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A French science colossus Sundance film picks Using ultrasound to monitor
faces a reckoning p. 1046 for scientists p. 1052 tissue health pp. 1058 & 1096
$15
8 MARCH 2024
science.org
TROUBLE
BELOW
Deepwater sharks threatened
by harvest p. 1135
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8 M A R C H 2 0 24 • VO LU M E 3 8 3 • I S S U E 6 6 87
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1062 Accounting for the increasing
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RESEARCH
IN BRIEF
1068 From Science and other journals
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1071 Neuroscience
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1111
a “giant” cortical presynaptic terminal The bacterium Wolbachia blocks sperm development in the primary spermatocytes of its insect host
D. Vandael and P. Jonas by targeting a long noncoding RNA (shown in cyan in this fluorescence confocal image; nuclei are yellow).
REVIEW SUMMARY; FOR FULL TEXT:
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L
ast month, Duke University in North Carolina an- biodiversity monitoring efforts and revealing knowl-
nounced that it was shuttering its herbarium. The edge gaps where specimen sampling is needed.
collection consists of nearly 1 million specimens The decision by Duke comes at a time when wide-
representing the most comprehensive and his- spread awareness of and access to herbaria are growing
toric set of plants from the southeastern United in tandem. This is principally a result of the large-scale
States. It also includes extensive holdings from digitization of natural history collections, an endeavor
other regions of the world, especially Mexico, that has been extensively supported by governmental
Central America, and the West Indies. Duke plans to agencies and philanthropic organizations worldwide. Charles C. Davis
disperse these samples to other institutions for use or This innovation is arguably one of the greatest trans-
is a professor in
storage over the next 2 to 3 years, but this decision re- formations in biodiversity science since DNA sequenc-
the Department
flects a lack of awareness by academia that such col- ing. In short, creation of the Global Metaherbarium—an
of Organismic
lections are being leveraged as never before. With open-access, global interlinked virtual resource—makes
modern technologies spanning multiple fields of study, physical herbaria discoverable and is attracting new in- and Evolutionary
the holdings in herbaria and other natural history col- terest in the utility of these collections for sophisticated Biology, and
lections are not only facilitating a deeper and broader multiomic investigations (genomics, transcriptomics, Curator of Vascular
understanding of the past and pres- metabolomics, proteomics, and mi- Plants, Harvard
ent world but are also providing tools crobiomics) and for research that con- University Herbaria,
to meet both known and unforeseen nects science with the broader society. Cambridge, MA,
challenges facing humanity. Science
and society can hardly risk the loss of
“…society can Closure of the Duke Herbarium
also points to changes needed in for-
USA. cdavis@oeb.
harvard.edu
such an important resource.
Sadly, Duke is not the first world-
hardly risk the mally recognizing herbaria and other
natural history collections in research
class institution to withdraw support
from, and cease the operation of, its
loss of such initiatives and agendas. Collections in-
creasingly have become the first line
natural history collections. In the
late 1970s and early 1980s, Prince-
an important of genetic and genomic sampling for
investigators who otherwise eschew
ton and Stanford Universities did
the same. Ostensibly, the decisions to resource.” conventional field work. Requests to
destructively sample specimens are
close those collections were made to often central to rapidly expanding big
shift priority to research programs in data initiatives. These requests place
molecular biology and biochemistry, which were con- enormous demands on the institutions and staff who
sidered closer to science’s cutting edge of discovery support collections but who largely go unrecognized for
and able to attract more external funding. Ironically, their crucial work. In turn, users of these collections,
nearly half a century on, biological sciences depart- many of whom are not based at these institutions,
ments at these institutions and comparable ones in benefit from grants and high-profile papers in which
China, Brazil, some regions in Africa, and in most herbaria are only briefly acknowledged, if they are men-
of Western Europe are filled with world-class schol- tioned at all. Scientists who oversee collections should
ars who—knowingly or unknowingly—use herbaria, be fully funded partners in research initiatives. Insti-
zoological collections, and their derivatives every day tutions, herbarium curators, and support staff should
for transformative research published in the highest- be coauthors of studies, with contributions indicated
impact journals. through the Contributor Roles Taxonomy (CRediT)
Herbaria have long been a critical resource for eco- system, for example. Such recognition could help more
logical and evolutionary research but have recently be- directly measure the impact and influence of natural
come relevant to many more fields, including climate history collections on scholarly research.
science, anthropology, genetics, computer science, Universities should support the priceless resources
chemistry, and medicine. Specimens are being mobi- and heritage represented in natural history collections.
PHOTO: KRIS SNIBBE/HARVARD UNIVERSITY
lized to investigate plant–animal and plant–pathogen They also should have the vision to provide for, and
interactions, crop domestication, compounds with po- commit to, the long-term stewardship and robust intel-
tential applications in agriculture and pharmaceutics, lectual environment for open inquiry and deep research
and human migration over time and space. Advances in that these collections provide across generations.
genome sequencing and machine learning are guiding –Charles C. Davis
10.1126/science.ado9732
A 1953 nuclear test in Nevada was among the human activities that could have marked the Anthropocene.
Methane satellite begins work
| The Environmental
C L I M AT E S C I E N C E
Defense Fund (EDF) this week became the
STRATIGRAPHY first nonprofit group to launch a satel-
lite to track methane emission sources.
Anthropocene epoch gets voted down MethaneSAT, funded by EDF donors, is
designed to detect methane emissions in
A
group of two dozen geologists has turned down a proposal to high resolution above known oil-and-gas
classify the Anthropocene as an “epoch” that would mark human- facilities, filling a gap in coverage. Its data
will support efforts to regulate and reduce
ity’s overwhelming influence on the planet, a tally released this
leaks and other sources of the potent
week indicates. For 15 years, researchers had considered desig- greenhouse gas. The group plans to pro-
nating this formal unit of geologic time, and in 2023 they chose a vide the data for free, in nearly real time,
marker of when it started, a layered sediment core from Canada’s at www.MethaneSAT.org.
Crawford Lake that shows a global acceleration in carbon dioxide emis-
sions and atmospheric nuclear weapons testing during the 1950s. But U.K. funder clears diversity panel
PHOTO: NNSA/NEVADA FIELD OFFICE/SCIENCE SOURCE
over the past month, the proposal failed to win a supermajority of votes POLITICS | The United Kingdom’s national
from a panel of the International Commission on Stratigraphy, with funding agency has reinstated its advisory
some members stating that the proposed start date failed to account panel on diversity, equity, and inclusion,
which was suspended in October 2023
for earlier human influences. Barring an unexpected reversal, the for- after science minister Michelle Donelan
mal classification cannot be reconsidered for another decade. But even said members of the newly created panel
opponents of the proposal acknowledge humanity’s potent, transfor- had posted “extremist” views on social
mative effects on Earth and the power of the term Anthropocene, and media about the Israel-Hamas conflict.
This week, UK Research and Innovation
some suggest considering it, like some other great changes in the plan- (UKRI) reported the results of its investiga-
et’s history, a geologic “event”—a usage that requires no formal ratifica- tion into the matter, concluding that the
tion or exact start date. panel members had not violated a code
B
iologists have completed a free, online repository contain- stained before being scanned to reveal internal organs. As of
ing x-ray scans of vertebrate specimens from 16 museum December 2023, the database had received more than 1 million
collections across the United States. The openVertebrate views and nearly 100,000 downloads. The digital collection has
collection, one of the largest of its kind, covers more than already led to new research findings, including unusual bones in
13,000 specimens, including more than half the genera African spiny mice (pictured, with tail colored red) and evidence
of amphibians, reptiles, fishes, and mammals. Led by the Florida that frogs have lost and regained teeth more than 20 times
Museum of Natural History, researchers spent 5 years making during their evolution. Project organizers also trained secondary
computer tomography scans and creating 3D reconstructions; school teachers to use the images for science education. The
most show only the animals’ skeletons, but some samples were project’s impact is described in the 6 March issue of BioScience.
of conduct for public servants or posted the institute is funded only by nonstate Philadelphia-based nonprofit was co-
problematic views. Although Donelan had sources, including its own endow- founded by University of Pennsylvania
asked UKRI to shut down the diversity ment and the university’s foundation. immunologist David Fajgenbaum, who
panel, UKRI’s statement said the inves- A proposal floated earlier would have a decade ago identified a treatment—
tigation concluded the panel’s work is created a new nonprofit organization to sirolimus, which prevents organ
necessary, and it will reconvene. Separately, fund and manage some of the institute’s rejection—for his own rare, life-threaten-
a lawyer for a panel member, Heriot-Watt administrative functions while allow- ing immune condition, Castleman disease.
University gender studies professor Kate ing its faculty and collections to remain
Sang, announced on 5 March that Donelan within the university. But some research-
had agreed to pay Sang an undisclosed ers worried the split would expose the Pesticide database restored
settlement and retract her “false” state- institute to future legislative crackdowns, | The U.S. Geological
AG R I C U LT U R E
ment about Sang’s social media post. The Guardian reported. Survey (USGS) has backtracked on cuts to
a widely used database of approximately
400 agricultural pesticides after pleas
Trustees protect Kinsey Institute Finding new uses for drugs from scientists. The agency had reduced
POLITICS | The Kinsey Institute, the famed C L I N I CA L R E S E A R C H | A nonprofit that the number of compounds tracked in
research center on human sexuality, will seeks to repurpose approved drugs for 2019 by the Pesticide National Synthesis
remain part of Indiana University (IU), new indications will receive more than Project, which documents estimated
despite a 2023 state law that blocks the $48 million from the U.S. Advanced annual application rates, from 400 to 72,
institute from receiving taxpayer dollars. Research Projects Agency for Health to citing budget constraints. Then last year,
IMAGE: OPENVERTEBRATE
Conservative lawmakers targeted the supercharge its work, the agency said USGS halted the annual release of pre-
institute after one claimed its research on 28 February. Every Cure plans to liminary data, opting instead to publish
promotes sexual abuse, an allega- use artificial intelligence to predict the final data every 5 years. Last week, the
tion Kinsey’s defenders call baseless. power of more than 3000 approved drugs agency said it will restore the database’s
Last week, IU’s board of trustees voted against more than 10,000 rare diseases, pre-2019 scope, and data for 2018 to 2022
unanimously to develop a plan ensuring most without effective treatments. The will be published in 2025.
IN DEP TH
ASTRONOMY
By Daniel Clery 8 to 10 meters, showed that many segmented projects failed to amass enough funding.
mirrors or several large ones could be com- So, in 2018 the projects, historically ri-
F
or several years, U.S. astronomers have bined into a much larger effective mirror. vals, joined forces as US-ELTP and made
hoped the government would help build They also demonstrated adaptive optics: us- an offer to NSF. In return for public fund-
a pair of giant ground-based telescopes. ing rapidly deformable secondary mirrors to ing, all U.S. astronomers would have access
But the National Science Board (NSB), cancel out the distortions caused by Earth’s to the telescopes, which would open un-
the panel of scientists that oversees the atmosphere to capture images as sharp as precedented views of the night sky above both
National Science Foundation (NSF), those taken from space. hemispheres, something Europe’s Extremely
says the field can only afford one. At a meet- These technical advances spawned the two Large Telescope (ELT) will not offer (Science,
ing on 22 February, NSB capped the budget of U.S.-led projects: the Giant Magellan Tele- 25 May 2018, p. 839). The 2020 decadal sur-
the U.S. Extremely Large Telescope Program scope (GMT) in Chile and the Thirty Meter vey in astrophysics, which defines the field’s
(US-ELTP) at $1.6 billion and gave the agency Telescope (TMT) in Hawaii. Both are backed priorities for funders and Congress, put US-
until May to come up with a process to choose by consortia of universities, philanthropic ELTP first among ground-based projects, in
one of the two 30-meter class telescopes. foundations, and international partners. But line with the recommendation of a panel led
With a rival European telescope rapidly this privately funded approach, which during by Timothy Heckman of Johns Hopkins Uni-
taking shape on a mountaintop in Chile, the the 20th century produced groundbreaking versity. “We felt this made a compelling case,”
A
state-appointed authority that governs the mutant butterfly for sale on eBay they found a deletion in the region of the
mountaintop and includes both astronomers has helped upend naturalists’ pic- cortex gene. They then realized the miss-
and Native Hawaiians. “We’re working on our ture of how butterfly wings acquire ing DNA included a sequence encoding an
relationships in Hawaii,” says TMT Executive their intricate variety of red, yellow, lncRNA that no one had ever closely exam-
Director Robert Kirshner. “We’re learning white, and black stripes. It and re- ined. Working with painted lady butter-
how to do that in a humble and straight- cent research into other butterflies flies (Vanessa cardui), which have colorful
forward way.” Turner says the impasse may show how visible traits in many animals wings and are easy to breed in the lab, they
not be solved anytime soon. “I’m sure a so- may be controlled by an underexplored ge- used the gene editor CRISPR to disable just
lution will be found, but it may take longer netic regulatory mechanism, based not on the lncRNA’s gene. The edit yielded white-
than people like,” he says. proteins, but on RNA. winged painted ladies, just like the ivory
The GMT, smaller and cheaper, is a lower In 2016, geneticists thought they had Heliconius, they reported on 12 February
risk choice. Its foundations are being laid on pinned much of the wing-pattern variation in a preprint on bioRxiv. Disabling cortex
a mountaintop at Las Campanas in Chile, on a protein-encoding gene called cortex. But had no effect.
while support structures for its mirrors are three teams have now proved that a different Moreover, Livraghi’s team found this
taking shape in the United States. Three of its gene, previously missed because it overlaps same lncRNA also controls black and other
seven 8.4-meter mirrors, the equivalent of a with cortex, is the key. Its
25.4-meter-wide mirror, are already finished; final product is not pro-
the other four are being polished. tein, but RNA that regu-
Because of the risks attached to the TMT, lates genes responsible
Monnier and Ellis suspect NSF will prob- for the pigmentation pat-
ably back the GMT. But with a mirror less terns of black and other
than 40% of the size of its 39-meter Euro- hues on the wings. One
pean rival, the GMT “is no match for ELT,” team also showed the
says Ellis, a former TMT board member. RNA is broken down into
Monnier thinks the GMT will probably be a smaller RNA that fine-
good enough in key astronomy areas, but tunes the production of
NSF will need to judge whether those areas the colors. “They solved
are important for U.S. astronomers. a puzzle that had left
Abandoning either of these very capable everyone in the com-
telescopes will harm U.S. astronomy, says munity wondering,” says
Wendy Freedman at Chicago, one of the Nicolas Gompel, a devel-
GMT’s partner organizations. “The science opmental biologist at the
that will come out really does justify two tele- University of Bonn.
scopes.” Upcoming survey telescopes such as The discovery, de- A gene edit affecting one wing (right) of this Heliconius erato radically
the 8.4-meter Vera C. Rubin Observatory in tailed in three preprints changed its normal color pattern.
Chile will identify a wealth of interesting ob- this month, also rep-
jects in need of follow-up observations by in- resents the first time long noncoding RNA pigmentation in the scales of other butter-
struments on the GMT and the TMT that can (lncRNA), so-called because it does not code fly species, some distantly related. “We have
split the light into information-rich spectra. for proteins, has been linked to the evolution to conclude now that the key regulator is
“That’s what these big telescopes give you,” of a visible trait in animals. “Now we have to an RNA, not a protein,” says Peter Holland,
she says. pay more attention to noncoding RNA,” says an evolutionary biologist at the University
Language in a spending bill passed by Con- Ilik Saccheri, an evolutionary biologist at the of Oxford who was not part of any of the
gress this week “strongly encourages” NSB to University of Liverpool and a member of one new work.
build both telescopes, even though lawmak- of the teams that had focused on cortex. At a conference midway through these
ers cut NSF’s 2024 funding by more than For evolutionary developmental bio- studies, Livraghi learned that a Cornell Uni-
PHOTO: LUCA LIVRAGHI
$800 million, to $9 billion (see story, p. 1043). logist Luca Livraghi, now at George Wash- versity group studying wing color patterns
Freedman hopes the congressional direction ington University, the key break came when in the buckeye butterfly (Junonia coenia),
will prompt a rethink. “The United States will a colleague told him and Joseph Hanly, a common throughout North America, was
sit out the future of astronomy if we don’t get bioinformatician at Duke University, about homing in on this same lncRNA. The two
these telescopes,” she says. j completely white Heliconius butterflies teams decided to coordinate their efforts.
S
velopmental biologists Antónia Monteiro ince the 19th century, scientists at from the deceased or their descendants.
and Shen Tian at the National University the Smithsonian Institution have Research would be permitted without
of Singapore. They were focused on short obtained, studied, and stored more consent on ancient remains that cannot
RNA sequences, microRNAs, known to reg- than 30,000 human remains, one of be linked to any of today’s communities,
ulate gene activity in plants, animals, and the largest such collections in the which are a small percentage of the total.
other eukaryotes—organisms that pack United States. In the past, many re- Other new recommendations in-
their DNA in a nucleus. In the squinting mains were studied in order to justify sci- clude returning as many remains as pos-
bush brown butterfly (Bicyclus anynana), entific racism. Now, the institution should sible by 2030 and barring destructive
a well-studied tropical species, they found rapidly offer to return most of these re- sampling—to analyze DNA, for example—to
that a microRNA was active in the black mains to lineal descendants or descen- identify descendants.
wing pattern, just as Livraghi had found dant communities, according to a report Studies of the remains, such as DNA anal-
for the ivory lncRNA. released last month by an institutional ysis of dental calculus to study pathogens,
When the Singapore team disabled the task force. might be harder to carry out under the new
DNA encoding this microRNA, mir-193, “It’s important to face this past and try to recommendations. Although there’s no of-
bush brown wings became lighter, the repair the harms caused by our institution ficial moratorium, no new human remains
team reported on 12 February in a bioRxiv and so many others,” says Sabrina Sholts, research has been approved in recent years
preprint. Knocking out mir-193 also had curator of biological because of stricter re-
dramatic effects in a distant relative, the anthropology at the Smith- quirements, Sholts says.
Indian cabbage white (Pieris canidia), sonian’s National Museum “This first step towards She expects a pause on
changing its black-patterned wings to of Natural History and approvals while the new
completely white. After learning about member of the task force. a long-overdue reckoning policy is established, but
the lncRNA identified by the two other
groups, Monteiro and Tian concluded that
Most of the Smithson-
ian’s human remains were
makes it more likely notes the report antici-
pates positive outcomes
the longer RNA is broken down to produce collected without proper others will do the same.” from future research.
these microRNA. consent in the early The 15-member task
Sabrina Sholts,
“A lot is happening within this small part 20th century, and many force, including both
National Museum of Natural History
of the genome,” says Violaine Llaurens, acquisitions were part Smithsonian staff and
an evolutionary biologist at the College of of an attempt to prove outsiders, says the insti-
France. She cautions that other regulatory now-debunked notions of white superior- tution should ramp up its efforts to identify
elements probably play a role in butterfly ity. “It’s a collection that should have never both lineal descendants and communities
wing patterns. But the fact that the same been amassed, and we’re committed to dis- of descent and then initiate contact, rather
microRNA fine-tunes coloration in very mantling as much of it as possible,” wrote than waiting for repatriation requests. The
distantly related species is “amazing,” Secretary of the Smithsonian Lonnie Bunch report recommends the Smithsonian re-
says Anyi Mazo-Vargas, an evolutionary III last year in an editorial. quest new funds and staff for the massive
bio-logist at Duke who worked with Reed. The Smithsonian already has a process repatriation effort, but does not say how
She suspects similar RNAs color wings in for repatriating its 15,000 Native American much would be needed.
most, if not all, of the 180,000 species of remains, as a 1989 federal law requires; it “I’m impressed,” says Carlina de la Cova,
moths and butterflies. And because mir-193 has returned more than 5000. Now, the a biological anthropologist at the Univer-
is conserved across the animal kingdom, report urges that the collection’s Indig- sity of South Carolina who is not on the
Monteiro and Tian think noninsects may enous remains be returned more quickly task force. The recommendations “will
also make use of these regulatory RNAs. and that the effort extend to all human re- force scholars working with the dead to
Small RNAs derived from parent mains. It also suggests prioritizing the re- think about how they engage with [re-
lncRNAs affect traits in plants, too, says mains of other marginalized groups, such mains] and what that means for the living.”
Yaowu Yuan, an evolutionary biologist at as the collection’s 2100 African American She adds that it’s the first time a museum
the University of Connecticut whose team remains, as well as the nearly 6000 re- has made such recommendations public,
last year reported that so-called siRNAs mains of people whose names are at least and she expects other institutions to fol-
determine color in monkeyflowers. The partially known. low the Smithsonian’s steps.
RNA realm is expanding, Yuan says. “I The task force applies a bedrock princi- Sholts agrees: “This first step towards
am quite positive that many more similar ple of research on living humans—the need a long-overdue reckoning makes it more
studies will come soon.” j for informed consent—to the remains, a likely that others will do the same.” j
massive DNA data set shows could reduce mutation rates. Gars have also
preserved the arrangement of DNA in their
chromosomes and dampened the effects of
The fish’s genomes change so slowly that species separated so-called jumping genes that can cause ge-
since the dinosaurs can produce fertile hybrids today netic reshuffling as they move from place to
place in the genome. “This goes not just to
sequence changes, but also to chromosome
By Amanda Heidt Using existing family trees for each group, evolution, which would be an interesting av-
they created a massive evolutionary tree. For enue to explore,” Parey says.
I
n 1859 Charles Darwin coined the term each lineage, the researchers estimated the To test their findings, the authors followed
“living fossil” to describe lineages that rate at which each DNA base changed over up on reports of unusual gars that might
have looked the same for tens of millions time—the so-called substitution rate. be natural hybrids in rivers throughout
of years, such as the coelacanth, sturgeon, Surprisingly, they found evolution was Oklahoma and Texas. They analyzed tissue
and horseshoe crab. The term captured not on pause in all living fossils. The coel- samples from dozens of these fish to trace
the popular imagination, but scientists acanth, the elephant shark, and a bird called their ancestry, finding that two gar genera—
have struggled to understand whether such the hoatzin—all considered ancient—have Atractosteus and Lepisosteus—are crossing to
species just resemble their long-ago ances- faster than expected mutation rates of about produce fertile, hybrid young. These groups
tors or have truly evolved little over the eons. 0.0005 mutations at each site per million last shared a common ancestor roughly
Now, in a study published this week in Evo- years, although that was still slower than the 105 million years ago, a record separation
lution, researchers confirm that in some—but average rate for amphibians (0.007 mutations time for eukaryotes that can produce viable
not all—living fossils, evolution is at a virtual per million years) and placental mammals offspring. The gars beat the previous re-
standstill. The most striking examples are (0.02 mutations per million years). The find- cord holders—two species of fern—by about
prehistoric-looking fish called gars, which ings support the idea that some species that 60 million years. (Keen minds may re-
have the slowest rate of molecular evolution still resemble their ancient ancestors have call reports of the sturddlefish, a hybrid of
of all jawed vertebrates. The team also pro- nevertheless changed at a molecular level. paddlefish and sturgeon, which diverged
poses a mechanism to explain gars’ timeless- But gars, big freshwater fish with long, even longer ago, but those accidental hybrids
ness: superb DNA repair machinery. That toothy snouts, were different: In almost every were likely sterile and don’t occur naturally.)
repair has likely kept gar genomes so stable exon, gars had the slowest rates of molecular A next step will be to prove that gars’ DNA
that species whose last common ancestor substitution, often by several orders of mag- repair mechanisms are indeed slowing their
lived more than 100 million years ago have nitude; they averaged only 0.00009 muta- genetic change. By equipping zebrafish—a
diverged very little, and some can still hybrid- tions per million years at each site. Indeed, standard model animal—with gar DNA repair
ize today to produce viable offspring. two genera that diverged roughly 20 million genes, investigators might be able to observe
“That’s amazing,” says Tetsuya Nakamura, years ago had identical sequences at nearly the genes at work. “This will be a challeng-
an evolutionary developmental biologist at all the sites analyzed—a finding the team at ing experiment though, because [DNA repair
Rutgers University. “This paper has a lot of first attributed to sequencing error. “I came genes] are fundamental,” Nakamura says.
interesting work into this question of what into this project cautious about using the But the authors say understanding how
makes a living fossil, but when I read that, I term living fossil,” says study co-author Chase gars keep their mutation rate so low could
was shocked.” Brownstein, an evolutionary biology Ph.D. have additional payoffs. For example, such
PHOTO: SOLOMON DAVID
To see whether several putative living fos- student at Yale University. “But for gars at insights might help humans better under-
sils evolve more slowly than other vertebrate least, it’s an appropriate term.” stand our own DNA repair pathways, which
groups, the team gathered published se- The authors posit that because gar mu- can lead to cancer when they fail. j
quences from more than 1100 exons (the cod- tation rates seem consistently low across
ing regions of the genome) across 478 species. sites—including in genomic regions un- Amanda Heidt is a science journalist in Utah.
Brazil is hoping and waiting for localities in Brazil so far, and the results
are encouraging. Niterói, a city of half a
million where the mosquitoes have been
a new vaccine as dengue rages deployed since 2015, has seen only 58 con-
firmed cases so far this year, compared with
9355 in nearby Rio de Janeiro, with almost
A locally produced vaccine did well in a phase 3 clinical trial 7 million inhabitants. The mosquitoes will
but won’t be available until at least 2025 soon be deployed at more sites, but scaling
up the strategy nationwide is a tall order.
The same is true for the release of sterile
By Marcia Triunfol vaccinate only 3.3 million people this year, male mosquitoes, which mate with females
in a country of more than 220 million. but don’t produce offspring, causing the
W
hen dengue started to circulate A locally produced vaccine could prove to population to crash. One group of Brazil-
in his small town in the state be better and cheaper, but it will be avail- ian researchers has created such insects
of Rio Grande do Sul in Brazil, able in 2025 at the earliest. “We are fre- not with radiation, the usual practice, but
Fabio Vilella’s first thought was netically working against time,” says Esper with a cheaper treatment consisting of a
that he should get his 13-year- Kallas, director of the Butantan Institute, chemical and a bit of double-stranded RNA
old son vaccinated. Children are which is developing the shot. Brazil has em- that silences a gene involved in male fertil-
especially vulnerable, and his son had den- braced new control strategies for the Aedes ity. An experiment in the city of Ortigueira,
gue before, which increases the risk of se- aegypti mosquitoes that transmit dengue, in Paraná state, between 2020 and 2022
vere disease. But Vilella, an environmental but scaling them up will take time as well. resulted in 97% fewer dengue cases when
biologist, soon made a startling discovery: The dengue virus, which comes in four compared with control cities, the research
Not a single private clinic or pharmacy in different varieties, or serotypes, can cause team reported last year.
the country had any vaccine left. “I’m really high fevers, headaches, painful joints and Vaccination is the other promising new
worried,” he says. muscles, and rash. In some cases it can lead strategy. Takeda’s two-dose vaccine, named
Brazil is seeing an unprecedented surge to severe abdominal pain, bleeding, and Qdenga and designed to protect against
in dengue, a viral disease that can cause death. This typically occurs when a person all four serotypes, contains an attenuated,
excruciating pains and is sometimes fatal. is infected for the second time with a dif- or weakened, strain of one serotype as a
An unusually hot rainy season, along with ferent serotype, in a phenomenon called “backbone” with genes from the other three
rapid, unplanned urbanization, have fueled antibody-dependent enhancement. Brazil’s added to it. In trials, the vaccine had an
its spread this year. Health officials have Ministry of Health expects more than 4 mil- overall efficacy of 64.2% in people who had
reported more than 1 million suspected lion dengue cases this year, which would be dengue before and 53.5% in those who were
cases in January and February, four times a record. Other South American countries never exposed to the virus.
as many as in the same period in 2023, and are seeing an uptick in cases as well. In February, Brazil’s public health ser-
PHOTO: LUIS NOVA/AP
hundreds have died. But the country has far Dengue is notoriously hard to control. vice (SUS) started a campaign to vaccinate
too little vaccine to protect its population. A. aegypti thrives in cities, where water- 10- and 11-year-old children, the group most
The government cut a deal last year with filled flower pots, buckets, or discarded at risk of hospitalization from dengue. But
the Japanese manufacturer Takeda Pharma- tires make ideal breeding spots. “The mos- because Brazil is only expecting 6.6 million
ceuticals, but it will receive doses to fully quito loves a water tank in the shade,” says Qdenga doses this year, SUS is only target-
S
gue researcher at the U.S. Centers for Dis- cientists, prepare to tighten your belts. At NSF, a budget that is $2.3 billion less
ease Control and Prevention, because some This week, the U.S. Congress is ex- than the $11.3 billion it requested will force
people never get their second dose. pected to approve six 2024 spending hard choices. Last year, Congress fattened
In a trial in Brazil among 16,235 people bills that call for sizable cuts or essen- NSF’s budget with so-called emergency
between ages 2 and 59, published last month tially flat budgets at a number of major spending and funds earmarked for the
by The New England Journal of Medicine, the federal research agencies. agency’s new Technology, Innovation and
vaccine offered 89.5% and 69.6% protection, The National Science Foundation (NSF) Partnerships (TIP) directorate, aimed at
respectively, against two serotypes, DEN-1 is the biggest loser, with lawmakers cutting commercializing discoveries. Congress envi-
and DEN-2, during the first 2 years after im- its budget to $9.06 billion, 8.3% below 2023. sioned TIP growing rapidly when it created it
munization. There are no efficacy data on NASA’s science programs will fall by 5.9% to in 2022, but this year lawmakers told NSF it
DEN-3 and DEN-4 because no cases were $7.3 billion. Congress also cut research spend- needn’t give it special treatment. As a result,
seen in the study, which is continuing. ing at the Environmental Protection Agency, TIP will compete with the agency’s other re-
But all four weakened serotypes in the the U.S. Geological Survey, and the National search directorates for cash.
vaccine replicated in more than 50% of vac- Institute of Standards and Technology. Sci- At NASA, a 15% cut in the agency’s plane-
cinated individuals who never had dengue, ence programs at the National Oceanic and tary sciences program, to $2.7 billion, reflects
notes Andre Siqueira of the Oswaldo Cruz Atmospheric Administration and the Depart- growing unease in Congress about the rising
Foundation. That suggests the Butantan vac- ment of Agriculture remain flat. costs of several key missions, especially Mars
cine will provide sustained protection for all The Department of Energy’s (DOE’s) Office Sample Return (MSR)—an audacious plan to
serotypes, he says. It is expected to be cheaper of Science was one bright spot, getting a 1.7%, ferry soil and rock back to Earth that could
than Qdenga as well. “Once Butantan-DV is $140 million increase to $8.24 billion. But cost up to $11 billion. The Senate proposed
approved and available, the Qdenga vaccine observers note that boost won’t allow DOE’s killing MSR, but the final bill instead allows
will be history,” Mello Galliez predicts. spending to keep pace with inflation. NASA to spend $300 million to $949 million
Butantan hopes to apply for approval The bleak numbers are “frankly on the mission this year. But given the over-
to ANVISA, Brazil’s regulatory agency, by unconscionable in an era when we should all cut to the planetary science budget, it is
September, Kallas says. Vaccinating the be enhancing support for U.S. scientists and not clear that NASA could reach the higher
target population nationwide—those be- engineers,” says Matt Hourihan, a science amount without cutting other missions.
tween 2 and 60 years old—would take some policy specialist at the Federation of Ameri- NASA could soon release a revised MSR plan.
140 million doses, Kallas says, but he de- can Scientists. At a NASA advisory meeting this week,
clines to speculate how long that would The six bills, which lawmakers had to pass Lori Glaze, the agency’s planetary science
take: “I don’t want to create expectations.” by 8 March to avoid a partial government chief, lamented the budget outlook. “This is
Even after its introduction, the vaccine shutdown, mark major progress in resolving going to be a challenge,” she said. “We are al-
will be watched closely. The first approved a lengthy impasse over federal spending for ready feeling the effects.”
dengue vaccine, produced by Sanofi, did fiscal year 2024, which began on 1 October One item that did not make it into the
appear to trigger antibody-dependent en- 2023. Stopgap measures to keep the govern- final bills was a provision, backed by House
hancement, like the virus itself, in children ment running largely froze agency budgets at Republicans, that would have blocked the
in the Philippines who never had dengue 2023 levels. Reaching a final deal was compli- White House from implementing a 2021
before and became infected after vaccina- cated by a tight spending cap that the White policy to promote public access to scientific
tion. The country has since banned the vac- House and Congress agreed to last year in or- papers and data. Starting in December 2025,
cine. So far, there are no clear signs of the der to prevent the government from default- the policy requires federal grantees to deposit
phenomenon with either the Takeda and ing on its debt. manuscripts of peer-reviewed journal papers
Butantan shots, but it will take more follow- The bills meld measures approved earlier in free, public repositories immediately upon
up to be sure. by the House of Representatives and the Sen- publication, a change from a policy, favored
“Controlling dengue is very hard,” Paz- ate. They guide $460 billion in spending, by publishers, that has allowed embargoes
Bailey says. But she believes vaccination, or about one-quarter of the $1.7 trillion the of up to 12 months. Lawmakers did call for
new mosquito control strategies, and con- nation will spend this year on so-called dis- an “in-depth” study of the costs of complying
tinued education will eventually help coun- cretionary domestic and military programs with the new policy; the White House has al-
ter the disease’s surge. “I’m optimistic about (which do not include mandatory programs ready issued two such analyses. j
the future,” she says. j such as Social Security). Congress is now rac-
ing to finish the remaining six spending bills With reporting by Jeffrey Brainard, Jeffrey Mervis,
Marcia Triunfol is a science journalist in by 22 March. Those bills will set spending for David Malakoff, Robert F. Service, Erik Stokstad, and
Lisbon, Portugal. the National Institutes of Health and the De- Paul Voosen.
BIOMEDICINE
By Jon Cohen issues. The company’s original COVID-19 dred people and had a placebo control.
mRNA vaccine used the same dose and has “We’ve hit this rather miserable bump in
O
ne of the most promising attempts also been linked to skin problems, although the road,” Bekker says.
to reinvigorate the stalled quest for at much lower frequencies, of 1% to 3%. (The Multiple research groups are pursuing
an HIV vaccine has hit a snag that Pfizer-BioNTech collaboration’s COVID-19 similar strategies to create bnAbs. Moderna’s
might seem minor but has major con- vaccine, also based on mRNA but given at effort grew out of a project led by biophysicist
sequences: delaying the larger trials a 70% lower dose, triggers skin problems, William Schief, who developed it at Scripps
needed to show whether the concept too, but one Swiss study suggests they occur Research and then brought the strategy to the
works. In small safety and immune tests of 20 times less frequently than with the Mod- company, where he is now a vice president. It
the innovative vaccine strategy, which re- erna product.) A cumulative effect from mul- exploits the fact that B cells begin as naïve, or
lies on a series of messenger RNA (mRNA) tiple mRNA shots, the genetic background of germline, cells and then during an infection
shots, an unusually high percentage of re- the recipients, or the HIV sequences used for undergo a series of mutations that, in effect,
cipients developed rashes, welts, or other the vaccine could also be responsible for the hone the ability of the antibodies they pro-
skin irritations. welts and hives, and those possibilities are duce to bind to specific parts of viruses and
“We are taking this very seriously,” says more worrisome. “neutralize” their ability to infect cells. The
Carl Dieffenbach, head of the Division of Most of these skin problems resolved “germline targeting” vaccine strategy relies
AIDS at the National Institute of Allergy and quickly and none were severe enough to on several shots to take B cells through this
Infectious Diseases (NIAID), which funded a stop a trial, but researchers do not want maturation process, eventually leading them
trial of the vaccine. Researchers want to un- to produce bnAbs against viruses.
derstand the cause of the skin problems and “We call it priming, shepherding, and
how to lessen them before expanding tests of polishing,” explains Dennis Burton, an
the vaccines, which are made by Moderna. immunologist at Scripps who works with
“We would be moving more quickly if this Schief. Initially the group did not use mRNA.
finding had not been observed,” says Mark Its vaccine contained a small piece of HIV’s
Feinberg, who heads IAVI, a nonprofit that is viral surface protein attached to a nano-
the vaccine’s major sponsor. particle that presented it to the immune
The complex vaccine strategy involves system in a novel way, and early results were
injections of different mRNAs, encoding promising. In a 2022 Science paper, Schief
various pieces of HIV’s surface protein or and colleagues reported that 97% of the
the entire molecule, over the course of sev- 36 people who received the vaccine devel-
eral months. The goal is to gradually guide oped B cell antibody gene mutations that are
the immune system’s B cells to produce so- first steps toward making bnAbs.
called broadly neutralizing antibodies, or Schief switched to mRNA because it
bnAbs, capable of stopping many different A vaccine strategy aims to create multiple, powerful provides far more flexibility, allowing the
variants of the AIDS virus. People living antibodies (various colors) that can attach researchers to readily fine-tune the HIV
with HIV on rare occasions eventually pro- to different parts of HIV’s surface protein (gray). component of the vaccine. Because of the
duce bnAbs, but no vaccine has ever done enormous diversity of HIVs in circulation,
so—which has become the “holy grail” for to minimize them. “At a time when vaccine he contends that an effective vaccine likely
the field, says Linda-Gail Bekker, an AIDS hesitancy is high, it is critically important will have to trigger production of up to five
vaccine researcher in South Africa who runs not to dismiss urticaria as an unimportant different bnAbs. That would mean prim-
the Desmond Tutu HIV Centre at the Uni- side effect,” says Kimberly Blumenthal, an ing, shepherding, and polishing multiple B
versity of Cape Town. allergist at Massachusetts General Hos- cell lineages. Without the easy-to-modify
Different versions of this HIV vaccine have pital who has also found a link between mRNA, Schief says, “good luck—that is a
already gone through three phase 1 trials, but Moderna’s COVID-19 vaccine and higher daunting, daunting task.”
they totaled fewer than 200 participants. The rates of urticaria. NIAID now plans to repeat the phase 1
PHOTO: LARS HANGARTNER AND CHRISTINA CORBACI
recipients responded with B cells making Feinberg agrees the side effect issue needs trials of these Moderna HIV vaccines with
antibodies with some features of known studying, but is also concerned that people a lower dose. Bekker, who lives in a country
bnAbs, fueling hopes for the vaccines. But who are vaccine opponents might mis- that has more people living with HIV than
skin problems—including urticaria (hives), represent the scope of the problem. “This any other, is still hopeful the approach will
pruritus (itching), and dermatographism finding has not been seen to the same fre- pan out. “We’ve got to chapter one of an
(welts after scratching)—occurred at a notice- quency with other mRNA vaccines against exciting novel.” After decades of failed at-
ably high level in all of the studies, affecting other pathogens,” he says. tempts to develop an HIV vaccine, the goal
11 out 60 people in one of them. Had the skin problems in the HIV tri- remains pressing, she says. “Last year, the
These HIV vaccines deliver a relatively als not surfaced, the researchers would world had 1.3 million infections of HIV. I
high dose of mRNA, which Moderna scien- have moved closer to conducting—or even think it remains an urgent requirement to
tists and others think could explain the skin launched—a study that involved a few hun- find a good solution.” j
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FEATURES
THE RECKONING
Didier Raoult and his institute found fame during the pandemic.
Then, a group of dogged critics exposed major ethical failings
By Cathleen O’Grady
W
ith six studies published how French biomedical law works. He says
in the 2010s, French micro- he’s followed ethical regulations and that
biologist Didier Raoult added much of the research under fire has been on
to his already vast publication “human waste”—such as fecal matter—which
record. He and his colleagues is not defined as biomedical research under
conducted a wide range of French law.
investigations into infectious But the ethical failings are “not dis-
diseases and their treatments. puted” within the scientific community, says
They took stool samples from Philippe Amiel, a lawyer who specializes in
patients on long-term antibiotic treatment, human experimentation. The authorities
looking for alterations in their gut micro- have known about problems at the IHU for
biome. They swabbed the throats of pilgrims years, adds Karine Lacombe, an infectious
leaving France for Mecca, searching for evi- disease specialist at Sorbonne University. If
dence of a bacterium that causes brain ab- they had acted earlier, she says, “the picture
scesses. And they studied samples of heart of the pandemic in France would have been
valves and blood clots from patients with totally different.”
heart inflammation to refine tests for the A criminal investigation of Raoult’s insti-
bacteria that cause the condition. tute is now underway. But his critics are ask-
But in January, the American Society for ing why French institutions took so long to
Microbiology (ASM) journals that published tackle systemic violations at the IHU, leaving
the papers announced they were retracting it to a persistent group of outsiders to inves-
all six, along with a seventh by Raoult’s col- tigate the institute and push for punitive ac-
leagues. Aix-Marseille University had inves- tion. And they are wondering whether Raoult
tigated the research, which was done at its and the institute will be held to account for
affiliated Hospital Institute of Marseille Med- the wide range of lapses they have alleged.
iterranean Infection (IHU), a research hos- “It’s a big, big mess,” Lacombe says.
pital that Raoult led until his retirement in
2021. The investigation found the work had RAOULT IS BEST KNOWN for his work on
not been reviewed by one of France’s highly rickettsia—bacteria transmitted by fleas
regulated national ethical committees. It was and ticks—and his discovery of giant vi-
therefore in violation of French law and the ruses. He has accumulated national decora-
Declaration of Helsinki, an international eth- tions in both France and his birth country
ics document that guides clinical research. of Senegal as well as prestigious scientific
In a written statement sent to Science, awards, including the 2010 Grand Prize
Raoult says ASM retracted the papers with- from the French biomedical research
out accounting for his team’s rebuttals to agency INSERM. He has published prolifi-
the critiques. But to Lonni Besançon, the re- cally, with more than 3200 papers indexed
tractions are vindication of concerns that he on PubMed, and is one of the most highly
and others have been voicing since Raoult cited researchers in his field.
and the IHU burst into the media spotlight In 2011, Raoult was selected to lead
in the early days of the COVID-19 pandemic, the newly created IHU in Marseille, one
downplaying its severity and touting pros- of six state-of-the-art research hospitals
pects for a successful treatment. established by then-President Nicolas
The Linköping University computer sci- Sarkozy’s government. Raoult’s IHU, which
entist and his fellow critics—a gaggle of specializes in infectious disease research,
dogged individuals, many of them academic was launched with a €72 million govern-
outsiders—originally set out to challenge ment grant, and in 2018 it moved into an
PHOTO: CREDIT GOES HERE AS SHOWN; CREDIT GOES HERE AS SHOWN
poor-quality research coming out of the IHU, imposing new building. The institute’s
especially the claim that COVID-19 could be power is political as well as scientific, says
treated with the antimalaria drug hydroxy- Michel Dubois, a sociologist of science at
chloroquine (HCQ). But they soon embarked the French national research agency CNRS:
on an all-consuming attempt to raise the “When you open this institute—when you
alarm about ethical failings in the institute’s create a building—you need some leverage
ILLUSTRATION: SARA GIRONI CARNEVALE
A slow-motion downfall
Critics first raised concerns about ethical approvals for Didier Raoult’s studies in early 2020, as the COVID-19 pandemic catapulted the Hospital Institute
of Marseille Mediterranean Infection (IHU) to prominence. They say French authorities and journals have taken far too long to react.
2020 2021
25 March 26 March Early April 30 October
Mathieu Molimard and French French health minister Tipster alerts French Pharmaceutical company
Society of Pharmacology begin Olivier Véran allows drug safety agency to Sanofi reports that
posting online about HCQ HCQ to be prescribed ethical concerns in the IHU continues to
ineffectiveness and risks. to COVID-19 inpatients. HCQ research. place large HCQ orders.
»Niin se on vaarallista…»
Seuraavana päivänä Hanna sai kirjeen. Hän arvasi heti, että se oli
Ballmannilta, ja aukaisi nopeasti kuoren. Paperi vapisi hänen
kädessään, kun hän luki:
Ewald Ballmann.»
»Nyt kai olen pakotettu antamaan itseni ilmi, täti?» sanoi Hanna
luettuaan kirjeen ystävälleen. »Minusta on vain hiukan harmillista
alentua mustatukkaisesta, 'sielukkaasta' Janesta vaaleakiharaiseksi,
kevytmieliseksi Hannaksi…»
»Niin, en koskaan olisi luullut elämän olevan niin ihanaa. Mutta nyt
minä menen ja jätän tohtorin teille.»
»Ah!»
»Mitä te sanoitte?»
»Sanoin 'ah'…»
»Ero?» toisti Ewald. »Voiko ajatella eroa, kun tuskin vielä lausutut
sanat 'minä rakastan sinua' ovat huulillani? Tai vihaatteko minua,
halveksitteko minua? Onko tieto rikollisesta vaitiolostani voinut
sammuttaa eilisen rakkaudenhehkun?»
Ewald hätkähti.
»Niin. Ja mikä vielä pahempi, minua ei ole hyljätty, vaan olen itse
hyljännyt. Siitä on noin kymmenen vuotta sitten kun viimeksi näin
mieheni…»
»Vai niin, oletko sinä täällä, Jane? Ah, hyvää huomenta, herra
Ballmann!»
»Jane, Jane… rakas lapsi! Minunkin täytyy kiittää sinua siitä ilosta,
minkä olet minulle suonut. Nouse ylös, rakkaani! Älä myöhästy
junasta. Kas, tässä on kirje, joka sinun tulee ottaa mukaasi. Lupaa
minulle, ettet avaa sitä, ennenkuin miehesi on jälleen puolisosi.
Lukekaa se yhdessä.»
»Minä tuntisin kai niin, jos asiat olisivat sillä tavoin kuin luulet.
Mutta sinä et voi tietää mikä minua huolestuttaa, ennenkuin olen
puhunut suuni puhtaaksi. Anna minun ensin kuitenkin tehdä sinulle
joitakuita kysymyksiä ja lupaa minulle, että vastaat niihin
totuudenmukaisesti.»
»Minä en ymmärrä…»
»Ja tuota voit uskoa, Jane?… Tänä hetkenä voit luulla sen olevan
mahdollista?»
*****
»Rakkaat lapseni!