. As this tech-
quantity than the antibodies while preserving the sequence that nology evolves, it is essential to ethically and equitably address
encodes them; this translates into a high level of reproducibility at the challenges and opportunities it presents to ensure its respon-
the time of manufacturing them. Because the generation process is sible and beneficial use in the clinical setting.
chemical and not biological, the risk of contamination with bac- When analysing the clinical implications of aptamers, it is
teria and viruses that can occur in the production of antibodies important to take into account aspects such as specificity and
disappears, reducing the downstream processing costs171. Its small selectivity, versatility in design and accelerated development, and
molecular size (<30 kDa) facilitates access to regions that cannot lower immunogenic capacity. DNA aptamers can be designed to be
be reached by antibodies172. In addition, aptamers can be func- highly specific and selective toward their therapeutic targets. This
tionalized and integrated with other technologies to increase their could lead to more precise treatments by avoiding unwanted side
plasma half-life, promote passage through biological barriers or effects and minimizing interference with other cellular functions.
interact with a specific cell type169. Advances in aptamer engi- Likewise, the ability to design specific aptamers for a wide range of
neering have made it possible that many of the limitations pre- targets makes them versatile in the treatment of various neurode-
sented by these molecules have been overcome. Some of the generative diseases, including AD. This could allow the develop-
improvement strategies include modification and optimization to ment of personalized therapies adapted to the individual needs of
improve the pharmacokinetic properties and make them resistant patients. Aptamer technology enables rapid design and efficient
to degradation by nucleases, among others173. production of therapeutic agents, which could accelerate the
The therapeutic potential of aptamers to treat neurodegenera- development of new treatments and reduce the time to market.
tive diseases such as AD has begun to be explored. Currently, Additionally, compared to some traditional treatments, DNA
multiple aptamers have been generated against molecular targets aptamers may have fewer adverse immunological reactions, which
of this disease. In the case of AD, there are aptamers with high could improve the tolerability and safety of the treatment. However,
affinity for the b-secretase enzyme, BACE1; which is involved in it is essential to carry out exhaustive preclinical studies in order to
the initial step of Ab production. In this regard, Liang et al.174 understand in depth the behaviour and effect of aptamers on the cells
discovered the A1 aptamer, which inhibits the activity of and tissues to which they are directed. This is in order to guarantee
BACE1 with high specificity and reduces the production of Ab. their safety once they are used on human beings.
Other approaches to this disease are focused on inhibiting the Regarding the ethical considerations of using DNA aptamers
aggregation of Ab and the high toxicity shown by its oligomers. In for the treatment of AD, it is crucial to ensure that patients are
2018, Chakravarthy et al.175 by using SELEX developed a number fully informed about the nature of aptamers, their potential ben-
of DNA aptamers with affinity against Ab40. The authors used the efits, and their risks before participating in clinical trials. Trans-
ELONA-binding assay and Western blot to establish that the parency in communication and informed consent are fundamental
aptamer RNV95 conformed by 39 nucleotides had the capability ethical principles. Since aptamers are an emerging technology,
to bind to tetrameric and/or pentameric Ab peptide aggregates in patient safety must be prioritized. Continuous monitoring during
Monoclonal antibodies, aptamers and Alzheimer’s disease 2807

Figure 4 Interaction of the aptamers RNV95 and Ab7-92-1H1 with Ab. a) Molecular docking analysis showing the interaction between the
Ab40 peptide (light blue) and the RNV95 aptamer (ocher and orange) published by Chakravarthy et al.175. In the analysis, it is observed that the
most notable interactions between both molecules occur due to the formation of hydrophobic interactions (black dotted lines), salt bridges (yellow
dotted lines) and hydrogen bonds (blue lines). b) Molecular docking analysis showing the interaction between the Ab42 peptide (light blue) and the
Ab7-92-1H1 aptamer (ocher and orange) published by Zheng et al.176. The analysis reveals that bindings that contribute the most to the interaction
between both biomolecules include pi-stacking interactions (green lines), salt bridges (yellow dotted lines) and hydrogen bonds (blue lines).
Molecular docking analyses were made using the following software and web platforms: Mfold, RNAfold, RNAComposer, VMD, Chimera X,
Yasara, HADDOCK, PLIP, and PDBePISA177e185.

clinical trials and long-term data collection are essential to eval- facilitate administration compared to some antibodies that are
uate and mitigate any unexpected adverse effects. The issue of often administered intravenously. Furthermore, while some anti-
equity in access to aptamer-based treatments also needs to be bodies can induce immune responses, aptamers tend to be less
addressed, especially given that scientific advances often face immunogenic. This could reduce the risk of adverse reactions
challenges in global distribution and accessibility for different from the immune system, thus being safer for patients.
communities.
When comparing traditional immune therapy and aptamers, it 3.2.2. The impact of AI and ML on the development DNA
is necessary to analyse in detail critical aspects of each technol- aptamers
ogy, such as specificity and selectivity, structural complexity and The combination of AI and machine learning ML has the potential
development, production and costs, pharmaceutical forms and to transform the development of DNA aptamers for the treatment
routes of administration, and immunogenicity (Fig. 5). Regarding of neurodegenerative diseases such as AD. These technologies can
specificity and selectivity, both approaches, aptamers and anti- accelerate the process of aptamer design, optimization, formula-
bodies, can be designed to be highly specific. However, the tion, delivery, and customization, leading to more effective and
versatility of aptamers in terms of structural design may allow for precise therapeutic approaches to address the complexity of these
greater selectivity for specific targets. On the other hand, the diseases. In recent years there has been a resurgence in the number
structural complexity of antibodies can be an advantage or of publications related to the application of AI and ML to the
disadvantage, depending on the context. While the fixed structure discovery of aptamers for various applications, thus demonstrating
of antibodies can confer stability, the structural flexibility of the enormous potential that exists when combining these
aptamers allows for more specific and rapid design. technologies.
Aptamer production can be more cost-effective and faster In 2021, a methodology using ML-guided Particle Display was
compared to antibody production, which often involves the use of published. This was used to develop, validate and improve exist-
live cells in culture. This could influence the accessibility and cost ing experimental candidates, discover new aptamers, and improve
of treatments. Likewise, aptamers can be designed to be admin- therapeutic characteristics. The authors were able to evaluate more
istered by various routes, including oral and topical, which could than 187.000 aptamers and automatically identify candidates with
2808 Alvaro Barrera-Ocampo

Figure 5 Advantages, disadvantages and similarities between Aptamers and mAbs technology. Each type of technology has advantages, and
many of these are similar between the two. However, it is important to highlight that there are also fundamental differences between aptamers and
mAbs in terms of structure, production method, and some characteristic properties that may represent a disadvantage when selecting between
these types of biomolecules.

minimal length and high affinity for the target186. More recently, design of pharmaceutical forms of administration. In this case,
Perez et al.187 published a ML algorithm capable of predicting the algorithms will analyse, for example, the compatibility and
aptamers from conserved primary and secondary structures, taking stability of the formulation components with the aptamers.
into account parameters such as sequence abundance, stability, Additionally, generative AI could be used to engineer nanometric
and structure. This algorithm represents an alternative way to dosing systems (e.g., liposomes, dendrimers, polymeric nano-
select aptamers from extensive libraries bases on patterns, and it particles, polymeric micelles, and virus-based nanoparticles) to
could help shorten the discovery of new molecules. However, target the release of the aptamers in tissues or cells of interest. In
despite these advances, to date, no work has yet been published this way, it would be possible to reduce potential adverse effects in
that applies AI and ML to the discovery of aptamers directed other organs and help establish appropriate doses based on critical
against Ab, tau, or other proteins related to neurodegenerative pharmacokinetic parameters such as the distribution, metabolism,
diseases. and elimination of the biomolecule and the selected pharmaceu-
The identification and design of specific aptamers for AD- tical form.
associated proteins such as Ab and tau can greatly benefit from the In the future, AI and ML could also help personalise patient
power of ML algorithms. AI models can analyse large molecular treatment by analysing clinical, genetic, and molecular data from
data sets to predict and optimize aptamer sequences that have patients with AD and other neurodegenerative diseases. This
improved affinity and specificity for desired therapeutic targets. In would allow aptamers to be tailored to address the unique char-
this way, the discovery of aptamers can be accelerated, reducing acteristics of the disease in each individual, improving efficacy
time and cost. Currently, obtaining aptamers using the SELEX and reducing side effects.
method takes around 3 months and has an approximate cost of
USD 8000. It is possible that in the short term, through the use of 4. Concluding remarks and future perspectives
AI and ML, the aptamer selection process could be reduced to
weeks or days, and the cost of obtaining them could be less than Current drug therapy has limited effects on disease progression
USD 1000. In this context, it is possible to imagine a scenario and often has side effects such as nausea, diarrhoea or dizziness
where the crystalline structure of monomeric or oligomeric Ab is that are bothersome to patients. AD is a complex entity in which a
presented to the machine. This, in turn, will iterate through large number of genomic, epigenetic, biochemical and cellular
thousands of random DNA sequences and the target protein. The events converge. Therefore, it is unlikely that monotherapy offers
result will be candidates with a high probability of success that any option for a cure, other than slowing the degree and rate of
can subsequently be used to generate aptamers with optimized deterioration of brains with the disease.
physicochemical properties. Thus, minimizing the number of The era of vaccines and mAbs for the treatment of AD and
experimental trials required for their validation. other neurodegenerative diseases is here to stay, and similar bio-
The implementation of AI and ML in the discovery of DNA molecules are expected to be approved in the coming years, with
aptamers can also revolutionise the formulation process and the notable improvements in their pharmacodynamic and
Monoclonal antibodies, aptamers and Alzheimer’s disease 2809

pharmacokinetic characteristics. It is very likely that in the next consent, and equity in access to innovative treatments will become
few years we will see mAbs conjugated with other drugs in the more pressing.
market as warheads capable of attacking several targets simulta-
neously. Nonetheless, despite all the advances made and the new Acknowledgments
molecules discovered with this technology, the risk of excessive
autoimmune or inflammatory reactions, and the interindividual AB-O was funded by Ministerio de Ciencia, Tecnologı́a e Inno-
variability in this response could negatively affect patient’s health, vación de Colombia (Grants No. CT 775-2018, CT 80740-460-
even causing death. Therefore, to enhance the safety of new 2021 and CT 86980-460-2021, Colombia) and Universidad
therapies, it is paramount to fully understand AD at its core and Icesi e Convocatoria Interna (Grant No. CA041370, Colombia).
discover early diagnostic biomarkers that allow targeted and The author thanks Mateo Fotich (Department of Pharmaceutical
personalized therapy. and Chemical Sciences, School of Engineering, Design and
Nucleic acid-based compounds such as aptamers offer a viable Applied Sciences, ICESI University. Cali, Colombia) and Victoria
and interesting alternative to mAbs due to their easy production. Robles (Department of Pharmaceutical and Chemical Sciences,
Although aptamers exhibit high specificity, their long-term sta- School of Engineering, Design and Applied Sciences, ICESI
bility and efficacy in a complex biological environment have yet University, Cali, Colombia) for preparing the figures on the mo-
to be fully validated. Furthermore, it is necessary to comprehen- lecular docking of the aptamers.
sively evaluate the risks of this technology, such as the possibility
of triggering adverse immunological responses. Likewise, it is
Author contributions
essential to address these risks through rigorous preclinical and
clinical studies, as well as continuous safety monitoring in the
Alvaro Barrera-Ocampo carried out the bibliographic review,
implementation of aptamer-based treatments. This in order to
analysis and interpretation of results necessary for the preparation
achieve a careful balance between therapeutic efficacy and the
of the manuscript. Additionally, he wrote the entire document. The
management of possible risks to ensure the safety and well-being
author has approved the final article should be true and included in
of patients.
the disclosure.
Aptamers offer significant promise in the treatment of neuro-
degenerative diseases. On the one hand, they present advantages
over other technologies thanks to flexibility and optimization in Conflicts of interest
their design and the possibility of producing fewer adverse effects
due to their selectivity and specificity. On the other hand, their The author declares no commercial interest that could represent a
successful implementation will require carefully addressing conflict of interest.
challenges such as stability and pharmacokinetic behaviour, the
complexity of the biological environment that can expose them to References
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