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EDITORIAL BOARD

Professor Erik J. Sorensen


Department of Chemistry
Frick Laboratory
Princeton University
Washington Road
Princeton, NJ, USA

Professor Dirk Trauner


Department of Chemistry
New York University
100 Washington Square East
New York, NY, USA

Professor Frederick G. West


Department of Chemistry
University of Alberta
Gunning-Lemieux Chemistry Centre E3-43
Edmonton, Alberta
Canada

Professor Craig M. Williams


School of Chemistry and Molecular Biosciences
University of Queensland Brisbane
Queensland, Australia

Professor Pauline Chiu


Department of Chemistry
The University of Hong Kong
Pokfulam Road, Hong Kong

Dr. Jean Suffert


Universite de Strasbourg
Faculte de Pharmacie
Laboratoire d’Innovation Therapeutique
Equipe SOMP
(UMR 7200 CNRS/UDS)
Illkirch Cedex, France
Strategies and Tactics
in Organic Synthesis

Volume 15

Edited by
Michael Harmata
University of Missouri,
Columbia, MO, United States
Elsevier
Radarweg 29, PO Box 211, 1000 AE Amsterdam, Netherlands
The Boulevard, Langford Lane, Kidlington, Oxford OX5 1GB, United Kingdom
50 Hampshire Street, 5th Floor, Cambridge, MA 02139, United States
Copyright © 2021 Elsevier Inc. All rights reserved.
No part of this publication may be reproduced or transmitted in any form or by
any means, electronic or mechanical, including photocopying, recording, or any
information storage and retrieval system, without permission in writing from the
publisher. Details on how to seek permission, further information about the Publisher’s
permissions policies and our arrangements with organizations such as the Copyright
Clearance Center and the Copyright Licensing Agency, can be found at our website:
www.elsevier.com/permissions.

This book and the individual contributions contained in it are protected under
copyright by the Publisher (other than as may be noted herein).
Notices
Knowledge and best practice in this field are constantly changing. As new research and
experience broaden our understanding, changes in research methods, professional
practices, or medical treatment may become necessary.
Practitioners and researchers must always rely on their own experience and knowledge
in evaluating and using any information, methods, compounds, or experiments
described herein. In using such information or methods they should be mindful of
their own safety and the safety of others, including parties for whom they have a
professional responsibility.
To the fullest extent of the law, neither the Publisher nor the authors, contributors, or
editors, assume any liability for any injury and/or damage to persons or property as a
matter of products liability, negligence or otherwise, or from any use or operation of
any methods, products, instructions, or ideas contained in the material herein.
Library of Congress Cataloging-in-Publication Data
A catalog record for this book is available from the Library of Congress

British Library Cataloguing-in-Publication Data


A catalogue record for this book is available from the British Library
ISBN: 978-0-12-822212-6
ISSN: 1874-6004

For information on all Elsevier publications visit our website at


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Publisher: Susan Dennis


Acquisitions Editor: Emily McCloskey
Editorial Project Manager: Susan Ikeda
Production Project Manager: Paul Prasad Chandramohan
Cover Designer: Alan Studholme
Typeset by TNQ Technologies
Dedication

This volume is dedicated to the memory of


my collaborator and friend, Victor Snieckus,
August 1, 1937eDecember 18, 2020.
Contributors

Wen-Ju Bai, Amgen Research, One Amgen Center Drive, Thousand Oaks, CA, United
States
Korey Bedard, Brock University, St. Catharines, ON, Canada
Tanner W. Bingham, Department of Chemistry, University of Illinois, Urbana, IL,
United States
Gaëlle Blond, Université de Strasbourg, CNRS Strasbourg, France
Reinhard Brückner, Institut für Organische Chemie, Albert-Ludwigs-Universität,
Freiburg, Germany
Eric M. Ferreira, Department of Chemistry, University of Georgia, Athens, GA,
United States
Saswata Gupta, Department of Chemistry, University of Illinois at Chicago, Chicago,
IL, United States
Lucas W. Hernandez, Department of Chemistry, University of Illinois, Urbana, IL,
United States
Tomas Hudlicky, Brock University, St. Catharines, ON, Canada
Stephen K. Jackson, OmegaChem, Lévis, QC, Canada
Phil C. Knutson, Department of Chemistry, University of North Carolina at Chapel
Hill, Chapel Hill, NC, United States
Julia Kopp, Institut für Organische Chemie, Albert-Ludwigs-Universität, Freiburg,
Germany
Daesung Lee, Department of Chemistry, University of Illinois at Chicago, Chicago, IL,
United States
Christopher C. McAtee, Department of Chemistry, University of Michigan, Ann
Arbor, MI, United States
Ryan P. Murelli, Department of Chemistry, Brooklyn College, The City University of
New York, Brooklyn, NY, United States; PhD Program in Chemistry, The Graduate
Center, The City University of New York, New York, NY, United States; PhD
Program in Biochemistry, The Graduate Center, The City University of New York,
New York, NY, United States
Eric T. Newcomb, Pfizer Boulder Research and Development, Boulder, CO, United
States
Thomas R.R. Pettus, Department of Chemistry and Biochemistry, University of
California, Santa Barbara, CA, United States

xv
xvi Contributors

David Sarlah, Department of Chemistry, University of Illinois, Urbana, IL, United


States
Corinna S. Schindler, Department of Chemistry, University of Michigan, Ann Arbor,
MI, United States
Jean Suffert, Université de Strasbourg, CNRS Strasbourg, France
David R. Williams, Department of Chemistry, Indiana University, Bloomington, IN,
United States
Xu Zhu, Department of Chemistry, University of Michigan, Ann Arbor, MI, United
States; College of Pharmacy, Xuzhou Medical University, Xuzhou, Jiangsu, China
Preface

How did he manage to retain his youth? Victor Snieckus appeared to be


eternally young and forever filled with enough energy to make many who were
younger be somewhat envious. He was old enough (barely) to be my dad, but
he often seemed like an older brother. He had a twinkle in his eye. Yet with all
that vim, vigor, and mischief, he was in many ways old school. He demanded
rigor in scientific thought and action, and he was very serious about organic
chemistry. One could not turn out bad trying to emulate him. It was a sad day
when I recently learned he had died. I felt it keenly as a personal loss; I wanted
more time to talk with him, learn more about him, and learn more about
chemistry from him. Vic, Kenneth Wärnmark, and I had a collaboration
involving Tröger’s base that continued nearly 15 years in total, with the latest
publication in our series appearing in mid-2020 in ARKIVOC. This was a
highlight of my professional life.
A little over a month before he died, Vic sent me and several others an
email with a link to a skit from Stephen Colbert’s show celebrating the defeat
of Trump. It was great. The cruelty, lies, and incompetence had been driven
from office, by a clear majority, yet far too few, of my fellow Americans. Still,
the deed was done, and Vic celebrated. So did I.
Vic did not live to see the tragedy of 1/6/21 in the United States, a day on
which many US citizens hoped to defeat the electoral process because of their
addiction to lies and their fear of true suffrage for all, and mostly their fear of
the loss of white supremacy. But in all fairness, the idea of superiority, caste,
class.whatever you wish to call it.is not unique to the United States. It is
everywhere, sometimes overt, always covert. Purging ourselves of this poison
is not a trivial task.
Vic also did not live to see a change in Senate leadership in the United
States. I have no doubt that he would have been pleased by this, a chance for
the United States to begin to redeem itself after 4 years of leadership which
treated lies as facts for the sake of power, and did everything in its power to
reject reason, whether in the form of science or just simple common sense.
Were I Canadian as was Vic, I would have been quite concerned about the
monsters living in my basement over the last 4 years. As it was, I was just
depressed to be in a country that had a sociopath as a leader with a huge
number of mindless zealots following him, many worshiping a Jesus Christ

xvii
xviii Preface

wrapped in a US flag, carrying an AR-15. Sick but dangerous people. Here’s to


creating a civil and just society for all. Vic would have wanted this, I believe.
Now, on to some science. In case it is not known, this is going to be my last
Strategies and Tactics in Organic Synthesis. Trying to get authors for the series
has been a serious challenge, a problem with which I no longer desire to be
afflicted. Hydrocortisone and sitz baths do not help. A perk arising from that
decision is that I got to fire the entire editorial board. Am I president yet? I
didn’t think so. In any case, it has been a pleasure to bear witness to volumes
of beautiful, stimulating chemistry over these many years.
I do want to thank all those who contributed to this volume. My hope to go
out on a bang with a record number of chapters was thwarted by SARS-CoV-2
and the havoc it has and is wreaking even at this writing, but some colleagues
got in under the wire and others battled, at least one, through a COVID
infection, to deliver some nice science. Synthesis survives. Let’s make sure it
lives on for a long time by ensuring that interest and funding in the area re-
mains vibrant. Experience has led me to think that synthetic chemists are their
own worst enemies with respect to the latter. Retain high standards, but take
good care in doing so. Our dedication to helping the community through
helpful, constructive reviewing is crucial.
I would like to thank Elsevier for their continued commitment to this se-
ries. I pushed Academic Press many years ago to reboot this series and suc-
ceeded. It was great while it lasted. I have had the opportunity to work with
some wonderful people at Elsevier. Susan Ikeda and Emily McCloskey have
been key to the success of the series. I am grateful for their help and support.
Finally, I want to mention the National Science Foundation of the United
States, without which I would not have had the pleasure of engaging in
research. Their support enabled me to take on projects like this and I am
thankful.

Michael Harmata
January, 2021
Chapter 1

Amaryllidaceae isocarbostyril
alkaloids
Tanner W. Bingham, Lucas W. Hernandez and David Sarlah*
Department of Chemistry, University of Illinois, Urbana, IL, United States
*Corresponding author at: sarlah@illinois.edu.

Chapter Outline
1. Introduction 1 4. Narciclasine and lycoricidine 33
2. Synthetic strategy 12 4.1 Optimization of Ni(II)
2.1 Retrosynthetic analysis 12 conditions 33
2.2 Development of the 4.2 Initial synthesis of
dearomative narciclasine 36
carboamination reaction 12 4.3 Scalable route to
2.3 Mechanistic hypothesis 17 (þ)-lycoricidine (3) and
2.4 Optimization of our new (þ)-narciclasine (4) 40
nickel-catalyzed 4.4 Synthesis and biological
conditions 19 evaluation of C-7 analogs 42
3. Pancratistatins 21 4.5 Metabolic studies 46
3.1 Initial investigations 21 5. Conclusion 46
3.2 Optimizing the route 24 Acknowledgments 49
3.3 Methods for lactam References 49
formation 27 Further reading 52
3.4 C-7 oxidation and final
route 31

1. Introduction
The anticancer properties of crude plant extracts from the Amaryllidaceae
family have been recorded in the literature since the time of the ancient Greeks,
with Hippocrates prescribing Narcissus oils for the treatment of uterine tumors.1
Recently, the therapeutic effects of these extracts have been attributed to the
isocarbostyril alkaloids (þ)-7-deoxypancratistatin (1), (þ)-pancratistatin (2),
(þ)-lycoricidine (3), and (þ)-narciclasine (4) (Fig. 1.1). The first of this family
Strategies and Tactics in Organic Synthesis. https://doi.org/10.1016/B978-0-12-822212-6.00004-7
Copyright © 2021 Elsevier Inc. All rights reserved. 1
2 Strategies and Tactics in Organic Synthesis

OH OH
2
HO OH OH
1 3
10
9 10a 4a 4 O
O OH O 10b OH
NH 6 NH 5
O NH
O O 8 6a
7
R O O R O
(+)-7-deoxypancratistatin (1, R=H) (+)-lycoricidine (3, R=H)
(+)-pancratistatin (2, R=OH) (+)-narciclasine (4, R=OH)

FIGURE 1.1 The Amaryllidaceae isocarbostyril alkaloids (þ)-deoxypancratistatin (1), pan-


cratistatin (2), (þ)-lycoricidine (3), and (þ)-narciclasine (4) and their numbering.

to be isolated, (þ)-narciclasine (4), was initially investigated for its growth


inhibitory effects in plants, as placing a cut daffodil in a vase with other flowers
significantly shortens their vase life.2 After exhibiting potent antimitotic activity
against mouse sarcoma 180 cells,2 (þ)-narciclasine’s structure (4) was
determined by chemical degradation studies3 and was eventually determined by
X-ray diffraction analysis of the corresponding tetraacetate.4 The promising
activity of (þ)-narciclasine (4) prompted much interest in the isolation of other
isocarbostyril alkaloids in its family; (þ)-7-deoxynarciclasine or (þ)-lycor-
icidine (3) was eventually isolated from various species, including Hymenocallis
littoralis, which contained another structurally similar isocarbostyril, (þ)-pan-
cratistatin (2).5 These alkaloids, along with another congener, (þ)-7-
deoxypancratistatin (1), have all shown similar growth-inhibitory properties to
that of (þ)-narciclasine (4).
These interesting findings prompted Pettit and coworkers to measure the
cytotoxicity of these compounds against the NCI’s panel of 60 human cancer
cell lines.6 Narciclasine (4) exhibited the most potent activity with a mean
GI50 of 0.016 mM. Pancratistatin (2) exhibited a 5-fold decrease in activity
compared with narciclasine with a GI50 of 0.091 mM, while lycoricidine (3)
displayed a 10-fold decrease in activity with a GI50 of 0.15 mM (Table 1.1).
Interestingly, 7-deoxypancratistatin (1) also exhibited a drastic decrease in
activity with respect to pancratistatin (2), suggesting that the C-7 phenol is
important for the potency of these natural products. Furthermore, the fivefold
drop in activity due to the presence of an alcohol at the C-1 position (2 vs. 4)
indicates that hydrophilic functionality at that position is disfavored. Impor-
tantly, these cytotoxic properties were noticeably reduced in noncancerous
cells, making these molecules appealing as potential chemotherapeutics.7e9
In addition to their in vitro activity, both (þ)-pancratistatin (2) and
(þ)-narciclasine (4) have shown promising in vivo activity. Pancratistatin (2)
demonstrated significant in vivo activity against murine M-5076 ovarian sar-
coma and murine P-388 lymphocytic leukemia,5 as well as reducing the
growth of subcutaneous colon HT-29 tumors.10,11 Similarly, narciclasine (4)
displayed considerable in vivo activity against murine P-388 lymphocytic
leukemia as well as MC-38 murine colon carcinoma, and it reduced the growth
TABLE 1.1 In vitro activity of the Amaryllidaceae isocarbostyril alkaloids.a

Amaryllidaceae isocarbostyril alkaloids Chapter j 1


Mean Leukemia Pancreas Breast CNS Lung-NSC Colon Prostate
GI50 P388 BXPC-3 MCF-7 SF268 NCIeH460 KM20L2 Du-145
7-Deoxypancratistatin NT 1.420 NT NT NT NT 0.710 NT
(1)
Pancratistatin (2) 0.091 0.052 0.061 0.071 0.043 0.098 0.077 0.046
Lycoricidine (3) 0.150 0.065 0.240 0.160 0.410 0.180 0.290 0.170

Narciclasine (4) 0.016 0.042 0.011 0.010 0.010 0.027 0.011 0.011

NT, not tested.


a
IC50 and GI50 values reported in mM.

3
4 Strategies and Tactics in Organic Synthesis

of MX-1 breast carcinoma tumors,12 and invasive Hs683 and GL19 human
glioblastomas.13 Furthermore, narciclasine (4) inhibited mitosis in carcinoma,
glioma, and melanoma and was found to impair cancer cell migration.8 In
addition to their potent anticancer activity, 1e4 also showed significant anti-
viral activity against Japanese encephalitis, yellow fever, Rift Valley fever, and
dengue type 4 viruses,14 and narciclasine (4) has been found to attenuate diet-
induced obesity15 and possess antiinflammatory properties.16
Although these compounds have shown a myriad of promising activities,
their precise mode of action has yet to be uncovered. Studies suggest that
pancratistatin’s (2) anticancer activity proceeds through intrinsic apoptosis, as
evidenced by release of caspase-9 and caspase-3, exposure of phosphatidyl
serine, and destabilization of mitochondrial membrane potential.10,11,17
Interestingly, the cytotoxic activity of narciclasine (4) has been attributed to
extrinsic apoptosis as evidenced by the release of caspase-8 and the activation
of the Fas and death receptor 4 (DR4) or death-inducing signaling complex
(DISC).9 Yet, despite their structural homology, there have been no studies
directly comparing their mechanisms of action.9,18e22 Aside from its cytotoxic
activity, narciclasine has also displayed activity in various cytostatic pathways.
It has been shown to disrupt cytokinesis through two different pathways,
disruption of actin bundle formation through the binding of the translation
elongation factor eEF1A,25 and the formation of F-actin stress fibers through
the activation of GTPase RhoA.13 Additionally, narciclasine has been shown to
bind to the A-site of the 60S ribosome, thereby directly blocking peptide
synthesis.23,24 Notably, many of these promising activities of 4 have yet to be
shown for 2, thus necessitating further investigation and comparison of these
compounds and their structureeactivity relationships (SAR).
To fully elucidate their mechanism(s) of action and promote their pre-
clinical development, scalable access to isocarbostyrils 1e4 was needed.
Various isolation protocols for narciclasine (4) are reported in the literature,
mostly from the bulbs of the Narcissus plant, the yields of which can range
from 30 to 200 mg/kg depending on the species and time of year.19 When
harvested from the Hawaiian wilderness, Hymenocallis litoralis is the highest
yielding source of 2 (144 mg/kg) and 3 (222 mg/kg).5 However, when culti-
vated in fields and greenhouses in Arizona, the isolation yield dropped
significantly to 22 mg/kg for 2 and 15 mg/kg for 3 in the peak month of
October. This lack of availability has inhibited the investigations into their
bioactivities. Additionally, although the initial studies into these compounds
revealed their potential use as therapeutics, such as their notoriously low
aqueous solubility, there are drawbacks to overcome for these compounds to
become medicinally relevant.26
Owing to the lack of scalable access and the need for further biological
evaluations, as well as their structural complexity, 1e4 have attracted
considerable attention from the synthetic community. To date, there have been
11,27e38 13,30,39e50 14,27,38,51e62 and 843,57,62e67 syntheses of 1e4,
Amaryllidaceae isocarbostyril alkaloids Chapter j 1 5

respectively, as well as many formal, semi, epi-, and analog syntheses pub-
lished over the years.18e22 As such, there have been various strategies
developed for installing the correct stereocenters on the cyclitol core and
constructing the lactam ring. One notable approach, reported by the Hudlicky
group in 1992, involves the use of microbial arene oxidation to stereo-
selectively install the syn-diol present on the cyclitol core (Scheme 1.1),54
subjecting bromobenzene (5) to the bacterial dioxygenases of Pseudomonas
putida, followed by acetonide protection of the resulting diol-delivered diene
6. Subsequent stereoselective [4 þ 2] cycloaddition of diene 6 with an acyl
nitroso species provided bicycle 7a, which contains all the stereocenters
present in the cyclitol core of (þ)-lycoricidine (3). Reduction of the bromide
followed by cleavage of the NeO bond was accomplished with mercury
aluminum amalgam. Silyl protection followed by imide formation with
2-bromo-piperonyloyl chloride furnished key intermediate 9a. Closure of the
lactam was attempted with various methods including radical cyclization,
epoxide-opening, and the Pd-catalyzed Heck reaction. Ultimately, they found
that the modified Heck conditions, initially reported by Grigg and co-
workers,68 and optimized for a diastereomer of 9 by Chida and coworkers,53
were the only conditions that could provide the benzolactam. However, the
product was isolated as a mixture of fully protected, desilylated, and free
amide products. Fortunately, these could be isolated together and subjected to
global deprotection to furnish lycoricidine 3 in 9 steps and 25% yield overall.
Notably, 3 years later, Hudlicky was able to take advantage of this same
strategy of microbial arene oxidation for his synthesis of (þ)-pancratistatin.
Stereoselective aziridination followed by radical dehalogenation of diene 6
provided vinyl aziridine 7b. Installment of the necessary trans relationship
between the arene and amine then became possible by the nucleophilic ring
opening of the aziridine at the allylic position by cuprate 8b. Arylated inter-
mediate 9b was then further elaborated to yield (þ)-pancratistatin (1) in the
first asymmetric total synthesis in 14 steps and 2% overall yield. These
landmark total syntheses were the state-of-the-art before we started our work
on these molecules, and they demonstrated the power of dearomative pro-
cesses for the rapid introduction of complexity to feedstock petrochemical
starting materials.
Key steps in other notable approaches to this family of natural products are
shown in Fig. 1.2. In Trost’s 1995 synthesis of (þ)-pancratistatin, a desym-
metrization reaction was employed to define three existing stereocenters and
install a fourth in the product 12.41 In 1998, Magnus applied a beazidonation
strategy toward (þ)-pancratistatin, to yield allylic azide 14.42 Rigby reported
an interesting photocyclization approach in 2000.15 While the absolute ste-
reochemistry was dictated by the TBS protected alcohol in 15, the required
relative stereochemistry was imparted by the 6p-conrotatory photochemical
cyclization and subsequent suprafacial [1,5]-H shift to yield product 16. In
2009, Madsen utilized a Zn-mediated fragmentation to afford diene 19 that
6 Strategies and Tactics in Organic Synthesis
OH O
O Bu4NIO4 Br 1. PhI=NTs, O 8b
O AlH2(Hg) Br O Cu(acac)2 BF3·Et2O O O
CbzNHOH O
THF CH2Cl2 2. Bu3SnH, O 75% NHTs
O TsN O
91% O 74% O AIBN CONMe2
NHCbz N 42% OTBS
8a Cbz 7a 6 7b 9b

1. P. putida 39/D1 Cu(CN)Li2


1. ClSiMe2i-Pr, im. 85% 2. 2,2-DMP O
CH2Cl2 2 1. s-BuLi
pTsOH
76% 2. n O (Boc)2O 56%
CONMe2
then, 2-bromo- Br 2. Na/anthracene
piperonyloyl chloride OTBS
8b

OSiMe2iPr OH 5 OH
O
O OH HO OH
1. Pd(OAc)2 7 steps
Br TlOAc, DIPHOS O O
O O O O OH
2. Pd/C, EtOH OH NHBoc
NCbz cyclohexene NH NH O CONMe2
O O O
OH
O 23% O OH O
9a (+)-lycoricidine (3) (+)-pancratistatin (1) 10
9 steps 10% overall yield 14 steps 2% overall yield

SCHEME 1.1 Hudlicky’s dearomative approach to (þ)-lycoricidine (3) and (þ)-pancratistatin (2).
Trost - 1995 Magnus- 1998
OTIPS OTIPS
OCO2Me OCO2Me PhIO
(pC3H7PdCl)2 (0.5 mol%)
O O TMSN3
(R,R)-DACH-phenyl (0.75 mol%) Ar Ar
95%
O TMSN3 O N3
O
82% 13 Ar = 14
OCO2Me N3 O
11 12 OMe
Madsen - 2009
Rigby - 2000 O OMe
O O
TBSO hn TBSO I
OH
Zn
30% O TESO OBn
17 THF, O OBn
O NPMB O NPMB O Br H2O, MeOH O
O

Amaryllidaceae isocarbostyril alkaloids Chapter j 1


30%
O O O O O CO2Me
H 15 H 16 OBn O 19
18
OBn
OTBS OTBS OH
Yan - 2002 Keck - 1999 OH
O AcO O PhS O
O O
O O 1. SnCl4, CH2Cl2 O O O O O
O PhSH, hn
O NH 2. Ac2O, K2CO3 O NH O PhMe NOBn
O NOBn O
98% 90%
Et2N O Et2N O OMe O
20 21
O O 22 23

OMOM
Padwa - 2007 Banwell - 2007 OMOM
OH
MeO2C SnBu3 OH
O Br OMOM
16 MeO2C O
O IO O B NH2
27
CuCl/Pd(0) O O O OH
LiCl, DMSO 1. Pd(PPh3)4, K2CO3, mwave
O NPMB O NPMB O NH
O 2. BSBr O
82%
O O 30% over
24 25 MOMO OMe OH O ent-4
26 two steps

7
FIGURE 1.2 Selected approaches toward the Amaryllidaceae isocarbostyril alkaloids.
8 Strategies and Tactics in Organic Synthesis

allowed for a ring-closing metathesis reaction to close the cyclitol ring.46


Lewis acidemediated opening of epoxide 20, reported by Yan and coworkers
in 2002, closed the tetracyclic core of the natural product.58 While this step
furnished 21 in high yield, opening of the epoxide led to cis ring fusion,
making this strategy only useful for the synthesis of 3 and 4. In 1999, Keck and
coworkers reported a preparation of (þ)-lycoricidine (3) that used the 6-exo-
trig cyclization of a vinyl radical with an oxime ether, subjecting alkyne 22 to
thiophenol and visible light furnished lactam 23 in high yield as a single
diastereomer.56,57 Unfortunately, when this strategy was applied to the total
synthesis of narciclasine (4), the lactam cyclization did not proceed sponta-
neously and required stoichiometric amounts of Me3Al to mediate the cycli-
zation. A racemic synthesis of lycoricidine (3) was reported in 2007 by Padwa
and coworkers that employed an elegant one-pot Stille coupling/DielseAlder
sequence to form the lactam and install the necessary functional handles
needed for the cyclitol core.59 In 2007, Banwell and coworkers employed a
convergent approach, using an intermolecular Suzuki coupling to bring frag-
ment 26 and 27 together to furnish ent-4.67
One strategy for closing the lactam ring that has been used in various
syntheses of these natural products is the modified BischlereNapieralski re-
action, first reported by Banwell and coworkers in 1994 during their synthesis
of pancratistatin analogs (Scheme 1.2).61 These modified conditions utilize
Tf2O as a Lewis acid to promote the conversion of a carbamate (28) to either
an isocyanate (29) or nitrilium ion (30), which can then undergo a Frie-
deleCrafts reaction to close the lactam or dihydroisoquinoline, respectively,
with further hydrolysis yielding lactam 31. In 1999, Hudlicky and coworkers
were able to use this strategy to synthesize narciclasine precursor 31 in just
one step from methyl carbamate 28.64 While this endgame strategy has been
used by many syntheses to conveniently close the lactam ring in a single
transformation,29,42,44,49,64 it requires the cyclitol core to be fully protected to
proceed, thus necessitating additional manipulations.
Despite many elegant approaches, the development of a sustainable route
with practical access to these natural products has remained elusive, as none of
the previously reported syntheses have been able to produce more than
milligram quantities of these compounds in a single pass. Nevertheless, these
impressive synthetic endeavors enabled basic SAR studies that identified the
pharmacophore and provided more potent and selective analogs that could not
be accessed through direct modification of the natural products.18e22
While developing more potent molecules is often the goal of derivatization,
coincidental discovery of inactive compounds during this process can provide
much information about the significance of each structural motif on the
compound of interest. This is evidenced by compounds 3269 and 33,70 which
show the importance of the 1,3-benzodioxole moiety on the aromatic ring
(Fig. 1.3). Compounds 34e3671e73 suggest that not only is the amide, but also
its cyclic structure, important for activity. The inactivity of cyclitol derivatives
OAc OAc OAc OAc

Amaryllidaceae isocarbostyril alkaloids Chapter j 1


AcO OAc AcO OAc AcO OAc AcO OAc

O Tf2O O O HCl O
OAc OAc OAc OAc
O HN OR O N O N O NH
O
OPG O OPG OPG OPG O
OR
28
R=OMe, OEt, OtBu 29 or 30 31

SCHEME 1.2 The modified BischlereNapieralski reaction for lactam formation.

9
Arene derivatives Lactam derivatives

10 Strategies and Tactics in Organic Synthesis


OH OH OH OH OH
OH OH OH OH HO OH

TMS O O O
OH OH OH OH OH
NH NH O O O NH O OH
TMS
O O O O OMe
32 33 34 35 36
Banwell - 200770 Hudlicky - 200671 Chapleur - 200472 Chapleur - 199373 Kornienko - 200674
inactive inactive inactive inactive inactive
Cyclitol derivatives Cyclitol skeleton derivatives
OH OH OH OH
OH HO HO OH

O OH O O OH O OH
O NH O NH O NH O NHBz

O O O
37 38 39 40
McNulty - 200575 Banwell - 200770 Kornienko - 200976 McNulty - 200877
inactive inactive inactive inactive
More potent derivatives
OH OBz OH OH OH
OH OH BzHN OH OH

O O O O N
OH OH OH OH
O NH O NH O NH O NH

OH O OH O OH O OH O
41 42 43 44
(+)-transdihydronarciclasine6 Hudlicky - 201278 Marion - 200979 Hudlicky - 201580
IC50 = 3.2 nM (P-388) IC50 = 50 nM (HCT116) IC50 = 4.7 nM (HCT116) IC50 = 193.7 nM (HCC1954)

FIGURE 1.3 Selected analogs of the Amaryllidaceae isocarbostyril alkaloids.


Amaryllidaceae isocarbostyril alkaloids Chapter j 1 11

3774 and 3869 show the beneficial role of each of the alcohols on the core,
while structural derivates 3975 and 4076 showcase the need for the polyol to be
cyclic. Together, this information suggests that much of the core scaffold of
the natural product is necessary for the high activity. However, the increased
activity of (þ)-trans-dihydronarciclasine (41) (IC50 ¼ 3.2 nM in P388 leuke-
mia cells) over (þ)-pancratistatin (2) (IC50 ¼ 52 nM in P388 leukemia cells)
suggests that the C-1 hydroxyl in 1 is detrimental for its activity.6 This led
Hudlicky, and Marion, to synthesize analogs 4277 and 43,78 respectively, which
have increased activity when compared with 1e4. Since the C-1 position is
spatially close to the C-10 position, Hudlicky and coworkers wanted to explore
this region as well. This led to analog 44,79 which was slightly less active in
HCC1954 human T-cell leukemia cells (193.7 nM) when compared with its
natural counterpart, narciclasine (4) (173.2 nM). While this analog did not
show increased activity, this position has been understudied as no other ana-
logs of the C-10 position have been synthesized, and its proximity to the C-1
position suggests that hydrophobic groups may lead to increased activity.
Lastly, little effort has gone into derivatizing the C-7 position. As previously
stated, the presence of a free phenol at that position increases activity. Other
than protected phenols, few other analogs of this position have been produced
despite its importance in the activity of these compounds.18e22 All this in-
formation together points at three distinct positions of the pharmacophore that
are underexplored: C-1, C-7, and C-10 (Fig. 1.4). As most previously reported
strategies required a de novo synthesis to access each analog, and hampered
efficient SAR studies, the development of a more facile route toward these
natural products as well as a means of late-stage functionalization is highly
desirable. With this in mind, we set out to develop more concise and scalable
syntheses of these compounds that would also expedite the synthesis of
analogs.

Hydrophobic
Groups
C-10 C-1 OH
OH

O OH
O NH

O
C-7
Hydrophilic
Groups
FIGURE 1.4 Potential sites of diversification.
12 Strategies and Tactics in Organic Synthesis

2. Synthetic strategy
2.1 Retrosynthetic analysis
In our retrosynthetic analysis of the Amaryllidaceae isocarbostyril alkaloids,
we were aware that the greatest synthetic challenge resided in the densely
functionalized cyclitol core encompassing six and four contiguous stereocenters.
As discussed, several methods were already in place for the installation of the
benzolactam, i.e., the BischlerNapieralski reaction. Furthermore, in many of
the previous total syntheses, significant effort was required for the installation of
the requisite functionalities for the annulation, that led to a dramatic increase in
sequential operations (protection, lactam formation, and deprotection). Based on
these observations, we knew there were safer methods to install the lactam,
giving us the freedom to initially focus on the cyclitol core; particularly the
rapid and controlled formation of six contiguous stereocenters, enabling rapid
downstream installment of the lactam ring of the natural products (Scheme 1.3).
With this in mind, our first simplifying disconnect was lactam formation,
tracing back to aminocyclitol 45 and epoxy acetonide 46. We realized that
installation of the oxygen functionalities would be most straightforward at this
point, but we were not sure what selectivity would be inherent to the system to
install the correct relative stereochemistry and were resigned to an empirical
approach. By design, both disconnects revealed a convergent intermediate,
diene 47, which we designated as the key motif that would enable our syn-
thesis, that being: concise, scalable, and highly modular for the synthesis of
analogs. However, this meant that our total syntheses would rely on the
scalable preparation of diene 47. Additionally, while not of immediate priority,
but of overall importance, the asymmetric synthesis of these natural products
was crucial to allow us to test their biological activity, as the enantiomers were
shown to be inactive.69 Based on these requirements, we believed deriving this
product from benzene through a dearomative carboamination reaction would
be the most straightforward approach.

2.2 Development of the dearomative carboamination reaction


At the time of the project’s conception, our use and understanding of
MTAD-mediated (50) dearomative transformations was still in its infancy as
we were in the process of developing the dearomative dihydroxylation reaction
(Scheme 1.4).80 Yet, we hypothesized that an expansion of this methodology
would involve the use of transition metals in an allylic substitution-type
mechanism, similar to those employed by Lautens and others.81e84 The ura-
zole moiety could be considered a doubly allylic leaving group perfectly suited
for either of the two mechanisms shown, i.e., carbometalation followed by
b-elimination, or SN20 oxidative addition with subsequent transmetalation and
reductive elimination to furnish the requisite dearomative carboamination
product. However, we knew the development of this transformation would be
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