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The 22Q11.2 Deletion Syndrome in Zebrafish
The 22Q11.2 Deletion Syndrome in Zebrafish
The 22Q11.2 Deletion Syndrome in Zebrafish
2 deletion syndrome in
Zebrafish
22Q11.2 Deletion syndrome
(DiGeorge Syndrome)
• 6 mitochondrial genes:
• SLC25A1
• ZDHHC8
• TXNRD2
• PRODH
• TANGO2
• MRPL40
Function
Encodes mL40
Defects in this gene impair the
mitochondrial permeability transition pore
thus hindering it’s capacity to act as a Ca2+
buffer
Gene characteristics
MRPL40 Not duplicated
One splicing variation
Research Background
studies showed neurodevelopmental
abnormalities in C. elegans, fruit fly and
impaired WM in mice.
MRPL40 structure
EXON 1 EXON 2 EXON 4
EXON 3
UTR UTR
5762 bp
Normal splicing
200 aa
UTR UTR
883 bp
MRPL40 structure
EXON 1 EXON 2 EXON 4
EXON 3
UTR UTR
MO 5762 bp
MO induced splicing
UTR UTR
~805 bp
RT-PCR Primers
292 bp amplicon 612 bp amplicon
618 bp amplicon
MRPL40 cDNA
GATAACGGAAGTGTTTTTACACTGACCTACAGATCCACACTGGCCACTGAAAGGAGCAAAACATTTAATTTCTCACATTTTATGTTTGTAAAGTGGAT
ATTTCTGTAAATTATGGCGGGATTTGTGTGTCGTGCTGTAAACCGGATTATTTCGAGTCAATCCTCGTGTTGCAGTCCTGTTATTGCTGTCAGACACAG
AATCCTCGTGGTACGTATGTGACTT Intronic region
TCACTGGTTTACCTCAATGCTTTCGTTGAAAACTTCCGCACCATTAAGAGCCGAACCCAGGAAGAAGAAGAAGAAGGTGGACCCGCGGCAAGAAA
TTTTAGTGAAGGACCGACTGAAGAAGAGACTGAAAAGGATGGAGAAAGTCTCTCCAGAACTGATTCCCATTGAAGACTTCATAACTTCAGCCAAAA
GCTTCGACGACACCAGAACGCGTGCTCTTCCAGAAGTGTGTTTCGAGGAGAGCGAG
GCTTCGACGACACCAGAACGCGTGCTCTTCCAGAAGTGTGTTTCGAGGAGAGCGAGCGCAGAGCTCTGCTGCTGAAGGAATGGTCCAGACACAA
ACACAAACAGCACCAGATGGAGATGCAGGAGATCCAGGAGGCGCTGAAAGCCCAAAAGCAGGCGCTGATGCAGCTGAAACTGGAGTCTAAAGA
GCTTTACATTGCTGCGCTCCGTCCTGATACAGACACGCTGCCTTTCCTGCATCACGGGCCCAGTTACACTCCACCCATCGCTGACTATGAGGCTCCAG
AGGGAAAATATAATGACATTACACGTGTTTATACACAGTGAGGAGAGACGGTGACTGTATACAGGTGAAGAATAAAAATAATAAGTGTTCAATTAAG
AGGGAAAATATAATGACATTACACGTGTTTATACACAGTGAGGAGAGACGGTGAC
GTCTCGGAGAATAAAATGTATTGACGTCATTATATTGTTGTGAATTTATAATTATGTTGTTAAATCATCATGTTGTGATCGAGTTTAAAGGTTAAAATAAA
AAAATAAAAGAA
100 bp L 100 bp L
B B 55.5 56.5 57 58 59 60 61 62 63 64 B
Results
100 bp L
100 bp L 5% DMSO 10% DMSO
58 59
B PC
Results
qPCR Primers
100 bp amplicon 108 bp amplicon
124 bp amplicon
MRPL40 cDNA
GATAACGGAAGTGTTTTTACACTGACCTACAGATCCACACTGGCCACTGAAAGGAGCAAAACATTTAATTTCTCACATTTTATGTTTGTAAAGT
GGATATTTCTGTAAATTATGGCGGGATTTGTGTGTCGTGCTGTAAACCGGATTATTTCGAGTCAATCCTCGTGTTGCAGTCCTGTTATTGCTGTC
AGACACAGTCACTGGTTTACCTCAATGCTTTCGTTGAAAACTTCCGCACCATTAAGAGCCGAACCCAGGAAGAAGAAGAAGAAGGTGGACC
AGACACAGTCACTGGTTTACCTCAATGCTTTCGTTGAAAACTTCCGCACCAT
CGCGGCAAGAAATTTTAGTGAAGGACCGACTGAAGAAGAGACTGAAAAGGATGGAGAAAGTCTCTCCAGAACTGATTCCCATTGAAGACTT
CATAACTTCAGCCAAAAGCTTCGACGACACCAGAACGCGTGCTCTTCCAGAAGTGTGTTTCGAGGAGAGCGAGCGCAGAGCTCTGCTGCTG
CATAACTTCAGCCAAAAGCTTCGACGACACCAG
AAGGAATGGTCCAGACACAAACACAAACAGCACCAGATGGAGATGCAGGAGATCCAGGAGGCGCTGAAAGCCCAAAAGCAGGCGCTGAT
GCAGCTGAAACTGGAGTCTAAAGAGCTTTACATTGCTGCGCTCCGTCCTGATACAGACACGCTGCCTTTCCTGCATCACGGGCCCAGTTACAC
TCCACCCATCGCTGACTATGAGGCTCCAGAGGGAAAATATAATGACATTACACGTGTTTATACACAGTGAGGAGAGACGGTGACTGTATACAG
TCCACCCATCGCTGACTATGAGGCTCCAGAGGGAAAATATAATGACATTACACGTGTTTATACACAGTGAGGAGAGACGGTGACTGTAT
GTGAAGAATAAAAATAATAAGTGTTCAATTAAGGTCTCGGAGAATAAAATGTATTGACGTCATTATATTGTTGTGAATTTATAATTATGTTGTTAA
ATCATCATGTTGTGATCGAGTTTAAAGGTTAAAATAAAAAAATAAAAGAA
100 bp L
B PC
Results
Sample size for
Morpholino
injections
NIC
3 ng/ul
Injection 6 ng/ul
Design
9 ng/ul
Control 9 ng/ul
Head size
Eye size
Potential
Readouts
Hearth development
Synaptogenesis