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Gut Dysbiosis and Its Effect On Gut Microbiodata-Derived Metabolites
Gut Dysbiosis and Its Effect On Gut Microbiodata-Derived Metabolites
Sanofi India LTD., CTS No.117-B, L&T Business Park, Saki Vihar Rd, Powai, Mumbai, Maharashtra 400072, India
Dr Joura Vishal
MD (PGI ) MRCP ( UK )
Senior Consultant Internal Medicine
MAT-IN-2301411-v1.0/06/2023 SGL Superspecailaity Hospital
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Table of Contents
Key Points
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Gut Dysbiosis
community
Loss of Dominance/
Inflammation
Relationship between the gut beneficial overgrowth of
and pathology
microbiota, metabolic products organisms commensals
and the host is lost in a
microbial ecosystem.
Gut dysbiosis involves loss of beneficial microorganisms and leads to expansion of pathogenic microbes,
triggers pro-inflammatory effects and immune dysregulation associated with various disease states.
References:
Iebba V, Totino V, Gagliardi A, Santangelo F, Cacciotti F, Trancassini M, Mancini C, Cicerone C, Corazziari E, Pantanella F, Schippa S. Eubiosis and dysbiosis: the two sides of the microbiota. New Microbiol. 2016 Jan;39(1):1-12
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Most disease
stems in the digestive
tract due to dysbiosis
- when the
“good”
bacteria are no
longer able to control
the “bad” ones1
References:
1. Iebba V, Totino V, Gagliardi A, Santangelo F, Cacciotti F, Trancassini M, Mancini C, Cicerone C, Corazziari E, Pantanella F, Schippa S. Eubiosis and dysbiosis: the two sides of the microbiota. New Microbiol. 2016 Jan;39(1):1-12.
2. Gebrayel P et al Microbiota medicine: towards clinical revolution. J Transl Med. 2022 Mar 7;20(1):111. doi: 10.1186/s12967-022-03296-9. PMID: 35255932; PMCID: PMC8900094.
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G
u
Healthy t Altered
m
i
Microbial metabolites
c
r of human metabolism
Regulation
o
b Detrimental effect of altered specific
Health- Disease-
i promoting microbiota-derived metabolites leads to
promoting o imbalanced symbiotic gut microbiota.
m
References: e
Herrema H, Jan N. Intestinal microbial metabolites in human metabolism and type 2 diabetes. Diabetologia.2020;63:2533–47. Available at: https://link.springer.com/article/10.1007/s00125-020-05268-4
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TMAO Locally act on intestinal epithelium and immune cells to further induce
Primary Bile Gut Microbiota downstream systemic functions.2
Acids
+ B
Secondary
Bile Acids
Systemically can be absorbed and transported to remote organs
Gut Microbiota C and tissues to exert diverse functions.2
BCAAs
Polyamines
Bacterial Vitamins Indirectly regulates composition and function of gut microbiota via inducing
hosts to synthesize and release anti-bacterial materials into gut lumen.2
(A) Gut microbiota from dietary components Gut microbiota-derived metabolites play a critical role in maintaining the composition
(B) Host and modified by gut bacteria and function of the gut microbiota and its alteration can cause multiple immune-related
(C) Synthesized de novo by gut bacteria inflammatory diseases.1,2
References:
1. Yang W, Cong Y. Gut microbiota-derived metabolites in the regulation of host immune responses and immune-related inflammatory diseases. Cell Mol Immunol. 2021 Apr;18(4):866-877.
2. Liu J et al. Functions of Gut Microbiota Metabolites, Current Status and Future Perspectives. Aging and disease. 2022
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Cholate, hyocholate,
Facilitate lipid and vitamin absorption;
deoxycholate, Primary biliary cholangitis, primary
regulation of gut microbiota composition,
taurohyocholate, sclerosing cholangitis, ulcerative
Bile acids gut hormones, intestinal immunity,
ursodeoxycholate, colitis, cancer, hepatic
intestinal electrolyte and fluid balance,
taurocholate, tauro- a- encephalopathy,
gut motility,
muricholate
T1D T2D RA
T2D RA
RA
SLE
Specific microbiota-derived metabolites, notably SCFAs, bile acids, BCAAs and TMAO have been implicated
in pathogenesis of immune-related inflammatory diseases and metabolic disorders.
References:
Yang W, Cong Y. Gut microbiota-derived metabolites in the regulation of host immune responses and immune-related inflammatory diseases. Cell Mol Immunol. 2021 Apr;18(4):866-877.
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BCAAs
Increases cardiovascular risks by inducing
↑ Hyperlipidaemia
↑ Oxidative stress hyperlipidaemia, oxidative stress and pro-
TM AO
↑ Pro-inflammatory cytokines
inflammatory cytokines
Specific microbiota-derived metabolites, notably SCFAs, bile acids, BCAAs and TMAO
have been implicated in pathogenesis of metabolic disorders.
References:
Agus A, Clément K, Sokol H. Gut microbiota-derived metabolites as central regulators in metabolic disorders. Gut. 2021 Jun;70(6):1174-82.
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Gut permeability
AMPK activity
Increases LPS activity, Production
Leads to a decrease in fatty
of pro-inflammatory cytokines acid oxidation and an increase
and stimulates adipogenesis
in adipogenesis.
through activation of peripheral
endocannabinoid system.
Altered microbiota-derived metabolites, mainly SCFA and dysregulated bile acid metabolism are associated
with metabolic diseases including obesity.
Abbreviations:FIAF: Fasting-induced adipocyte factor; LPL: Lipoprotein lipase; LPS: Lipopolysaccharides.
Sanchez M, Panahi S, Tremblay A. Childhood obesity: a role for gut microbiota? Int J Environ Res Public Health. 2014 Dec;12(1):162-75.
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Cholesterol
accumulation
Hypertension
Foam cell
formation
Atherosclerosis
Platelet
hyper-responsiveness CVD
Atherosclerosis
Vascular endothelial
inflammation
TMA Heart failure
Fibrosis and
remodelling
TMAO
FMOs
Actinobacteria SCFAs
Bacteroidetes The microbes and immune cells
Proteobacteria
mediate the cross talk between
Tuberculosis the gut microbiota and lungs
Enterococcus sp.
IL-12
SCFAs
Akkermansia muciniphila Actinobacteria sp.
Bifidobacterium sp.
Faecalibacterium prausnitzii Alteration in the composition of gut
microbiome may lead to immune
responses and disease development
in the lungs
References:
Zhou A, Lei Y, Tang L, et al.. Gut Microbiota: the Emerging Link to Lung Homeostasis and Disease. J Bacteriol. 2021 Jan 25;203(4):e00454-20.
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Compelling evidence have postulated that even antibiotics treatments shape the gut microenvironment and
influence microbiota-derived metabolites.
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Lesser compliance
Poor immune response
to antibiotic therapy
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Impact of
Antibiotic Associated Dysbiosis
References:
Lebba V et al. Eubiosis and dysbiosis: the two sides of the microbiota. New Microbiol. 2016 Jan;39(1):1-12.
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Significance of probiotics
Probiotics plays an important role in maintaining normal
PROBIOTICS microbial composition, metabolism and immunity of gut.
Immunomodulation: Enhances systemic immunity and
Immunomodulation Normalized gut
Metabolic
reduces the chances of allergy and inflammation.
microbiota composition
effects
Restoration of normal gut microbiota composition:
Decreased allergic Improved mucosal
Vitamin synthesis Strengthens mucosal immunity and decreases gut
reactions immunity
infections and disorders.
Decreased gut
Reduced Lower
disorders
inflammation cholesterol Normal metabolic effects: Helps in vitamin K synthesis,
Decreased gut Improved lactose
Strengthened Immunity
infections tolerance metabolism of lactose and lowers cholesterol level.
Importance of gut probiotics in human All these functons of probiotics are correlated to each other.
health
Singh Y, Ahmad J, Musarrat J, et al. Emerging importance of holobionts in evolution and in probiotics. Gut Pathog. 2013 May;5(1):12.
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• Antimicrobial activity
• Anticarcinogenic activity
Probiotics
• Anti-inflammatory activity
• Antibiotic-associated diarrhea (AAD)
Intestinal • Inflammatory bowel disease (IBD)
Disease • Crohn’s disease (CD)
Health • Colorectal cancer (CRC)
Intestinal
microbiota
Microbial dysbiosis
• Short-chain fatty acid (SCFA)
• Microbial metabolites
Probiotics possess antimicrobial, anti-inflammatory, and anti-carcinogenic activities which may assist in
recovering unbalanced intestinal microbiota to reduce these intestinal diseases or alleviate their symptoms.
References:
Kim SK, Guevarra RB, Kim YT, et al. Role of probiotics in human gut microbiome-associated diseases. J. Microbiol. Biotechnol. (2019), 29(9), 1335–40.
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40 years Excellent
tolerability and no
Resistant to
commonly used
Absence in normal
resident intestinal flora
Survives the acid
gastric environment,
of clinical use documented antibiotics and the sporogenic activate and reach the
adverse effects activity intestinal tract
Germination Sporulation
Inhibition Proliferation of Serine protease Altered levels of Production of Increase in mucin Other Antibiotic Vitamin Enhance gut Tolerance to
enteropathogens CD4+ T cells activity on pro and lantibiotics secretion and biochemical and resistance synthesis barrier heat, acid,
enterotoxins anti-inflammatory reduction in gut metabolic function salt
cytokines permeability properties
Beneficial effects of B. clausii on intestinal health includes their capacity to relieve gastrointestinal
distress and their immunomodulatory effects.
References:
Ghelardi E, Abreu Y Abreu AT, et al. Current Progress and Future Perspectives on the Use of Bacillus clausii. Microorganisms. 2022 Jun 17;10(6):1246.
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1. Lee YY et al. Gut microbiota in early life and its influence on health and disease: a position paper by the Malaysian Working Group on Gastrointestinal Health. Journal of
paediatrics and child health. 2017 Dec;53(12):1152-8. 2. Acosta-Rodríguez, Abreu Y, Guarner I, et al. Bacillus clausii for Gastrointestinal Disorders: A Narrative Literature Review. Adv
Ther. 2022 Nov;39(11):4854-74.
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References:
Blaabjerg S, et al. Probiotics for the Prevention of Antibiotic-Associated Diarrhea in Outpatients-A Systematic Review and Meta-Analysis. Antibiotics (Basel). 2017 Oct 12;6(4):21.
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INCIDENCE (%)
40
0
Nausea Placebo
Prospective, phase II, uncontrolled Significantly reducing efficacy outcomes of mean duration of diarrhea
study; In adults treatment with one (from 34.8 to 9.3 min/day), frequency of defecation (from 7.0 to 1.8
capsule of B. clausii (2 X 109 CFU) times/day), abdominal pain (from 3.2 [severe] to 0.7 [absent]) and
b.i.d. for 10 days improved stool consistency (from 3.9 [watery] to 1.2 [soft]) (all p < 0.0001).
With no significant changes in safety parameters.
Prospective, phase II study in adults Decrease in mean duration of diarrhea (from 94.2 to 5.8 min/day) and
with acute diarrhea given B. clausii frequency of defecation (from 4.2 to 1.4 times/day).
treatment (one capsule containing 2 Stool consistency also improved (from 2.7 [watery] to 1.6 [soft]), while
X 109 CFU/ml b.i.d. for 7 days) severity of abdominal pain was reduced.
No significant side effects observed.
B. clausii probiotic represent an effective option for alleviating diarrhea symptoms in adult patients.
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Acosta-Rodríguez, Abreu Y, Guarner I, et al. Bacillus clausii for Gastrointestinal Disorders: A Narrative Literature Review. Adv Ther. 2022 Nov;39(11):4854-74.
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Study design: Using a prospective, pre-test/post-test study design, investigated B. clausii as an adjuvant treatment for pediatric IBS. Following 6 weeks of conventional treatment, children (n = 15, aged
6–16 years) then additionally received B. clausii (O/C, N/R, SIN and T; 6 9 109 CFU/day) for 6 weeks.
.
Acosta-Rodríguez, Abreu Y, Guarner I, et al. Bacillus clausii for Gastrointestinal Disorders: A Narrative Literature Review. Adv Ther. 2022 Nov;39(11):4854-74
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Mixture of four B. clausii (O/C,SIN,N/R,T) probiotic strains has protective effects and stimulates various non-immune
mucosal barrier and innate immune system defense mechanisms in a human enterocyte model of RV infection.
References:
Bacillus clausii`s mechanisms to protect the gut microbiome activity and composition after proton-pump inhibitor treatment, using the in vitro SHIME® technology. Poster presented at 54th Annual Meeting of European Society for Pediatric Gastroenterology, Hepatology and Nutrition (ESPGHAN) in Copenhagen, 2022
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lo
o
n
the Human Intestinal
*pr
Christensenellaceae Anaerostipes Prevotellaceae
# hadrus Microbial Ecosystem)
Total SCFA
experiment, an in vitro
Lactobacillaceae Bifidobacteriaceae Streptococcaceae model of GIT was used.
Butyrate Bacillus clausii Ileum* Propionate (SCFA) levels
unaffected by B. Clausii
Enterococcus faecium Lactobacillus reuteri
probiotic, but significantly
Acetate increased due to increase in
Streptococcus bovis
nutrients reaching ileum and
Streptococcus intermedius
colon as a side effect of
omeprazole treatment
*The change in microbial composition was statistically significant (P<0.05) compared to control and also between the experimental treatment arms during the
*Propionate levels
treatment and were not
wash-out affected by Enterogermina supplementation
period
Necrotizing
Randomized, double-blind, placebo-
O/C, SIN, N/R, T enterocolitis and Faster attainment of full feeds
controlled. trial; n = 244
late-onset sepsis
Randomized, single-blind, multi-
Upper respiratory Fewer and shorter duration of
O/C, SIN, N/R, T center, two arm parallel group study;
tract infections infections
n = 80
Reduction in pro-inflammatory
Single-blind, non-controlled study;
O/C, SIN, N/R, T Allergic rhinitis cytokines, higher levels of anti-
n = 10
inflammatory cytokines
Ghelardi E, Abreu Y Abreu AT, et al. Current Progress and Future Perspectives on the Use of Bacillus clausii. Microorganisms. 2022 Jun 17;10(6):1246.
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Aim
• To compare efficacy of 3 single-strain probiotics, Bacillus clausii, Saccharomyces boulardii,
and Lactobacillus rhamnosus GG, as adjuvant therapy along with oral rehydration
solution and zinc supplements in management of acute gastroenteritis.
Study design
• Open label, randomized, comparative study, a total of 150 children (aged 6 months to 16
years) were assigned to 3 groups (50 in each group) of S. boulardii CNCMI-1745, B. clausii
(O/C, N/R, SIN and T) and L. rhamnosus ATCC 15503.
Kesavelu D. Single-Strain Probiotics For The Management Of Acute Diarrhea In Children: A Randomized Comparative Study. Neuro Quantology. September 2022;20(9):5277-83.
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FREQUENCE OF VOMITING
40 38
26
35
Mean duration of diarrhea: 3.19 ±
32
30
32
30
0.65 days, 3.04 ± 0.57 days, and 3.68
30 28 ± 0.35 days in S. boulardii, B. clausii,
26 26
25 and L. rhamnosus groups,
respectively.
20
B. clausii: More efficient in reducing
15
10 duration of vomiting (p = 0.016).
10
6 6 Similar efficacy in reducing loose
5 stool frequency by all 3 probiotics in
0 acute diarrhea
0 1 2 3
References:
Kesavelu D. Single-Strain Probiotics For The Management Of Acute Diarrhea In Children: A Randomized Comparative Study. Neuro Quantology. September 2022;20(9):5277-83.
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100
100
98
100 94
88 88 Stool consistency: On day 5, in S.
84
80
78 boulardii group, only 10% patients
70 68 passed loose stools, while 50%
60 passed normal stools; in B. clausii
50
44 group, 88% and 6% passed normal
40
40
30
36 36 36 and loose stools, respectively; and in
28
26
20
24 26
18
24 L. rhamnosus group, 88%, 26%, 24%
20
10 10 10 12 14 14 passed normal, loose, and
6 6
02 2
0
4
0 0 0 2 0 0 2 semisolid stools, respectively.
0
LOOSE SEMI NORMAL LOOSE SEMI NORMAL LOOSE SEMI
SOLID SOLID NORMAL
STOOL STOOL STOOL SOLID
S. boulardii B. clausii
L. rhamnosus
References:
Kesavelu D. Single-Strain Probiotics For The Management Of Acute Diarrhea In Children: A Randomized Comparative Study. Neuro Quantology. September 2022;20(9):5277-83.
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B. clausii probiotic achieved high efficacy along with good safety profile and should be
strongly recommended as adjuvant therapy in children with acute diarrhea.
References:
Kesavelu D. Single-Strain Probiotics For The Management Of Acute Diarrhea In Children: A Randomized Comparative Study. Neuro Quantology. September 2022;20(9):5277-83.
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Side-effects Diarrhea
Antibiotic-associated diarrhea
De Castro JA et al. Recommendations for the adjuvant use of the poly-antibiotic–resistant probiotic Bacillus clausii (O/C, SIN, N/R, T) in acute, chronic, and antibiotic-associated diarrhea in children: consensus from Asian experts. Trop Dis, Travel Med Vaccines. 2020 Oct;6:21.
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Key Points
Key Points