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LM Lipid Chemistry and Classification
LM Lipid Chemistry and Classification
LM Lipid Chemistry and Classification
Glycerolipids (GL)
Glycerophospholipids (GP)
Sphingolipids (SP)
E.Fahy 2010 ©
LIPID MAPS Website
http://www.lipidmaps.org/
Definition of a lipid*
* Fahy,E. et al, Journal of Lipid Research, Vol. 46, 839-862, May 2005
E. Fahy 2010 ©
Lipid classification: biosynthetic routes
1: Carbanion-based condensation
CATEGORIES
Fatty Acyls
Glycerolipids
Glycerophospholipids
Sphingolipids
Saccharolipids
Polyketides
E. Fahy 2010 ©
Lipid classification: biosynthetic routes
2: Carbocation-based condensation
CATEGORIES
Sterol lipids
Prenol lipids
E. Fahy 2010 ©
J. Lipid Res. Classification publications
Journal of Lipid Research, Vol. 46, 839-862, May 2005
Journal of Lipid Research, 50th anniversary edition, May 2009
E. Fahy 2010 ©
LIPID MAPS Classification System
Categories and Examples
Category Abbreviation Example
Glycerolipids GL 1-hexadecanoyl-2-(9Z-octadecenoyl)-sn-
glycerol
Glycerophospholipids GP 1-hexadecanoyl-2-(9Z-octadecenoyl)-sn-
glycero-3-phosphocholine
Sphingolipids SP N-(tetradecanoyl)-sphing-4-enine
Saccharolipids SL UDP-3-O-(3R-hydroxy-tetradecanoyl)-aD-
N-acetylglucosamine
Polyketides PK Aflatoxin B1
E. Fahy 2010 ©
LIPID MAPS: Compound ID
• LIPID MAPS compound ID
– LMGP01010005
1-hexadecanoyl-2-(9Z-octadecenoyl)-sn-glycero-3-phosphocholine
• Database identifier
– Digits 1-2: Database: LM (LIPID MAPS)
– Digits 3-4: Category: GP (Glycerophospholipids)
– Digits 5-6: Class: 01 (Glycerophosphocholines)
– Digits 7-8: Subclass: 01 (Diacylglycerophosphocholines)
– Digits 9-?: Optional additional class levels (typically not required)
– Last 4 digits: Unique identifier within subclass: 0005
E. Fahy 2010 ©
Consistent structure representation across classes
Fatty Acyls(FA)
Glycerolipids (GL)
Glycerophospholipids (GP)
Sphingolipids (SP)
7000
6000
Total: 22,500
5000
4000
3000
2000
1000
0
FA GL GP SP ST PR SL PK
E. Fahy 2010 ©
Populating LIPID MAPS structure database
New structures
identified by LIPID MAPS
experiments
LIPID
Computationally
generated structures
MAPS
structure
database
Public databases
Websites,
22,500 structures
Publications as of 10/21/10
E. Fahy 2010 ©
LIPID MAPS Structure Database (LMSD)
http://www.lipidmaps.org/data/structure/
Online features:
Browse
Text search
Substructure search
Download structures E. Fahy 2010 ©
Querying Lipidomics Gateway website as well as
LIPID MAPS databases via “Quick search”
Small “footprint”
High visibility (on home page)
Multi-purpose
E. Fahy 2010 ©
Quick search query types Example
LIPID MAPS LM_ID LMFA03010003
Keywords on Lipidomics
Gateway website pages “Atherosclerosis”, “Dennis”, “homeostasis”
(personnel, publications, news,
updates, etc.)
E. Fahy 2010 ©
Use InChIKey to find structures differing only in stereochemistry,
double-bond geometry or isotopic labeling
E. Fahy 2010 ©
Use InChIKey (full or partial) to perform a Google structure search
European Bioinformatics
Inst.
LIPID MAPS
PubChem
E. Fahy 2010 ©
Quick search summary report
Database hits
(lipid,gene,standards db’s
Classification system)
E. Fahy 2010 ©
Online lipid structure-drawing tools
http://www.lipidmaps.org/tools/index.html
E. Fahy 2010 ©
Online generation of glycan structures in full chair conformation
http://www.lipidmaps.org/tools/index.html
Sugars
Glc
Gal
GlcNAc
GalNac
Xyl
Fuc
Man
NeuAc
NeuGc
KDN
Anomeric Carbon
a or b linkages may
be specified
E. Fahy 2010 ©
Lipid Proteome Database (LMPD)
E. Fahy 2010 ©
Search LMSD with ontology terms
E. Fahy 2010 ©
LIPID BIOSYNTHETIC NETWORKS
FATTY ACIDS
EICOSANOIDS STEROLS
Acetyl CoA
PRENOLS
E. Fahy 2010 ©
Acknowledgement
Eoin Fahy
September, 2010
U.C. San Diego
E. Fahy 2010 ©
Appendix: Lipid Classification System
E. Fahy 2010 ©
Lipid Classification
Category
Main class
Subclass
Level 4 class
E. Fahy 2010 ©
Lipid Classification
Categories and Examples
Category Abbrev Example
Glycerolipids GL 1-hexadecanoyl-2-(9Z-octadecenoyl)-sn-
glycerol
Glycerophospholipids GP 1-hexadecanoyl-2-(9Z-octadecenoyl)-sn-
glycero-3-phosphocholine
Sphingolipids SP N-(tetradecanoyl)-sphing-4-enine
E. Fahy 2010 ©
Lipid Classification
Category
Main class
Subclass
Level 4 class
E. Fahy 2010 ©
1: Fatty Acyls [FA] Main classes
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=1
E. Fahy 2010 ©
2: Glycerolipids [GL] Main classes
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=2
E. Fahy 2010 ©
3: Glycerophospholipids [GP] Main classes
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=3
[+] Glycerophosphocholines [GP01]
[+] Glycerophosphoethanolamines [GP02]
[+] Glycerophosphoserines [GP03]
[+] Glycerophosphoglycerols [GP04]
[+] Glycerophosphoglycerophosphates [GP05]
[+] Glycerophosphoinositols [GP06]
[+] Glycerophosphoinositol monophosphates [GP07]
[+] Glycerophosphoinositol bisphosphates [GP08]
[+] Glycerophosphoinositol trisphosphates [GP09]
[+] Glycerophosphates [GP10]
[+] Glyceropyrophosphates [GP11]
[+] Glycerophosphoglycerophosphoglycerols [GP12]
[+] CDP-Glycerols [GP13]
[+] Glycosylglycerophospholipids [GP14]
[+] Glycerophosphoinositolglycans [GP15]
[+] Glycerophosphonocholines [GP16]
[+] Glycerophosphonoethanolamines [GP17]
Di-glycerol tetraether phospholipids (caldarchaeols) [GP18]
Glycerol-nonitol tetraether phospholipids [GP19]
Oxidized glycerophospholipids [GP20]
Other Glycerophospholipids [GP00]
E. Fahy 2010 ©
4: Sphingolipids [SP] Main classes
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=4
E. Fahy 2010 ©
5: Sterol Lipids [ST] Main classes
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=5
E. Fahy 2010 ©
6: Prenol Lipids [PR] Main classes
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=6
E. Fahy 2010 ©
7: Saccharolipids [SL] Main classes
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=7
E. Fahy 2010 ©
8: Polyketides [PK] Main classes
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=8
E. Fahy 2010 ©
Lipid Classification
Category
Main class
Subclass
Level 4 class
E. Fahy 2010 ©
1: Fatty Acyls [FA] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=1
E. Fahy 2010 ©
1: Fatty Acyls [FA] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=1
Octadecanoids [FA02]
12-oxophytodienoic acid metabolites [FA0201]
jasmonic acids [FA0202]
Eicosanoids [FA03]
Prostaglandins [FA0301]
Leukotrienes [FA0302]
Thromboxanes [FA0303]
Lipoxins [FA0304]
Hydroxy/hydroperoxyeicosatrienoic acids [FA0305]
Hydroxy/hydroperoxyeicosatetraenoic acids [FA0306]
Hydroxy/hydroperoxyeicosapentaenoic acids [FA0307]
Epoxyeicosatrienoic acids [FA0308]
Hepoxilins [FA0309]
Levuglandins [FA0310]
Isoprostanes [FA0311]
Clavulones and derivatives [FA0312]
Other [FA0300]
Docosanoids [FA04]
E. Fahy 2010 ©
1: Fatty Acyls [FA] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=1
E. Fahy 2010 ©
1: Fatty Acyls [FA] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=1
E. Fahy 2010 ©
2: Glycerolipids [GL] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=2
Monoradylglycerols [GL01]
Monoacylglycerols [GL0101]
Monoalkylglycerols [GL0102]
Mono-(1Z-alkenyl)-glycerols [GL0103]
Monoacylglycerolglycosides [GL0104]
Monoalkylglycerolglycosides [GL0105]
Diradylglycerols [GL02]
Diacylglycerols [GL0201]
1-alkyl,2-acylglycerols [GL0202]
1-acyl,2-alkylglycerols [GL0207]
Dialkylglycerols [GL0203]
1Z-alkenylacylglycerols [GL0204]
Di-glycerol tetraethers [GL0205]
Di-glycerol tetraether glycans [GL0206]
E. Fahy 2010 ©
2: Glycerolipids [GL] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=2
Triradylglycerols [GL03]
Triacylglycerols [GL0301]
Alkyldiacylglycerols [GL0302]
Dialkylmonoacylglycerols [GL0303]
1Z-alkenyldiacylglycerols [GL0304]
Estolides [GL0305]
Glycosylmonoradylglycerols [GL04]
Glycosylmonoacylglycerols [GL0401]
Glycosylmonoalkylglycerols [GL0402]
Glycosyldiradylglycerols [GL05]
Glycosyldiacylglycerols [GL0501]
Glycosylalkylacylglycerols [GL0502]
Glycosyldialkylglycerols [GL0503]
Glycerophosphocholines [GP01]
Diacylglycerophosphocholines [GP0101]
1-alkyl,2-acylglycerophosphocholines [GP0102]
1-acyl,2-alkylglycerophosphocholines [GP0108]
1Z-alkenyl,2-acylglycerophosphocholines [GP0103]
Dialkylglycerophosphocholines [GP0104]
Monoacylglycerophosphocholines [GP0105]
Monoalkyl glycerophosphocholines [GP0106]
1Z-alkenylglycerophosphocholines [GP0107]
Glycerophosphoethanolamines [GP02]
Diacylglycerophosphoethanolamines [GP0201]
1-alkyl,2-acylglycerophosphoethanolamines [GP0202]
1-acyl,2-alkylglycerophosphoethanolamines [GP0208]
1Z-alkenyl,2-acylglycerophosphoethanolamines [GP0203]
Dialkylglycerophosphoethanolamines [GP0204]
Monoacylglycerophosphoethanolamines [GP0205]
Monoalkyl glycerophosphoethanolamines [GP0206]
1Z-alkenylglycerophosphoethanolamines [GP0207]
E. Fahy 2010 ©
3: Glycerophospholipids [GP] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=3
Glycerophosphoserines [GP03]
Diacylglycerophosphoserines [GP0301]
1-alkyl,2-acylglycerophosphoserines [GP0302]
1Z-alkenyl,2-acylglycerophosphoserines [GP0303]
Dialkylglycerophosphoserines [GP0304]
Monoacylglycerophosphoserines [GP0305]
Monoalkyl glycerophosphoserines [GP0306]
1Z-alkenylglycerophosphoserines [GP0307]
Glycerophosphoglycerols [GP04]
Diacylglycerophosphoglycerols [GP0401]
1-alkyl,2-acylglycerophosphoglycerols [GP0402]
1Z-alkenyl,2-acylglycerophosphoglycerols [GP0403]
Dialkylglycerophosphoglycerols [GP0404]
Monoacylglycerophosphoglycerols [GP0405]
Monoalkyl glycerophosphoglycerols [GP0406]
1Z-alkenylglycerophosphoglycerols [GP0407]
Diacylglycerophosphodiradylglycerols [GP0408]
Diacylglycerophosphomonoradylglycerols [GP0409]
Monoacylglycerophosphomonoradylglycerols [GP0410]
E. Fahy 2010 ©
3: Glycerophospholipids [GP] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=3
Glycerophosphoglycerophosphates [GP05]
Diacylglycerophosphoglycerophosphates [GP0501]
1-alkyl,2-acylglycerophosphoglycerophosphates [GP0502]
1Z-alkenyl,2-acylglycerophosphoglycerophosphates [GP0503]
Dialkylglycerophosphoglycerophosphates [GP0504]
Monoacylglycerophosphoglycerophosphates [GP0505]
Monoalkyl glycerophosphoglycerophosphates [GP0506]
1Z-alkenylglycerophosphoglycerophosphates [GP0507]
Glycerophosphoinositols [GP06]
Diacylglycerophosphoinositols [GP0601]
1-alkyl,2-acylglycerophosphoinositols [GP0602]
1Z-alkenyl,2-acylglycerophosphoinositols [GP0603]
Dialkylglycerophosphoinositols [GP0604]
Monoacylglycerophosphoinositols [GP0605]
Monoalkyl glycerophosphoinositols [GP0606]
1Z-alkenylglycerophosphoinositols [GP0607]
E. Fahy 2010 ©
3: Glycerophospholipids [GP] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=3
E. Fahy 2010 ©
3: Glycerophospholipids [GP] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=3
E. Fahy 2010 ©
3: Glycerophospholipids [GP] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=3
E. Fahy 2010 ©
3: Glycerophospholipids [GP] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=3
CDP-Glycerols [GP13]
CDP-diacylglycerols [GP1301]
CDP-1-alkyl,2-acylglycerols [GP1302]
CDP-1Z-alkenyl,2-acylglycerols [GP1303]
CDP-Dialkylglycerols [GP1304]
CDP-Monoacylglycerols [GP1305]
CDP-Monoalkyl glycerols [GP1306]
CDP-1Z-alkenylglycerols [GP1307]
E. Fahy 2010 ©
3: Glycerophospholipids [GP] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=3
Glycosylglycerophospholipids [GP14]
Diacylglycosylglycerophospholipids [GP1401]
1-alkyl,2-acylglycosylglycerophospholipids [GP1402]
1Z-alkenyl,2-acylglycosylglycerophospholipids [GP1403]
Dialkylglycosylglycerophospholipids [GP1407]
Monoacylglycosylglycerophospholipids [GP1404]
Monoalkylglycosylglycerophospholipids [GP1405]
1Z-alkenylglycosylglycerophospholipids [GP1406]
Glycerophosphoinositolglycans [GP15]
Diacylglycerophosphoinositolglycans [GP1501]
1-alkyl,2-acylglycerophosphoinositolglycans [GP1502]
1Z-alkenyl,2-acylglycerophosphoinositolglycans [GP1503]
Monoacylglycerophosphoinositolglycans [GP1504]
Monoalkylglycerophosphoinositolglycans [GP1505]
1Z-alkenylglycerophosphoinositolglycans [GP1506]
E. Fahy 2010 ©
3: Glycerophospholipids [GP] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=3
Glycerophosphonocholines [GP16]
Diacylglycerophosphonocholines [GP1601]
1-alkyl,2-acylglycerophosphonocholines [GP1602]
1Z-alkenyl,2-acylglycerophosphonocholines [GP1603]
Dialkylglycerophosphonocholines [GP1604]
Monoacylglycerophosphonocholines [GP1605]
Monoalkyl glycerophosphonocholines [GP1606]
1Z-alkenylglycerophosphonocholines [GP1607]
Glycerophosphonoethanolamines [GP17]
Diacylglycerophosphonoethanolamines [GP1701]
1-alkyl,2-acylglycerophosphonoethanolamines [GP1702]
1Z-alkenyl,2-acylglycerophosphonoethanolamines [GP1703]
Dialkylglycerophosphonoethanolamines [GP1704]
Monoacylglycerophosphonoethanolamines [GP1705]
Monoalkyl glycerophosphonoethanolamines [GP1706]
1Z-alkenylglycerophosphonoethanolamines [GP1707]
Di-glycerol tetraether phospholipids (caldarchaeols) [GP18]
Glycerol-nonitol tetraether phospholipids [GP19]
Oxidized glycerophospholipids [GP20]
Other glycerophospholipids[GP00]
E. Fahy 2010 ©
4: Sphingolipids [SP] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=4
Sphingoid bases [SP01]
Sphing-4-enines (Sphingosines) [SP0101]
Sphinganines [SP0102]
4-Hydroxysphinganines (Phytosphingosines) [SP0103]
Sphingoid base homologs and variants [SP0104]
Sphingoid base 1-phosphates [SP0105]
Lysosphingomyelins and lysoglycosphingolipids [SP0106]
N-methylated sphingoid bases [SP0107]
Sphingoid base analogs [SP0108]
Ceramides [SP02]
N-acylsphingosines (ceramides) [SP0201]
N-acylsphinganines (dihydroceramides) [SP0202]
N-acyl-4-hydroxysphinganines (phytoceramides) [SP0203]
Acylceramides [SP0204]
Ceramide 1-phosphates [SP0205]
Phosphosphingolipids [SP03]
Ceramide phosphocholines (sphingomyelins) [SP0301]
Ceramide phosphoethanolamines [SP0302]
Ceramide phosphoinositols [SP0303]
Phosphonosphingolipids [SP04]
E. Fahy 2010 ©
4: Sphingolipids [SP] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=4
Neutral glycosphingolipids [SP05]
Simple Glc series (GlcCer, LacCer, etc) [SP0501]
GalNAcb1-3Gala1-4Galb1-4Glc- (Globo series) [SP0502]
GalNAcb1-4Galb1-4Glc- (Ganglio series) [SP0503]
Galb1-3GlcNAcb1-3Galb1-4Glc- (Lacto series) [SP0504]
Galb1-4GlcNAcb1-3Galb1-4Glc- (Neolacto series) [SP0505]
GalNAcb1-3Gala1-3Galb1-4Glc- (Isoglobo series) [SP0506]
GlcNAcb1-2Mana1-3Manb1-4Glc- (Mollu series) [SP0507]
GalNAcb1-4GlcNAcb1-3Manb1-4Glc- (Arthro series) [SP0508]
Gal- (Gala series) [SP0509]
Other [SP0510]
Acidic glycosphingolipids [SP06]
Gangliosides [SP0601]
Sulfoglycosphingolipids (sulfatides) [SP0602]
Glucuronosphingolipids [SP0603]
Phosphoglycosphingolipids [SP0604]
Other [SP0600]
Basic glycosphingolipids [SP07]
Amphoteric glycosphingolipids [SP08]
Arsenosphingolipids [SP09]
Other Sphingolipids [SP00] E. Fahy 2010 ©
5: Sterol Lipids [ST] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=5
Sterols [ST01]
Cholesterol and derivatives [ST0101]
Cholesteryl esters [ST0102]
Ergosterols and C24-methyl derivatives [ST0103]
Stigmasterols and C24-ethyl derivatives [ST0104]
C24-propyl sterols and derivatives [ST0105]
Gorgosterols and derivatives [ST0106]
Furostanols and derivatives [ST0107]
Spirostanols and derivatives [ST0108]
Furospirostanols and derivatives [ST0109]
Cycloartanols and derivatives [ST0110]
Calysterols and derivatives [ST0111]
Cardanolides and derivatives [ST0112]
Bufanolides and derivatives [ST0113]
Brassinolides and derivatives [ST0114]
Solanidines and alkaloid derivatives [ST0115]
E. Fahy 2010 ©
5: Sterol Lipids [ST] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=5
Steroids [ST02]
C18 steroids (estrogens) and derivatives [ST0201]
C19 steroids (androgens) and derivatives [ST0202]
C21 steroids (gluco/mineralocorticoids, progestogins) and derivatives [ST0203]
Secosteroids [ST03]
Vitamin D2 and derivatives [ST0301]
Vitamin D3 and derivatives [ST0302]
Vitamin D4 and derivatives [ST0303]
Vitamin D5 and derivatives [ST0304]
Vitamin D6 and derivatives [ST0305]
Vitamin D7 and derivatives [ST0306]
E. Fahy 2010 ©
5: Sterol Lipids [ST] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=5
Bile acids and derivatives [ST04]
C22 bile acids, alcohols, and derivatives [ST0405]
C23 bile acids, alcohols, and derivatives [ST0406]
C24 bile acids, alcohols, and derivatives [ST0401]
C25 bile acids, alcohols, and derivatives [ST0407]
C26 bile acids, alcohols, and derivatives [ST0402]
C27 bile acids, alcohols, and derivatives [ST0403]
C28 bile acids, alcohols, and derivatives [ST0404]
C29 bile acids, alcohols, and derivatives [ST0408]
Steroid conjugates [ST05]
Glucuronides [ST0501]
Sulfates [ST0502]
Glycine conjugates [ST0503]
Taurine conjugates [ST0504]
Other Sterol lipids [ST00]
E. Fahy 2010 ©
6: Prenol Lipids [PR] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=6
Isoprenoids [PR01]
C5 isoprenoids [PR0101]
[+] C10 isoprenoids (monoterpenes) [PR0102]
[+] C15 isoprenoids (sesquiterpenes) [PR0103]
[+] C20 isoprenoids (diterpenes) [PR0104]
[+] C25 isoprenoids (sesterterpenes) [PR0105]
[+] C30 isoprenoids (triterpenes) [PR0106]
C40 isoprenoids (tetraterpenes) [PR0107]
Polyterpenes [PR0108]
Retinoids [PR0109]
Quinones and hydroquinones [PR02]
Ubiquinones [PR0201]
Vitamin E [PR0202]
Vitamin K [PR0203]
E. Fahy 2010 ©
6: Prenol Lipids [PR] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=6
Polyprenols [PR03]
Bactoprenols [PR0301]
Bactoprenol monophosphates [PR0302]
Bactoprenol diphosphates [PR0303]
Phytoprenols [PR0304]
Phytoprenol monophosphates [PR0305]
Phytoprenol diphosphates [PR0306]
Dolichols [PR0307]
Dolichol monophosphates [PR0308]
Dolichol diphosphates [PR0309]
Hopanoids [PR04]
Other Prenol lipids [PR00]
E. Fahy 2010 ©
7: Saccharolipids [SL] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=7
Acylaminosugars [SL01]
Monoacylaminosugars [SL0101]
Diacylaminosugars [SL0102]
Triacylaminosugars [SL0103]
Tetraacylaminosugars [SL0104]
Pentaacylaminosugars [SL0105]
Hexaacylaminosugars [SL0106]
Heptaacylaminosugars [SL0107]
Acylaminosugar glycans [SL02]
Acyltrehaloses [SL03]
Acyltrehalose glycans [SL04]
Other [SL00]
E. Fahy 2010 ©
8: Polyketides [PK] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=8
E. Fahy 2010 ©
8: Polyketides [PK] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=8
Flavonoids [PK12]
Anthocyanidins [PK1201]
Flavans, Flavanols and Leucoanthocyanidins [PK1202]
Proanthocyanidins [PK1203]
Biflavonoids and polyflavonoids [PK1204]
Isoflavonoids [PK1205]
Rotenoid flavonoids [PK1206]
Pterocarpans [PK1207]
Isoflavans [PK1208]
Coumestan flavonoids [PK1209]
Neoflavonoids [PK1210]
Flavones and Flavonols [PK1211]
Chalcones and dihydrochalcones [PK1212]
Aurone flavonoids [PK1213]
Flavanones [PK1214]
Dihydroflavonols [PK1215]
Other Flavonoids [PK1216]
E. Fahy 2010 ©
8: Polyketides [PK] Subclasses
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=8
E. Fahy 2010 ©
Lipid Classification
Category
Main class
Subclass
Level 4 class
E. Fahy 2010 ©
6: Prenol Lipids [PR] Level 4 classes
http://www.lipidmaps.org/data/classification/LM_classification_exp.php?category=6
Isoprenoids [PR01]
[+] C10 isoprenoids (monoterpenes) [PR0102]
Acyclic monoterpenoids [PR010201]
Irregular acyclic monoterpenoids [PR010202]
12 others…….
[+] C15 isoprenoids (sesquiterpenes) [PR0103]
Acyclic farnesane sesquiterpenoids [PR010301]
Furanoid farnesane sesquiterpenoids [PR010302]
87 others…….
[+] C20 isoprenoids (diterpenes) [PR0104]
Acyclic diterpenoids [PR010401]
Prenylbisabolane and cyclophytane diterpenoids [PR010402]
53 others…….
[+] C25 isoprenoids (sesterterpenes) [PR0105]
Acyclic sesterterpenoids [PR010501]
Cyclohexane sesterterpenoids [PR010502]
5 others…….
[+] C30 isoprenoids (triterpenes) [PR0106]
Acyclic triterpenoids [PR010601]
Cyclohexane triterpenoids [PR010602]
23 others…….
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