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Cell signaling Pathways
Cell signaling Pathways
Cell signaling Pathways
A receptor is a molecule that receives chemical signals from outside a cell. When
such chemical signals bind to a receptor, they cause some form of cellular/tissue
response.
• Humans express over 800 GPCRs that make up the third largest family of genes in humans, with roughly half of these GPCRs
dedicated to sensory perception (smell, taste, and vision).
5. peptide hormones,
6. opioids,
G proteins are signal transducers that convey the information that agonist is bound
to the receptor from the receptor to one or more effector proteins. G–protein-
regulated effectors include enzymes such as adenylyl cyclase, phospholipase C,
cyclic GMP phosphodiesterase (PDE6), and membrane ion channels selective for
Ca2+ and K+. In the basal state of the receptor-heterotrimer complex, the α subunit
contains bound GDP and the α-GDP:βγ complex is bound to the un-liganded
receptor
The α subunits fall into four families (Gs, Gi, Gq, and G12/13) which are
responsible for coupling GPCRs to relatively distinct effectors. The Gs α subunit
uniformly activates adenylyl cyclase; the Gi α subunit can inhibit certain isoforms
of adenylyl cyclase; the Gq α subunit activates all forms of phospholipase C; and
the G12/13 α subunits couple to guanine nucleotide exchange factors (GEFs), such
as p115RhoGEF for the small GTP-binding proteins Rho and Rac. The signaling
specificity of the large number of possible βγ combinations is not yet clear;
nonetheless, it is known that K+ channels, Ca2+ channels, and PI-3 kinase (PI3K)
are some of the effectors of free βγ dimer.
Activation by ligand binding of GPCR
Modulation of effectors
G protein activation
Prolonged stimulation of receptor can lead to down regulation of the receptor. This
event is initiated by G protein receptor kinase (GRKs) that phosphorylates the C
terminal tail of the receptor, leading to recruitment of proteins termed arrestin;
arrestin binds to the receptor on internal surface, displacing G proteins and
inhibiting signaling.
SECOND MESSANGERS
Cyclic AMP
Cyclic AMP generated by adenylyl cyclases has three major targets in most cells,
the cyclic AMP dependent protein kinase (PKA), cAMP-regulated guanine
nucleotide exchange factors termed EPACs (exchange factors directly activated by
cAMP), and via PKA phosphorylation, a transcription factor termed CREB (cAMP
response element binding protein).
PKA
The best understood target of cyclic AMP is the PKA holoenzyme consisting of two
catalytic (C) subunits reversibly bound to a regulatory (R) subunit dimer to form a
heterotetramer complex (R2C2). At low concentrations of cAMP, the R subunits
inhibit the C subunits; thus the holoenzyme is inactive. When AC is activated and
cAMP concentrations are increased, four cyclic AMP molecules bind to the R2C2
complex, two to each R subunit, causing a conformational change in the R subunits
that lowers their affinity for the C subunits, causing their activation. The active C
subunits phosphorylate serine and threonine residues on specific protein substrates.
CREB
The small GTP-binding proteins are monomeric GTPases and key regulators of cell
function. For example, many small GTPases are regulated by GEFs. GEFs act by
binding to the GDP-liganded GTPase and catalyzing the exchange of GDP for GTP.
The two GEFs regulated by cAMP are able to activate members of the Ras small
GTPase family, Rap1 and Rap2; these GEFs are termed exchange proteins activated
by cyclic AMP (EPAC-1 and EPAC-2). The EPAC pathway provides an additional
effector system for cAMP signaling and drug action that can act independently or
PDEs hydrolyze the cyclic 3′,5′-phosphodiester bond in cAMP and cGMP, thereby
terminating their action. The enzymes comprise a superfamily with >50 different PDE
proteins divided into 11 subfamilies. The substrate specificities of the different PDEs
include those specific for cAMP hydrolysis, cGMP hydrolysis, and some that hydrolyze
both cyclic nucleotides. PDE3 inhibitor (milrinone) use in heart failure. PDE5 inhibitors
(e.g., sildenafil) are used in treating chronic obstructive pulmonary disease and erectile
dysfunction. By inhibiting PDE5, these drugs increase accumulation of cellular cGMP in
the smooth muscle of the corpus caverosum, thereby enhancing its relaxation and
improving its capacity for engorgement.
Calcium
Calcium is an important messenger in all cells and can regulate diverse responses
including gene expression, contraction, secretion, metabolism, and electrical
activity. The basal Ca2+ level in cells is maintained by membrane Ca2+ pumps that
extrude Ca2+ to the extracellular space and a sarcoplasmic reticulum (SR) Ca2+-
ATPase (SERCA) in the membrane of the endoplasmic reticulum (ER) that
accumulates Ca2+ into its storage site in the ER/SR.
PLCs are cytosolic enzymes that translocate to the plasma membrane upon receptor
stimulation. When activated, they hydrolyze a minor membrane phospholipid,
phosphatidylinositol-4,5-bisphosphate, to generate two intracellular signals,
inositol-1,4,5-trisphosphate (IP3) and the lipid, diacylglycerol (DAG). Both of these
molecules lead to signaling events by activating families of protein kinases.
DAG directly activates members of the protein kinase C (PKC) family. IP3 diffuses
to the ER where it activates the IP3 receptor in the ER membrane causing release of
stored Ca2+ from the ER. Release of Ca2+ from these intracellular stores raises
Ca2+ levels in the cytoplasm many fold within seconds and activates calmodulin
sensitive enzymes. Depending on the cell’s differentiated function, the
Ca2+/calmodulin kinases and PKC may regulate the bulk of the downstream events
in the activated cells. For example, release of the sympathetic transmitter
norepinephrine onto vascular smooth muscle cells stimulates α adrenergic receptors,
activates the Gq-PLC-IP3 pathway, triggers the release of Ca2+, and leads to
contraction by stimulating the Ca2+/calmodulin-sensitive myosin light chain kinase
to phosphorylate the regulatory subunit of the contractile protein, myosin.
Norepinephrine
Calcium released into the cytoplasm from the ER is rapidly removed by plasma
membrane Ca2+ pumps, and the ER pool of Ca2+ is refilled with extracellular Ca2+
flowing through store-operated Ca2+ channels (SOC) in the plasma membrane.
These currents are termed Ca2+ release-activated currents, or ICRAC. The
mechanism by which ER store depletion opens the store-operated channels requires
two proteins, the channel itself, termed Orai1, and an ER sensor termed STIM1.
Orai1 is highly selective for Ca2+. Under resting conditions, the STIM1 protein is
uniformly distributed on the ER membrane. Release of Ca2+ from the ER stores
results in dimerization of STIM1 and movement to the plasma membrane where
STIM1 and Orai1 form clusters, opening the Ca2+ pore of Orai1 and refilling of the
ER Ca2+ pool.
Transmembrane receptors linked to
intracellular enzymes
Receptor tyrosine kinases
The receptor tyrosine kinases include receptors for hormones such as insulin, for
multiple growth factors such EGF, platelet-derived growth factor (PDGF), nerve
growth factor (NGF), fibroblast growth factor (FGF), vascular endothelial growth
factor (VEGF), and ephrins. With the exception of the insulin receptor, which has α
and β chains, these molecules consist of single polypeptide chains with large,
cysteine-rich extracellular domains, short transmembrane domains, and an
intracellular region containing one (or in some cases two) protein tyrosine kinase
domains. Activation of growth factor receptors leads to cell survival, cell
proliferation, and differentiation. Activation of the ephrin receptors leads to
neuronal angiogenesis, axonal migration, and guidance.
In addition to recruiting enzymes, phosphotyrosine-presenting proteins can attract
SH2 domain-containing adaptor molecules without activity such as Grb2, which in
turn attract guanine nucleotide exchange factors (GEFs) that can activate the small
GTP-binding protein, Ras. Activation of members of the Ras family leads in turn to
activation of a protein kinase cascade termed the mitogen-activated protein kinase
(MAP kinase or MAPK) pathway. Activation of the MAPK pathway is one of the
major routes used by growth factor receptors to signal to the nucleus and stimulate
cell growth. The first enzyme in the pathway is Rap which is a MAP kinase kinase
kinase (MKKK). Rap phosphorylates and activates a MAP kinase kinase (MKK)
termed MEK. MEK phosphorylates a MAP klnase termed ERK. ERK
phosphorylates a number of transcription factors in the nucleus, including Elk-1 and
CREB, to regulate gene transcription and cause cell proliferation
Spontaneous activating mutations in Ras are responsible for a large fraction of
human cancers; thus, molecules that inhibit Ras are of great interest in cancer
chemotherapy. Drugs that act at receptors in this diverse family include insulin for
the treatment of diabetes mellitus and imatinib, a small molecule protein kinase
Imatinib is used to treat chronic myelogenous leukemia and several solid tumors
The mechanism of action of tumor necrosis factor α (TNF-α) signaling to the NF-
κB transcription factors is very similar to that used by Toll-like receptors in that the
intracellular domain of the receptor has no enzymatic activity. The TNF-α receptor
is another single membrane-spanning receptor with an extracellular ligand-binding
domain, a transmembrane domain, and a cytoplasmic domain termed the death
domain.
TNF-α binds a complex composed of TNF-receptor1 and TNF-receptor2. Upon
trimerization, the death domains bind the adaptor protein TRADD, which recruits
the receptor interacting protein 1 (RIP1) to form a receptor-adaptor complex at the
membrane. RIP1 is poly-ubiquinated, resulting in recruitment of the TAK1 kinase
and the IκB kinase (IKK) complex to the ubiquinated molecules. The activation
loop of IKK is phosphorylated in the complex eventually resulting in IκBα being
released from the complex allowing the p50/p65 heterodimer of the complex to
translocate to the nucleus and activate the transcription of inflammatory genes.
While there currently are no drugs that interdict the cytoplasmic portions of the
TNF-α signaling pathway, humanized monoclonal antibodies to TNF-α itself, such
as infiximab and adalimumab, are important for the treatment of rheumatoid
arthritis andCrohn’s disease
Receptors That Stimulate Synthesis of cGMP
Nitric oxide (NO) is a unique signal, a very labile gas produced locally in cells by
the enzyme nitric oxide synthase (NOS); the resulting NO is able to markedly
stimulate the soluble form of guanylate cyclase to produce cyclic GMP. There are
three forms of nitric oxide synthase, neuronal NOS (nNOS or NOS1), endothelial
NOS (eNOS or NOS3), and inducible NOS (iNOS or NOS2).
NOS produces NO by catalyzing the oxidation of the guanido nitrogen of L-
arginine, producing L-citrulline and NO. The enzymes require co-factors including
tetrahydrobioptern and calmodulin. The nNOS and eNOS forms of the enzyme are
markedly activated by Ca2+/calmodulin; the inducible form is less sensitive to
Ca2+ but the level of iNOS protein in cells can be increased over 1000-fold by
inflammatory stimuli such as endotoxin, TNF-α, interleukin-1β and interferon-γ.
The ability of Ca2+ to activate eNOS and nNOS is important in certain cells where
neurotransmitters that open Ca2+ channels or activate PLC can relax smooth
muscle. An example is the ability of ACh released by the parasympathetic nervous
system to relax sphincters. Soluble guanylate cyclase is a heterodimer composed of
α and β subunits.
Nuclear hormone receptors and
transcription factors
• These receptor proteins are transcription factors able to regulate the expression of
genes controlling numerous physiological processes such as reproduction,
development and metabolism. It comprises of a superfamily of 48 receptors. Well
known members of family include the receptor for steroid hormones such as
androgens, estrogen, glucocorticoid , thyroid hormone and vitamin D. Other
members of family are the receptors for a diverse group of fatty acids, bile acids,
lipid and lipid metabolite. For example; Liver X receptror (LXR), farnesoid X
receptors and peroxisome proliferator-activated receptors (PPAR).
Nuclear hormone receptors contain four major domain in a single polypeptide chain.
The N terminal domain can contain an activation region (AF) essential for
transcriptional regulation followed by a very conserved region with two zinc zingers
that bind to DNA (DNA binding domain). AF region is subject to regulation by
phosphorylation and other mechanisms that stimulate or inhibit the overall ability of
the nuclear receptor to activate the transcription. Hormone response element (HRE)
is a part of DNA specific for binding of particular nuclear receptor. For proper
functioning, a receptor must bind with a ligand, HRE and a co-regulator (to regulate
the target gene).Co-regulator are of following types;